View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11980_low_125 (Length: 203)
Name: NF11980_low_125
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11980_low_125 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 13017335 - 13017483
Alignment:
| Q |
39 |
ttgaaaaggagcatattcaaggtcccaagccagttaatacaagttattcagtgttaattttgaattttgtaggataagagatacagagtcaaaaccaatt |
138 |
Q |
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| T |
13017335 |
ttgaaaaggagcatattcaaggtcccaagccagttaataccagttattcagtgttaattttgaattttgtaggataagagataca-agtcaaaaccaatt |
13017433 |
T |
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| Q |
139 |
atatacattgattattttgatacaatatcaccaaccattataggaacaac |
188 |
Q |
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| T |
13017434 |
atatacattgattattttgatacaatatcaccaaccattataggaacaac |
13017483 |
T |
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