View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11980_low_4 (Length: 707)

Name: NF11980_low_4
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11980_low_4
NF11980_low_4
[»] chr6 (49 HSPs)
chr6 (360-700)||(33041473-33041798)
chr6 (407-596)||(33235996-33236192)
chr6 (360-595)||(9719034-9719271)
chr6 (359-596)||(30487308-30487547)
chr6 (356-593)||(19278039-19278282)
chr6 (408-601)||(1390365-1390566)
chr6 (360-596)||(9721140-9721378)
chr6 (422-595)||(5585304-5585486)
chr6 (360-596)||(14515476-14515713)
chr6 (359-551)||(4097559-4097755)
chr6 (481-596)||(10818343-10818458)
chr6 (424-601)||(34176397-34176581)
chr6 (359-553)||(21606889-21607086)
chr6 (359-549)||(31849112-31849305)
chr6 (397-596)||(1300654-1300862)
chr6 (419-546)||(10348850-10348986)
chr6 (397-596)||(16737998-16738205)
chr6 (402-474)||(2893670-2893742)
chr6 (408-552)||(2892650-2892801)
chr6 (213-296)||(33040656-33040739)
chr6 (360-474)||(12811112-12811221)
chr6 (420-525)||(13583777-13583890)
chr6 (482-553)||(2900038-2900109)
chr6 (403-474)||(6034204-6034275)
chr6 (400-595)||(26318343-26318546)
chr6 (399-596)||(665843-666054)
chr6 (418-552)||(1395691-1395834)
chr6 (360-434)||(9721141-9721210)
chr6 (527-596)||(10818231-10818300)
chr6 (383-456)||(9298636-9298709)
chr6 (360-449)||(10818232-10818316)
chr6 (494-553)||(9298625-9298685)
chr6 (527-595)||(19278211-19278278)
chr6 (360-552)||(30849960-30850153)
chr6 (399-551)||(2892890-2893053)
chr6 (419-474)||(14548738-14548793)
chr6 (499-549)||(7775996-7776046)
chr6 (360-434)||(9719034-9719103)
chr6 (527-596)||(14515475-14515544)
chr6 (431-513)||(25741476-25741566)
chr6 (397-439)||(1300787-1300829)
chr6 (396-434)||(10818388-10818426)
chr6 (525-590)||(23091129-23091195)
chr6 (504-553)||(31799070-31799120)
chr6 (530-595)||(21607020-21607085)
chr6 (527-595)||(4097686-4097754)
chr6 (397-433)||(21606879-21606915)
chr6 (556-596)||(23090997-23091037)
chr6 (360-400)||(23090998-23091038)
[»] chr3 (54 HSPs)
chr3 (360-601)||(41110318-41110562)
chr3 (396-596)||(24560251-24560459)
chr3 (391-577)||(25654991-25655187)
chr3 (359-601)||(18654597-18654843)
chr3 (391-553)||(220442-220612)
chr3 (413-578)||(52473966-52474139)
chr3 (404-553)||(30200133-30200293)
chr3 (397-553)||(37102194-37102358)
chr3 (363-553)||(21773788-21773981)
chr3 (403-601)||(41039947-41040153)
chr3 (397-579)||(46556178-46556369)
chr3 (396-592)||(27541937-27542141)
chr3 (393-547)||(9312522-9312687)
chr3 (437-596)||(36568906-36569072)
chr3 (436-596)||(16275707-16275875)
chr3 (396-541)||(2387817-2387970)
chr3 (493-595)||(28581189-28581291)
chr3 (413-594)||(37807131-37807321)
chr3 (402-472)||(651771-651841)
chr3 (419-594)||(10748299-10748484)
chr3 (407-474)||(46204931-46204998)
chr3 (408-474)||(14898022-14898088)
chr3 (396-474)||(28582641-28582719)
chr3 (403-535)||(43005804-43005942)
chr3 (360-474)||(6803333-6803442)
chr3 (407-547)||(52185060-52185207)
chr3 (414-547)||(55327422-55327563)
chr3 (407-474)||(54574493-54574560)
chr3 (376-595)||(40463874-40464096)
chr3 (527-596)||(34641163-34641232)
chr3 (363-468)||(10943752-10943852)
chr3 (504-595)||(17474209-17474301)
chr3 (527-602)||(24253895-24253970)
chr3 (509-601)||(26135952-26136044)
chr3 (438-474)||(31684362-31684398)
chr3 (530-593)||(14897981-14898044)
chr3 (527-601)||(220570-220644)
chr3 (504-594)||(17474356-17474446)
chr3 (527-577)||(28582682-28582732)
chr3 (527-596)||(41110494-41110563)
chr3 (361-468)||(12790377-12790478)
chr3 (438-474)||(31894020-31894056)
chr3 (402-474)||(37236963-37237034)
chr3 (509-596)||(13082856-13082943)
chr3 (527-594)||(55428552-55428619)
chr3 (514-596)||(23028086-23028168)
chr3 (530-595)||(6803377-6803442)
chr3 (527-592)||(21773788-21773853)
chr3 (527-596)||(24560219-24560288)
chr3 (397-434)||(30200123-30200160)
chr3 (397-434)||(37102184-37102221)
chr3 (396-433)||(52474088-52474125)
chr3 (527-575)||(30200264-30200312)
chr3 (360-400)||(42772047-42772087)
[»] chr2 (52 HSPs)
chr2 (360-596)||(36347543-36347782)
chr2 (397-596)||(23748130-23748337)
chr2 (362-598)||(8426879-8427110)
chr2 (396-559)||(15224733-15224904)
chr2 (360-596)||(36046206-36046442)
chr2 (408-553)||(39732774-39732926)
chr2 (397-596)||(19566822-19567030)
chr2 (397-553)||(39821704-39821868)
chr2 (419-555)||(16565832-16565978)
chr2 (357-574)||(36566874-36567096)
chr2 (419-596)||(40022427-40022615)
chr2 (393-592)||(12541796-12541999)
chr2 (482-596)||(34209592-34209706)
chr2 (407-541)||(28262500-28262642)
chr2 (393-595)||(31795772-31795982)
chr2 (407-553)||(7681293-7681443)
chr2 (482-596)||(9631688-9631802)
chr2 (408-559)||(29525768-29525931)
chr2 (482-553)||(27926681-27926752)
chr2 (360-470)||(35736178-35736283)
chr2 (360-547)||(9426988-9427179)
chr2 (482-553)||(42316809-42316880)
chr2 (447-536)||(17379897-17379994)
chr2 (499-549)||(1583222-1583272)
chr2 (423-514)||(2241471-2241570)
chr2 (413-542)||(37739949-37740085)
chr2 (419-468)||(9591973-9592022)
chr2 (527-596)||(36347714-36347783)
chr2 (504-596)||(35736337-35736429)
chr2 (505-596)||(887261-887351)
chr2 (402-473)||(41841722-41841793)
chr2 (504-602)||(45257456-45257555)
chr2 (408-474)||(6721754-6721820)
chr2 (530-598)||(9426985-9427053)
chr2 (528-596)||(15224868-15224936)
chr2 (520-596)||(17380007-17380083)
chr2 (529-596)||(34187577-34187644)
chr2 (396-474)||(41778807-41778885)
chr2 (527-604)||(39732901-39732978)
chr2 (407-463)||(27926613-27926669)
chr2 (534-593)||(8427051-8427110)
chr2 (527-602)||(22356177-22356252)
chr2 (529-596)||(31061361-31061428)
chr2 (527-601)||(35736172-35736246)
chr2 (360-434)||(36046207-36046276)
chr2 (402-541)||(39354231-39354378)
chr2 (402-474)||(886958-887028)
chr2 (419-468)||(2381125-2381174)
chr2 (503-596)||(16713494-16713587)
chr2 (435-472)||(32503232-32503269)
chr2 (527-596)||(36046375-36046443)
chr2 (530-602)||(41841678-41841750)
[»] chr4 (54 HSPs)
chr4 (360-596)||(54935070-54935311)
chr4 (16-214)||(11960615-11960817)
chr4 (403-596)||(27735786-27735987)
chr4 (419-596)||(45741947-45742132)
chr4 (360-579)||(31348340-31348562)
chr4 (359-601)||(5730827-5731073)
chr4 (360-602)||(37711141-37711371)
chr4 (402-596)||(54320474-54320676)
chr4 (406-596)||(49735470-49735668)
chr4 (414-596)||(41174397-41174587)
chr4 (414-590)||(35248738-35248922)
chr4 (360-535)||(26166940-26167118)
chr4 (360-572)||(1968377-1968600)
chr4 (359-553)||(46007744-46007943)
chr4 (414-596)||(24565348-24565536)
chr4 (407-584)||(6891405-6891590)
chr4 (423-552)||(36151637-36151773)
chr4 (396-553)||(47433754-47433919)
chr4 (501-596)||(6938394-6938489)
chr4 (433-541)||(16400871-16400987)
chr4 (396-590)||(17938115-17938318)
chr4 (360-547)||(29798291-29798478)
chr4 (482-553)||(34110933-34111003)
chr4 (408-553)||(44784038-44784190)
chr4 (360-578)||(21694910-21695129)
chr4 (432-577)||(22659268-22659413)
chr4 (360-547)||(2247854-2248042)
chr4 (527-596)||(31348494-31348563)
chr4 (406-578)||(45132517-45132695)
chr4 (408-553)||(28332850-28333003)
chr4 (360-468)||(56135752-56135855)
chr4 (419-474)||(2917095-2917150)
chr4 (479-553)||(36278376-36278450)
chr4 (527-596)||(1968532-1968601)
chr4 (527-594)||(27735749-27735816)
chr4 (532-595)||(46007879-46007942)
chr4 (525-603)||(2247972-2248050)
chr4 (360-434)||(54935241-54935310)
chr4 (394-593)||(55510202-55510407)
chr4 (527-596)||(45132668-45132737)
chr4 (510-551)||(45911327-45911368)
chr4 (527-596)||(54576329-54576398)
chr4 (529-596)||(54935069-54935137)
chr4 (413-473)||(31719966-31720028)
chr4 (402-448)||(2247843-2247889)
chr4 (403-441)||(6938322-6938360)
chr4 (404-450)||(27735901-27735947)
chr4 (530-596)||(47433885-47433951)
chr4 (531-601)||(47846233-47846303)
chr4 (360-434)||(49735471-49735540)
chr4 (414-474)||(22921033-22921094)
chr4 (414-474)||(22970705-22970766)
chr4 (419-468)||(34995108-34995157)
chr4 (508-596)||(37761467-37761555)
[»] chr1 (53 HSPs)
chr1 (397-594)||(8529834-8530039)
chr1 (404-596)||(40094935-40095136)
chr1 (360-596)||(30010335-30010574)
chr1 (360-601)||(12234013-12234257)
chr1 (359-601)||(38509891-38510136)
chr1 (360-601)||(41498407-41498652)
chr1 (364-596)||(2858934-2859169)
chr1 (360-550)||(32951366-32951559)
chr1 (360-596)||(35349468-35349703)
chr1 (397-546)||(50744332-50744490)
chr1 (361-552)||(51597672-51597866)
chr1 (402-553)||(10391912-10392072)
chr1 (403-553)||(49946633-49946791)
chr1 (398-553)||(6563614-6563775)
chr1 (407-544)||(45585739-45585884)
chr1 (482-601)||(43551993-43552108)
chr1 (360-455)||(26324017-26324112)
chr1 (482-595)||(20576136-20576247)
chr1 (482-595)||(7444623-7444736)
chr1 (413-567)||(26940874-26941036)
chr1 (439-553)||(36285619-36285741)
chr1 (483-602)||(28770852-28770969)
chr1 (527-602)||(32951491-32951566)
chr1 (482-553)||(40964726-40964798)
chr1 (414-474)||(44211037-44211097)
chr1 (397-474)||(2470867-2470944)
chr1 (446-553)||(41676363-41676480)
chr1 (408-468)||(43553068-43553129)
chr1 (527-591)||(2859105-2859169)
chr1 (534-601)||(23536777-23536844)
chr1 (527-601)||(35349635-35349709)
chr1 (527-596)||(30010334-30010403)
chr1 (531-596)||(41498406-41498471)
chr1 (509-601)||(2470727-2470819)
chr1 (504-596)||(2506689-2506781)
chr1 (402-450)||(41676437-41676485)
chr1 (531-594)||(35512974-35513037)
chr1 (527-577)||(10391893-10391943)
chr1 (527-609)||(12233999-12234081)
chr1 (360-434)||(12234182-12234251)
chr1 (396-434)||(38509928-38509966)
chr1 (419-468)||(1085628-1085677)
chr1 (547-596)||(20607410-20607459)
chr1 (527-600)||(25268437-25268510)
chr1 (499-596)||(40709294-40709391)
chr1 (403-456)||(49946629-49946682)
chr1 (527-595)||(7444481-7444549)
chr1 (402-434)||(35349504-35349536)
chr1 (527-595)||(38510067-38510135)
chr1 (402-434)||(40094973-40095005)
chr1 (403-431)||(43552037-43552065)
chr1 (398-474)||(49832583-49832659)
chr1 (151-215)||(50135026-50135090)
[»] chr5 (60 HSPs)
chr5 (360-596)||(13634714-13634953)
chr5 (387-601)||(7544161-7544383)
chr5 (396-601)||(10650463-10650661)
chr5 (391-596)||(26414922-26415136)
chr5 (360-596)||(16938482-16938721)
chr5 (424-596)||(8502837-8503017)
chr5 (397-593)||(36363067-36363271)
chr5 (403-596)||(28279478-28279680)
chr5 (397-546)||(9856915-9857072)
chr5 (396-596)||(37606929-37607136)
chr5 (402-553)||(4373611-4373770)
chr5 (403-601)||(10476067-10476275)
chr5 (408-595)||(9798615-9798810)
chr5 (362-553)||(36392195-36392388)
chr5 (408-553)||(10072692-10072845)
chr5 (396-596)||(37779139-37779345)
chr5 (496-596)||(1657955-1658055)
chr5 (16-188)||(39984476-39984654)
chr5 (482-596)||(14245090-14245204)
chr5 (407-596)||(37551453-37551647)
chr5 (407-596)||(37654283-37654477)
chr5 (393-547)||(20146917-20147088)
chr5 (360-552)||(16501836-16502033)
chr5 (361-553)||(2550397-2550592)
chr5 (419-474)||(22022907-22022962)
chr5 (482-552)||(20513491-20513561)
chr5 (482-553)||(43535-43607)
chr5 (402-472)||(11756917-11756987)
chr5 (437-552)||(17024270-17024393)
chr5 (482-553)||(22023495-22023568)
chr5 (482-553)||(32727822-32727893)
chr5 (419-519)||(42681510-42681618)
chr5 (510-596)||(14245202-14245288)
chr5 (407-464)||(11419303-11419360)
chr5 (413-474)||(14681520-14681581)
chr5 (360-474)||(40815300-40815408)
chr5 (521-595)||(11757070-11757144)
chr5 (408-474)||(39966084-39966150)
chr5 (527-596)||(13634713-13634782)
chr5 (493-553)||(17780279-17780340)
chr5 (527-596)||(26414895-26414964)
chr5 (479-547)||(4423336-4423404)
chr5 (510-598)||(10650427-10650517)
chr5 (529-596)||(34980812-34980879)
chr5 (360-450)||(1657969-1658054)
chr5 (360-434)||(14245218-14245287)
chr5 (488-553)||(11419237-11419302)
chr5 (505-553)||(2556167-2556215)
chr5 (360-468)||(34980813-34980916)
chr5 (396-466)||(43410-43481)
chr5 (535-594)||(2550533-2550592)
chr5 (398-474)||(14684614-14684692)
chr5 (482-553)||(29002251-29002322)
chr5 (360-398)||(8551621-8551659)
chr5 (534-596)||(10476028-10476090)
chr5 (358-400)||(12600703-12600745)
chr5 (531-601)||(33744190-33744260)
chr5 (530-596)||(40815299-40815365)
chr5 (527-596)||(16938481-16938550)
chr5 (392-472)||(13298296-13298376)
[»] chr8 (50 HSPs)
chr8 (396-592)||(31543078-31543282)
chr8 (391-590)||(11575415-11575621)
chr8 (402-595)||(16652989-16653190)
chr8 (397-596)||(11785561-11785768)
chr8 (403-552)||(1281184-1281341)
chr8 (376-596)||(31738442-31738665)
chr8 (387-553)||(1026894-1027067)
chr8 (393-553)||(7502999-7503167)
chr8 (360-594)||(30479721-30479958)
chr8 (407-602)||(3726859-3727054)
chr8 (399-553)||(29358385-29358547)
chr8 (408-559)||(30664407-30664566)
chr8 (396-554)||(7979174-7979340)
chr8 (488-596)||(34634277-34634385)
chr8 (396-592)||(36308876-36309081)
chr8 (419-547)||(6315119-6315255)
chr8 (404-553)||(37923123-37923280)
chr8 (400-595)||(11033455-11033659)
chr8 (360-547)||(9718530-9718720)
chr8 (402-536)||(37032419-37032561)
chr8 (360-568)||(2248455-2248666)
chr8 (403-596)||(41103506-41103709)
chr8 (412-546)||(28083792-28083934)
chr8 (482-595)||(29690925-29691038)
chr8 (407-596)||(40990183-40990383)
chr8 (402-474)||(42650468-42650540)
chr8 (360-553)||(4247563-4247761)
chr8 (527-596)||(43732860-43732929)
chr8 (491-578)||(10028259-10028347)
chr8 (402-514)||(33922560-33922680)
chr8 (408-474)||(10028156-10028222)
chr8 (413-552)||(13405027-13405178)
chr8 (531-605)||(9718656-9718730)
chr8 (527-592)||(1281149-1281214)
chr8 (527-595)||(16024327-16024394)
chr8 (531-601)||(31543249-31543319)
chr8 (491-525)||(35694828-35694862)
chr8 (419-468)||(12022281-12022330)
chr8 (528-596)||(2248454-2248522)
chr8 (529-596)||(8815316-8815383)
chr8 (481-596)||(24243052-24243164)
chr8 (396-434)||(3726897-3726935)
chr8 (505-551)||(5562012-5562058)
chr8 (529-594)||(7394636-7394701)
chr8 (509-602)||(30365126-30365219)
chr8 (396-433)||(31543106-31543143)
chr8 (413-474)||(38198181-38198241)
chr8 (505-538)||(42919879-42919912)
chr8 (526-602)||(7503126-7503202)
chr8 (530-594)||(11575582-11575646)
[»] chr7 (57 HSPs)
chr7 (396-596)||(41496959-41497167)
chr7 (359-553)||(33655153-33655350)
chr7 (407-577)||(24970187-24970364)
chr7 (396-596)||(47390889-47391098)
chr7 (406-596)||(40196534-40196732)
chr7 (397-552)||(34235053-34235219)
chr7 (404-595)||(42306376-42306571)
chr7 (360-601)||(13770945-13771187)
chr7 (360-578)||(25887195-25887417)
chr7 (360-578)||(1051520-1051739)
chr7 (402-595)||(43230276-43230476)
chr7 (482-596)||(18231714-18231828)
chr7 (482-592)||(4833537-4833647)
chr7 (363-601)||(41008188-41008425)
chr7 (427-596)||(45940658-45940835)
chr7 (360-470)||(39856001-39856106)
chr7 (397-551)||(17852906-17853067)
chr7 (391-552)||(34228364-34228534)
chr7 (419-546)||(40572287-40572421)
chr7 (482-593)||(10315761-10315872)
chr7 (397-525)||(37417706-37417842)
chr7 (482-553)||(32872826-32872897)
chr7 (482-596)||(13425122-13425236)
chr7 (443-541)||(22163167-22163272)
chr7 (443-541)||(22221875-22221980)
chr7 (359-595)||(26365769-26366009)
chr7 (360-474)||(31571600-31571711)
chr7 (510-596)||(48881560-48881646)
chr7 (403-460)||(23029480-23029537)
chr7 (527-596)||(39856038-39856107)
chr7 (516-596)||(36267555-36267635)
chr7 (408-547)||(42087041-42087188)
chr7 (527-596)||(31571643-31571712)
chr7 (397-461)||(10315648-10315712)
chr7 (483-551)||(19835838-19835906)
chr7 (493-601)||(31553182-31553287)
chr7 (419-596)||(33519105-33519290)
chr7 (482-542)||(47229888-47229948)
chr7 (414-474)||(48152036-48152092)
chr7 (527-596)||(13771119-13771188)
chr7 (527-596)||(28074105-28074174)
chr7 (479-596)||(30592255-30592372)
chr7 (527-596)||(34228492-34228561)
chr7 (413-482)||(38378096-38378165)
chr7 (396-449)||(40196566-40196619)
chr7 (504-551)||(2087786-2087833)
chr7 (514-553)||(30891039-30891078)
chr7 (529-596)||(37925843-37925910)
chr7 (531-601)||(47390852-47390922)
chr7 (418-468)||(48013558-48013608)
chr7 (413-474)||(18795727-18795788)
chr7 (360-401)||(28074106-28074147)
chr7 (402-434)||(33655148-33655180)
chr7 (531-595)||(33655285-33655349)
chr7 (526-554)||(34235180-34235208)
chr7 (360-468)||(37925844-37925947)
chr7 (63-142)||(45843043-45843123)
[»] scaffold0067 (3 HSPs)
scaffold0067 (396-602)||(39182-39400)
scaffold0067 (527-596)||(39363-39432)
scaffold0067 (360-434)||(39189-39259)
[»] scaffold0262 (1 HSPs)
scaffold0262 (402-592)||(16302-16500)
[»] scaffold0171 (1 HSPs)
scaffold0171 (407-577)||(15995-16173)
[»] scaffold0096 (2 HSPs)
scaffold0096 (391-551)||(6613-6780)
scaffold0096 (530-601)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (398-553)||(18807-18968)
[»] scaffold0294 (1 HSPs)
scaffold0294 (419-599)||(15320-15507)
[»] scaffold0026 (2 HSPs)
scaffold0026 (359-559)||(1174-1377)
scaffold0026 (527-595)||(1175-1243)
[»] scaffold0198 (1 HSPs)
scaffold0198 (510-595)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (504-594)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (530-596)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (531-594)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 360 - 700
Target Start/End: Original strand, 33041473 - 33041798
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||| |||||| ||| ||||  |||||||||      ||||||||||||||||||||||  ||||||||||  ||||||| ||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaa-----tttatttttcatttttaaattatagactatataatgtgtttttttaaaataa 33041567  T
Q  460 attaagtgtgattgaggtgttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 559  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||           
T  33041568 attaagtgtgattgaagtgttatttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaat------ 33041661  T
Q  560 atcccttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaagtaactcaaactaaatgagacaatgaaacattactctcaccaca 659  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  33041662 ----cttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaggtaactcaaactaaatgagacaatgaaacattactctcaccata 33041757  T
Q  660 actaaataacaccaagtaagttcacaatattaatgtctgtg 700  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33041758 actaaataacaccaagtaagttcacaatattaatgtctgtg 33041798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 407 - 596
Target Start/End: Original strand, 33235996 - 33236192
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 498  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |  ||||        ||||||||||||||||    
T  33235996 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatg 33236095  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |  |||| ||| |||| ||| |||||| |||||||||| |||||    
T  33236096 ttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctccatccaaatacacc 33236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 360 - 595
Target Start/End: Complemental strand, 9719271 - 9719034
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  ||||||||||||||||||||||| |     |||||| ||||| |||||||||| |||||||||||||||| |||| |||| |||    
T  9719271 gtgtgtttggattgagggtttatgaggggaagagaggggtg-----ggtttaattttcttttttaaattccggactatataacatgctttt-taaattaa 9719178  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||| ||||||||||| || ||||        ||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||    
T  9719177 atttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataa 9719078  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |   |||| ||||||||||||||||||  || ||||||||||||    
T  9719077 atcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 359 - 596
Target Start/End: Complemental strand, 30487547 - 30487308
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    ||||||||| |||||  |||||| |||||||||     |||| |||||||||| ||||  |||||||| ||||||||||||||||||||||| |||||||    
T  30487547 agtgtgtttcgattgagggtttaggaggggaag-----ggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaata 30487453  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||| |||||||||||| || ||||        |||||||||||||||||| ||||||||||| | |||||||| | ||| |||||||| ||||||||||     
T  30487452 aatcaagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtg 30487354  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||  |||| ||||||||||||||||||  ||||||||||||||||    
T  30487353 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 30487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 356 - 593
Target Start/End: Complemental strand, 19278282 - 19278039
Alignment:
Q  356 ttaagtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa 455  Q
    ||||||||||||||||||   ||||| ||||||||| ||||||||     |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19278282 ttaagtgtgtttggattgagagtttaggaggggaagggaggggag-----ggtttatttt-cttttttaaattacggactatataacatgtttttctaaa 19278189  T
Q  456 ataaattaagtgtgattgaggtgtta--------tttatcatgtta----atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatg 543  Q
    ||||||| ||| ||||||| || | |        ||||||||||||    |||||| ||||||||||||||||||| ||||| || ||||||||||||||    
T  19278188 ataaatttagtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatg 19278089  T
Q  544 aaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    ||||||||||  || | | ||||||||||||||||  |||||||||||||    
T  19278088 aaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 408 - 601
Target Start/End: Original strand, 1390365 - 1390566
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgttt-ttctaaaataaattaagtgtgattgaggtgttatt-------tatcatgttaatatgt 499  Q
    |||| ||||| |||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||  | |||||       ||||||||||||||||    
T  1390365 tttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattattgatcatttatcatgttaatatgt 1390464  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccata 599  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||    | | ||| ||||||||||||||  | |||||||||||||| ||    
T  1390465 taactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaacccttcatccaaacacacctta 1390564  T
Q  600 aa 601  Q
    ||    
T  1390565 aa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 360 - 596
Target Start/End: Complemental strand, 9721378 - 9721140
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||| ||||  ||||||||| || |||||||||| |     |||||| ||||| |||||||||| ||||| ||||||||||||||| |||| |||    
T  9721378 gtgtgtttgaattgagggtttatgaaggtaagagaggggtg-----ggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaa 9721285  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    | | ||||||||||| || ||||        ||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||    
T  9721284 agttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataa 9721185  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  |||| |||||||||||||||||| ||| |||||||||||||    
T  9721184 accctcccctcccttcccctcctaaaccttcaatccaaacacacc 9721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 422 - 595
Target Start/End: Complemental strand, 5585486 - 5585304
Alignment:
Q  422 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaa 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |        |||| |||||||||||||| |||||||||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  514 atatttcatagtatccgtaatttaaaaatg-aaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    | |||||||||| | ||||||||||||| | ||||||||||  | |||| ||||||||||||||||  |||||||||||||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 360 - 596
Target Start/End: Original strand, 14515476 - 14515713
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||| |||||||||||||||||| ||||  ||||| ||||||||||    
T  14515476 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaataa 14515568  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||||||||||| ||| || ||||        |||||||||| ||||||||||| || ||||||||||| ||||| | | ||||||||||||||||  |||    
T  14515569 attaagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaa 14515668  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  |||| | ||||||||||||||||  ||||||||||||||||    
T  14515669 accctccctttccttcccctcctaaaccctccatccaaacacacc 14515713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 551
Target Start/End: Complemental strand, 4097755 - 4097559
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaat 457  Q
    |||||||||||||||  |||||| ||||||||| ||||| ||     |||| | ||||| |||||||||||||||| ||||||||| ||||| | |||||    
T  4097755 agtgtgtttggattgagggtttaagaggggaagggagggaag-----ggttcacttttcttttttaaattacggacaatataacattttttttccaaaat 4097661  T
Q  458 aaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 549  Q
    ||||||||||||||||| || ||||        |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||    
T  4097660 aaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagt 4097561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 481 - 596
Target Start/End: Original strand, 10818343 - 10818458
Alignment:
Q  481 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 580  Q
    ||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||  |||| ||||| |||||||||||||     
T  10818343 atttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactc 10818442  T
Q  581 tccatccaaacacacc 596  Q
    || |||||||||||||    
T  10818443 tcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 424 - 601
Target Start/End: Original strand, 34176397 - 34176581
Alignment:
Q  424 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaat 515  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||  || ||||        |||| |||||||||||||||||||  |||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  516 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccct-tcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||||||||| ||||||||||||||||||||| |||||  || |||| || | ||||| |||||  |||||||||||||||||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaac--tctcatctctcttccctcataaaccctccatccaaacacaccataaa 34176581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 553
Target Start/End: Complemental strand, 21607086 - 21606889
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||||  |||||| |||||||||||||     | ||  |||||  |||| ||||||||||||  ||||||| | ||||||||||||||||    
T  21607086 agtgtgtttggattgagggtttaggaggggaagagag-----atgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaata 21606992  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||| |||||||| ||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  21606991 aataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagta 21606892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 549
Target Start/End: Original strand, 31849112 - 31849305
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||| ||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||    
T  31849112 agtgtgttaggattgagggtttaagaggggaagggaggggag-----ggtttagttttcttttttaaactacagactatataacatatttttctaaaata 31849206  T
Q  459 aattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 549  Q
    ||| |||||||||||| || |||        ||||||| ||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||    
T  31849207 aatcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagt 31849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 596
Target Start/End: Original strand, 1300654 - 1300862
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa-ataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    |||| |||||||||| |||   ||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||| || ||||        |||||    
T  1300654 ggaggggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatc 1300753  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    | |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||  |||| ||| |||  || | ||||  |||||||    
T  1300754 aggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatcc 1300853  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  1300854 aaacacacc 1300862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 419 - 546
Target Start/End: Complemental strand, 10348986 - 10348850
Alignment:
Q  419 tttttaaattacggactatataacatgtttttct-aaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaacttttta 509  Q
    |||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||| || ||||        ||||| | |||||||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  10348886 aaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 596
Target Start/End: Complemental strand, 16738205 - 16737998
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattt--------atca 488  Q
    |||| |||| ||||| ||||| |||||||||||| || ||||||| |||||||||||||||||| ||||||| ||| | || |||| |        ||||    
T  16738205 ggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgatcgtatatca 16738106  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 588  Q
    ||||| ||| |||| || | |||||| |||||||||| ||| ||||||||||| ||||||||||  ||||| || ||||| ||| |||||  ||||||||    
T  16738105 tgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatcca 16738006  T
Q  589 aacacacc 596  Q
    ||||||||    
T  16738005 aacacacc 16737998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 402 - 474
Target Start/End: Original strand, 2893670 - 2893742
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  2893670 ggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaagtgtgattga 2893742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 408 - 552
Target Start/End: Complemental strand, 2892801 - 2892650
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 499  Q
    |||| ||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||  | |||        |||||||||||| ||| |    
T  2892801 tttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattt 2892702  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    ||| |||||||||||||| ||||||| | |||||||||| ||  |||||||||    
T  2892701 taa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaa 2892650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 33040656 - 33040739
Alignment:
Q  213 ttttattttcgatcaaacttatctcttcctcatgccaactcaaacaataatgtaaataggaaagtcatactgtgttaaagacta 296  Q
    ||||| |||| ||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| || ||||||||||||    
T  33040656 ttttagtttccatcaaacttatctcttcctcatatcaattcaaacaataatgtaaataggaaagacatgctatgttaaagacta 33040739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 360 - 474
Target Start/End: Complemental strand, 12811221 - 12811112
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| || |||||||||||||||     || ||| ||||| | |||||||||  |||||||||| |||||||||||||||||    
T  12811221 gtgtgtttggattgagggtttaggatgggaagagaggggag-----ggattacttttcttctttaaattagagactatataatatgtttttctaaaataa 12811127  T
Q  460 attaagtgtgattga 474  Q
    |||||||||||||||    
T  12811126 attaagtgtgattga 12811112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 525
Target Start/End: Original strand, 13583777 - 13583890
Alignment:
Q  420 ttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaa 511  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||  | ||        |||||| ||||||| ||||||| ||||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  512 aaatatttcatagt 525  Q
    ||| ||||||||||    
T  13583877 aaacatttcatagt 13583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 2900038 - 2900109
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||||||    
T  2900038 tttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaac 2900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 6034275 - 6034204
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattga 6034204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 595
Target Start/End: Original strand, 26318343 - 26318546
Alignment:
Q  400 gaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgt 491  Q
    |||||||||| ||||||  ||||||||||||| |  |||||| |||||||| |||||||||||||||||  |||| || ||||        |||||||||    
T  26318343 gaggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgt 26318442  T
Q  492 taatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaac 591  Q
    |  ||  | || ||| |||||   |||| |||  |||| ||||||||||| ||||||||||  ||||| |||||| |||||||||||| |||||||||||    
T  26318443 tgttaattcaattttctaaaagtcattttataaaatccataatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaac 26318542  T
Q  592 acac 595  Q
    ||||    
T  26318543 acac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 399 - 596
Target Start/End: Complemental strand, 666054 - 665843
Alignment:
Q  399 agaggagggtttatttttcatttttaaattacggactatataacatgtttt------tctaaaataaattaagtgtgattgaggtgtt--------attt 484  Q
    ||||||| ||||||||||| |||||||| ||| ||||||| ||||||||||        ||||| |||||||||||| |||| || ||        ||||    
T  666054 agaggagagtttatttttcttttttaaactacagactatacaacatgttttataaaaaataaaaaaaattaagtgtggttgaagtattatatcatcattt 665955  T
Q  485 atcatgttaatatgtt-aactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 583  Q
    |||||||||||||||| || ||||||||| | |||||||| ||| | ||||||||||||||||| | |||  |||| || |||||||||||||||  | |    
T  665954 atcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccct-c 665856  T
Q  584 atccaaacacacc 596  Q
    |||||||||||||    
T  665855 atccaaacacacc 665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 552
Target Start/End: Original strand, 1395691 - 1395834
Alignment:
Q  418 atttttaaattacggactatataacatg-tttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgttaatatgttaacttttt 508  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||||||  |         | |||||||||| ||||||||||| |||||    
T  1395691 attttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttt 1395790  T
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    |||||| |||  | ||| |  |||||||||||||||||||||||    
T  1395791 aaaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 9721141 - 9721210
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||||| ||||||| ||||||||| ||||||||     |||||||||||||||||||||||||||||    
T  9721141 gtgtgtttggattgaaggtttaggaggggaagggaggggag-----ggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 10818300 - 10818231
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| ||||| |||||| |||| ||||||||||||||||||  || |||||||||||||    
T  10818300 tccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacacc 10818231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 9298709 - 9298636
Alignment:
Q  383 gaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaa 456  Q
    ||||||||| |||||||| |||||||||| |||||| |||||||||||||||  ||| | |||||||| |||||    
T  9298709 gaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 449
Target Start/End: Original strand, 10818232 - 10818316
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttt 449  Q
    ||||||||||||||  |||||| ||||||||| |||||||  |     |||||||||| |||||||||||||||| ||||||||||||||    
T  10818232 gtgtgtttggattgagggtttaggaggggaagggaggggattg-----tttatttttcttttttaaattacggacaatataacatgtttt 10818316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 553
Target Start/End: Original strand, 9298625 - 9298685
Alignment:
Q  494 atatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||  |||||||| | |||||||||||||| ||||||||||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaac 9298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 19278211 - 19278278
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| ||||| |||||  |||| ||||||||||||||||||| || ||||||||||||    
T  19278211 tccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 552
Target Start/End: Complemental strand, 30850153 - 30849960
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||| |||||| |||||||     |||| ||||   |||||||||| | | ||||||| |||||||| ||||| ||    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagag-----tttacttttttattttaaattatgaattatataatatgtttttttaaaacaa 30850059  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||| ||| | ||||| || ||||        ||||||||||| ||| ||||  ||||||||||||||| ||||||| ||||||||||||| |||| ||||    
T  30850058 atttagtataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaa 30849961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 551
Target Start/End: Complemental strand, 2893053 - 2892890
Alignment:
Q  399 agaggagggtttatttttcatttttaaattacggactatataacatgt-ttttctaaaataaatt--aagtgtgattgaggtgtta--------tttatc 487  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| || | |||| | |||||||||   ||||||||||| || |||        ||||||    
T  2893053 agaggagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatc 2892954  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||| ||| |||  || ||| ||||||||||||||| | |||||||||||||  ||||||||    
T  2892953 atgttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaa 2892890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 419 - 474
Target Start/End: Complemental strand, 14548793 - 14548738
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||| |||||||||    
T  14548793 tttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattga 14548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 549
Target Start/End: Complemental strand, 7776046 - 7775996
Alignment:
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 549  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||||    
T  7776046 ttaactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagt 7775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 9719034 - 9719103
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     | |||||||||||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggag-----gatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 14515544 - 14515475
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14515544 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 513
Target Start/End: Original strand, 25741476 - 25741566
Alignment:
Q  431 ggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaa 513  Q
    |||||||||||||||||||| |||||||||||||| |||| ||| || |||        |||||||| ||| |||||||||||||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaactttttaaaaa 25741566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 439
Target Start/End: Complemental strand, 1300829 - 1300787
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatat 439  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  1300829 ggaggggagggtttacttttcatttttaaattacggacaatat 1300787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 10818426 - 10818388
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggac 434  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  10818426 gggaggggagggtttacttttcatttttaaattacggac 10818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 525 - 590
Target Start/End: Original strand, 23091129 - 23091195
Alignment:
Q  525 tatccgtaatttaaaaat-gaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 590  Q
    |||||||||||||||||  ||||||||| |  |||| ||||||||||||||||||  ||||||||||    
T  23091129 tatccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 31799070 - 31799120
Alignment:
Q  504 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||| |||| ||| ||||||||||||||||| |||||||||||    
T  31799070 tttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaaac 31799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 595
Target Start/End: Original strand, 21607020 - 21607085
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||||||||| |||| ||||||||||   || |||||||||||||||  || ||||||||||||    
T  21607020 gtaatttaaaaacgaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 4097686 - 4097754
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| ||||||| |||  | || |||||||||||| |||||  || ||||||||||||    
T  4097686 tccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 21606879 - 21606915
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacgga 433  Q
    |||| |||||||||| |||||||||||||||||||||    
T  21606879 ggaggggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 556 - 596
Target Start/End: Complemental strand, 23091037 - 23090997
Alignment:
Q  556 tcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| |||||||||||||||||| ||| |||||||||||||    
T  23091037 tcccctcccttcccctcctaaaccttcaatccaaacacacc 23090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 23090998 - 23091038
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggag 400  Q
    |||||||||||||| ||||||| ||||||||| ||||||||    
T  23090998 gtgtgtttggattgaaggtttaggaggggaagggaggggag 23091038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 2e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 360 - 601
Target Start/End: Complemental strand, 41110562 - 41110318
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  ||||| ||||||||||     |||||||| |||||| ||||| |||||||||||||||||| |||||||||||||| |||||||    
T  41110562 gtgtgtttggattgagggtttgtgaggggaag-----ggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataa 41110468  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||||||||||||||| || ||||        ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  41110467 attaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaa 41110368  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    || ||| | |||||||||||||||||   |||||||||||||||||||||    
T  41110367 accttctcctcccttcccctcctaaatcctccatccaaacacaccataaa 41110318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 396 - 596
Target Start/End: Original strand, 24560251 - 24560459
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||        |||||    
T  24560251 gggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatc 24560350  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||  |||||||| ||||||||||||||  |||||||    
T  24560351 atgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatcc 24560450  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  24560451 aaacacacc 24560459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 391 - 577
Target Start/End: Complemental strand, 25655187 - 25654991
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt---------- 480  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||              
T  25655187 gagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatatgatc 25655088  T
Q  481 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    ||||||||| |||||||||||||| || |||||| ||||| |||| | |||||| ||||||||||||||||||  |||| |||||||||||||||||    
T  25655087 atttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 359 - 601
Target Start/End: Complemental strand, 18654843 - 18654597
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||| ||||  |||||| ||||||||| ||||||||||   | |||| ||||    |||||||||||||||||||||||||||| |||||||||    
T  18654843 agtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttt----tttaaattacggactatataacatgtttctctaaaata 18654748  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    |||||||||| ||||| || ||||        |||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  ||    
T  18654747 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatcta 18654648  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||  ||||||| ||| |||||||||||  |||||||||||||||| ||||    
T  18654647 aaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 18654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 553
Target Start/End: Complemental strand, 220612 - 220442
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-------- 482  Q
    |||| ||||| ||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||            
T  220612 gagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttataagattgt 220513  T
Q  483 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  220512 ttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaac 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 413 - 578
Target Start/End: Original strand, 52473966 - 52474139
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaact 504  Q
    ||||| ||||||||||||||| ||||||||||||| || ||||||||||||  ||||||||| || ||||        ||||||| ||||||||||||||    
T  52473966 ttttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaact 52474065  T
Q  505 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 578  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||  |||  ||||||||||||||||||    
T  52474066 ttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaac 52474139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 404 - 553
Target Start/End: Complemental strand, 30200293 - 30200133
Alignment:
Q  404 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt-----------gttatttatcatgtt 492  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||           ||| ||||| |||||    
T  30200293 agggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgtt 30200194  T
Q  493 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  30200193 aatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 397 - 553
Target Start/End: Complemental strand, 37102358 - 37102194
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat-------ttatca 488  Q
    |||| ||| |||||| || || |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||       |||| |    
T  37102358 ggaggggaaggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattatatgatcgttatta 37102259  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  37102258 tgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 363 - 553
Target Start/End: Original strand, 21773788 - 21773981
Alignment:
Q  363 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatt 462  Q
    ||||||||||| ||||||| ||||||||| || || ||     ||| || ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaag-----ggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaatt 21773882  T
Q  463 aagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||| |  |||        |||||||||| |||||||||||||||||||||| ||||| |||| | |||||||||||||| ||||||||||    
T  21773883 aagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 403 - 601
Target Start/End: Complemental strand, 41040153 - 41039947
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 494  Q
    ||||||||| |||||  |||||||||||||| || |||||||| |||| ||||||||| |||| |||||||| || ||||        ||||||||||||    
T  41040153 gagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaa 41040054  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||||   | |  || ||||||||||||||| |||||||||||||||    
T  41040053 tatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttccatccaaacaca 41039954  T
Q  595 ccataaa 601  Q
    || ||||    
T  41039953 ccctaaa 41039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 579
Target Start/End: Original strand, 46556178 - 46556369
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttat---------- 486  Q
    |||| |||| ||||| ||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||| || |||| |||              
T  46556178 ggaggggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgt 46556277  T
Q  487 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 579  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||| ||| |||| ||||||||||    
T  46556278 catgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac-ctcccctccattcctctcctaaact 46556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 592
Target Start/End: Complemental strand, 27542141 - 27541937
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    ||||| |||| |||| |||||| ||||||||||| | |||||||||||| ||||||||||||||||||| ||||||||| || ||||        |||||    
T  27542141 gggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatc 27542042  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    ||||||||||||||  ||||||| || ||||||||||| ||  |||||||||||||||| || |||  || | ||||||||||||||||||  || ||||    
T  27542041 atgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatcc 27541942  T
Q  588 aaaca 592  Q
    |||||    
T  27541941 aaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 393 - 547
Target Start/End: Complemental strand, 9312687 - 9312522
Alignment:
Q  393 gaggggagaggagggtttatttttcatttttaaattacggactatataacat---gtttttctaaaataaattaagtgtgattgaggtgttat------- 482  Q
    |||||||| |||||||||  ||||| |||||||||||| |||||||||||||   | ||||||||||||||||||||||||||   || ||||           
T  9312687 gaggggaggggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaattaagtgtgatttgagtattatatgattg 9312588  T
Q  483 -ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
     ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  9312587 tttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaa 9312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 437 - 596
Target Start/End: Complemental strand, 36569072 - 36568906
Alignment:
Q  437 tataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatc 528  Q
    |||| |||||||||||||||||||||||||||||||||  | ||||        |||||||||||||||||||||||||| ||||| |||||||||| |     
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgtt 36568973  T
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    || |||||||||||||||| |||||  |||| ||| |||| |||||||||  ||||||||||||||||    
T  36568972 cgaaatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccctccatccaaacacacc 36568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 596
Target Start/End: Complemental strand, 16275875 - 16275707
Alignment:
Q  436 atataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtat 527  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||        |||||||||||||| |||||||||||| |||| |||||||| | |    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  528 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||| |||||||||||||| ||| |||  |||| |||||| ||||  |||||  ||||||||||||||||    
T  16275775 ccgaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccatccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 396 - 541
Target Start/End: Complemental strand, 2387970 - 2387817
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatc 487  Q
    ||||| |||||||||| ||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| |  | |||        ||||||    
T  2387970 gggaggggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatc 2387871  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 541  Q
    |||||| ||| ||||||| |||||||| ||| |||||| |||||||||||||||    
T  2387870 atgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 595
Target Start/End: Complemental strand, 28581291 - 28581189
Alignment:
Q  493 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||  |||| |||||||| || ||||||  ||||||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  593 cac 595  Q
    |||    
T  28581191 cac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 594
Target Start/End: Original strand, 37807131 - 37807321
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaa-ttaagtgtgattgaggtgttat--------ttatcatgttaatatgttaac 503  Q
    ||||| |||||||| |||| |||||||||||| |||||  |||||||| |||||||||||||| || ||||        ||||||||||||||| |||||    
T  37807131 ttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaac 37807229  T
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaactttccatccaaacaca 594  Q
    ||||||||||| |||||||||| |||  |||||||||| ||||||||||||||  | || ||| ||||||||||||  ||||| ||||||||    
T  37807230 tttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaacattgtcctctcttccccctcctaaaccctccattcaaacaca 37807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 472
Target Start/End: Original strand, 651771 - 651841
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 472  Q
    |||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  651771 ggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgatt 651841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 419 - 594
Target Start/End: Complemental strand, 10748484 - 10748299
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt---------------atttatcatgttaatatgttaac 503  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  | || ||               |||||||||||||||||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||| |||| ||| |  |||||||||||||||     ||||||  ||   ||||||||||||||||||  ||||||||||||||    
T  10748384 tttttaaaaaacattttataatgcccgtaatttaaaaat-----gtaaactctcttctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 46204931 - 46204998
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  46204931 gtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtgattga 46204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 408 - 474
Target Start/End: Original strand, 14898022 - 14898088
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattga 14898088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 474
Target Start/End: Complemental strand, 28582719 - 28582641
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  28582719 gggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttga 28582641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 43005942 - 43005804
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 494  Q
    |||| |||| ||||| |||||||||| |  |||||||||||| ||||||||||||||||| | | ||||||| || ||||        ||||||| ||||    
T  43005942 gaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatattaa 43005843  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatt 535  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  43005842 tatgttaactttttaaaaaatatttcata--atccgtaatt 43005804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 474
Target Start/End: Complemental strand, 6803442 - 6803333
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||||||||| ||||||| |||||||||||||| |||||     |||| ||||| |||||||||||| ||||||  || | |||||| ||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagag-----tttaattttcttttttaaattacagactatgcaataagtttttataaaataa 6803348  T
Q  460 attaagtgtgattga 474  Q
    |||| ||||||||||    
T  6803347 attatgtgtgattga 6803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 407 - 547
Target Start/End: Original strand, 52185060 - 52185207
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 497  Q
    ||||| ||||| ||||||||||||  | |||||||||||||||| |||||||||||||| | | ||||| || ||||        |||||||||||||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatat 52185159  T
Q  498 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    |||||||||||| |||||||||  |||| ||| |||||||||||| ||||    
T  52185160 gttaactttttataaaatattt--tagtgtccataatttaaaaataaaaa 52185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 547
Target Start/End: Original strand, 55327422 - 55327563
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactt 505  Q
    |||| |||||||||||||||||| |||||||| |||||| |||||||| || ||||||||| |  |||        ||||| ||||||||| | ||||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  506 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    ||||||||| |||||||| | ||||| ||||||||| |||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 54574560 - 54574493
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| |||||| ||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  54574560 gtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaagcgtgattga 54574493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 595
Target Start/End: Complemental strand, 40464096 - 40463874
Alignment:
Q  376 ggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgag 475  Q
    |||||||||| |||| |||||||||||     |||| ||||| ||| ||||| | || ||| ||||||| |||||||||||||||||||||| ||||||     
T  40464096 ggtttatgagaggaatagaggggagag-----tttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaa 40464002  T
Q  476 gtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 567  Q
     | |||        |||||||||||| | | ||||  |||||||||| | || ||||| |||||||||||||||||||||||| ||| || ||||  ||     
T  40464001 tttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagtacacactctcatcgttta 40463902  T
Q  568 ccctcctaaactttccatccaaacacac 595  Q
     |||| |||||  | |||||||||||||    
T  40463901 tcctcataaacccttcatccaaacacac 40463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 34641163 - 34641232
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  34641163 tccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 34641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 468
Target Start/End: Complemental strand, 10943852 - 10943752
Alignment:
Q  363 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatt 462  Q
    |||||||||||  |||||||||||| ||||||||||||     |||| | |||| |||||||||||||| || ||  || |||||||| |||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggag-----ggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaatt 10943758  T
Q  463 aagtgt 468  Q
    ||||||    
T  10943757 aagtgt 10943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 595
Target Start/End: Complemental strand, 17474301 - 17474209
Alignment:
Q  504 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||||||||| |||| ||| | ||||||||||||||| ||||||||||| || ||||  ||| |||||||||||  || ||||||||||||    
T  17474301 tttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaacttttccattactttccctcctaaaccctcaatccaaacacac 17474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 24253895 - 24253970
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaa-cattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    ||||||||||||||| |||||||||| | ||||| ||||||||||| ||||||  |||||||||||||||| |||||    
T  24253895 tccgtaatttaaaaaagaaaagtaaatccttccc-tcccttccccttctaaaccctccatccaaacacaccctaaaa 24253970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 26135952 - 26136044
Alignment:
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||| ||||| ||| | ||||||||||||||| |||||||||||  |||  ||||||||||||||||||  ||||| ||| |||||| ||||    
T  26135952 aaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacaccttaaa 26136044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 31684362 - 31684398
Alignment:
Q  438 ataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattga 31684398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 530 - 593
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    |||||||||||| ||||||||||  ||||  ||||||||||||||||||| || ||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 220570 - 220644
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||||||||||||| ||||||||||   |||| ||||||| ||||||||||  |||||||||||| ||| ||||    
T  220570 tccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaa 220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 594
Target Start/End: Original strand, 17474356 - 17474446
Alignment:
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    |||||||||||||||| | | ||| |||||||||||||  |||||| |||  |||| |||||||||||||| |||  || |||||||||||    
T  17474356 tttttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 577
Target Start/End: Original strand, 28582682 - 28582732
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||    
T  28582682 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 28582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 41110494 - 41110563
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||||||  ||||  || |||||||||||||    
T  41110494 tccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacc 41110563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 12790377 - 12790478
Alignment:
Q  361 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 460  Q
    |||||||||||||  |||||| ||| ||||||||| ||||      ||||| ||||| |||||| |||   | |||||||||||||||||||| ||||||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggag------gtttacttttcttttttatattgtaggctatataacatgtttttctataataaa 12790470  T
Q  461 ttaagtgt 468  Q
    ||||||||    
T  12790471 ttaagtgt 12790478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 31894056 - 31894020
Alignment:
Q  438 ataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattga 31894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 474
Target Start/End: Original strand, 37236963 - 37237034
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||| ||| |||||||||||||||||| |||  || || ||||||||  ||||||||||||||||||||||    
T  37236963 ggagggcttacttttcatttttaaattacagacgctacaaaatgtttttg-aaaataaattaagtgtgattga 37237034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 13082943 - 13082856
Alignment:
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||| |||||||||| |||||| ||||||||| |||| ||||| ||||  || ||| | || ||||||  ||||||||||||||||    
T  13082943 aaaaaacatttcatagtgtccgtattttaaaaataaaaattaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 55428552 - 55428619
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||    
T  55428552 tccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 596
Target Start/End: Original strand, 23028086 - 23028168
Alignment:
Q  514 atatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| |||||||||||||||| ||||||||    | || ||  ||||||||| ||||  ||||||||||||||||    
T  23028086 atatttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 595
Target Start/End: Original strand, 6803377 - 6803442
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||||||||| ||||| |||||  || | || ||||||||||||||| ||| ||||||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 592
Target Start/End: Complemental strand, 21773853 - 21773788
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    ||||||||||| ||| |||||||| ||  | || |||||||||||||||||| ||| |||||||||    
T  21773853 tccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 24560288 - 24560219
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  24560288 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 24560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 30200123 - 30200160
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  30200123 ggaggggagggtttagttttcatttttaaattacggac 30200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 37102184 - 37102221
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  37102184 ggaggggagggtttagttttcatttttaaattacggac 37102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 52474125 - 52474088
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacgga 433  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52474125 gggagaggagggtttactttttatttttaaattacgga 52474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Original strand, 30200264 - 30200312
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctccta 575  Q
    ||||||||||||||| |||||||||||  | || |||||||||||||||    
T  30200264 tccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctccta 30200312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 42772047 - 42772087
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggag 400  Q
    |||||||||||||| ||||||| ||||||||| ||||||||    
T  42772047 gtgtgtttggattgaaggtttaagaggggaagggaggggag 42772087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 360 - 596
Target Start/End: Complemental strand, 36347782 - 36347543
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| || |||||||     |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  36347782 gtgtgtttggattgagggtttaggaggggaagggaagggagag-----tttacttttcttttttaaattacggactatataacatgtttttctaaaataa 36347688  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||||||||||||||| || ||||        |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |    
T  36347687 attaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtga 36347588  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  || | ||||||||||||||||||  | ||||||||||||||    
T  36347587 actctctcttcccttcccctcctaaacccttcatccaaacacacc 36347543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 397 - 596
Target Start/End: Original strand, 23748130 - 23748337
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 488  Q
    |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| || ||||        ||||||    
T  23748130 ggaggggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatca 23748229  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 588  Q
    |||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||||| |||  |||| ||||||||||||||||||  ||||||||    
T  23748230 tgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatcca 23748329  T
Q  589 aacacacc 596  Q
    ||||||||    
T  23748330 aacacacc 23748337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 362 - 598
Target Start/End: Complemental strand, 8427110 - 8426879
Alignment:
Q  362 gtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 461  Q
    ||||||||||||  |||||| ||||| ||| ||||||||||     |||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagag-----tttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaat 8427016  T
Q  462 taagtgtgattgaggtgttattt-atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca 560  Q
    |||||| |||||| || |||| | ||||| |||  ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||  ||||     
T  8427015 taagtgcgattgaagtattatatgatcat-ttatcatgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctccct 8426917  T
Q  561 tcccttcccctcctaaactttccatccaaacacaccat 598  Q
    ||||||||||||||||||| ||||| |||| |||||||    
T  8426916 tcccttcccctcctaaactctccattcaaatacaccat 8426879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 396 - 559
Target Start/End: Complemental strand, 15224904 - 15224733
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    ||||| ||| |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||        |||||    
T  15224904 gggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagtgtgattgaagtattatatgatcatttatc 15224805  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 559  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  15224804 atgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacactccc 15224733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 596
Target Start/End: Complemental strand, 36046442 - 36046206
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||||||||||||| ||||||||      ||||| ||||  |||||||||||||||| |||||||||| |||| ||||||||    
T  36046442 gtgtgtttggattgagggtttatgaggggaagggaggggag------gtttacttttgttttttaaattacggacgatataacatgcttttataaaataa 36046349  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||| ||||  ||||| || ||||        ||| |||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||    
T  36046348 attgagtg--attgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataa 36046251  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  |||| ||  ||||||||||||||  ||||||||||||||||    
T  36046250 actctcccctcatttcccctcctaaaccctccatccaaacacacc 36046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 408 - 553
Target Start/End: Complemental strand, 39732926 - 39732774
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 499  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||        |||||||||||||||||    
T  39732926 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 39732828  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||| |||| |||||||| | | |||||||||||||||||||||||||    
T  39732827 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 39732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 397 - 596
Target Start/End: Complemental strand, 19567030 - 19566822
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 488  Q
    |||| |||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||        |||||||    
T  19567030 ggaggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatca 19566931  T
Q  489 tgttaatatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    | |||||||| ||||||||| |||||| |||||||||| || ||||||||||| ||| ||||||||  |||  || ||| |||| ||||||  ||| |||    
T  19566930 ttttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctccattctctttcccttctaaacactccgtcc 19566831  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  19566830 aaacacacc 19566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 397 - 553
Target Start/End: Original strand, 39821704 - 39821868
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatca 488  Q
    |||| |||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||| | || ||        ||||||||    
T  39821704 ggaggggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatca 39821803  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||| |||||| | ||||||||||| ||||||||||||||| ||||| |||||    
T  39821804 tgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaac 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 419 - 555
Target Start/End: Original strand, 16565832 - 16565978
Alignment:
Q  419 tttttaaattacggactatata--acatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaacttttt 508  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || ||||        ||||||| || |||||||||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaacttttt 16565931  T
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacat 555  Q
    ||||||  |||||||||||||||||||||||||| ||||||||||||    
T  16565932 aaaaaacgtttcatagtatccgtaatttaaaaataaaaagtaaacat 16565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 357 - 574
Target Start/End: Complemental strand, 36567096 - 36566874
Alignment:
Q  357 taagtgtgtttggattggaggtttatgaggggaagagaggggagaggagggttta-tttttcatttttaaattacggactatataacatgtttttctaaa 455  Q
    |||||||||||||||||  |||||| |||||||| |||||  ||| ||   |||| |||||| ||||||||||| | | ||||||||||||||||||| |    
T  36567096 taagtgtgtttggattgagggtttaggaggggaatagagg--agatga---tttactttttcgtttttaaattatgaattatataacatgtttttctata 36567002  T
Q  456 ataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaata-tttcatagtatccgtaatttaaaaatgaaa 546  Q
    ||||||||| ||||||||| || ||||        ||||||||||||||||||||||||||| |||| | ||||||| | ||||||||||||||||||||    
T  36567001 ataaattaattgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaa 36566902  T
Q  547 agtaaacattcccatcccttcccctcct 574  Q
    ||||||   || ||||||||||||||||    
T  36566901 agtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 419 - 596
Target Start/End: Original strand, 40022427 - 40022615
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta--atatgttaacttttt 508  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| || ||||        ||| ||| |||  ||||||| |||||||    
T  40022427 tttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 40022526  T
Q  509 aaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||  |||||||||| || ||||||||||||||||| ||||||  |||| ||||||| |||| |||||  ||||||||| ||||||    
T  40022527 aaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 592
Target Start/End: Original strand, 12541796 - 12541999
Alignment:
Q  393 gaggggagaggagggtttatttttcatttttaaattacggactatataacat-gtttttctaaaataaattaagtgtgattgaggtgtta--------tt 483  Q
    |||||||| |||| || || ||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||| ||  ||        ||    
T  12541796 gaggggaggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagtactatatgatcgtt 12541895  T
Q  484 tatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 583  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| |||||||    ||||||||||||  | ||| |||||||  |||||||||  |||    
T  12541896 tatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattt----atgaaaagtaaatctaccc-tcccttcttctcctaaaccctcc 12541990  T
Q  584 atccaaaca 592  Q
    |||||||||    
T  12541991 atccaaaca 12541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 596
Target Start/End: Original strand, 34209592 - 34209706
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |  | || |||| |||| | ||||||  |    
T  34209592 tttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaatctcttccctcccctcccattctaaaccct 34209691  T
Q  582 ccatccaaacacacc 596  Q
     ||||||||||||||    
T  34209692 tcatccaaacacacc 34209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 407 - 541
Target Start/End: Complemental strand, 28262642 - 28262500
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 498  Q
    ||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||  |||||||||  | |||        |||||||||||| |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 541  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 393 - 595
Target Start/End: Complemental strand, 31795982 - 31795772
Alignment:
Q  393 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------ttt 484  Q
    |||||||  |||||| ||| ||||| ||| ||||| ||||| || ||||||||||||| ||||||||||||||||||||||| || |||        |||    
T  31795982 gaggggaagggagggattaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgttt 31795883  T
Q  485 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcca 584  Q
    ||||||||  ||| |||  |||| ||||||  ||||||||| ||||||||||||||| |||||||||    |||| ||||||| |||| |||||  ||||    
T  31795882 atcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctcca 31795783  T
Q  585 tccaaacacac 595  Q
    |||||||||||    
T  31795782 tccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 553
Target Start/End: Original strand, 7681293 - 7681443
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattt-atcatgttaatat---gttaa 502  Q
    |||| |||||||||||| ||||||||| ||||||| |  ||||| ||||||||||||||||||||||| || |||| | ||| | |  ||||   |||||    
T  7681293 gtttgtttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgtatatcatgttaa 7681392  T
Q  503 ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||| ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  7681393 cttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaac 7681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 596
Target Start/End: Original strand, 9631688 - 9631802
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||||||||||||||  | ||||||| || ||||||||||||||| ||||||| |||  ||   |||||| |||||||||||  |    
T  9631688 tttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccct 9631787  T
Q  582 ccatccaaacacacc 596  Q
    |||||||||||||||    
T  9631788 ccatccaaacacacc 9631802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 408 - 559
Target Start/End: Complemental strand, 29525931 - 29525768
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta----------tttatcatgttaatat 497  Q
    |||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||| ||||||||| || |||          ||||||||||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  498 gttaacttt--ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 559  Q
    |||||||||    |||||| | ||||||||||| ||||||||||| |||||||| |||| ||||    
T  29525831 gttaactttccaaaaaaaaaaattcatagtatcagtaatttaaaattgaaaagtgaacactccc 29525768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 27926681 - 27926752
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||| |||||    
T  27926681 tttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 35736178 - 35736283
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| |||||||| ||     ||| ||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  35736178 gtgtgtttggattgagggtttaggaggggaagggaggggagggg-----ttaattttcttttttaaatcacggactagataacatgtttttctaaaataa 35736272  T
Q  460 attaagtgtga 470  Q
    || ||||||||    
T  35736273 atgaagtgtga 35736283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 360 - 547
Target Start/End: Original strand, 9426988 - 9427179
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||||||||| | ||||| ||||||||| |||| |||     |||||  ||||| ||||||||||||  ||||||||||||||||||| ||| |||    
T  9426988 gtgtgtttggattgaaagtttaggaggggaagggaggagag-----ggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaa 9427082  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaacttt-ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    |||| | |||||||| || |||        ||||||||| ||||||| |||||||   |||||| |||| ||||| |||||||||||||||||||||    
T  9427083 attatgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 42316880 - 42316809
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |  | ||||||||||||||||||||||    
T  42316880 tttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaac 42316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 447 - 536
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  447 ttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt 536  Q
    |||||||||||||||||||||||||||  || ||||        |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 549
Target Start/End: Original strand, 1583222 - 1583272
Alignment:
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 549  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 1583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 2241471 - 2241570
Alignment:
Q  423 taaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaa 514  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||| || |||        ||||||||||||||||||||| |||| ||||||    
T  2241471 taaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatcatgttaatatgttaaattttaaaaaaa 2241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 542
Target Start/End: Complemental strand, 37740085 - 37739949
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaac 503  Q
    ||||| |||||||||| | || |||||||||||||||| |||||||||||||||||||||||| || |||        |||||||||||||||| |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaat 542  Q
    ||||| ||||  | |||||||| | |||||||| |||||    
T  37739985 tttttgaaaa--acttcatagtgttcgtaattttaaaat 37739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 468
Target Start/End: Complemental strand, 9592022 - 9591973
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9592022 tttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 36347714 - 36347783
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  36347714 tccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacacc 36347783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 596
Target Start/End: Original strand, 35736337 - 35736429
Alignment:
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||  ||||||||| |||| |||||||||| ||||||| | |  |||| ||||||| ||||||||||  ||||||||||||||||    
T  35736337 tttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacacc 35736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 596
Target Start/End: Original strand, 887261 - 887351
Alignment:
Q  505 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| ||||| |||| |||| |||||||||||||||| ||||||||| |  |||| |||||||||||||||||| || |||||| |||||||    
T  887261 tttttaaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacctt-catccagacacacc 887351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 473
Target Start/End: Original strand, 41841722 - 41841793
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattg 473  Q
    |||||||||  ||||| ||||||||||||  |||||||||||| |||| ||||||||||||||| |||||||    
T  41841722 ggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaagggtgattg 41841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 602
Target Start/End: Original strand, 45257456 - 45257555
Alignment:
Q  504 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    |||| ||||||| |||| ||| ||||||||||||||||| |||||||||||  || | ||||||||| |||||||   |||||||||||||||| |||||    
T  45257456 ttttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaaaa 45257555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 474
Target Start/End: Complemental strand, 6721820 - 6721754
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||| ||||||||  ||||| |||||| |||||||||||||||||||| ||||||||||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattga 6721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 530 - 598
Target Start/End: Complemental strand, 9427053 - 9426985
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccat 598  Q
    |||||||||||| |||||  ||||  || | |||||||||||||||||||||| |||||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacaccat 9426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 596
Target Start/End: Original strand, 15224868 - 15224936
Alignment:
Q  528 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacacc 15224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 596
Target Start/End: Original strand, 17380007 - 17380083
Alignment:
Q  520 catagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||| |||||||||||||||||||||  ||||  |||| || |||||||||||||||  || |||||||||||||    
T  17380007 catagtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacacc 17380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 34187644 - 34187577
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| |||||| ||| ||||| | |||||| |||||||||| || |||||||||||||    
T  34187644 cgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacacc 34187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 41778807 - 41778885
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||| |||||||||| ||||    ||||||||| ||||  ||||| |||||||| |||||||||||||||||||||||    
T  41778807 gggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaattaagtgtgattga 41778885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 604
Target Start/End: Original strand, 39732901 - 39732978
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaaca 604  Q
    ||||||||||||||| ||||||||||   |||| | ||||||||||  |||| ||| ||||||||||||| |||||||    
T  39732901 tccgtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaacacaccctaaaaca 39732978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 27926613 - 27926669
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatta 463  Q
    ||||||||||| |||||||||   ||| | |||||||||||||||||||||||||||    
T  27926613 gtttatttttcttttttaaatactggattgtataacatgtttttctaaaataaatta 27926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 593
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  534 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||  || ||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 22356177 - 22356252
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    ||||||||||||||| ||||| | |||  |||| |||||||||||||||||   || ||||||||||||| |||||    
T  22356177 tccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaaa 22356252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 31061428 - 31061361
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||  |||||| | |  |||||||| |||||||||||||| ||| |||||||||||||    
T  31061428 cgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacacc 31061361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 35736246 - 35736172
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||| ||||||||| ||||| ||| |  |||| ||||||||||||||||||  || ||||||||||||| ||||    
T  35736246 tccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaa 35736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 36046207 - 36046276
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||| |  |||||| ||||||||  ||||||||||     |||||||||||||||||||||||||||    
T  36046207 gtgtgtttggatggagggtttaggaggggaaatgaggggagag-----tttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 541
Target Start/End: Complemental strand, 39354378 - 39354231
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 493  Q
    |||| ||||| ||||  ||||||||||||    |||||||||||||| ||||||||||| | ||||||||||| || |||         |||| ||||||    
T  39354378 ggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgtta 39354279  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 541  Q
     ||| |||| ||||| |||||||||||||| | | |||||||||||||    
T  39354278 ttattttaatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 474
Target Start/End: Original strand, 886958 - 887028
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||| ||| ||||| ||||||||||||  || |||||| ||| |||| |||||||||||| ||||||||||    
T  886958 ggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtgattga 887028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 468
Target Start/End: Complemental strand, 2381174 - 2381125
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    ||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  2381174 tttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgt 2381125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 596
Target Start/End: Complemental strand, 16713587 - 16713494
Alignment:
Q  503 ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||| ||||||||||| ||| | | |||||||||||||| |||| | |||  |||| |||||||||||| |||||  || ||| |||||||||    
T  16713587 cttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 32503232 - 32503269
Alignment:
Q  435 tatataacatgtttttctaaaataaattaagtgtgatt 472  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  32503232 tatataacatatttttctaaaataaattaagtatgatt 32503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 36046375 - 36046443
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||||  |||||||||| | ||| |||||||||||| |||||  || |||||||||||||    
T  36046375 tccgtaatttaaaaaacaaaagtaaacctcccc-tcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 530 - 602
Target Start/End: Complemental strand, 41841750 - 41841678
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    |||||||||||| |||||  ||||  ||||||||||| ||||||||||   || ||||||||||||| |||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacaccttaaaa 41841678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 7e-57; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 360 - 596
Target Start/End: Original strand, 54935070 - 54935311
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  54935070 gtgtgtttggattgagggtttaggaggggaagggagggg----gagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataa 54935165  T
Q  460 attaagtgtgattgaggtgtta---------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||||||||||||||| || ||          |||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||| ||    
T  54935166 attaagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaata 54935265  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||  |||| ||||||||||||||||||  ||||||||||||||||    
T  54935266 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 54935311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 11960615 - 11960817
Alignment:
Q  16 atgatggatttttcttcgatttcttgtaaggaatctcatactcagtg-caattttagaggtgccatggaaggaagcttgaaagtttggtaac---ggtga 111  Q
    ||||||||||||||||||||||||||||||||| || | | | |||| ||| |||||||||||||||||||||| |||||||||||||||||   |||||    
T  11960615 atgatggatttttcttcgatttcttgtaaggaacctgagaatgagtgtcaaatttagaggtgccatggaaggaaccttgaaagtttggtaacgatggtga 11960714  T
Q  112 ctaacaaagtaaacacgaggggaggtaaatgnnnnnnncaaactaaagggggtgtgagtgtcattaagtaaaacctcaaggaaggtaaatgcaattttct 211  Q
    |||||| |||||||| | |||||||||||||        |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  11960715 ctaacagagtaaacatgcggggaggtaaatgtttttttaaaactagagggggtgtgagtgtcattaagtaaaacctcaagggaggtaaatgtaattttct 11960814  T
Q  212 ctt 214  Q
    |||    
T  11960815 ctt 11960817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 403 - 596
Target Start/End: Original strand, 27735786 - 27735987
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaa 494  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||        ||||||||||||||    
T  27735786 gagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaa 27735885  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    |||| ||||| ||||||||| |||| ||||| ||||||||||||||||||||| | |||  |  | ||||||||||||||||||  ||||||||||||||    
T  27735886 tatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacaca 27735985  T
Q  595 cc 596  Q
    ||    
T  27735986 cc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 419 - 596
Target Start/End: Original strand, 45741947 - 45742132
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 510  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||        ||||||||||||||||||||||||||||    
T  45741947 tttttaaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaa 45742046  T
Q  511 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| |||||||||| |||||||||||||||||||||||||||  |||| |||||| ||| |||||||  | ||||||||||||||    
T  45742047 aaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacacc 45742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 31348562 - 31348340
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||   ||||| ||||||||     ||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31348562 gtgtgtttggattgagagtttaggaggggaa-----gggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataa 31348468  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||| ||||||||||  | |||        |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  31348467 attatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 31348368  T
Q  552 acattcccatcccttcccctcctaaact 579  Q
    ||  | || |||||||||||| ||||||    
T  31348367 acccttccctcccttcccctcataaact 31348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 359 - 601
Target Start/End: Complemental strand, 5731073 - 5730827
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||| ||||  |||||| ||||||||| ||||||||||   | |||| ||||    |||||||||||||||||||||||||||| |||||||||    
T  5731073 agtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttt----tttaaattacggactatataacatgtttctctaaaata 5730978  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    |||||||||| ||||| || ||||        |||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  ||    
T  5730977 aattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatcta 5730878  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||  ||||||| ||| |||||||||||  |||||||||||||||| ||||    
T  5730877 aaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 5730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 360 - 602
Target Start/End: Original strand, 37711141 - 37711371
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37711141 gtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataa 37711240  T
Q  460 attaagtgtgattgaggtgttat-ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcc 558  Q
    ||||||||||||||| || |||| | ||||| |||  |||||            ||||||| ||||| ||||||||||||||||||||  |||||  |||    
T  37711241 attaagtgtgattgaagtattatatgatcat-ttatcatgtt------------aatattttatagtgtccgtaatttaaaaatgaaatctaaaccctcc 37711327  T
Q  559 catcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    | ||||||||||||||||||  |||||||||||||||| |||||    
T  37711328 cctcccttcccctcctaaaccctccatccaaacacaccctaaaa 37711371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 402 - 596
Target Start/End: Original strand, 54320474 - 54320676
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 493  Q
    |||||||||  ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  || ||||        |||||||||||    
T  54320474 ggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgtta 54320573  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    ||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||  |||| ||||||||||||||||||  || ||||||||||    
T  54320574 atatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacac 54320673  T
Q  594 acc 596  Q
    |||    
T  54320674 acc 54320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 406 - 596
Target Start/End: Complemental strand, 49735668 - 49735470
Alignment:
Q  406 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 497  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||        ||||||||||||||     
T  49735668 ggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaatag 49735569  T
Q  498 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| | |||||||  | ||||||||||||||||||||||| |||  |||| ||||||||||||||||||  || |||||||||||||    
T  49735568 gttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 596
Target Start/End: Original strand, 41174397 - 41174587
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt 505  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||| || ||||        |||| ||||||||||| ||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactt 41174496  T
Q  506 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||  |||||||||| ||| ||| ||||||||||||| |||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  41174497 tttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacacc 41174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 414 - 590
Target Start/End: Original strand, 35248738 - 35248922
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgttaatatgttaactt 505  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  506 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 590  Q
    || ||||||||||    ||| ||| |||||||||| ||||||||||||  |||| ||||| || |||||||||  ||||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 360 - 535
Target Start/End: Original strand, 26166940 - 26167118
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||  ||||||||||     ||| |||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  26166940 gtgtgtttggattgagggtttaggaggggaatggaggggagag-----tttgtttttcttttttaaattacagactatataacatgtttctctaaaataa 26167034  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatt 535  Q
    ||||||||||||||| || |||        ||||||||||||||||||||||| || |||||| |||||| ||| |||||||||    
T  26167035 attaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 572
Target Start/End: Complemental strand, 1968600 - 1968377
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||| ||||     |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  1968600 gtgtgtttggattgagggtttaggaggggaagggagggaagag-----tttaattttcatttttaaattacggactatataatatgtttttctaaaataa 1968506  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaacttt-------ttaaaaa-atatttcatagtatccgtaatttaaaaatg 543  Q
    || | |||||||||| || |||        |||||||||||||||||||||||||       ||||||| |||||||||||| ||| |||||||| | ||    
T  1968505 atcaggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaagttaaaaagatatttcatagtgtccataatttaatattg 1968406  T
Q  544 aaaagtaaacattcccatcccttcccctc 572  Q
    ||||||||||  |||| |||||| |||||    
T  1968405 aaaagtaaaccctcccctccctttccctc 1968377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 553
Target Start/End: Complemental strand, 46007943 - 46007744
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||||| | ||||||||||| ||||||| |||||||    
T  46007943 agtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaata 46007849  T
Q  459 aattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaaaaa--tatttcatagtatccgtaatttaaaaatgaaaag 548  Q
    ||||||||| |||||| || ||        ||||||||||||||||||||||||||||||||||    ||||||  | || |||||||||||||||||||    
T  46007848 aattaagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaag 46007749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 24565536 - 24565348
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt 505  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||  | || |||||||| || ||||        |||||| ||||||| ||||||||    
T  24565536 tttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagtattatatgtttgtttatcacgttaataagttaactt 24565439  T
Q  506 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||||  ||||    |||||| |||||||| |||||||||||||||||    
T  24565438 tttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacacc 24565348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 407 - 584
Target Start/End: Original strand, 6891405 - 6891590
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 498  Q
    ||||||||||| |||||||| |||  | |||||||||||||||||||||||||||||||||||||||| || |||        ||||| |||||| |||     
T  6891405 gtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattatt 6891504  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcca 584  Q
    |||| ||||| ||||| | |||||||| ||| ||||||||||| |||||  ||||  |||| || |||||||||||||||| ||||    
T  6891505 ttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaactatcca 6891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 423 - 552
Target Start/End: Original strand, 36151637 - 36151773
Alignment:
Q  423 taaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaa 514  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||        |||||||||||||||||||||| |||||||||     
T  36151637 taaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaac-ttttaaaaat 36151735  T
Q  515 tatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
     ||||  |||| | | ||||||||||||||||||||||    
T  36151736 cattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 553
Target Start/End: Complemental strand, 47433919 - 47433754
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactata-taacatgtttttctaaaataaattaagtgtgattgaggtgttat-ttatc------ 487  Q
    |||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| || |||| | |||          
T  47433919 gggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttat 47433820  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||| ||| |||| ||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||    
T  47433819 atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaac 47433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 596
Target Start/End: Original strand, 6938394 - 6938489
Alignment:
Q  501 aactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| |||  |||| ||| |||||||| ||||| |||||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacacc 6938489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 433 - 541
Target Start/End: Original strand, 16400871 - 16400987
Alignment:
Q  433 actatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatag 524  Q
    |||||| ||||||||||||||||||||||||| | ||||||| || ||||        ||||||||||||||||||||||||||||||| ||||||||||    
T  16400871 actatacaacatgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatag 16400970  T
Q  525 tatccgtaatttaaaaa 541  Q
    | ||| |||||||||||    
T  16400971 tgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 590
Target Start/End: Complemental strand, 17938318 - 17938115
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttcta-aaataaattaagtgtgattgaggtgttat--------ttat 486  Q
    |||||| ||| ||||| ||||| ||||||||||||  |||||||||||| ||||| |  ||||||||||||||||||||| || ||||        ||||    
T  17938318 gggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttat 17938219  T
Q  487 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 586  Q
    ||||||| ||| |||| ||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||  | || ||| ||||||||||||||  ||||||    
T  17938218 catgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccctccatc 17938119  T
Q  587 caaa 590  Q
    ||||    
T  17938118 caaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 360 - 547
Target Start/End: Original strand, 29798291 - 29798478
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||||||| ||| ||     |||| ||||  |||||||||||| |||||||||||||||||||||    |||    
T  29798291 gtgtgtttggattgatggtttaggaggggaagagagaggatag-----tttacttttattttttaaattacagactatataacatgtttttct----taa 29798381  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgtt-aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    || |||||||||||| || ||||        |||| ||||| || ||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  29798382 atcaagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 29798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 34110933 - 34111003
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  34110933 tttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagtaaac 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 408 - 553
Target Start/End: Original strand, 44784038 - 44784190
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 499  Q
    |||| ||||| ||||||||||||  || |||||||| ||||||||||| |||||||||||||||||| || |||        ||||| | ||||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||  |||| |||||||||| |||| | ||||||||||||| |||||||||||    
T  44784138 taac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaac 44784190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 21695129 - 21694910
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||| ||||||||||||||||     | || |||||||||| |||||  |||||||||| |||| ||||||  | ||||| | || |||    
T  21695129 gtgtgtttggattgggggtttatgaggggaag-----gaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaa-taa 21695036  T
Q  460 attaagtgtgattgaggtgttat-------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    ||||||||||||||| || ||||       ||||||| ||  ||| | || || |||||||  |||| ||||| ||||||||||||||| |||||||||     
T  21695035 attaagtgtgattgaagtattatatgatcattatcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaag 21694936  T
Q  553 cattcccatcccttcccctcctaaac 578  Q
    |  |||| ||||||||||||||||||    
T  21694935 ccctcccgtcccttcccctcctaaac 21694910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 432 - 577
Target Start/End: Original strand, 22659268 - 22659413
Alignment:
Q  432 gactatataacatgtttttctaaaataaattaagtgtgattgaggtg-ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccg 530  Q
    |||||||||||||||||| |||||| ||||||||||  ||| |  || || ||||| |||||||||| |||| |||| ||||||||||| || || || |    
T  22659268 gactatataacatgttttcctaaaagaaattaagtg--attaatatgattgtttattatgttaatatattaatttttaaaaaaatattttatggtgtctg 22659365  T
Q  531 taattt-aaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    |||||| |||||||||||||||||| || | ||||||  |||||||||    
T  22659366 taatttaaaaaatgaaaagtaaacactctcctcccttttcctcctaaa 22659413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 547
Target Start/End: Complemental strand, 2248042 - 2247854
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| |||| |||| || |||||||     |||| ||||| |||||||||||| || |||||||||||||||||||||| ||    
T  2248042 gtgtgtttggattgagggtttaggaggagaagtgaagggagag-----tttacttttcttttttaaattacaga-tatataacatgtttttctaaaa-aa 2247950  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    | || |||||||||| || |||        |||||||| |||||| |||||  |||||| ||| |||| ||| | |||||||||||||||||||||    
T  2247949 aatatgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 31348494 - 31348563
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||| || |||||||||||||    
T  31348494 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 578
Target Start/End: Complemental strand, 45132695 - 45132517
Alignment:
Q  406 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 497  Q
    |||||| ||||| ||||||||||||||||||||||| ||||      |||||||||||||||||||||| || ||||        ||||||| |||||||    
T  45132695 ggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaagtgtgattgaagtattatatgatcgtttatcattttaatat 45132602  T
Q  498 gttaactttttaaaaaatatttcatagtatccgtaatttaaaa-----atgaaaagtaaacattcccatcccttcccctcctaaac 578  Q
    |||||||||||| |||| ||||| |||| | | ||||||||||     |||||||||||||  |||| || ||||| |||||||||    
T  45132601 gttaacttttta-aaaacatttcgtagtgtacataatttaaaaagattatgaaaagtaaaccatcccctctcttccgctcctaaac 45132517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 408 - 553
Target Start/End: Original strand, 28332850 - 28333003
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 499  Q
    |||| ||||| ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||||||| || |||        |||| || |||||||||     
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatgc 28332949  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||  ||||| |||||||||| |||| |  ||||||||||||  ||||||||||    
T  28332950 taatgttttagaaaatatttcgtagtgttggtaatttaaaaacaaaaagtaaac 28333003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 468
Target Start/End: Original strand, 56135752 - 56135855
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| ||||||  ||||||||||||| || || ||| |||||||| ||||||||    
T  56135752 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataa 56135846  T
Q  460 attaagtgt 468  Q
    |||||||||    
T  56135847 attaagtgt 56135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 474
Target Start/End: Complemental strand, 2917150 - 2917095
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | |||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattga 2917095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 553
Target Start/End: Original strand, 36278376 - 36278450
Alignment:
Q  479 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||| |||| || |||||||||||| ||||| |||||    
T  36278376 ttatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaactaaac 36278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 1968532 - 1968601
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||||||||| |||||  | || ||||||||||||||||||  || |||||||||||||    
T  1968532 tccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacacc 1968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 27735816 - 27735749
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||||||||||||| |||||  || | ||||||||||||||||||  || |||||||||||    
T  27735816 tccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  532 aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||||||| |||||||||||  |||| ||||||||||||||||||  || ||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 603
Target Start/End: Original strand, 2247972 - 2248050
Alignment:
Q  525 tatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaac 603  Q
    |||| |||||||||||| |||||||||||  |||| || |||| ||||||||||  || ||||||||||||||| ||||    
T  2247972 tatctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacaccattaaac 2248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 54935310 - 54935241
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||||||||||||||||||||||||||    
T  54935310 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 593
Target Start/End: Original strand, 55510202 - 55510407
Alignment:
Q  394 aggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------attta 485  Q
    ||||||| |||||  ||| ||||||||||||| |||  ||| || ||| |||||||| ||||||||||||||||||| ||| || ||        ||| |    
T  55510202 aggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattca 55510301  T
Q  486 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccat 585  Q
    |||||||  ||| || | |||||  ||||||||| ||||| | |||||||||||||| ||||||||||  || |||  ||| ||||| |||||| |||||    
T  55510302 tcatgttgttat-ttcaatttttttaaaatattttatagtgttcgtaatttaaaaat-aaaagtaaaccctcacatttctttccctcttaaactctccat 55510399  T
Q  586 ccaaacac 593  Q
    ||||||||    
T  55510400 ccaaacac 55510407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 45132668 - 45132737
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  || | || |||||||||||||||| || || ||||||||||    
T  45132668 tccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacacc 45132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 551
Target Start/End: Complemental strand, 45911368 - 45911327
Alignment:
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  45911368 aaaaatattttatagtatccgtaatttaaaaaagaaaagtaa 45911327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 54576398 - 54576329
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||| |||||| ||||||||| |  |||| ||||||||||| ||||||  ||||||||||||||||    
T  54576398 tccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 54935137 - 54935069
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||  || |||||||||||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacc 54935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 31720028 - 31719966
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgt--ttttctaaaataaattaagtgtgattg 473  Q
    ||||| ||||||||||||  ||||||||||||||  |||| | ||||||||||||||||||||    
T  31720028 ttttcttttttaaattacaaactatataacatgttttttttttaaataaattaagtgtgattg 31719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 2247843 - 2247889
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgttt 448  Q
    |||||||| ||||||||||||||||||||||||  ||||| ||||||    
T  2247843 ggagggttcatttttcatttttaaattacggacattataaaatgttt 2247889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 6938322 - 6938360
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataa 441  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  6938322 gaggatttatttttcctttttaaattacggactatataa 6938360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 27735947 - 27735901
Alignment:
Q  404 agggtttatttttcatttttaaattacggactatataacatgttttt 450  Q
    |||||| ||||||||||||||||||||||||  ||||| ||||||||    
T  27735947 agggttcatttttcatttttaaattacggacactataaaatgttttt 27735901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 596
Target Start/End: Original strand, 47433885 - 47433951
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| |||||||||||  |||  ||||||||||||||||||  || | |||||||||||    
T  47433885 gtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacacc 47433951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 47846233 - 47846303
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||||||||||  ||||||||||  |||||||||||| |||| |||||  || ||||||||||||| ||||    
T  47846233 taatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacaccttaaa 47846303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 49735471 - 49735540
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| | ||||||||||||||||||||||    
T  49735471 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 474
Target Start/End: Original strand, 22921033 - 22921094
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaat-taagtgtgattga 474  Q
    |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||||||||||||    
T  22921033 tttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattga 22921094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 474
Target Start/End: Complemental strand, 22970766 - 22970705
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaat-taagtgtgattga 474  Q
    |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||||||||||||    
T  22970766 tttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattga 22970705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 468
Target Start/End: Original strand, 34995108 - 34995157
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    ||||||||||||| || || | | ||||||||||||||||||||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgt 34995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 508 - 596
Target Start/End: Complemental strand, 37761555 - 37761467
Alignment:
Q  508 taaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| ||  | | |||||||||||||| |||||| |||  | || ||| ||| ||||||||||| || |||||||||||||    
T  37761555 taaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacacacc 37761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 7e-57; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 397 - 594
Target Start/End: Original strand, 8529834 - 8530039
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 488  Q
    |||| |||||||||| ||||| ||||||||||||  |||||||||||||||||| | ||||||||||||||||||||| || ||||        ||| ||    
T  8529834 ggaggggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttacca 8529933  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 588  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||| | ||||||    
T  8529934 tgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatcca 8530033  T
Q  589 aacaca 594  Q
    ||||||    
T  8530034 aacaca 8530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 404 - 596
Target Start/End: Complemental strand, 40095136 - 40094935
Alignment:
Q  404 agggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 494  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||        ||||||||||||    
T  40095136 agggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaa 40095037  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    | ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||  |||| | ||||||||||||||||  ||||||||||||||    
T  40095036 tttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacaca 40094937  T
Q  595 cc 596  Q
    ||    
T  40094936 cc 40094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 360 - 596
Target Start/End: Original strand, 30010335 - 30010574
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     | |||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  30010335 gtgtgtttggattgagggtttaggaggggaagggaggggag-----gatttacttttcttgtttaaattacggactatataacatgtttttctaaaataa 30010429  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||| |||| || ||||        |||| ||||||||||||||||| ||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  30010430 attaagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaa 30010529  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  |||| ||||||||||| ||||||  ||||||||||||||||    
T  30010530 accctcccctcccttccccttctaaaccctccatccaaacacacc 30010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 360 - 601
Target Start/End: Original strand, 12234013 - 12234257
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||| ||     || ||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12234013 gtgtgtttggattgagggtttaggaggggaagggagggtag-----ggcttaattttcttttttaaattacggactatataacatgtttttctaaaataa 12234107  T
Q  460 attaagtgtgattgaggtgttattt--------atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    || |||||||||||| || | || |        || ||||||||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||| |||    
T  12234108 atcaagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaa 12234207  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||  |||| ||||||||||||||||||  |||||||||||||||||||||    
T  12234208 accctcccctcccttcccctcctaaaccctccatccaaacacaccataaa 12234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 359 - 601
Target Start/End: Complemental strand, 38510136 - 38509891
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    ||||||||||||||   |||||| ||||||||| ||||||||     |||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  38510136 agtgtgtttggattaagggtttaggaggggaagggaggggag-----ggtttagttttcttttttaaactacggactatataacatgtttttctaaaata 38510042  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||| |||||||||||| || ||||        ||||| |||||| ||||||| ||||||||| | |||||||||| |||||||||||||||||||||||     
T  38510041 aatcaagtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtg 38509942  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||  |||  ||||||||||||||||||  || ||||||||||||| ||||    
T  38509941 aaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaaa 38509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 360 - 601
Target Start/End: Original strand, 41498407 - 41498652
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| ||||||||||| | ||||| ||||||| |||||||  ||||    
T  41498407 gtgtgtttggattgagggtttaggaggggaagtgaggggag-----ggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataa 41498501  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
     |||||||||||||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  41498502 gttaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 41498601  T
Q  552 acattcccatccctt-cccctcctaaactttccatccaaacacaccataaa 601  Q
    |   |||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  41498602 atcctcccctcccttacccctcctaaactctccatccaaacacaccctaaa 41498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 364 - 596
Target Start/End: Complemental strand, 2859169 - 2858934
Alignment:
Q  364 gtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaatta 463  Q
    |||||||||| ||||||| ||||||||| ||||||||     |||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggag-----ggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaatta 2859075  T
Q  464 agtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacat 555  Q
    ||||||||||| || |||        ||||| |||| | ||||||||||||||||| || |||||||||  || |||||||| |||||||||||||||      
T  2859074 agtgtgattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccc 2858975  T
Q  556 tcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| |||||| |||||||||||  ||||||||||||||||    
T  2858974 tcccctccctttccctcctaaaccctccatccaaacacacc 2858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 360 - 550
Target Start/End: Complemental strand, 32951559 - 32951366
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||   ||||| ||| ||||| |||||||||     ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  32951559 gtgtgtttggattgagagtttaggagaggaagggaggggaga-----gtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataa 32951465  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||||||||||||||| || |||        |||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||    
T  32951464 attaagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 360 - 596
Target Start/End: Complemental strand, 35349703 - 35349468
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||||||||   |||||||||||||||| ||||||||     |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  35349703 gtgtgtttggattaagggtttatgaggggaagggaggggag-----ggtttacttttcgtttttaaattacggactatataacatttttttctaaaataa 35349609  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    | |||| || ||||| || ||||        ||||||||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||||||||    
T  35349608 actaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaa 35349511  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  ||||  ||| ||||||| |||||  ||||||||||||||||    
T  35349510 accctccc--cccctcccctcttaaaccctccatccaaacacacc 35349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 546
Target Start/End: Complemental strand, 50744490 - 50744332
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 488  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||        |||||||    
T  50744490 ggaggggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatca 50744391  T
Q  489 tgttaatatgttaact-ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||    
T  50744390 tgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 552
Target Start/End: Original strand, 51597672 - 51597866
Alignment:
Q  361 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 460  Q
    |||||||||||||  |||||||||  ||||| ||||||||||     |||| ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagag-----tttacttttcttttttaaatcacggactatataacatgtttttttaaaataaa 51597766  T
Q  461 ttaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    |||||||||||||| || |||        |||||||| |||||||||||||||||||||||  |||||||||| | | |||||||||| |||||||||||    
T  51597767 ttaagtgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 553
Target Start/End: Original strand, 10391912 - 10392072
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 493  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | || |||        ||||||||||||    
T  10391912 ggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcatgtta 10392011  T
Q  494 atatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||| |||||| |||| ||| | |  |||||||||||| |||||||||||    
T  10392012 atatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaac 10392072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 403 - 553
Target Start/End: Complemental strand, 49946791 - 49946633
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 494  Q
    ||||||||| ||||| | ||||||  |  ||||||||||||||||||| ||||||||||||| ||||||||| || ||||        ||||||||||||    
T  49946791 gagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaa 49946692  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||    
T  49946691 tatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaac 49946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 553
Target Start/End: Original strand, 6563614 - 6563775
Alignment:
Q  398 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta-------tttatcatg 490  Q
    |||||||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||||||| |||| |||||  | |||       |||||||||    
T  6563614 gagaggagggtttatttt-cttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatctttatcatg 6563712  T
Q  491 ttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  6563713 ttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 6563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 45585884 - 45585739
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatg 498  Q
    ||||| ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||| || ||  ||        |||||||||||||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatga 544  Q
    ||||||||| |||||| |||| ||||||||  ||||||||||||||    
T  45585784 ttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 601
Target Start/End: Complemental strand, 43552108 - 43551993
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||||||||||||||||| ||||||||     ||||||||||||||||||| |||||  || ||||| ||| || ||||||| ||    
T  43552108 tttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaacctt 43552013  T
Q  582 ccatccaaacacaccataaa 601  Q
    ||||||||||||||| ||||    
T  43552012 ccatccaaacacaccctaaa 43551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 26324017 - 26324112
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaa 455  Q
    ||||||||||||||  |||||| ||||||||| |||||||| |||||||||  ||||| ||||||||||||  |||||||||||||||||||||||    
T  26324017 gtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 595
Target Start/End: Complemental strand, 20576247 - 20576136
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    |||||||||||||||| |||||| ||||||||| ||||||  || ||||||||||||||||||||  |||||  |||| ||||||||||||||||||  |    
T  20576247 tttatcatgttaatatattaactctttaaaaaacatttca--gtgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccct 20576150  T
Q  582 ccatccaaacacac 595  Q
    | ||||||||||||    
T  20576149 ctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 7444623 - 7444736
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||| ||||||||||||||||||||||||||  |||| ||||| |||||||||| |||||||||| |||||  |||| || |||||| | ||||||| |    
T  7444623 tttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactct 7444722  T
Q  582 ccatccaaacacac 595  Q
     |||||||||||||    
T  7444723 tcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 413 - 567
Target Start/End: Complemental strand, 26941036 - 26940874
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaact 504  Q
    ||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| || |||        ||||  ||||||||| |||||||    
T  26941036 ttttcttttttaaaatacggattctataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaact 26940937  T
Q  505 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 567  Q
    ||| || |||||||||||||| ||  |||||||||||| |||||| |||  ||||||| ||||    
T  26940936 tttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccctcccatctcttc 26940874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 439 - 553
Target Start/End: Complemental strand, 36285741 - 36285619
Alignment:
Q  439 taacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccg 530  Q
    |||||||||||| ||||||| || |||||||||||| || ||||        ||||||||||||||||||||||||||||||||||||| ||||| | ||    
T  36285741 taacatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcg 36285642  T
Q  531 taatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||| || |||||    
T  36285641 taatttaaaaatgataaataaac 36285619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 602
Target Start/End: Original strand, 28770852 - 28770969
Alignment:
Q  483 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 582  Q
    |||||||||||||||||||| |||||| |||| |||||||| | |  ||||||||||||| |||| |||||  |||  ||| || ||||||||||| |||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  583 catccaaacacaccataaaa 602  Q
    |||||||||||||| |||||    
T  28770950 catccaaacacaccctaaaa 28770969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 32951491 - 32951566
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    ||||||||||||||| |||||||||||  |||| |||||||| |||||||||| || ||||||||||||| |||||    
T  32951491 tccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaaaa 32951566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 40964726 - 40964798
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||| |||||||||||||||||| |||| ||||||| |  || |||||||||||||||||||||||||||    
T  40964726 tttatcacgttaatatgttaacttttaaaaaaaatatttgacggtgtccgtaatttaaaaatgaaaagtaaac 40964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 414 - 474
Target Start/End: Complemental strand, 44211097 - 44211037
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  44211097 tttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattga 44211037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 2470944 - 2470867
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||| |||||| ||||| |||||||||||   |||||||||||||||||||||||||| | ||| |||||||||    
T  2470944 ggaggggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattga 2470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 553
Target Start/End: Original strand, 41676363 - 41676480
Alignment:
Q  446 tttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactt--tttaaaaaatatttcatagtatccgtaatt 535  Q
    ||||||||||||||||||||||||||||  || ||||        |||||||||||||||||||| ||     |||||| |||| ||||| |||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  536 taaaaatgaaaagtaaac 553  Q
    ||||||||||||||||||    
T  41676463 taaaaatgaaaagtaaac 41676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 468
Target Start/End: Complemental strand, 43553129 - 43553068
Alignment:
Q  408 tttatttttcatttttaaatt-acggactatataacatgtttttctaaaataaattaagtgt 468  Q
    |||| |||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||    
T  43553129 tttacttttcatttttaaatttacggattatataacttgtttctctaaaataaattaagtgt 43553068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 591
Target Start/End: Original strand, 2859105 - 2859169
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaac 591  Q
    |||||||||||||||  ||||||||||  |||| |||||||||||||||||| ||| ||||||||    
T  2859105 tccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 601
Target Start/End: Complemental strand, 23536844 - 23536777
Alignment:
Q  534 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||||||  ||||| |||||| |||||||||||| |||||||||   |||||||||||||||||||||    
T  23536844 tttaaaatagaaaattaaacactcccatcccttctcctcctaaatcctccatccaaacacaccataaa 23536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 35349635 - 35349709
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||| |||||  |  ||||||||||||| ||||    
T  35349635 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaa 35349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 30010403 - 30010334
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||||    
T  30010403 tccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacacc 30010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 596
Target Start/End: Complemental strand, 41498471 - 41498406
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacc 41498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 2470819 - 2470727
Alignment:
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||||| |||| ||||| | ||||||||||||||| |||  ||||  |||  || |||||||||||||||  |||||||||||||||| ||||    
T  2470819 aaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaaa 2470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 596
Target Start/End: Original strand, 2506689 - 2506781
Alignment:
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||| ||||| ||| |||| |||||||||||| ||||| |||    || | |||||||| || ||||||| ||||||||||||||||    
T  2506689 tttttaaaaattattttataatatctgtaatttaaaaaagaaaactaagtcatctcctcccttcctcttctaaactctccatccaaacacacc 2506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 41676485 - 41676437
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgttttt 450  Q
    |||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  41676485 ggagggtttacttttcatttttaaattacggacactataaaatgttttt 41676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 594
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    |||||||||||  |||||||| |  |||| ||||||||||||||||||  ||||||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 577
Target Start/End: Complemental strand, 10391943 - 10391893
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    |||||||||||||||||||||||||||  |||| ||  |||||||||||||    
T  10391943 tccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaa 10391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 12234081 - 12233999
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaaccat 609  Q
    ||||||||||||||| ||||| ||| |  | || ||||||||||||||||||  || ||||||||||||| | ||| ||||||    
T  12234081 tccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaaaaaaccat 12233999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 12234251 - 12234182
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||| ||||||||||||||||||||||    
T  12234251 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 38509928 - 38509966
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  38509928 gggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 468
Target Start/End: Complemental strand, 1085677 - 1085628
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    ||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  1085677 tttttaaattacgaaccatgtaaaatgtttttttaaaataaattaagtgt 1085628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 596
Target Start/End: Original strand, 20607410 - 20607459
Alignment:
Q  547 agtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  20607410 agtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 20607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 600
Target Start/End: Original strand, 25268437 - 25268510
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataa 600  Q
    ||||||||||||||| | |||||||||  |||| || |||||||| ||||||  |||||||||| | |||||||    
T  25268437 tccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaatataccataa 25268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 596
Target Start/End: Complemental strand, 40709391 - 40709294
Alignment:
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| ||| |||||| ||||| ||| ||| ||||||||||||| |||||||||    |||  |||||||||||| ||||| ||  |||||||||||||    
T  40709391 ttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacacc 40709294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 49946629 - 49946682
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaa 456  Q
    |||||||||||| |||||||||||||||||||  ||||| || ||||| |||||    
T  49946629 gagggtttatttgtcatttttaaattacggacactataaaatatttttttaaaa 49946682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 595
Target Start/End: Complemental strand, 7444549 - 7444481
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||| ||||  || |||| |||||||    
T  7444549 tccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 35349504 - 35349536
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||| ||||||||||||||||||||||    
T  35349504 ggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 38510067 - 38510135
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||| |||||||| ||||| |||||  |||| ||||||||||||||||||  |  ||||||||||||    
T  38510067 tccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 40094973 - 40095005
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||| ||||||||||||||||||||||    
T  40094973 ggagggtttacttttcatttttaaattacggac 40095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 403 - 431
Target Start/End: Original strand, 43552037 - 43552065
Alignment:
Q  403 gagggtttatttttcatttttaaattacg 431  Q
    |||||||||||||||||||||||||||||    
T  43552037 gagggtttatttttcatttttaaattacg 43552065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 49832583 - 49832659
Alignment:
Q  398 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||| | ||| ||||| |||||||||||| ||  ||||||  |||||||  |||||||| |||||||||||||    
T  49832583 gagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattga 49832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 50135090 - 50135026
Alignment:
Q  151 aaactaaagggggtgtgagtgtcattaagtaaaacctcaaggaaggtaaatgcaattttctcttt 215  Q
    |||||| |||||||||||||||| || |   ||||||||||| ||||||||| | ||||||||||    
T  50135090 aaactagagggggtgtgagtgtcttttaagcaaacctcaagggaggtaaatgtagttttctcttt 50135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 3e-56; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 360 - 596
Target Start/End: Original strand, 13634714 - 13634953
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13634714 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaataacggactatataacatgtttttctaaaataa 13634808  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||| ||||||||||  | ||||        |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  13634809 attatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaa 13634908  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
     |  |||| ||||||||||||||||||  || |||||||||||||    
T  13634909 cccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 387 - 601
Target Start/End: Original strand, 7544161 - 7544383
Alignment:
Q  387 ggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---- 482  Q
    ||||| || ||||| |||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||        
T  7544161 ggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatga 7544260  T
Q  483 ----ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 578  Q
        |||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||  |||| | ||||||||||||||||    
T  7544261 ttgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaac 7544360  T
Q  579 tttccatccaaacacaccataaa 601  Q
      |||||||||||||||| ||||    
T  7544361 cctccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 396 - 601
Target Start/End: Original strand, 10650463 - 10650661
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttatcatgttaat 495  Q
    ||||| ||||| |||| |||| |||||||||||||||||  ||| | |||||||||||||||||||||||||||||||| ||       |||||| ||||    
T  10650463 gggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaagt-------atcatggtaat 10650555  T
Q  496 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||| | ||||||||||||| |||||||| ||||||||||||    
T  10650556 atgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttcaatccaaacacac 10650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 391 - 596
Target Start/End: Original strand, 26414922 - 26415136
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------t 482  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||        |    
T  26414922 gagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgt 26415021  T
Q  483 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaacttt 581  Q
    ||||||||||||||||||||||||||| |||| |||||||||| || |||| |||||||||||||||||||  |||| ||| || |||||| |||||  |    
T  26415022 ttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccct 26415121  T
Q  582 ccatccaaacacacc 596  Q
    |||||||||||||||    
T  26415122 ccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 360 - 596
Target Start/End: Original strand, 16938482 - 16938721
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  16938482 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataa 16938576  T
Q  460 attaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||||||||  | ||        |||||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||  |||    
T  16938577 attaagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaa 16938676  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||  |||| ||| |||| |||||||||  ||||||||||||||||    
T  16938677 accctcccctccattcctctcctaaaccctccatccaaacacacc 16938721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 424 - 596
Target Start/End: Complemental strand, 8503017 - 8502837
Alignment:
Q  424 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattta--------tcatgttaatatgttaactttttaaaaaat 515  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||        |||| ||||| |||||||||||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  516 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||| | ||||||||||||||||||||||| |||  |||||||| ||||| || |||||  ||||||||||||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacacc 8502837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 397 - 593
Target Start/End: Original strand, 36363067 - 36363271
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 488  Q
    |||| |||| ||||| ||||| | |||||| |||| ||||||||||||||||||||||||||||| |||||| ||||| || ||||        ||||||    
T  36363067 ggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatca 36363166  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 588  Q
    || ||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |||  || | ||||||||||||||||||  ||||||||    
T  36363167 tgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatcca 36363266  T
Q  589 aacac 593  Q
    |||||    
T  36363267 aacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 403 - 596
Target Start/End: Complemental strand, 28279680 - 28279478
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 493  Q
    ||||||||| ||||| ||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||| || ||||        |||||||||||    
T  28279680 gagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaagtgtgattgaagtattatatgatcatttatcatgtta 28279581  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    ||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||  ||| |  || ||||| ||| ||||  |||||||||||||    
T  28279580 atatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccctccatccaaacac 28279481  T
Q  594 acc 596  Q
    |||    
T  28279480 acc 28279478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 397 - 546
Target Start/End: Original strand, 9856915 - 9857072
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 488  Q
    |||| |||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||        ||||| |    
T  9856915 ggaggggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttatta 9857014  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  9857015 tgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 396 - 596
Target Start/End: Original strand, 37606929 - 37607136
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    |||||| ||| ||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||||||  ||||||||| || ||||        |||||    
T  37606929 gggagatgagagtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatc 37607027  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |||||||    
T  37607028 atgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatcc 37607127  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  37607128 aaacacacc 37607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 553
Target Start/End: Complemental strand, 4373770 - 4373611
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 493  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||  | ||||        |||||||||||    
T  4373770 ggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgatcatttatcatgtta 4373671  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  4373670 atatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaac 4373611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 403 - 601
Target Start/End: Original strand, 10476067 - 10476275
Alignment:
Q  403 gagggtttatttttcatttttaaa-ttacggactatata-acatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtt 492  Q
    ||||||||| ||||| |||||||| |||| || |||||| |||||||||||||||||||||||||||||||||| || ||||        ||||||| ||    
T  10476067 gagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaattaagtgtgattgaagtattatataatcgtttatcatctt 10476166  T
Q  493 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    ||||||||   ||||| | ||||||||||||||   |||||||||||||| | ||||||||| |||| ||||||||||||||||||  ||||||||||||    
T  10476167 aatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaaca 10476266  T
Q  593 caccataaa 601  Q
    |||| ||||    
T  10476267 caccctaaa 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 408 - 595
Target Start/End: Complemental strand, 9798810 - 9798615
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 499  Q
    |||| ||||| |||| ||||||| || |||||||||||||||||| ||||||||||| ||||||||| || ||||        || ||||||||| || |    
T  9798810 tttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaatat 9798711  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||  |||||||||   |||||||||||||||    
T  9798710 tgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 362 - 553
Target Start/End: Complemental strand, 36392388 - 36392195
Alignment:
Q  362 gtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 461  Q
    ||||||||||||  |||||| ||||||||||||| || | |     ||||| |||| ||||||||||||||||||||||| || |||| |||||||| ||    
T  36392388 gtgtttggattgagggtttaggaggggaagagagcggtgtg-----tttatatttcgtttttaaattacggactatataatatatttt-ctaaaatagat 36392295  T
Q  462 taagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||| || ||||        ||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||    
T  36392294 taagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaac 36392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 408 - 553
Target Start/End: Complemental strand, 10072845 - 10072692
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 499  Q
    |||| ||||| |||||||||||| |||  |||||||||||||||||||||||||||||| ||||||| || ||||        |||||||||||||||||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 10072746  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||||||||  |  |||||||| |||||||||||||    
T  10072745 taactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaac 10072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 596
Target Start/End: Original strand, 37779139 - 37779345
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    |||||| ||| ||||| ||||| ||||||||||| ||||||| ||| |||||||| ||||||||||||  ||||||||| || ||||        |||||    
T  37779139 gggagatgagagtttacttttcgtttttaaattaaggactat-taa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatc 37779236  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |||||||    
T  37779237 atgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctccatcc 37779336  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  37779337 aaacacacc 37779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 496 - 596
Target Start/End: Original strand, 1657955 - 1658055
Alignment:
Q  496 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  596 c 596  Q
    |    
T  1658055 c 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 39984654 - 39984476
Alignment:
Q  16 atgatggatttttcttcgatttcttgtaaggaatctcatactcagtg-caattttagaggtgccatggaaggaagcttgaaagtttggtaac---ggtga 111  Q
    ||||||||||||||||||||||||||||||||| || | | | |||| |||||||||||||||||||||||||||| |  ||||||||||||   |||||    
T  39984654 atgatggatttttcttcgatttcttgtaaggaacctgagaatgagtgtcaattttagaggtgccatggaaggaagcatagaagtttggtaacggtggtga 39984555  T
Q  112 ctaacaaagtaaacacgaggggaggtaaatg--nnnnnnncaaactaaagggggtgtgagtgtcattaagtaaaacctc 188  Q
    |||||| ||||| || |||||||||||||||         |||| || ||||||||| |||||||||||||||||||||    
T  39984554 ctaacagagtaagcatgaggggaggtaaatgtttttttttcaaattagagggggtgtaagtgtcattaagtaaaacctc 39984476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 482 - 596
Target Start/End: Complemental strand, 14245204 - 14245090
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||| ||||||||||   |||| ||||||||||||||||||  |    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  582 ccatccaaacacacc 596  Q
    | |||||||||||||    
T  14245104 caatccaaacacacc 14245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 407 - 596
Target Start/End: Original strand, 37551453 - 37551647
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 498  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| |||||||||| || ||||        ||||||||||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  ||||||||||||||||    
T  37551552 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacacc 37551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 407 - 596
Target Start/End: Original strand, 37654283 - 37654477
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 498  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| |||||||||| || ||||        ||||||||||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  ||||||||||||||||    
T  37654382 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacacc 37654477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 393 - 547
Target Start/End: Complemental strand, 20147088 - 20146917
Alignment:
Q  393 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgt----------gattgaggtgttat 482  Q
    |||||||  |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||          ||||||  | ||||    
T  20147088 gaggggaagggagggtttacttttcatttttaaattacggattatata-catgtttttctaaaataaattaagtgtaattaagtgtgattgaaatattat 20146990  T
Q  483 --------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
            |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  20146989 atgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 360 - 552
Target Start/End: Complemental strand, 16502033 - 16501836
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt-ctaaaata 458  Q
    ||||||||||||||  |||||| ||||| ||||||||||    |||   ||| ||||  |||||||||||||||||||||| ||| ||||| ||||||||    
T  16502033 gtgtgtttggattgagggtttaggagggaaagagagggg----gagaaattacttttattttttaaattacggactatatatcatattttttctaaaata 16501938  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||| |||||||||| | || ||||        |||| |||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||| ||    
T  16501937 aatcaagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaacta 16501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 553
Target Start/End: Complemental strand, 2550592 - 2550397
Alignment:
Q  361 tgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 460  Q
    |||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||  | |||||||||||||||||||||||| ||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaagattcggactatataacatgtttttctataataaa 2550498  T
Q  461 ttaagtgtgattgaggtgtta--------tttatcatgttaatatgttaact-ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||| |||||||||| || |||        ||||||||| || ||| |||| | ||| |||||| || ||||||| || ||||||||||||||||||||||    
T  2550497 ttacgtgtgattgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaa 2550399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 22022907 - 22022962
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22022907 tttttaaattacggactatataacatatttttctaaaataaattaagtgtgattga 22022962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 20513561 - 20513491
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||||||    
T  20513561 tttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaagtaaa 20513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 43535 - 43607
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaa-tttaaaaatgaaaagtaaac 553  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  43535 tttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagtaaac 43607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 402 - 472
Target Start/End: Original strand, 11756917 - 11756987
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 472  Q
    |||| |||| |||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  11756917 ggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgtgatt 11756987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 552
Target Start/End: Complemental strand, 17024393 - 17024270
Alignment:
Q  437 tataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatc 528  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||        || ||||||||||||| |||||||||||| || |||||||| | ||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtc 17024294  T
Q  529 cgtaatttaaaaatgaaaagtaaa 552  Q
     | |||||||||||||||||||||    
T  17024293 tgcaatttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 22023495 - 22023568
Alignment:
Q  482 tttatcatgttaatatgttaac-tttttaaaaaatatttcat-agtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||| |||||||||||||||    
T  22023495 tttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaac 22023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 32727893 - 32727822
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||   |||||||||||||||||||| || ||||||||||||||| ||| ||||||    
T  32727893 tttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaac 32727822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 519
Target Start/End: Original strand, 42681510 - 42681618
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtt--------atttatcatgttaatatgttaactttttaa 510  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | || ||        ||||||||||||| ||| |||| |||||||    
T  42681510 ttttttaattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaa 42681609  T
Q  511 aaaatattt 519  Q
    |||||||||    
T  42681610 aaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 14245202 - 14245288
Alignment:
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||| |||||| ||| |||||||||||||||||||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaa 464  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 474
Target Start/End: Original strand, 14681520 - 14681581
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||| |||||||||||| || |||||||||||||||| ||||||||||||| |||||||||    
T  14681520 ttttcttttttaaattacagattatataacatgtttttttaaaataaattaaatgtgattga 14681581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 474
Target Start/End: Original strand, 40815300 - 40815408
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||||||||| || |||| ||||||||| || |  ||||||   |||| ||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  40815300 gtgtgtttggattgaagatttaggaggggaagggaag--agagga---tttacttttcttttttaaattacagactatataacatgtttttataaaataa 40815394  T
Q  460 attaagtgtgattga 474  Q
    |  ||||||||||||    
T  40815395 a-aaagtgtgattga 40815408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 595
Target Start/End: Original strand, 11757070 - 11757144
Alignment:
Q  521 atagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||| ||||||||||||||||||||  |||||  |||| |||||||||||| |||||  |||||||||||||||    
T  11757070 atagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 474
Target Start/End: Complemental strand, 39966150 - 39966084
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| | |||||||||||  ||||||||    
T  39966150 tttattttttatttttaaattacggattatataacatattttttttaaataaattaaacgtgattga 39966084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 13634782 - 13634713
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  13634782 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 553
Target Start/End: Complemental strand, 17780340 - 17780279
Alignment:
Q  493 aatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||||||    
T  17780340 aatatgttaactttttaaaaaaacattttataatatccgtaatttaaaactgaaaagtaaac 17780279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 26414964 - 26414895
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||  || |||||||||||||    
T  26414964 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacacc 26414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 4423336 - 4423404
Alignment:
Q  479 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    |||||||| | ||||||||| ||| |||| ||||||||||||||| | | |||||||||||||||||||    
T  4423336 ttatttattacgttaatatgctaaattttaaaaaaatatttcataatgttcgtaatttaaaaatgaaaa 4423404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 598
Target Start/End: Complemental strand, 10650517 - 10650427
Alignment:
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccc--ttcccctcctaaactttccatccaaacacaccat 598  Q
    ||||| |||||||||| |||||||||||||||| |||||||||   |||| ||||  |||||||||||||   ||||||||||| ||||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcaccat 10650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 34980879 - 34980812
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| |||||| |||  | || |||||||||||||||||| ||| |||||||||||||    
T  34980879 cgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 1658054 - 1657969
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgttttt 450  Q
    |||||||||||| |  |||||| ||||||||     ||||| |||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  1658054 gtgtgtttggatggagggtttaggaggggaa-----gggaggggagggtttacttttcatttttaaattacggacactataaaatgttttt 1657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 14245287 - 14245218
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     ||||| |||||||||||||||||||||||    
T  14245287 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 11419302 - 11419237
Alignment:
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||| ||||||| ||||| |||| ||| | ||| |||||| ||||||||||||||||    
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaac 11419237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 2556167 - 2556215
Alignment:
Q  505 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  2556167 ttttaaaaaatattttatatcatccataatttaaaaatgaaaagtaaac 2556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 468
Target Start/End: Original strand, 34980813 - 34980916
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||||||||| ||||||| ||||||||| ||||| ||     |||| | |||| |||||||||||||| || |  ||| || ||||| ||||||||    
T  34980813 gtgtgtttggattgaaggtttaggaggggaagggagggaag-----ggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataa 34980907  T
Q  460 attaagtgt 468  Q
    |||||||||    
T  34980908 attaagtgt 34980916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 43410 - 43481
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaataaattaagt 466  Q
    |||||| |||| |||| || || ||||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  43410 gggagatgaggatttacttctcttttttaaattagggattatataacatgttttttttaaaataaattaagt 43481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 594
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  535 ttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 14684692 - 14684614
Alignment:
Q  398 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttcta--aaataaattaagtgtgattga 474  Q
    |||||||||| ||| ||||| ||||| |||||||| | |||||| |||||||| |   |||||||||||||||||||||    
T  14684692 gagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaataaattaagtgtgattga 14684614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 29002322 - 29002251
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||   |||  |||||| |||| ||||| | | |||||||||||||||||||||||    
T  29002322 tttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaac 29002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 8551659 - 8551621
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagagggg 398  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  8551659 gtgtgtttggattgaaggtttaggaggggaagagagggg 8551621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 596
Target Start/End: Complemental strand, 10476090 - 10476028
Alignment:
Q  534 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||| |||||||||||  || ||||||||||||||||||||  || || ||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacacc 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 12600745 - 12600703
Alignment:
Q  358 aagtgtgtttggattggaggtttatgaggggaagagaggggag 400  Q
    |||||||||||||||  ||||||| ||||||||||||||||||    
T  12600745 aagtgtgtttggatttaaggtttaggaggggaagagaggggag 12600703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 33744260 - 33744190
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||||||||| |||||||||||  |||| ||||||| || ||| |||  |||||||||||||||| ||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaaa 33744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 596
Target Start/End: Complemental strand, 40815365 - 40815299
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| ||||||||||   || | |||||||||||||||||  ||| |||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacacc 40815299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 16938550 - 16938481
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||| ||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  16938550 tccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 16938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 392 - 472
Target Start/End: Original strand, 13298296 - 13298376
Alignment:
Q  392 agaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgatt 472  Q
    ||||||||| ||||   ||| ||||| |||||||||| ||||| |||||| | ||||||  || |||||||||||||||||    
T  13298296 agaggggaggggagaacttacttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagtgtgatt 13298376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 7e-54; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 396 - 592
Target Start/End: Complemental strand, 31543282 - 31543078
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    ||||| |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||        ||||     
T  31543282 gggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgaccgtttatg 31543183  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||||||| |||||  |||||||    
T  31543182 atgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatcc 31543083  T
Q  588 aaaca 592  Q
    |||||    
T  31543082 aaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 391 - 590
Target Start/End: Complemental strand, 11575621 - 11575415
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-------- 482  Q
    |||| ||||| |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| | || ||||            
T  11575621 gagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgt 11575522  T
Q  483 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 582  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||  |||| |||||||| ||||||||   ||    
T  11575521 ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctccc-tcccttcctctcctaaatcctc 11575423  T
Q  583 catccaaa 590  Q
    ||||||||    
T  11575422 catccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 402 - 595
Target Start/End: Original strand, 16652989 - 16653190
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 493  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||        |||||  |||||    
T  16652989 ggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtta 16653088  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    ||||||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||  || | |||||||||||| |||||  | |||||||||||    
T  16653089 atatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacac 16653188  T
Q  594 ac 595  Q
    ||    
T  16653189 ac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 596
Target Start/End: Original strand, 11785561 - 11785768
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatca 488  Q
    |||| |||| ||||| ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| || |||||| || ||||        ||||||    
T  11785561 ggaggggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatca 11785660  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 588  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||  ||||  |||| || ||| |||||||||||  ||||||||    
T  11785661 tgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatcca 11785760  T
Q  589 aacacacc 596  Q
    ||||||||    
T  11785761 aacacacc 11785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 403 - 552
Target Start/End: Original strand, 1281184 - 1281341
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaa 494  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| || ||||        |||| |||||||    
T  1281184 gagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgtttattatgttaa 1281283  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1281284 tatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaa 1281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 376 - 596
Target Start/End: Original strand, 31738442 - 31738665
Alignment:
Q  376 ggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgag 475  Q
    |||||| |||||||||||| |||||||     ||| |||||  |||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||     
T  31738442 ggtttaggaggggaagagaagggagag-----ttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaa 31738536  T
Q  476 gtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 567  Q
    || ||||        |||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||  |||||  |||| |  ||||    
T  31738537 gtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttc 31738636  T
Q  568 ccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||  ||||||||||||||||    
T  31738637 ccctcctaaaccctccatccaaacacacc 31738665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 553
Target Start/End: Complemental strand, 1027067 - 1026894
Alignment:
Q  387 ggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---- 482  Q
    ||||| || ||||| | |||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||        
T  1027067 ggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagtatgattgaagtattatatga 1026969  T
Q  483 ----ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
        ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||    
T  1026968 tcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaac 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 393 - 553
Target Start/End: Complemental strand, 7503167 - 7502999
Alignment:
Q  393 gaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------ttt 484  Q
    |||||||| |||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | || |||        |||    
T  7503167 gaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgattgttt 7503068  T
Q  485 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||||||||||||||| |||| |||||||||| |  |||||||||||||| |||| ||||    
T  7503067 atcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaac 7502999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 360 - 594
Target Start/End: Complemental strand, 30479958 - 30479721
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||||||| ||||      |||| |||||||||| ||||| |||||||| ||| ||||||||  ||||||||||||||||||    
T  30479958 gtgtgtttggattgagggtttatgagaggaat-----ggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataa 30479864  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    || |||||||||||| || ||||        ||||||  |||||||||||||||||||||| | |||||||||| || |||||||||||||||||||| |    
T  30479863 atcaagtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtga 30479764  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||  |||| ||| | |||||||||||   ||||||||||||||    
T  30479763 actctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 407 - 602
Target Start/End: Complemental strand, 3727054 - 3726859
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttatttatcatgttaatatgttaacttt 506  Q
    ||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||  | |||| |  |   |||  ||||||||| |    
T  3727054 gtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcatgttaactat 3726955  T
Q  507 ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    |||||||| ||| ||| || ||||||||||||||||||||| |||||  |||  ||||||||||||||||||  |||||||||||||||| |||||    
T  3726954 ttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccctaaaa 3726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 399 - 553
Target Start/End: Complemental strand, 29358547 - 29358385
Alignment:
Q  399 agaggagggttta-tttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcat 489  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||| || |||        ||||| ||    
T  29358547 agaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataat 29358448  T
Q  490 gttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29358447 gttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaac 29358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 408 - 559
Target Start/End: Original strand, 30664407 - 30664566
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgt 499  Q
    |||||||||| |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||| || ||||        ||||||| |||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 559  Q
    ||||||||||||||||||||  || | |||||||||||||| |||||| |||||||||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaacattccc 30664566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 396 - 554
Target Start/End: Original strand, 7979174 - 7979340
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatc 487  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||         |||||||||    
T  7979174 gggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattatatgattatttatc 7979273  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaaca 554  Q
    ||||||||| |||||  |||||| ||| ||||||  || ||||||||||||||||||||||||||||    
T  7979274 atgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaaca 7979340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 488 - 596
Target Start/End: Original strand, 34634277 - 34634385
Alignment:
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| | |||  || ||||||||||||||||||||| |||||||    
T  34634277 atgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatcc 34634376  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  34634377 aaacacacc 34634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 396 - 592
Target Start/End: Original strand, 36308876 - 36309081
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttc-taaaataaattaagtgtgattgaggtgttat--------ttat 486  Q
    ||||| |||||||| ||||||| || ||||| ||  |||||||||||||||||||  ||||||||| ||||||||||||| || ||||        ||||    
T  36308876 gggaggggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttat 36308975  T
Q  487 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 586  Q
    |||||||||||||| |||||| |||| |||||||| | | | ||||||||||| |||||||||||||  |||| ||||||||||||||||||  ||||||    
T  36308976 catgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatc 36309075  T
Q  587 caaaca 592  Q
    ||||||    
T  36309076 caaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 547
Target Start/End: Original strand, 6315119 - 6315255
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaa 510  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||        ||||||| ||||||||||||| ||||| |    
T  6315119 ttttttaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaattttttta 6315218  T
Q  511 aaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    |||| |||||||||| |||||| ||||||||||||||    
T  6315219 aaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 404 - 553
Target Start/End: Complemental strand, 37923280 - 37923123
Alignment:
Q  404 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaat 495  Q
    |||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |  | ||||        |||||||||||||    
T  37923280 agggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaat 37923181  T
Q  496 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    || |||||| ||||||||| |||||||||| | | |||||||||||||||||||||||    
T  37923180 attttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 37923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 400 - 595
Target Start/End: Original strand, 11033455 - 11033659
Alignment:
Q  400 gaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgt 491  Q
    |||| ||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||    |||        ||||||||||    
T  11033455 gaggggggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgtttatcatgt 11033554  T
Q  492 taatatgttaacttttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 590  Q
    ||||||||||| ||||| |||||| |||||||| ||| | |||||||||| |||||||||||  ||| | ||||||| ||||||||||  |||||| |||    
T  11033555 taatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatcttctcctcccttctcctcctaaaccctccatctaaa 11033654  T
Q  591 cacac 595  Q
     ||||    
T  11033655 gacac 11033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 360 - 547
Target Start/End: Complemental strand, 9718720 - 9718530
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| |||| |||| ||||||| ||     |||| ||||| ||||||||||| | |||||||||||| ||||||||||||      
T  9718720 gtgtgtttggattgagggtttaggaggagaagggaggggaaag-----tttacttttcttttttaaattatgaactatataacatatttttctaaaattc 9718626  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    ||||| ||||||||| || ||||        |||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  9718625 attaattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 402 - 536
Target Start/End: Original strand, 37032419 - 37032561
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 493  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | || |||        |||||||| |||    
T  37032419 ggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatctta 37032518  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaattt 536  Q
    ||||||||||||||||||||| | ||| |||| ||||||||||    
T  37032519 atatgttaactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 568
Target Start/End: Original strand, 2248455 - 2248666
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||   ||||| ||||||||| ||||||||||     || | ||| | ||||||||||||||  |||||||||||||||||||||||||    
T  2248455 gtgtgtttggattgagagtttaggaggggaagggaggggagag-----ttcaatttccttttttaaattacggtttatataacatgtttttctaaaataa 2248549  T
Q  460 attaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    || |||||||||||   | ||||        |||  ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||| |    
T  2248550 atcaagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtga 2248649  T
Q  552 acattcccatcccttcc 568  Q
    ||  |||| ||||||||    
T  2248650 accctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 403 - 596
Target Start/End: Complemental strand, 41103709 - 41103506
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaa 494  Q
    ||||||||| ||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||        ||||||||||||     
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttat 41103610  T
Q  495 tatgttaactttttaaaaaatatttcatagtatccgtaa--tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    | | |||| ||||| |||||  ||||||||| ||| |||  |||||||| |||||  ||||  |||| || |||||||||||||||  ||||||||||||    
T  41103609 tgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaaca 41103510  T
Q  593 cacc 596  Q
    ||||    
T  41103509 cacc 41103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 546
Target Start/End: Original strand, 28083792 - 28083934
Alignment:
Q  412 tttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaac 503  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||  || |||        ||||||||||| | ||||||||    
T  28083792 tttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaac 28083891  T
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    | ||||||||| || ||||||||||||||||||||||| ||||    
T  28083892 tctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 482 - 595
Target Start/End: Complemental strand, 29691038 - 29690925
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| |||  ||| |||||||||||||||  || | || |||  |||||||||||||    
T  29691038 tttatcatgttaatatgttaacttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaactctctcgtctcttttcctcctaaacttt 29690939  T
Q  582 ccatccaaacacac 595  Q
     |||||||||||||    
T  29690938 tcatccaaacacac 29690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 596
Target Start/End: Complemental strand, 40990383 - 40990183
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 498  Q
    |||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| || ||||        ||||||||||||||||    
T  40990383 gtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgttaatatg 40990284  T
Q  499 ttaacttttt--aaaaaatatttcatagtatccgt-aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||||| |||  |||||| |||||||||| ||  | |||| ||||||||||  |||||  |||| ||| |||  |||| ||||  |||||||||||||||    
T  40990283 ttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcctttcttctcccaaaccctccatccaaacacac 40990184  T
Q  596 c 596  Q
    |    
T  40990183 c 40990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 474
Target Start/End: Complemental strand, 42650540 - 42650468
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42650540 ggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattga 42650468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 360 - 553
Target Start/End: Complemental strand, 4247761 - 4247563
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcattttt-aaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||| ||||||| ||||||||| ||||  ||||||||||||| ||||| ||||| |||||| | | |||   | |||||||| |||||||    
T  4247761 gtgtgtttggattgaaggtttaggaggggaagggaggt-agaggagggtttacttttctttttttaaattatgaattatt--atatgtttttttaaaata 4247665  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    |||||||| ||||| | || ||||        |||||||| |||||||||||||| ||||||||||||| | |||  ||||||||||||||| |||||||    
T  4247664 aattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagt-gccgtaatttaaaaataaaaagta 4247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 43732860 - 43732929
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  43732860 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 43732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 491 - 578
Target Start/End: Original strand, 10028259 - 10028347
Alignment:
Q  491 ttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 578  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||| | ||||||||||  |||| || ||||| |||||||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaac 10028347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 514
Target Start/End: Original strand, 33922560 - 33922680
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggt--------gttatttatcatgtta 493  Q
    |||| ||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| ||| ||||||| ||         || ||||||||| ||    
T  33922560 ggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtttatcatgata 33922659  T
Q  494 atatgttaactttttaaaaaa 514  Q
    |||||||||||||||||||||    
T  33922660 atatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 474
Target Start/End: Original strand, 10028156 - 10028222
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  10028156 tttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaagtgtggttga 10028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 552
Target Start/End: Original strand, 13405027 - 13405178
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgtta--- 501  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||||||  | | |||||  | |||        ||||||||||||||| ||||       
T  13405027 ttttcttttttaaataacagactatataacatgtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgttaatt 13405126  T
Q  502 -actttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
     |||||| |||||||||||  || | ||||||||||||||||||||||||||    
T  13405127 cacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagtaaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 9718656 - 9718730
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaa 605  Q
    ||||||||||| ||||||||||| ||||| ||||||| ||||||||||  || ||||||||||||| | ||||||    
T  9718656 taatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccctgaaacaa 9718730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 592
Target Start/End: Complemental strand, 1281214 - 1281149
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    ||||||||||||||| |||||||||||  || ||||||||||||||||||||  || |||||||||    
T  1281214 tccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 595
Target Start/End: Original strand, 16024327 - 16024394
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||   |||||||||||||||    
T  16024327 tccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 31543249 - 31543319
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||||||  || ||| ||||||||| ||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaaa 31543319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 35694862 - 35694828
Alignment:
Q  491 ttaatatgttaactttttaaaaaatatttcatagt 525  Q
    |||||||||||||||||||||||||||||||||||    
T  35694862 ttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 468
Target Start/End: Complemental strand, 12022330 - 12022281
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  12022330 tttttaaattacggacaatgtaaaatgtttttttaaaataaattaagtgt 12022281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 596
Target Start/End: Complemental strand, 2248522 - 2248454
Alignment:
Q  528 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| | ||| | |||  |||| ||||||||||||||||||| || |||||||||||||    
T  2248522 ccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 596
Target Start/End: Original strand, 8815316 - 8815383
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||| |||||| |||  |||| ||||| ||||||||||||  || |||||||||||||    
T  8815316 cgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacacc 8815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 596
Target Start/End: Complemental strand, 24243164 - 24243052
Alignment:
Q  481 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 580  Q
    ||||||||||||| ||| | || ||||||||| | |||| ||||| || ||||||| ||||||||||||||    |||| ||||||||| || ||||||     
T  24243164 atttatcatgttattatttcaa-tttttaaaagacattttatagtgtc-gtaatttcaaaatgaaaagtaagtcatcccttcccttccc-tcttaaactc 24243068  T
Q  581 tccatccaaacacacc 596  Q
    ||||||||||||||||    
T  24243067 tccatccaaacacacc 24243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 3726897 - 3726935
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  3726897 gggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 551
Target Start/End: Complemental strand, 5562058 - 5562012
Alignment:
Q  505 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||||| || ||| ||| |||||||||||||||||||||||    
T  5562058 ttttaaaaaataatttatattatacgtaatttaaaaatgaaaagtaa 5562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 7394636 - 7394701
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||    
T  7394636 cgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 602
Target Start/End: Complemental strand, 30365219 - 30365126
Alignment:
Q  509 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    ||||||||||| ||  | | |||||||||||||| |||||| |||  |||| ||| ||| ||||||||||  || ||||||||||||| |||||    
T  30365219 aaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccctaaaa 30365126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 31543106 - 31543143
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacgga 433  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  31543106 gggaggggagggtttacttttcatttttaaattacgga 31543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 474
Target Start/End: Complemental strand, 38198241 - 38198181
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||||||||||||||||| |||  |||||  ||||||| |||||| ||||||||||||||||    
T  38198241 ttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattga 38198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 42919879 - 42919912
Alignment:
Q  505 ttttaaaaaatatttcatagtatccgtaatttaa 538  Q
    ||||||||||||||| ||||||||||||||||||    
T  42919879 ttttaaaaaatattttatagtatccgtaatttaa 42919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 602
Target Start/End: Original strand, 7503126 - 7503202
Alignment:
Q  526 atccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 602  Q
    |||| ||||||||||| |||||||||||  |||| |||| |||||||| |||   || ||||||||||||| |||||    
T  7503126 atccataatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaaa 7503202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||||||||||||||||  |||| ||||||| | ||||||||  |  |||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 396 - 596
Target Start/End: Complemental strand, 41497167 - 41496959
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatc 487  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||        |||||    
T  41497167 gggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatc 41497068  T
Q  488 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 587  Q
    ||||||||||||||| ||||||||||| ||||| || | |||||||||||||||| |||||||||   |||| ||||||||||||||||||  |||||||    
T  41497067 atgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatcc 41496968  T
Q  588 aaacacacc 596  Q
    |||||||||    
T  41496967 aaacacacc 41496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 359 - 553
Target Start/End: Complemental strand, 33655350 - 33655153
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||||  |||||| |||||||||||||| |||     |||||| ||||| ||||||||||| || |||||||||||||||||||||||||    
T  33655350 agtgtgtttggattgagggtttaggaggggaagagaggcgag-----ggtttacttttcttttttaaattatgggctatataacatgtttttctaaaata 33655256  T
Q  459 aattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    |||||||||||||||| || ||||        |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33655255 aattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagta 33655156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 407 - 577
Target Start/End: Complemental strand, 24970364 - 24970187
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatg 498  Q
    |||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||        |||||| |||||||||    
T  24970364 gtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatg 24970265  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| | |||||||||||||||    
T  24970264 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatcatcccct-ccttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 396 - 596
Target Start/End: Original strand, 47390889 - 47391098
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat---------ttat 486  Q
    ||||| |||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||| || ||||         ||||    
T  47390889 gggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattatatgacttgtttat 47390988  T
Q  487 catgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatc 586  Q
    ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||  ||||  |||| |||||||||||| |||||  ||||||    
T  47390989 catgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatc 47391088  T
Q  587 caaacacacc 596  Q
    ||||||||||    
T  47391089 caaacacacc 47391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 406 - 596
Target Start/End: Complemental strand, 40196732 - 40196534
Alignment:
Q  406 ggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatat 497  Q
    |||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||        |||||| ||| ||||    
T  40196732 ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatat 40196633  T
Q  498 gttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| |||| |||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||||| ||||  ||||||||||||||||    
T  40196632 gttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacacc 40196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 552
Target Start/End: Complemental strand, 34235219 - 34235053
Alignment:
Q  397 ggagaggagggt--ttatttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaggtgttat--------tta 485  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| || ||||        |||    
T  34235219 ggagaggagggtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgttta 34235120  T
Q  486 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  34235119 tcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 404 - 595
Target Start/End: Original strand, 42306376 - 42306571
Alignment:
Q  404 agggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat----ttatcatgttaatatgt 499  Q
    |||||||  ||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||  || ||||    |||| | |||||||||     
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatatgtttatgaggttaatatgc 42306475  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||  |||| ||  ||||||||||||||  || ||||||||||||    
T  42306476 taactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 360 - 601
Target Start/End: Complemental strand, 13771187 - 13770945
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    |||||||| |||||  |||||| ||||||||| |||| |||||     |||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13771187 gtgtgtttagattgagggtttaggaggggaagggaggtgagag-----tttacttttcgtttttaaattacggactatataacatgtttttttaaaataa 13771093  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||||||   ||||||        |||||||||||||||||||||||||||  | ||||||| ||||| |||||||||||||||| | ||||||    
T  13771092 attaagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaacttttt--ataatattttatagtgtccgtaatttaaaaataataagtaa 13770995  T
Q  552 acattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |   |||| |||||||||||||||||   || ||||||||||||| ||||    
T  13770994 atcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaa 13770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 25887195 - 25887417
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||||||||||||| ||||||||     | ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  25887195 gtgtgtttggattgagggtttatgaggggaagggaggggag-----gatttgtttttcttttataaatcacggactatataacatgtttttctaaaataa 25887289  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttt-taaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    ||||||||||||||  || |||        |||||||| |||||||||||||||||  |||||| |||||||  | | |||||||||||||||||| |||    
T  25887290 attaagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgta 25887389  T
Q  551 aacattcccatcccttcccctcctaaac 578  Q
    |||  |||| ||||||||||||||||||    
T  25887390 aactctcccctcccttcccctcctaaac 25887417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 1051739 - 1051520
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||  ||||||   |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  1051739 gtgtgtttggattgagggtttaggaggggaagggagg--agagga---tttatttttcttttttaaattacgaactatataacctgtttttctaaaataa 1051645  T
Q  460 attaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||||||||||||||| |  |||        ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||| || |    
T  1051644 attaagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgtta 1051547  T
Q  552 acattcccatcccttcccctcctaaac 578  Q
    ||  |||| ||  ||||||||||||||    
T  1051546 accctcccctctattcccctcctaaac 1051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 595
Target Start/End: Original strand, 43230276 - 43230476
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgtta 493  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  |||        ||||||||||||    
T  43230276 ggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgtta 43230375  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 593  Q
    |||||||||||||| |||||| | |||| ||| |||||||||||||||| ||||||||||  |||| | | |||| ||| |||||  | |||||||||||    
T  43230376 atatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccctacatccaaacac 43230474  T
Q  594 ac 595  Q
    ||    
T  43230475 ac 43230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 482 - 596
Target Start/End: Original strand, 18231714 - 18231828
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||   |||| ||||||||||||||||||  |    
T  18231714 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgct 18231813  T
Q  582 ccatccaaacacacc 596  Q
    |||||||||||||||    
T  18231814 ccatccaaacacacc 18231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 482 - 592
Target Start/End: Complemental strand, 4833647 - 4833537
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||| |||||||||||| |||| |||||||||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||  |    
T  4833647 tttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccct 4833548  T
Q  582 ccatccaaaca 592  Q
    |||||||||||    
T  4833547 ccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 363 - 601
Target Start/End: Original strand, 41008188 - 41008425
Alignment:
Q  363 tgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaataaat 461  Q
    |||||||||||  |||||  ||||||||| |||||||||      ||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaa-----tttgtttttcttttttaaattacggactatataacatgttttttttaaaataaat 41008282  T
Q  462 taagtgtgattgaggt------gttatttatcatgttaatatgttaacttttta--aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||||||||| ||       || |||||||||||||||||||||||||| |  | ||| |  |||||||||||||||||||||||||||| ||||||    
T  41008283 taagtgtgattgaagttatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaac 41008382  T
Q  554 attcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
      ||   | ||||||||||||||||  | |||||||||||||| ||||    
T  41008383 --tc---ttccttcccctcctaaaccctgcatccaaacacaccctaaa 41008425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 427 - 596
Target Start/End: Complemental strand, 45940835 - 45940658
Alignment:
Q  427 ttacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatt 518  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| ||||| || ||||        |||| ||||||||||  || |||| ||||||| |||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  519 tcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||| |||||||| ||||||| |||||||||| || || ||||||||||| |||||| |||||||||||||||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttccatccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 39856106 - 39856001
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39856106 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 39856012  T
Q  460 attaagtgtga 470  Q
    |||||||||||    
T  39856011 attaagtgtga 39856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 397 - 551
Target Start/End: Original strand, 17852906 - 17853067
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 488  Q
    |||| |||||| ||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||        |||||||    
T  17852906 ggaggggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatca 17853005  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    ||||  ||| ||| ||||||||||| | |||||||||   |||||||||||||||||||||||    
T  17853006 tgttgttattttatctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 391 - 552
Target Start/End: Complemental strand, 34228534 - 34228364
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacgga-ctatataacatgtttttctaaaataaattaagtgtgattgaggtgttat------- 482  Q
    |||| ||||| ||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||           
T  34228534 gagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattg 34228435  T
Q  483 -ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 552  Q
     ||||||| |||||||||||||||||| | |||   |||||||| |||||||||  |||||| ||||||||    
T  34228434 cttatcatattaatatgttaacttttttataaaacattcatagtgtccgtaattacaaaatgtaaagtaaa 34228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 419 - 546
Target Start/End: Complemental strand, 40572421 - 40572287
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 510  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||| |||||| | || ||||        ||||||||||||||||||||||||| ||    
T  40572421 ttttaaaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaactttt-aa 40572323  T
Q  511 aaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    ||||||||| |||| |||||||||||||||||||||    
T  40572322 aaaatattttatagcatccgtaatttaaaaatgaaa 40572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 482 - 593
Target Start/End: Original strand, 10315761 - 10315872
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    |||||| |||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||| ||||    ||  |||||||||||||||||| ||    
T  10315761 tttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctcccttcccctcctaaacctt 10315860  T
Q  582 ccatccaaacac 593  Q
    ||||||||||||    
T  10315861 ccatccaaacac 10315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 397 - 525
Target Start/End: Complemental strand, 37417842 - 37417706
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatca 488  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||| || |||        |||||||    
T  37417842 ggaggggatggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatca 37417743  T
Q  489 tgttaatatgttaactttttaaaaaatatttcatagt 525  Q
    ||| ||||||||||||||||| |||| ||||||||||    
T  37417742 tgtgaatatgttaactttttagaaaacatttcatagt 37417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 32872897 - 32872826
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||||||||||    
T  32872897 tttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaagaaaagtaaac 32872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 596
Target Start/End: Complemental strand, 13425236 - 13425122
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 581  Q
    ||||||||||||||||||| |||||| |||||||||||  |||| || ||||||||||||| |||| |||||  |||  | ||||||||||||||||  |    
T  13425236 tttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccct 13425137  T
Q  582 ccatccaaacacacc 596  Q
    | |||||||||||||    
T  13425136 ctatccaaacacacc 13425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 443 - 541
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  443 atgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaat 534  Q
    |||||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  535 ttaaaaa 541  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 443 - 541
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  443 atgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaat 534  Q
    |||||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  535 ttaaaaa 541  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 595
Target Start/End: Original strand, 26365769 - 26366009
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||||  |||||| ||||||    || |||||  ||| ||||| ||||| |||||| |||||  |||||||||||| |||||||||||||    
T  26365769 agtgtgtttggattgagggtttaggagggg----gaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaata 26365864  T
Q  459 aattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 550  Q
    || || |||||||||| || |||        ||| |||||||| ||| |||| |||  |||||||||||  |||||||| ||||||||||| |||||  |    
T  26365865 aactaggtgtgattgaagtattatatgattgtttctcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaatca 26365964  T
Q  551 aacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    |||  |||| || |||||| || |||||  ||| |||||||||||    
T  26365965 aactatcccctctcttcccatcttaaaccctccgtccaaacacac 26366009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 360 - 474
Target Start/End: Complemental strand, 31571711 - 31571600
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatg-tttttctaaaata 458  Q
    ||||||||||||||  |||||| ||||||||| ||||||||||     |||| ||||| |||||||||||||||| |||||||||| ||||| ||||| |    
T  31571711 gtgtgtttggattgagggtttaggaggggaagcgaggggagag-----tttacttttcttttttaaattacggaccatataacatgctttttttaaaaaa 31571617  T
Q  459 a-attaagtgtgattga 474  Q
    | |||||||||||||||    
T  31571616 atattaagtgtgattga 31571600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 596
Target Start/End: Complemental strand, 48881646 - 48881560
Alignment:
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| ||||| ||| | ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  48881646 aaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacacc 48881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 23029537 - 23029480
Alignment:
Q  403 gagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaa 460  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaa 23029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 39856038 - 39856107
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  39856038 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 39856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 516 - 596
Target Start/End: Complemental strand, 36267635 - 36267555
Alignment:
Q  516 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||| ||| ||||||||||||||||| ||||| ||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  36267635 attttataatatccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 36267555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 547
Target Start/End: Original strand, 42087041 - 42087188
Alignment:
Q  408 tttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgt 499  Q
    |||||||||| |||| |||||||| | |||||||||| || || ||||||||||||||||| |||||  | |||        ||| ||| |||||||||     
T  42087041 tttatttttctttttaaaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgc 42087140  T
Q  500 taactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 547  Q
    |||||||||||||||  ||  ||| || ||||||||||||||||||||    
T  42087141 taactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaa 42087188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 31571643 - 31571712
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  31571643 tccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacacc 31571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 10315648 - 10315712
Alignment:
Q  397 ggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaat 461  Q
    |||| ||||| |||| ||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  10315648 ggaggggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaataaat 10315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 551
Target Start/End: Original strand, 19835838 - 19835906
Alignment:
Q  483 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||| |||||| ||| |||| |||||||| || |||| ||||| |||||||||||||||||||||||||    
T  19835838 ttatgatgttattattttaattttttaaagaacattttatagtttccgtaatttaaaaatgaaaagtaa 19835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 601
Target Start/End: Complemental strand, 31553287 - 31553182
Alignment:
Q  493 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    |||||||||||||||||||||| |||||||| | ||||| |||| ||||| ||||||  ||  || | ||||||||||||||||||  ||||||||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttattt-aaaattaaaagt-gaccctctcctcccttcccctcctaaac-ctccatccaaaca 31553191  T
Q  593 caccataaa 601  Q
    |||| ||||    
T  31553190 caccctaaa 31553182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 596
Target Start/End: Original strand, 33519105 - 33519290
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgttaatatgttaactttttaa 510  Q
    ||||||||||||| || |||||| |||||||| | |||||||||||||||  |||| || ||||        ||||||||||  ||  | || ||| |||    
T  33519105 tttttaaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaa 33519204  T
Q  511 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||  |||| ||| | || |||||||||| | ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  33519205 aaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacacc 33519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 542
Target Start/End: Complemental strand, 47229948 - 47229888
Alignment:
Q  482 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaat 542  Q
    |||||||||||||||||||  |||||||| |||||||||||| || ||||| |||||||||    
T  47229948 tttatcatgttaatatgttcgctttttaagaaatatttcataatacccgtagtttaaaaat 47229888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 474
Target Start/End: Original strand, 48152036 - 48152092
Alignment:
Q  414 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    |||| ||||||||||||||    |||||||||||||||||||||||||| |||||||||||    
T  48152036 tttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattga 48152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 13771119 - 13771188
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  || | ||||||||||||||||||  || ||| |||||||||    
T  13771119 tccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacacc 13771188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Complemental strand, 28074174 - 28074105
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| ||||||| |    |||| |||||||||||||||||| ||| |||||||||||||    
T  28074174 tccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacc 28074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 596
Target Start/End: Complemental strand, 30592372 - 30592255
Alignment:
Q  479 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 578  Q
    ||||||||||| | | ||| | || ||||||||||  |||| ||||| || |||||||||||| ||||||||| |  |||| |||||| ||||||||||     
T  30592372 ttatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaat 30592273  T
Q  579 tttccatccaaacacacc 596  Q
      |||||||||| |||||    
T  30592272 cctccatccaaatacacc 30592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 34228492 - 34228561
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||| |||||||||||||||   |||| ||||||| |||||||||| ||| || ||||||||||    
T  34228492 tccgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacacc 34228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 38378096 - 38378165
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat 482  Q
    ||||| |||||||| |||| ||||||||||||||||||  ||||||||| || ||| |||||||| ||||    
T  38378096 ttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattat 38378165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 40196566 - 40196619
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttt 449  Q
    |||||||||||||||| ||||||||||| ||||||||||  ||||| |||||||    
T  40196566 gggagaggagggtttacttttcatttttgaattacggacactataaaatgtttt 40196619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 551
Target Start/End: Complemental strand, 2087833 - 2087786
Alignment:
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
    |||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  2087833 tttttaaaaattattttataatatccgtaatttaaaaaagaaaagtaa 2087786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Complemental strand, 30891078 - 30891039
Alignment:
Q  514 atatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  30891078 atattttatagtgtccgtaatttaaaaatgaaaagtaaac 30891039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 37925910 - 37925843
Alignment:
Q  529 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||||    
T  37925910 cgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 37925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 47390922 - 47390852
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    ||||||||||| |||||||||||  |||  |||||||||||||||| |  || ||||||||||||| ||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaaa 47390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 48013558 - 48013608
Alignment:
Q  418 atttttaaattacggactatataacatgtttttctaaaataaattaagtgt 468  Q
    |||||||||||||| || || ||| |||||||| |||||||||||||||||    
T  48013558 atttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgt 48013608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 474
Target Start/End: Complemental strand, 18795788 - 18795727
Alignment:
Q  413 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 474  Q
    ||||| ||||||||||||| || |||||| |||||||| ||||| |||| |||||| |||||    
T  18795788 ttttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattga 18795727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 28074106 - 28074147
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggaga 401  Q
    |||||||||||||| ||||||| ||||||||| |||||||||    
T  28074106 gtgtgtttggattgaaggtttaggaggggaagggaggggaga 28074147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 33655148 - 33655180
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||| ||||||||||||||||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggac 33655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 595
Target Start/End: Original strand, 33655285 - 33655349
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||| |||||||||||  || | || |||||||||||||||  || ||||||||||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 554
Target Start/End: Original strand, 34235180 - 34235208
Alignment:
Q  526 atccgtaatttaaaaatgaaaagtaaaca 554  Q
    |||||||||||||||||||||||||||||    
T  34235180 atccgtaatttaaaaatgaaaagtaaaca 34235208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 468
Target Start/End: Original strand, 37925844 - 37925947
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataa 459  Q
    ||||||||||||||  |||||| ||||||||| ||||||||     |||| | ||||  ||||||||||||| || || ||| |||||||| | |||||     
T  37925844 gtgtgtttggattgagggtttaggaggggaagggaggggag-----ggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatag 37925938  T
Q  460 attaagtgt 468  Q
    |||||||||    
T  37925939 attaagtgt 37925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 45843123 - 45843043
Alignment:
Q  63 caattttagaggtg-ccatggaaggaagcttgaaagtttggtaacggtgactaacaaagtaaacacgaggggaggtaaatg 142  Q
    |||||||| ||||| ||||||||||| | | ||| ||||||||||||| || |||| |||||||| ||| |||||| ||||    
T  45843123 caattttaaaggtggccatggaaggatgttggaatgtttggtaacggtcacaaacatagtaaacatgagtggaggtgaatg 45843043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 396 - 602
Target Start/End: Complemental strand, 39400 - 39182
Alignment:
Q  396 gggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgagg----------tgtt-attt 484  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |          || | ||||    
T  39400 gggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagtgtgattgaagaagtattatatgatcattt 39301  T
Q  485 atcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaactttcc 583  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||  ||  ||||||||||||||  |||    
T  39300 atcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctcc 39201  T
Q  584 atccaaacacaccataaaa 602  Q
    ||||||||||||| |||||    
T  39200 atccaaacacaccctaaaa 39182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 596
Target Start/End: Original strand, 39363 - 39432
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    ||||||||||||||| |||||||||||  |||| |||||| |||| ||||||  || |||||||||||||    
T  39363 tccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacc 39432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 39189 - 39259
Alignment:
Q  360 gtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggac 434  Q
    |||||||||||| |  |||||| ||||||||  ||||||    ||||||||| ||||||||||||||||||||||    
T  39189 gtgtgtttggatggagggtttaggaggggaaatgagggg----gagggtttacttttcatttttaaattacggac 39259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 402 - 592
Target Start/End: Complemental strand, 16500 - 16302
Alignment:
Q  402 ggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat--------ttatcatgtta 493  Q
    |||||||||| ||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| || ||||        |||||||||||    
T  16500 ggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 16401  T
Q  494 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 592  Q
    |||||||||| ||||| |||| |||||||||| | | |||||||||||||||||||||||  |||| ||| || |||||||||||  ||||||||||||    
T  16400 atatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaaca 16302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 407 - 577
Target Start/End: Original strand, 15995 - 16173
Alignment:
Q  407 gtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttattta--------tcatgttaatatg 498  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| || || | ||        |||| ||||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  499 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 577  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||  |  | |||||||||||||||||    
T  16095 ttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaa 16173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 551
Target Start/End: Original strand, 6613 - 6780
Alignment:
Q  391 gagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgttat-ttatc-- 487  Q
    |||| ||||| |||||||||| ||||| |||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||| || |||| | |||      
T  6613 gagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagtgtgattgaagtattatatgatcgt 6712  T
Q  488 ----atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 551  Q
        |||||||||| |||| ||||| |||||||||||||||| | ||||||||||||| |||||||||    
T  6713 ttatatgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 6652 - 6581
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 601  Q
    |||||||||||| |||||||||||  |||| ||||||| |||||||||  ||| ||||||||||||| ||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaaa 6581  T

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Target: scaffold0341 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 553
Target Start/End: Original strand, 18807 - 18968
Alignment:
Q  398 gagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta-------tttatcatg 490  Q
    |||||||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||||||| |||| |||||  | |||       |||||||||    
T  18807 gagaggagggtttatttt-cttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatctttatcatg 18905  T
Q  491 ttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 553  Q
    ||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  18906 ttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 18968  T

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Target: scaffold0294 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 599
Target Start/End: Original strand, 15320 - 15507
Alignment:
Q  419 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaggtgtta--------tttatcatgttaatatgttaactttttaa 510  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||| |||| || |||        ||||||| ||||||||||| || ||||||    
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaa 15419  T
Q  511 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccata 599  Q
    |||| | |||||||| |||||||||||||||| ||||||| |   ||   ||||||||| ||||||||  |||||||||||||||||||    
T  15420 aaaaca-ttcatagtgtccgtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccctccatccaaacacaccata 15507  T

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Target: scaffold0026 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 359 - 559
Target Start/End: Original strand, 1174 - 1377
Alignment:
Q  359 agtgtgtttggattggaggtttatgaggggaagagaggggagaggagggtttatttttcatttttaaattacggactatataacatgtttttctaaaata 458  Q
    |||||||||||||||  |||||| ||||||||||||||||||||     |||| ||||| ||||||||||||||||||| ||||||||| |||||    |    
T  1174 agtgtgtttggattgagggtttaggaggggaagagaggggagag-----tttacttttcttttttaaattacggactatgtaacatgttattcta----a 1264  T
Q  459 aattaagtgtgattgaggtgtta------------tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 546  Q
    |||||||| ||| ||| || |||            |||||||||  |||||||||||||||||||||| |||||||||| | | ||||||||||||||||    
T  1265 aattaagtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaa 1364  T
Q  547 agtaaacattccc 559  Q
    ||||||| |||||    
T  1365 agtaaaccttccc 1377  T

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Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 595
Target Start/End: Complemental strand, 1243 - 1175
Alignment:
Q  527 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || ||||||||||||    
T  1243 tccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0198 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 510 - 595
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  510 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 595  Q
    ||||| |||||||||| || |||||||||||| |||||||||||  |||| ||||||||||||||||||| || ||||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 594
Target Start/End: Original strand, 242366 - 242456
Alignment:
Q  504 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||  |||| ||| | ||||||||||||||| |||||||||||  |||| |||||||||||  |||||  ||||||||||||||    
T  242366 tttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 596
Target Start/End: Original strand, 17716 - 17780
Alignment:
Q  530 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 596  Q
    |||||||||||| |||||||||||   ||| |||||||| |||||||||  ||||||||||||||||    
T  17716 gtaatttaaaaaagaaaagtaaacc--cccctcccttccactcctaaaccctccatccaaacacacc 17780  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 594
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  531 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 594  Q
    ||||||||||| ||| |||||||  |||| |||||| |||||||||||  ||||||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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