View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11980_low_42 (Length: 410)

Name: NF11980_low_42
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11980_low_42
NF11980_low_42
[»] chr3 (71 HSPs)
chr3 (190-406)||(2737420-2737636)
chr3 (23-170)||(27978992-27979139)
chr3 (23-171)||(51922059-51922210)
chr3 (23-170)||(17935481-17935628)
chr3 (23-170)||(18351438-18351585)
chr3 (23-173)||(27338856-27339009)
chr3 (23-170)||(43468073-43468220)
chr3 (29-170)||(17360489-17360633)
chr3 (29-170)||(17365131-17365275)
chr3 (23-171)||(41016800-41016951)
chr3 (23-170)||(2214919-2215067)
chr3 (23-170)||(3712002-3712152)
chr3 (23-170)||(50826763-50826913)
chr3 (23-170)||(50848940-50849090)
chr3 (23-172)||(13507237-13507390)
chr3 (23-170)||(4456624-4456775)
chr3 (23-170)||(8204028-8204178)
chr3 (23-170)||(13847669-13847817)
chr3 (23-171)||(8153127-8153278)
chr3 (23-171)||(22966076-22966227)
chr3 (23-170)||(15694825-15694975)
chr3 (23-170)||(15711428-15711578)
chr3 (23-170)||(22952102-22952252)
chr3 (23-170)||(30062629-30062778)
chr3 (29-170)||(14520712-14520856)
chr3 (23-170)||(4435833-4435984)
chr3 (23-161)||(5144274-5144414)
chr3 (23-170)||(10713426-10713576)
chr3 (23-170)||(10720700-10720850)
chr3 (23-170)||(14426038-14426188)
chr3 (23-162)||(18881936-18882078)
chr3 (23-170)||(18949441-18949591)
chr3 (23-170)||(25265005-25265155)
chr3 (23-170)||(25274499-25274649)
chr3 (23-161)||(6293524-6293665)
chr3 (23-170)||(6564009-6564158)
chr3 (23-170)||(6577678-6577827)
chr3 (23-170)||(27550643-27550794)
chr3 (41-172)||(17562685-17562819)
chr3 (23-170)||(17630514-17630664)
chr3 (41-171)||(1004108-1004241)
chr3 (23-170)||(29730411-29730563)
chr3 (41-170)||(11918197-11918329)
chr3 (41-170)||(11932767-11932899)
chr3 (29-170)||(13555610-13555750)
chr3 (41-162)||(16291118-16291242)
chr3 (41-162)||(31278904-31279028)
chr3 (23-170)||(8196217-8196367)
chr3 (41-161)||(1480306-1480429)
chr3 (41-161)||(4503364-4503487)
chr3 (41-161)||(13275127-13275250)
chr3 (23-170)||(39707252-39707403)
chr3 (23-162)||(15675078-15675220)
chr3 (23-162)||(27957185-27957322)
chr3 (23-170)||(2256832-2256984)
chr3 (41-170)||(24215984-24216116)
chr3 (41-161)||(7063629-7063752)
chr3 (41-161)||(7096476-7096599)
chr3 (23-162)||(15683620-15683762)
chr3 (41-161)||(12469084-12469207)
chr3 (41-161)||(17616482-17616605)
chr3 (65-171)||(18900358-18900464)
chr3 (23-157)||(21185428-21185564)
chr3 (41-170)||(27880603-27880733)
chr3 (81-170)||(22094837-22094926)
chr3 (23-118)||(15697138-15697236)
chr3 (41-159)||(9567282-9567403)
chr3 (41-143)||(27884998-27885101)
chr3 (23-85)||(18041311-18041373)
chr3 (111-171)||(18041374-18041434)
chr3 (128-170)||(15697231-15697273)
[»] chr7 (49 HSPs)
chr7 (190-406)||(44546686-44546902)
chr7 (29-170)||(13491880-13492021)
chr7 (23-170)||(16545666-16545813)
chr7 (23-170)||(16619849-16619996)
chr7 (23-161)||(17211500-17211638)
chr7 (29-170)||(13478068-13478208)
chr7 (23-170)||(1886732-1886882)
chr7 (23-170)||(1900833-1900983)
chr7 (23-170)||(24185927-24186077)
chr7 (29-170)||(10449552-10449693)
chr7 (23-170)||(17739183-17739331)
chr7 (23-161)||(16909646-16909784)
chr7 (23-170)||(13832963-13833113)
chr7 (23-170)||(17514148-17514298)
chr7 (23-170)||(17538916-17539066)
chr7 (23-170)||(18302861-18303011)
chr7 (23-170)||(4940091-4940242)
chr7 (23-171)||(27965756-27965907)
chr7 (23-170)||(13840993-13841143)
chr7 (23-173)||(16889546-16889700)
chr7 (23-170)||(27975210-27975360)
chr7 (23-171)||(5198979-5199129)
chr7 (23-170)||(5208097-5208246)
chr7 (23-170)||(15185752-15185903)
chr7 (23-170)||(15200372-15200523)
chr7 (23-161)||(29096942-29097082)
chr7 (41-170)||(558254-558386)
chr7 (41-170)||(568164-568296)
chr7 (23-161)||(29082183-29082323)
chr7 (41-161)||(38255654-38255777)
chr7 (41-161)||(38263229-38263352)
chr7 (23-170)||(44075014-44075164)
chr7 (23-172)||(4661687-4661834)
chr7 (41-161)||(40680194-40680317)
chr7 (41-161)||(48498520-48498643)
chr7 (41-170)||(36476574-36476705)
chr7 (41-170)||(2549177-2549310)
chr7 (41-170)||(2563063-2563196)
chr7 (41-170)||(16120492-16120626)
chr7 (41-170)||(16147232-16147366)
chr7 (41-161)||(29023647-29023770)
chr7 (23-172)||(19383908-19384060)
chr7 (41-161)||(16227984-16228108)
chr7 (41-161)||(16244862-16244986)
chr7 (41-161)||(27435481-27435605)
chr7 (41-161)||(27444511-27444635)
chr7 (41-160)||(43600819-43600939)
chr7 (23-162)||(43139106-43139246)
chr7 (41-86)||(29032085-29032133)
[»] scaffold0222 (1 HSPs)
scaffold0222 (25-170)||(9802-9947)
[»] chr6 (51 HSPs)
chr6 (29-170)||(8719657-8719798)
chr6 (29-170)||(24920694-24920835)
chr6 (23-170)||(16302770-16302917)
chr6 (23-170)||(21708370-21708517)
chr6 (23-170)||(5486923-5487073)
chr6 (23-170)||(27537626-27537776)
chr6 (23-170)||(27551835-27551985)
chr6 (23-169)||(35090139-35090288)
chr6 (23-170)||(15389214-15389365)
chr6 (23-170)||(16635625-16635775)
chr6 (23-170)||(16645582-16645732)
chr6 (23-170)||(30822981-30823131)
chr6 (23-170)||(12451321-12451468)
chr6 (23-171)||(18204938-18205088)
chr6 (23-170)||(18219938-18220087)
chr6 (23-170)||(5996869-5997019)
chr6 (23-170)||(13492244-13492392)
chr6 (23-170)||(28267593-28267743)
chr6 (23-170)||(28346342-28346492)
chr6 (23-170)||(30995327-30995477)
chr6 (23-169)||(25713962-25714111)
chr6 (23-170)||(18112140-18112289)
chr6 (23-170)||(18126685-18126834)
chr6 (29-170)||(33300341-33300485)
chr6 (23-170)||(13828005-13828156)
chr6 (23-170)||(14475800-14475951)
chr6 (23-170)||(16589227-16589377)
chr6 (23-170)||(16606003-16606153)
chr6 (23-170)||(27960488-27960637)
chr6 (29-171)||(11063894-11064035)
chr6 (23-172)||(20530496-20530649)
chr6 (23-163)||(25552627-25552770)
chr6 (23-170)||(28304441-28304591)
chr6 (23-161)||(24485252-24485393)
chr6 (23-170)||(23927801-23927952)
chr6 (23-171)||(25993794-25993944)
chr6 (23-170)||(5008154-5008304)
chr6 (23-170)||(25699808-25699958)
chr6 (23-170)||(19826377-19826531)
chr6 (41-161)||(16097775-16097898)
chr6 (41-161)||(18587362-18587485)
chr6 (41-161)||(25654216-25654339)
chr6 (23-171)||(27047046-27047199)
chr6 (41-161)||(23982514-23982638)
chr6 (23-170)||(27057291-27057443)
chr6 (41-161)||(21358422-21358546)
chr6 (41-161)||(23962404-23962528)
chr6 (69-162)||(335295-335388)
chr6 (98-170)||(15141656-15141728)
chr6 (23-87)||(25693167-25693234)
chr6 (100-162)||(18842945-18843007)
[»] scaffold0389 (1 HSPs)
scaffold0389 (23-162)||(9819-9958)
[»] scaffold0015 (3 HSPs)
scaffold0015 (23-170)||(194971-195118)
scaffold0015 (23-170)||(188781-188931)
scaffold0015 (23-170)||(159312-159462)
[»] chr4 (30 HSPs)
chr4 (23-170)||(18010295-18010442)
chr4 (23-170)||(55584160-55584307)
chr4 (23-172)||(10640600-10640752)
chr4 (23-170)||(4522214-4522364)
chr4 (23-171)||(25652448-25652596)
chr4 (23-172)||(8092734-8092886)
chr4 (23-172)||(52297944-52298096)
chr4 (23-170)||(773403-773553)
chr4 (23-170)||(8101541-8101691)
chr4 (23-170)||(12425216-12425366)
chr4 (23-170)||(27341512-27341662)
chr4 (29-171)||(26033960-26034105)
chr4 (23-170)||(20865659-20865809)
chr4 (23-170)||(1875344-1875494)
chr4 (23-170)||(1889459-1889609)
chr4 (23-170)||(12998785-12998935)
chr4 (23-170)||(21530105-21530255)
chr4 (23-161)||(26210390-26210530)
chr4 (23-161)||(26219150-26219290)
chr4 (29-170)||(4747401-4747545)
chr4 (41-161)||(19644871-19644994)
chr4 (41-177)||(21810858-21810997)
chr4 (44-162)||(21398827-21398948)
chr4 (41-161)||(19760059-19760183)
chr4 (41-161)||(19774815-19774939)
chr4 (41-161)||(14736790-14736913)
chr4 (41-170)||(10786892-10787024)
chr4 (41-161)||(14718505-14718628)
chr4 (41-161)||(34842931-34843054)
chr4 (41-161)||(25247163-25247286)
[»] scaffold0023 (2 HSPs)
scaffold0023 (23-170)||(136321-136468)
scaffold0023 (23-162)||(145291-145430)
[»] chr1 (42 HSPs)
chr1 (23-162)||(2385424-2385563)
chr1 (23-170)||(13452287-13452437)
chr1 (23-170)||(13461182-13461332)
chr1 (23-170)||(3431401-3431551)
chr1 (23-170)||(31541413-31541563)
chr1 (23-170)||(31549982-31550132)
chr1 (23-170)||(20502369-20502516)
chr1 (23-170)||(23355413-23355560)
chr1 (23-172)||(43456299-43456451)
chr1 (23-170)||(41744502-41744652)
chr1 (23-173)||(35097375-35097528)
chr1 (23-170)||(23952372-23952522)
chr1 (23-170)||(28991106-28991256)
chr1 (29-170)||(32135108-32135253)
chr1 (23-162)||(21496890-21497031)
chr1 (29-162)||(22479889-22480025)
chr1 (23-171)||(21244870-21245021)
chr1 (23-170)||(46776801-46776951)
chr1 (23-170)||(13803853-13804005)
chr1 (23-170)||(21055133-21055280)
chr1 (23-171)||(38123426-38123576)
chr1 (29-170)||(13477298-13477442)
chr1 (41-162)||(22495867-22495991)
chr1 (29-161)||(32608850-32608986)
chr1 (41-161)||(3350534-3350657)
chr1 (29-170)||(25337154-25337294)
chr1 (41-161)||(8513971-8514094)
chr1 (41-161)||(12464053-12464176)
chr1 (41-161)||(22472829-22472952)
chr1 (41-161)||(34336620-34336743)
chr1 (46-160)||(18780115-18780232)
chr1 (23-170)||(28460033-28460189)
chr1 (41-161)||(27311794-27311917)
chr1 (29-172)||(51055113-51055256)
chr1 (41-161)||(16135391-16135514)
chr1 (41-170)||(31553630-31553763)
chr1 (41-170)||(31562764-31562897)
chr1 (41-162)||(36848507-36848631)
chr1 (23-170)||(52101396-52101542)
chr1 (29-169)||(8240865-8241007)
chr1 (41-157)||(2248413-2248532)
chr1 (41-157)||(4282520-4282638)
[»] chr8 (38 HSPs)
chr8 (23-172)||(4837360-4837512)
chr8 (23-172)||(4842805-4842957)
chr8 (23-170)||(26871212-26871362)
chr8 (23-170)||(25719271-25719418)
chr8 (23-171)||(36248962-36249113)
chr8 (23-170)||(17529285-17529435)
chr8 (23-170)||(22103424-22103574)
chr8 (23-170)||(25584851-25585001)
chr8 (23-170)||(30939742-30939892)
chr8 (23-163)||(36252303-36252443)
chr8 (23-170)||(17975892-17976043)
chr8 (29-162)||(23922863-23922996)
chr8 (23-170)||(15832165-15832315)
chr8 (23-170)||(36576543-36576693)
chr8 (23-170)||(17662267-17662418)
chr8 (23-170)||(25796786-25796937)
chr8 (23-170)||(16761054-16761204)
chr8 (23-170)||(16775491-16775641)
chr8 (29-171)||(14335742-14335883)
chr8 (23-170)||(17681396-17681547)
chr8 (23-170)||(1388092-1388242)
chr8 (23-170)||(39836010-39836160)
chr8 (23-170)||(39844052-39844202)
chr8 (41-162)||(6582682-6582806)
chr8 (41-170)||(14204769-14204901)
chr8 (41-170)||(14219410-14219542)
chr8 (41-162)||(19851053-19851177)
chr8 (41-162)||(19857089-19857213)
chr8 (29-171)||(23600858-23601000)
chr8 (41-162)||(17129553-17129677)
chr8 (23-162)||(26912534-26912675)
chr8 (41-170)||(31000605-31000737)
chr8 (41-161)||(16190398-16190521)
chr8 (41-161)||(22418386-22418509)
chr8 (41-161)||(31207505-31207628)
chr8 (23-170)||(4583820-4583972)
chr8 (41-162)||(22366732-22366857)
chr8 (41-161)||(23092980-23093102)
[»] chr2 (59 HSPs)
chr2 (29-171)||(28481459-28481601)
chr2 (29-170)||(19655563-19655704)
chr2 (23-170)||(15942988-15943138)
chr2 (23-170)||(15951498-15951648)
chr2 (23-170)||(26731633-26731783)
chr2 (23-170)||(35140081-35140231)
chr2 (23-170)||(35148422-35148572)
chr2 (23-170)||(38153999-38154149)
chr2 (23-170)||(21151542-21151689)
chr2 (40-171)||(38611414-38611545)
chr2 (29-170)||(6855957-6856101)
chr2 (29-171)||(34068673-34068815)
chr2 (23-170)||(20364529-20364679)
chr2 (23-170)||(25493324-25493474)
chr2 (23-170)||(20920942-20921089)
chr2 (23-171)||(25496057-25496208)
chr2 (23-171)||(29855450-29855601)
chr2 (23-170)||(17684935-17685085)
chr2 (23-170)||(24293652-24293802)
chr2 (23-170)||(34527846-34527996)
chr2 (23-170)||(34541820-34541970)
chr2 (23-170)||(41232315-41232465)
chr2 (23-170)||(35304808-35304954)
chr2 (23-170)||(26717500-26717650)
chr2 (29-171)||(35040168-35040314)
chr2 (29-170)||(14630522-14630662)
chr2 (23-172)||(34437197-34437349)
chr2 (23-170)||(44375262-44375413)
chr2 (23-170)||(44390843-44390994)
chr2 (23-170)||(2653139-2653289)
chr2 (23-170)||(3754885-3755035)
chr2 (23-170)||(26896528-26896678)
chr2 (29-170)||(30683105-30683248)
chr2 (23-170)||(42564376-42564526)
chr2 (23-170)||(42573000-42573150)
chr2 (29-170)||(21320618-21320760)
chr2 (23-161)||(30524527-30524668)
chr2 (23-161)||(33306564-33306705)
chr2 (41-162)||(11622049-11622173)
chr2 (41-170)||(42386245-42386377)
chr2 (41-170)||(42401129-42401261)
chr2 (23-162)||(42247482-42247625)
chr2 (23-170)||(3764936-3765086)
chr2 (23-170)||(15600841-15600991)
chr2 (41-170)||(10681324-10681456)
chr2 (23-168)||(24287084-24287231)
chr2 (41-161)||(16274900-16275023)
chr2 (41-161)||(16284076-16284199)
chr2 (41-161)||(27680932-27681055)
chr2 (23-162)||(21111468-21111605)
chr2 (41-171)||(21850121-21850254)
chr2 (41-162)||(31354719-31354844)
chr2 (41-170)||(21858557-21858689)
chr2 (41-161)||(22187461-22187585)
chr2 (41-170)||(34708248-34708380)
chr2 (41-161)||(42245675-42245798)
chr2 (41-170)||(34685826-34685959)
chr2 (23-103)||(39842078-39842158)
chr2 (97-159)||(23283970-23284032)
[»] scaffold0044 (2 HSPs)
scaffold0044 (23-170)||(63938-64086)
scaffold0044 (23-170)||(80338-80488)
[»] chr5 (49 HSPs)
chr5 (23-170)||(31423975-31424125)
chr5 (29-170)||(29190338-29190478)
chr5 (23-170)||(43596506-43596656)
chr5 (23-170)||(43629300-43629450)
chr5 (31-170)||(19226088-19226226)
chr5 (23-172)||(24955292-24955444)
chr5 (23-170)||(21931616-21931765)
chr5 (23-170)||(24963754-24963904)
chr5 (23-170)||(26088336-26088486)
chr5 (23-170)||(31413069-31413219)
chr5 (23-170)||(20396266-20396417)
chr5 (23-171)||(23348541-23348692)
chr5 (23-170)||(1726619-1726769)
chr5 (23-170)||(26078357-26078507)
chr5 (23-170)||(11802347-11802497)
chr5 (23-170)||(11812423-11812573)
chr5 (23-170)||(12170129-12170279)
chr5 (23-170)||(12179558-12179708)
chr5 (31-162)||(41093556-41093692)
chr5 (23-172)||(28854012-28854164)
chr5 (23-170)||(3476764-3476915)
chr5 (23-170)||(3491534-3491685)
chr5 (23-170)||(28845402-28845552)
chr5 (23-170)||(36458831-36458981)
chr5 (23-161)||(33843838-33843979)
chr5 (29-170)||(344880-345020)
chr5 (29-170)||(359519-359659)
chr5 (34-170)||(20370578-20370718)
chr5 (41-162)||(21856805-21856929)
chr5 (23-170)||(33835130-33835280)
chr5 (41-162)||(17642691-17642815)
chr5 (41-170)||(27220141-27220273)
chr5 (41-170)||(27223148-27223280)
chr5 (41-170)||(27232619-27232751)
chr5 (41-161)||(23827754-23827878)
chr5 (41-161)||(21986174-21986298)
chr5 (41-162)||(23039321-23039445)
chr5 (41-161)||(23637554-23637678)
chr5 (41-161)||(23835212-23835336)
chr5 (41-170)||(27064296-27064428)
chr5 (41-161)||(21994822-21994946)
chr5 (23-170)||(20377962-20378111)
chr5 (23-170)||(20386751-20386900)
chr5 (41-156)||(21850650-21850768)
chr5 (41-156)||(21858564-21858682)
chr5 (41-161)||(31548052-31548176)
chr5 (48-161)||(26177302-26177419)
chr5 (71-161)||(23985003-23985093)
chr5 (41-161)||(23762288-23762412)
[»] scaffold0077 (2 HSPs)
scaffold0077 (23-170)||(29775-29922)
scaffold0077 (40-170)||(32642-32772)
[»] scaffold0392 (1 HSPs)
scaffold0392 (23-170)||(16395-16545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-169)||(109606-109754)
[»] scaffold0431 (1 HSPs)
scaffold0431 (23-170)||(4609-4759)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-170)||(172581-172731)
[»] scaffold0462 (1 HSPs)
scaffold0462 (29-170)||(13635-13779)
[»] scaffold0156 (1 HSPs)
scaffold0156 (23-170)||(29569-29719)
[»] scaffold0257 (1 HSPs)
scaffold0257 (23-172)||(10395-10547)
[»] scaffold0192 (1 HSPs)
scaffold0192 (23-170)||(21929-22080)
[»] scaffold0155 (1 HSPs)
scaffold0155 (23-162)||(21459-21601)
[»] scaffold0043 (1 HSPs)
scaffold0043 (23-162)||(63441-63581)
[»] scaffold0001 (1 HSPs)
scaffold0001 (23-163)||(46459-46599)
[»] scaffold0357 (1 HSPs)
scaffold0357 (23-172)||(4480-4630)
[»] scaffold0056 (2 HSPs)
scaffold0056 (29-170)||(30144-30286)
scaffold0056 (67-170)||(11481-11584)
[»] scaffold1804 (1 HSPs)
scaffold1804 (23-171)||(208-360)
[»] scaffold0233 (1 HSPs)
scaffold0233 (23-161)||(15382-15524)
[»] scaffold0429 (1 HSPs)
scaffold0429 (23-161)||(15086-15227)
[»] scaffold0278 (1 HSPs)
scaffold0278 (23-170)||(10635-10782)
[»] scaffold1199 (1 HSPs)
scaffold1199 (23-161)||(2219-2359)
[»] scaffold0451 (1 HSPs)
scaffold0451 (23-170)||(4749-4899)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-143)||(63372-63487)
[»] scaffold0046 (1 HSPs)
scaffold0046 (41-162)||(55786-55910)
[»] scaffold0047 (1 HSPs)
scaffold0047 (41-161)||(83660-83783)
[»] scaffold0455 (1 HSPs)
scaffold0455 (48-162)||(3579-3696)
[»] scaffold0945 (1 HSPs)
scaffold0945 (41-161)||(56-180)
[»] scaffold0605 (1 HSPs)
scaffold0605 (41-161)||(7744-7868)
[»] scaffold0280 (1 HSPs)
scaffold0280 (41-161)||(75-199)
[»] scaffold0671 (1 HSPs)
scaffold0671 (65-162)||(8432-8529)
[»] scaffold0273 (1 HSPs)
scaffold0273 (41-161)||(22717-22840)
[»] scaffold0144 (1 HSPs)
scaffold0144 (23-109)||(1-90)
[»] scaffold0031 (1 HSPs)
scaffold0031 (93-170)||(346-423)
[»] scaffold0561 (1 HSPs)
scaffold0561 (97-172)||(1-76)
[»] scaffold0386 (1 HSPs)
scaffold0386 (97-171)||(1-75)
[»] scaffold0599 (1 HSPs)
scaffold0599 (111-170)||(9948-10007)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 406
Target Start/End: Complemental strand, 2737636 - 2737420
Alignment:
Q  190 caacatatctacataagggtctcttaccaatcaatttgacaaactgaacacaccgaacaatatttgcaaacttcaaatttgtgagcttcaaattttctag 289  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2737636 caacatatctacataagggtctcttaccaatcaatttgacaatctgaacacaccgaacaatatttgcaaacttcaaatttgcgagcttcaaattttctag 2737537  T
Q  290 acaatgagtatgtctttggcattcagaattattattattaactttttaacaaccgattactcctaaagaatttaatttgttcttcgttgaattaaattta 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2737536 acaatgagtatgtctttggcattcagaattattattattaactttttaacaatcgattactcctaaagaatttaatttgttcttcgttgaattaaattta 2737437  T
Q  390 tacggtctctgcttctc 406  Q
    ||| || ||||||||||    
T  2737436 taccgtttctgcttctc 2737420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 27978992 - 27979139
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27978992 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 27979091  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  27979092 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 27979139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 51922210 - 51922059
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51922210 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 51922111  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  51922110 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacac 51922059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17935481 - 17935628
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  17935481 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacaaataaaaattgagagttcaaagatt 17935580  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  17935581 tacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17935628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 18351438 - 18351585
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  18351438 agcaccttcccttcgcgtaaccaacccccaaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcagagatt 18351537  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  18351538 gacaattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 18351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 27339009 - 27338856
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27339009 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcaataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 27338910  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacactt 173  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  27338909 attgacgagtcaaatcaattaatggtttgatatccgaaaatcacgagcacactt 27338856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 43468220 - 43468073
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43468220 agcacattcccttcgcgtaaccaacccctgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 43468121  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||| |||||||||||| |||||||| ||||||| || ||||||    
T  43468120 gacgattcgaatcaattaatggtttgatattcgaaaattacgagcaca 43468073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 17360489 - 17360633
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17360489 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgac 17360588  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  17360589 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17360633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 17365131 - 17365275
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17365131 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgac 17365230  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  17365231 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17365275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 41016800 - 41016951
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41016800 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 41016899  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41016900 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacac 41016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 2215067 - 2214919
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-ttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  2215067 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaaggatttttactcatttttttccattcccacgaataaaaatcgagagttcaaagat 2214968  T
Q  122 tgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2214967 tgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 2214919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 3712002 - 3712152
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3712002 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 3712101  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  3712102 attgacgattcaaatcaattaatggtttgatatccgaaaatctcgagcaca 3712152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 50826763 - 50826913
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50826763 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 50826862  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  50826863 attgacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 50826913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 50849090 - 50848940
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50849090 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 50848991  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  50848990 attgacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 50848940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 13507390 - 13507237
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13507390 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 13507291  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13507290 gattgaagattcaaatcaattaatggtttgatatccgaaaatcacaagcacact 13507237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 4456624 - 4456775
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  4456624 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttcactcattttttcccttcccacgaataaaaatcgagagttcaaa 4456723  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4456724 gattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4456775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 8204178 - 8204028
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8204178 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 8204079  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  8204078 attgacgattcaaatcaattaatggtttgatagccgaaaatcacgagcaca 8204028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 13847817 - 13847669
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| || |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13847817 agcacctttcctttgcataaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 13847718  T
Q  123 gacgattc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  13847717 gacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 13847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 8153278 - 8153127
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8153278 agcaccttccctttgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 8153179  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  8153178 attgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcacac 8153127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 22966076 - 22966227
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  22966076 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 22966175  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | |||||||    
T  22966176 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacac 22966227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15694825 - 15694975
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15694825 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 15694924  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  15694925 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 15694975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15711428 - 15711578
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15711428 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 15711527  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  15711528 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 15711578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 22952102 - 22952252
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  22952102 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 22952201  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  22952202 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 22952252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 30062778 - 30062629
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  30062778 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcc-ttcccacgaataaaaatcgagagttcaaag 30062680  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  30062679 attgacaattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30062629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 14520856 - 14520712
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  14520856 ttcccttcgcgtaaccaacccccgaatccaaagtctcgacaagggtttttactcattttttcccttcccacgaataaaaattaagagttcaaagattgac 14520757  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  14520756 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 14520712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 4435833 - 4435984
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||    
T  4435833 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttcactcattttttccctttccacgaataaaaatcaagagttcaaa 4435932  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4435933 gattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 5144414 - 5144274
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  5144414 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 5144315  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  5144314 ttgacgattcaaatcaattaatggtttgacatccgaaaatc 5144274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 10713576 - 10713426
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  10713576 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 10713477  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  10713476 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 10713426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 10720850 - 10720700
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  10720850 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 10720751  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  10720750 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 10720700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 14426038 - 14426188
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||| ||||||||||||   ||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  14426038 agcaccttcccttcgcgtaaccaacccccaaatccaaagtctcgataaggatttttactcatttttttccttccaacgaataaaaatcgagagttcaaag 14426137  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  14426138 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 14426188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 18882078 - 18881936
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  18882078 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 18881979  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  18881978 attgacgattcaaatcaattaatggtttggtatctgaaaatca 18881936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 18949591 - 18949441
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||  ||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18949591 agcaccttcccttcgcgtaaccaattcccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 18949492  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  18949491 attgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 18949441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25265005 - 25265155
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  25265005 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaattgagagttcaaag 25265104  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  25265105 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 25265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25274499 - 25274649
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  25274499 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaattgagagttcaaag 25274598  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  25274599 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 25274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 6293665 - 6293524
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6293665 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 6293566  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    || ||||||||||||||||||||| ||||| |||||||||||    
T  6293565 atcgacgattcaaatcaattaatggtttgacatccgaaaatc 6293524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 6564009 - 6564158
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  6564009 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 6564108  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    | ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  6564109 tcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 6564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 6577678 - 6577827
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  6577678 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 6577777  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    | ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  6577778 tcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 6577827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 27550794 - 27550643
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttccc-acgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  27550794 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccctccccacgaataaaaatcgagagttcaaa 27550695  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  27550694 gattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27550643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 17562819 - 17562685
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17562819 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 17562720  T
Q  138 ttaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||| ||||||||||||||||| | ||||||||    
T  17562719 ttaatggtttgatatccgaaaatcgcgagcacact 17562685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17630514 - 17630664
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  17630514 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagaacaaag 17630613  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||  |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  17630614 ataaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 1004241 - 1004108
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  1004241 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 1004142  T
Q  138 ttaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||| ||||||||||||||||| | |||||||    
T  1004141 ttaatggtttgatatccgaaaatcgcgagcacac 1004108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 29730563 - 29730411
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt--actcattttttcccttcccacgaataaaaatcgaaagttcaa 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||  |||||||||||||||||||| ||||||||||||| |||||||    
T  29730563 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttttactcattttttcccttcccaagaataaaaatcgagagttcaa 29730464  T
Q  118 agattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  29730463 agattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 29730411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 11918329 - 11918197
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11918329 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 11918230  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  11918229 ttaatggtttgatatccgaaaatcgcgagcaca 11918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 11932899 - 11932767
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11932899 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 11932800  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  11932799 ttaatggtttgatatccgaaaatcgcgagcaca 11932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 13555610 - 13555750
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| || ||||||||||||||||||    
T  13555610 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccactaat-aaaattgagagttcaaagattgacgat 13555707  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||||||||||||||||||| ||||||    
T  13555708 tcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 13555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 16291118 - 16291242
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16291118 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16291217  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  16291218 ttaatggtttgatatccgaaaatca 16291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 31278904 - 31279028
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31278904 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 31279003  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  31279004 ttaatggtttgatatccgaaaatca 31279028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 8196367 - 8196217
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| || ||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8196367 agcaccttaccttcgcataaccaacccccgaatccaaagtctcgagaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 8196268  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  8196267 attaacgattcaaatcaaataatggtttgatatccaaaaatcacgagcaca 8196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 1480306 - 1480429
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  1480306 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 1480405  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  1480406 tcaatggtttgatatccgaaaatc 1480429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 4503487 - 4503364
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4503487 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 4503388  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  4503387 tcaatggtttgatatccgaaaatc 4503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 13275127 - 13275250
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  13275127 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 13275226  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  13275227 tcaatggtttgatatccgaaaatc 13275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 39707252 - 39707403
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  39707252 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcacag 39707351  T
Q  120 attgacgattcaaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||| |||||||||||||| |||| ||||||||||||||||| | ||||||    
T  39707352 attgaagattcaaatcaattaaatggtttgatatccgaaaatcgcgagcaca 39707403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 15675220 - 15675078
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| ||||||||||||||||||||||| |    |||||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  15675220 agcaccttcccttcgcataaccaacccccgaatccaaagtttcgaaaagggtttttactcattttttcccttcccaagaataagaatcgagagttcaaag 15675121  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    || ||||||||||||||||||||| ||||||||||||||||||    
T  15675120 atcgacgattcaaatcaattaatggtttgatatccgaaaatca 15675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 27957322 - 27957185
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| || |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||    
T  27957322 agcacctttccttcgcgtaaccaacacccgaatctaaagttttaagggtttttactcattttttcccttcccacgaataaaaattg--agttcaaaaatt 27957225  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  27957224 gacgattcaaatcaattaatggtttgatatccgtaaatca 27957185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 2256832 - 2256984
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcatttttt-cccttcccacg-aataaaaatcgaaagttcaa 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||||| ||||||||| || |||||||    
T  2256832 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgacaagggtttttactcatttttttcccttcccacggaataaaaattgagagttcaa 2256931  T
Q  118 agattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    | ||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  2256932 atattgacgatgcaaatcaattaatggtttgatatccgaaaatcacgagcaca 2256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 24216116 - 24215984
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  24216116 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgtttcaaatcaa 24216017  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    | |||| ||||||||||||||||| | ||||||    
T  24216016 tcaatggtttgatatccgaaaatcgcgagcaca 24215984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 7063752 - 7063629
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  7063752 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttccctgcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 7063653  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  7063652 tcaatggtttgatatccgaaaatc 7063629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 7096599 - 7096476
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  7096599 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttccctgcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 7096500  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  7096499 tcaatggtttgatatccgaaaatc 7096476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 15683762 - 15683620
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| ||||||||||||||||||||||| |    |||||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  15683762 agcaccttcccttcgcataaccaacccccgaatccaaagtttcgaaaagggtttttactcattttttcccttcccaagaataagaatcgagagttcaaag 15683663  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    || ||||||||||||||||||| | ||||||||||||||||||    
T  15683662 atcgacgattcaaatcaattaaaggtttgatatccgaaaatca 15683620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 12469084 - 12469207
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  12469084 aaccaacccccgaatccaaagtctcgataagggtttttacttatttttttccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 12469183  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  12469184 tcaatggtttgatatccgaaaatc 12469207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 17616605 - 17616482
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  17616605 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgaagattcaaatcaa 17616506  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
      |||| |||||||||||||||||    
T  17616505 ccaatggtttgatatccgaaaatc 17616482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 18900464 - 18900358
Alignment:
Q  65 taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcaca 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||     
T  18900464 taagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaatgattgacgattcaaatcaattaatggtttggtatccaaaaatcacg 18900365  T
Q  165 agcacac 171  Q
    |||||||    
T  18900364 agcacac 18900358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 21185564 - 21185428
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactca-ttttttcccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||| ||    
T  21185564 agcaccttcccttcgcgtaatcaacccctgaatccaaagtcttaagggtttttactcacttttttcccttcccacgaataaaagttgagagttcaaatat 21185465  T
Q  122 tgacgattc-aaatcaattaatgctttgatatccgaa 157  Q
    ||| | ||| ||||||||||||| ||||||| |||||    
T  21185464 tgaaggttcaaaatcaattaatggtttgatacccgaa 21185428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 27880603 - 27880733
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaat 138  Q
    ||||||||| || |||||||||||  ||||||||||| |||| ||||||||||||||||||||||| | || |||||||||||||| |||||||||||||    
T  27880603 aaccaaccctcggatccaaagtctcataagggttttt-ctcactttttcccttcccacgaataaaagtagagagttcaaagattgaagattcaaatcaat 27880701  T
Q  139 taatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||| |||||||||| |||||||| ||||||    
T  27880702 taatggtttgatatccaaaaatcacgagcaca 27880733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 22094837 - 22094926
Alignment:
Q  81 ttttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  22094837 ttttttcccttcccacgaataaaaatcgagagttcaaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 22094926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 15697138 - 15697236
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  15697138 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccatgaataaaaattgagagttcaaa 15697236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 9567403 - 9567282
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatc-aa 137  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| | || ||| |||||||||| |  ||||| | ||    
T  9567403 aaccaacccccgaatccaaagtctcgtaagggtttttactcactttttcccttcccacgaataaaagttgagagtccaaagattgaaggctcaaaactaa 9567304  T
Q  138 ttaatgctttgatatccgaaaa 159  Q
    |||||| ||||||| |||||||    
T  9567303 ttaatgttttgatacccgaaaa 9567282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 27884998 - 27885101
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaat 138  Q
    |||||||||||| ||||||| |||  ||| ||||||| |||||||||||||||||||| ||||||| | || ||||||||||||||||||||||||||||    
T  27884998 aaccaacccccggatccaaaatctcataatggttttt-ctcattttttcccttcccacaaataaaagtagagagttcaaagattgacgattcaaatcaat 27885096  T
Q  139 taatg 143  Q
    |||||    
T  27885097 taatg 27885101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 18041311 - 18041373
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttt 85  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18041311 agcaccttcccttcgtgtaaccaacccccgaatccaaagtcttaggggtttttactcattttt 18041373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 18041374 - 18041434
Alignment:
Q  111 agttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18041374 agttcaaagattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcacac 18041434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 15697231 - 15697273
Alignment:
Q  128 ttcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  15697231 ttcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 15697273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 190 - 406
Target Start/End: Original strand, 44546686 - 44546902
Alignment:
Q  190 caacatatctacataagggtctcttaccaatcaatttgacaaactgaacacaccgaacaatatttgcaaacttcaaatttgtgagcttcaaattttctag 289  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  44546686 caacatatctacataagggtctcttaccaatcaatttgactaactgaacacaccgaacaatatttgcaaacttcaaatttacgagcttcaaattttctag 44546785  T
Q  290 acaatgagtatgtctttggcattcagaattattattattaactttttaacaaccgattactcctaaagaatttaatttgttcttcgttgaattaaattta 389  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44546786 acaatgagtatgtctttagcattcaaaattattattattaactttttaacaatcgattactcctaaagaatttaatttgttcttcgttgaattaaattta 44546885  T
Q  390 tacggtctctgcttctc 406  Q
    ||| || ||||||||||    
T  44546886 taccgtttctgcttctc 44546902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 13492021 - 13491880
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13492021 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgacgat 13491922  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||  ||||||||||||||||||| ||||||    
T  13491921 tcaaatcaattaattgtttgatatccgaaaatcacgagcaca 13491880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16545666 - 16545813
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16545666 agcaccttcccttcgcgtaaccaacccccgaattcagagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 16545765  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16545766 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16545813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 16619996 - 16619849
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16619996 agcaccttcccttcgcgtaaccaacccccgaattcagagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 16619897  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16619896 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16619849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 17211500 - 17211638
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17211500 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatt 17211599  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||| ||| ||||||||| |||||||||||||||||    
T  17211600 gacgatttaaaccaattaatggtttgatatccgaaaatc 17211638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 13478208 - 13478068
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  13478208 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccct-cccacaaataaaaatcgagagttcaaagattgacgat 13478110  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  13478109 tcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13478068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1886882 - 1886732
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1886882 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1886783  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1886782 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 1886732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1900983 - 1900833
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1900983 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1900884  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1900883 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 1900833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 24186077 - 24185927
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa---gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24186077 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 24185978  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  24185977 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 24185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 10449552 - 10449693
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10449552 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggttttcattcattttttcccttcccacgaataaaaatcgagagttcaaagattgacgat 10449651  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| |||||||| |||||||| | ||||||    
T  10449652 tcaaatcaattaatggtttgatattcgaaaatcgcgagcaca 10449693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 17739331 - 17739183
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||    
T  17739331 agcaccttcccttcgcgtaaccaacccccgaatccaaaatcttaagggtttttactcatttttttcccttctcacgaataaaaattgagagttcaaagat 17739232  T
Q  122 tgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  17739231 tgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17739183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 16909784 - 16909646
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16909784 agcaccttcccttcgcgtaaccaacccccgaagtcagagtcttaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatt 16909685  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16909684 gacgattcaaatcaattaatggtttgatatccgaaaatc 16909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13832963 - 13833113
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13832963 agcaccttccctttgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 13833062  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  13833063 attgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 13833113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 17514298 - 17514148
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  17514298 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 17514199  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  17514198 attgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 17514148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17538916 - 17539066
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  17538916 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 17539015  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  17539016 attgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 17539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 18303011 - 18302861
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||| |||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18303011 agcaccttcccttcacgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 18302912  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18302911 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 18302861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 4940242 - 4940091
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||| || ||||||||    
T  4940242 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaattgagagttcaaa 4940143  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  4940142 gattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 4940091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 27965907 - 27965756
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27965907 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 27965808  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
     ||||||||||||||||||||||| ||||| ||||||||||| | |||||||    
T  27965807 gttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacac 27965756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13840993 - 13841143
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13840993 agcaccttccctttgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 13841092  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  13841093 attgacgatttaaatcaattaatggtttgatatctgaaaatcacgagcaca 13841143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 16889700 - 16889546
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  16889700 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccaagaataaaaatcgagagttcaaa 16889601  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacactt 173  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  16889600 gatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacactt 16889546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 27975360 - 27975210
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27975360 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 27975261  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     ||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  27975260 gttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 27975210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 5199129 - 5198979
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  5199129 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttctcaagaataaaaatcgagagttcaaaga 5199030  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||||||||||| |||||||||| |||||| | |||||||    
T  5199029 ttgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacac 5198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 5208246 - 5208097
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  5208246 agcaccttctcttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 5208147  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  5208146 ttgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 5208097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15185752 - 15185903
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15185752 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 15185851  T
Q  120 attgacgattcaaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| | ||||||    
T  15185852 attgacgattcaaatcaattaaatggtttgacatccgaaaatcgcgagcaca 15185903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15200372 - 15200523
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15200372 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 15200471  T
Q  120 attgacgattcaaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| | ||||||    
T  15200472 attgacgattcaaatcaattaaatggtttgacatccgaaaatcgcgagcaca 15200523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 29096942 - 29097082
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa--gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29096942 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaggggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 29097041  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  29097042 ttgacgattcaaatcaattaatggtttgacatccgaaaatc 29097082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 558386 - 558254
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  558386 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 558287  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  558286 ttaatggtttgatatccgaaaatcgcgagcaca 558254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 568296 - 568164
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  568296 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 568197  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  568196 ttaatggtttgatatccgaaaatcgcgagcaca 568164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 29082183 - 29082323
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa--gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29082183 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaggggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 29082282  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||||| ||||| ||| |||||||    
T  29082283 ttgacgattcaaatcaattaatggtttgacatctgaaaatc 29082323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 38255654 - 38255777
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38255654 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 38255753  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| |||||||||||||||||    
T  38255754 ttaatggtttgatatccgaaaatc 38255777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 38263229 - 38263352
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38263229 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 38263328  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| |||||||||||||||||    
T  38263329 ttaatggtttgatatccgaaaatc 38263352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 44075164 - 44075014
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||| |||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44075164 agcactttcacttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 44075065  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  44075064 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 44075014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 4661834 - 4661687
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||    
T  4661834 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaa-tcgagagttcacag 4661736  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4661735 a----cgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 4661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 40680194 - 40680317
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  40680194 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 40680293  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  40680294 tcaatggtttgatatccgaaaatc 40680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 48498643 - 48498520
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  48498643 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 48498544  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| ||||| |||||||||||    
T  48498543 ttaatggtttgacatccgaaaatc 48498520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 36476705 - 36476574
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaat 138  Q
    |||||||||||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  36476705 aaccaacccccggatctaaagtctcataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgaagattcaaatcaat 36476606  T
Q  139 taatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||| ||||||||| ||||||||| ||||||    
T  36476605 taatggtttgatatctgaaaatcacgagcaca 36476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 2549177 - 2549310
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  2549177 aaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 2549276  T
Q  137 attaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||| ||||||||||||||||| | ||||||    
T  2549277 attaatggtttgatatccgaaaatcgcgagcaca 2549310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 2563063 - 2563196
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  2563063 aaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 2563162  T
Q  137 attaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||| ||||||||||||||||| | ||||||    
T  2563163 attaatggtttgatatccgaaaatcgcgagcaca 2563196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 16120626 - 16120492
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16120626 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16120527  T
Q  138 tt--aatgctttgatatccgaaaatcacaagcaca 170  Q
    ||  |||| ||||||||||||||||| | ||||||    
T  16120526 ttaaaatggtttgatatccgaaaatcgcgagcaca 16120492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 16147366 - 16147232
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16147366 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16147267  T
Q  138 tt--aatgctttgatatccgaaaatcacaagcaca 170  Q
    ||  |||| ||||||||||||||||| | ||||||    
T  16147266 ttaaaatggtttgatatccgaaaatcgcgagcaca 16147232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 29023647 - 29023770
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29023647 aaccaacccccgaatccaaagtctcgacaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 29023746  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  29023747 tcaatggtttgatatccgaaaatc 29023770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 19384060 - 19383908
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  19384060 agcaccttcccttcgcgtaaccaacccccgaatccaa-gtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 19383962  T
Q  120 attgacgattcaaatc-aattaatgctttgatatccgaaaatcacaagcacact 172  Q
    || ||||||||||||| ||| |||| ||||| ||||||||||| | ||||||||    
T  19383961 atcgacgattcaaatcaaatcaatggtttgacatccgaaaatcgcgagcacact 19383908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16227984 - 16228108
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaat-aaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||    
T  16227984 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaaattgagagttcaaagatttacgattcaaatca 16228083  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  16228084 atcaatggtttgatatccgaaaatc 16228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16244862 - 16244986
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaat-aaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  16244862 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaaattgagagtttaaagattgacgattcaaatca 16244961  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  16244962 atcaatggtttgatatccgaaaatc 16244986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 27435481 - 27435605
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  27435481 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaa 27435580  T
Q  138 -ttaatgctttgatatccgaaaatc 161  Q
     | |||| |||||||||||||||||    
T  27435581 gtaaatggtttgatatccgaaaatc 27435605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 27444511 - 27444635
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||    
T  27444511 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttctcttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaa 27444610  T
Q  138 -ttaatgctttgatatccgaaaatc 161  Q
     | |||| |||||||||||||||||    
T  27444611 gtaaatggtttgatatccgaaaatc 27444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 43600819 - 43600939
Alignment:
Q  41 aaccaacccccgaatccaaagtct-taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaatt 139  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||| | || ||||| |||||||| ||||||||||||||    
T  43600819 aaccaacccccgaatccaaagtctcttaaggtttttactcattttttcccttcccacggataaaagttgagagttcgaagattgaagattcaaatcaatt 43600918  T
Q  140 aatgctttgatatccgaaaat 160  Q
    |||| ||||||||||||||||    
T  43600919 aatggtttgatatccgaaaat 43600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 43139106 - 43139246
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct-taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||| | || |||||||||||    
T  43139106 agcaccttcccttcgcgtaaccaacccccgaatccaa-gtctctaagggtttttactcactttttcctttcccacgaataaaagttgagagttcaaagat 43139204  T
Q  122 tgacgattcaa-atcaattaatgctttgatatccgaaaatca 162  Q
    ||| | ||||| | ||||| ||| ||||||| ||||||||||    
T  43139205 tgaaggttcaataccaattgatggtttgatacccgaaaatca 43139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 29032085 - 29032133
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcatttttt 86  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||    
T  29032085 aaccaacccccgaatccaaagtctcgacaagggtttttactcatttttt 29032133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 9947 - 9802
Alignment:
Q  25 cacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattga 124  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9947 cacattcccttcgcgtaaccaacgcccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattga 9848  T
Q  125 cgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  9847 cgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 9802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 8719798 - 8719657
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8719798 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgacgat 8719699  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  8719698 tcaaatcaattaatggtttgatatccgaaaatcacgagcaca 8719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 24920694 - 24920835
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24920694 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgacgat 24920793  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| ||||||||||||||||| | ||||||    
T  24920794 tcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 24920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 16302917 - 16302770
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16302917 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttctcacgaataaaaatcgagagttcaaagatt 16302818  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16302817 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16302770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 21708517 - 21708370
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  21708517 agcaccttccctgcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttctcacgaataaaaatcgagagttcaaagatt 21708418  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  21708417 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 21708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 5487073 - 5486923
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  5487073 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttacttattttttcccttcccacgaataaaaatcgagagttcaaag 5486974  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5486973 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 5486923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 27537626 - 27537776
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27537626 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 27537725  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  27537726 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27537776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 27551835 - 27551985
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27551835 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 27551934  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  27551935 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27551985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 35090288 - 35090139
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35090288 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 35090189  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcac 169  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  35090188 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 35090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 15389365 - 15389214
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactc-attttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  15389365 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactccattttttcccttcccacgaataaaaatcgagagttcaaa 15389266  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  15389265 gattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 15389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16635625 - 16635775
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16635625 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16635724  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16635725 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16635775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16645582 - 16645732
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16645582 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16645681  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16645682 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16645732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 30823131 - 30822981
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30823131 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 30823032  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30823031 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30822981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 12451468 - 12451321
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  12451468 agcaccttcccttcgcgtaaccaacccccgaattcagagtcttaagggtttttactcattttttcccttcccacgaataaaaatttagagttcaaagatt 12451369  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  12451368 gacgattcaaatcaattaatgatttgatatctgaaaatcacgagcaca 12451321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 18205088 - 18204938
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18205088 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaga 18204989  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  18204988 ttgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacac 18204938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 18220087 - 18219938
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18220087 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaga 18219988  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  18219987 ttgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 5996869 - 5997019
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5996869 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgacaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 5996968  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  5996969 attgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 5997019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13492244 - 13492392
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||    
T  13492244 agcacattcccttcccgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttttcccttcccatgaataaaaatcgtgagttcaaagat 13492343  T
Q  122 tgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||| |||||||| | |||||||| ||||||    
T  13492344 tgacgattcaaatcaattaatggtttgatattcaaaaatcacgagcaca 13492392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 28267743 - 28267593
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28267743 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 28267644  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  28267643 attgacgattcgaatcaattaatggtttgacatccgaaaatcacgagcaca 28267593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 28346492 - 28346342
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28346492 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 28346393  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  28346392 attgacgattcgaatcaattaatggtttgacatccgaaaatcacgagcaca 28346342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 30995477 - 30995327
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  30995477 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 30995378  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  30995377 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 30995327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 25713962 - 25714111
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  25713962 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagacttcaaag 25714061  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcac 169  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  25714062 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 25714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 18112140 - 18112289
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18112140 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaga 18112239  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||    
T  18112240 ttgatgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18112289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 18126685 - 18126834
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  18126685 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaga 18126784  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||    
T  18126785 ttgatgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18126834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 33300341 - 33300485
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||| ||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  33300341 ttcccttcgcgtaactaacccccgaatccaaagtctcgacaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattaac 33300440  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  33300441 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 33300485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13828005 - 13828156
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13828005 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 13828104  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| |||||||||||||||||||| |||||||||| |||||||| ||||||    
T  13828105 gattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 13828156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 14475800 - 14475951
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  14475800 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 14475899  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  14475900 gattgacgattcagatcaattaatggtttgatatccgaaaatcacgagcaca 14475951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16589227 - 16589377
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16589227 agcaccttcccttcgcataaccaacccccgaattcaaagtctcgaaaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16589326  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16589327 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16589377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 16606153 - 16606003
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16606153 agcaccttcccttcgcataaccaacccccgaattcaaagtctcgaaaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16606054  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16606053 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16606003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 27960488 - 27960637
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  27960488 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttt-actcattttttcccttcccaagaataaaaatcgagagttcaaag 27960586  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  27960587 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 27960637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 11063894 - 11064035
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  11063894 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 11063991  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    || ||||||||||||| ||||||||||||||||||| |||||||    
T  11063992 tcaaaatcaattaatggtttgatatccgaaaatcacgagcacac 11064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 20530649 - 20530496
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taaggg-tttttactcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||||| |||||||||||||||||||||||   | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20530649 agcaccttcccttcgcgtgaccaacccccgaatccaaagtctcgatgagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 20530550  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  20530549 gattgacgattcaaatcaattaatggtttgatatccgaaaatcaagagcacact 20530496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 25552627 - 25552770
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||| ||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25552627 agcaccttcccttcacgtaaacaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 25552726  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcac 163  Q
    ||| |||||||||||||||||||  |||||||||||||||||||    
T  25552727 attaacgattcaaatcaattaatagtttgatatccgaaaatcac 25552770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 28304441 - 28304591
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  28304441 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 28304540  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  28304541 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 28304591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 24485393 - 24485252
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24485393 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 24485294  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    || ||||||||||||||||||||| ||||| |||||||||||    
T  24485293 atcgacgattcaaatcaattaatggtttgacatccgaaaatc 24485252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 23927801 - 23927952
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||| |||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23927801 agcaccttctcttcgcgtaaccaacccccgaatccaaagtcccgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 23927900  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  23927901 aattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 23927952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 25993794 - 25993944
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||| |||||||||||||||||||||    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  25993794 agcaccttcccttcgcgtaaacaacccccgaatccaaagtctcgacaagggtttttactcatttt-tcccttctcacgaataaaaatcgagagttcaaag 25993892  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  25993893 attgacgattcaaatcaattaatggtttgatatccgaaaatcaagagcacac 25993944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 5008154 - 5008304
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||  | ||||||| || || |||||||||    
T  5008154 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcttatgaataaatattgagagttcaaag 5008253  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5008254 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 5008304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25699808 - 25699958
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||| |||||||  |||||||||||| |||||||||    
T  25699808 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttctcttcccaaaaataaaaatcgagagttcaaag 25699907  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| | |||||||||||||||||| ||||||||||||||||||| ||||||    
T  25699908 attaaagattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 19826531 - 19826377
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt----actcattttttcccttcccacgaataaaaatcgaaagttc 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||| |||||    ||||||||||||||||||||||||||||||| || |||||    
T  19826531 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgaggttttttttttactcattttttcccttcccacgaataaaaattgagagttc 19826432  T
Q  116 aaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19826431 aaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 19826377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16097775 - 16097898
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16097775 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16097874  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  16097875 tcaatggtttgatatccgaaaatc 16097898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 18587362 - 18587485
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18587362 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 18587461  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  18587462 tcaatggtttgatatccgaaaatc 18587485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 25654216 - 25654339
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  25654216 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgaaagttcaaagattgatgattcaaatcaa 25654315  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  25654316 tcaatggtttgatatccgaaaatc 25654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 27047199 - 27047046
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taaggg-tttttactca-ttttttcccttcccacgaataaaaatcgaaagttcaa 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||    ||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  27047199 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaaagggttttttactcatttttttcccttcccaagaataaaaatcgagagttcaa 27047100  T
Q  118 agattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||| | |||||||    
T  27047099 agatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacac 27047046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 23982638 - 23982514
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaa-aatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  23982638 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaagaattgagagttcaaagattgacgattcaaatca 23982539  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  23982538 atcaatggtttgatatccgaaaatc 23982514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 27057443 - 27057291
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taaggg-tttttactca-ttttttcccttcccacgaataaaaatcgaaagttcaa 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||    ||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  27057443 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaaagggttttttactcatttttttcccttcccaagaataaaaatcgagagttcaa 27057344  T
Q  118 agattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  27057343 agatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 27057291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 21358546 - 21358422
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaa-aatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  21358546 aaccaacacccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaagaattgagagttcaaagattgacgattcaaatca 21358447  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  21358446 atcaatggtttgatatccgaaaatc 21358422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 23962528 - 23962404
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaa-aatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  23962528 aaccaacacccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaagaattgagagttcaaagattgacgattcaaatca 23962429  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  23962428 atcaatggtttgatatccgaaaatc 23962404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 335388 - 335295
Alignment:
Q  69 ggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  335388 ggtttttactcattttttccctttccacgaataaaaattgagagttcaaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 335295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 15141656 - 15141728
Alignment:
Q  98 aataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  15141656 aataaaaattgagagttcaaagattgacgattcaaatcaattaatggtttgatatctgaaaatcgcgagcaca 15141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 25693167 - 25693234
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttc 87  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||    
T  25693167 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttc 25693234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 18842945 - 18843007
Alignment:
Q  100 taaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||| || ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  18842945 taaaaattgagagttcaaagattgacgatttaaaccaattaatggtttgatatccgaaaatca 18843007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 9819 - 9958
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9819 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 9918  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  9919 gacgattcaaatcaattaatggtttgatatccgaaaatca 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 128; Significance: 5e-66; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 194971 - 195118
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  194971 agcaccttctcttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 195070  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  195071 gacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 188781 - 188931
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa---gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  188781 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcaacaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 188880  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  188881 attgacgattcaaatcaattaacggtttgatatccgaaaatcacgagcaca 188931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 159312 - 159462
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  159312 agcaccttcccttcgcgtaaccaacccccgaatccaa-gtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 159410  T
Q  120 attgacgattcaaatc-aattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||| |||| ||||||||||||||||| | ||||||    
T  159411 atcgacgattcaaatcaaatcaatggtttgatatccgaaaatcgcgagcaca 159462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 18010295 - 18010442
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18010295 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 18010394  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  18010395 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18010442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 55584307 - 55584160
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  55584307 agcaccttcccttcgcgtaaccaacccccgaatccagagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgatatttcaaagatt 55584208  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  55584207 gacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 55584160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 10640600 - 10640752
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10640600 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 10640699  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  10640700 attgacgattcaaatcaattaatggttggatatccgaaaatcacgagcacact 10640752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 4522364 - 4522214
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4522364 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 4522265  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  4522264 attgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 4522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 25652596 - 25652448
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25652596 agcactttcccttcgcgtaaccagctcccgaatccaaagtcttgagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 25652497  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
     |||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  25652496 aacgattaaaatcaattaatggtttgatatccgaaaatcacgagcacac 25652448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 8092886 - 8092734
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8092886 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 8092787  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  8092786 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 8092734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 52297944 - 52298096
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  52297944 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcacgataagggtttttactcactttttcccttcccacgaataaaaatcgagagttcaaag 52298043  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  52298044 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 52298096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 773403 - 773553
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  773403 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaagatcgagagttcaaag 773502  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  773503 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 773553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 8101691 - 8101541
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8101691 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 8101592  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  8101591 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 8101541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 12425366 - 12425216
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  12425366 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttttttccttcccatgaataaaaatcgagagttcaaag 12425267  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12425266 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 12425216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 27341662 - 27341512
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27341662 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 27341563  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  27341562 atggacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 27341512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 26034105 - 26033960
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26034105 ttcccttcgcgtaaccaacccccgaatccaaagtctcgacaagggtttttactcattttttcctttcccacgaataaaaatcgagagttcaaagattgac 26034006  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  26034005 gattcaaatcaattaatggtttgatatccgaaaatcacgagcacac 26033960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 20865809 - 20865659
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20865809 agcaccttccctttgcataaccaacccccgaatccaaagtttcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 20865710  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20865709 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 20865659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1875494 - 1875344
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1875494 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1875395  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  1875394 atcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 1875344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1889609 - 1889459
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1889609 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1889510  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  1889509 atcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 1889459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 12998785 - 12998935
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa---gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  12998785 agcaccttcccttcgcgtaaccaacccccgattccaaagtcttgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagtgcaaag 12998884  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12998885 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 12998935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 21530255 - 21530105
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  21530255 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcatttttttccttcccacgaataaaaatcgagagttcaaag 21530156  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21530155 atcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 21530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 26210530 - 26210390
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa--gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26210530 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaggggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 26210431  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  26210430 ttgacgattcaaatcaatcaatggtttgatatccgaaaatc 26210390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 26219290 - 26219150
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa--gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26219290 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgaaggggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 26219191  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  26219190 ttgacgattcaaatcaatcaatggtttgatatccgaaaatc 26219150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 4747545 - 4747401
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||    
T  4747545 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttctcttcccaagaataaaaatcgagagttcaaagatcgac 4747446  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||| ||||||||||| | ||||||    
T  4747445 gattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 4747401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 19644994 - 19644871
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19644994 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 19644895  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  19644894 tcaatggtttgatatccgaaaatc 19644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 21810997 - 21810858
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21810997 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccatgaataaaaatcgagagttcaaagattgacgattcaaatcaa 21810898  T
Q  138 ttaatgctttgatatccgaaaatcacaagcacacttttct 177  Q
    |||||| ||||| ||||||||||| | |||||| ||||||    
T  21810897 ttaatggtttgacatccgaaaatcgcgagcacaattttct 21810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 21398948 - 21398827
Alignment:
Q  44 caacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaatta 140  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  21398948 caacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaatta 21398849  T
Q  141 atgctttgatatccgaaaatca 162  Q
    ||| ||||||||||||||||||    
T  21398848 atggtttgatatccgaaaatca 21398827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 19760059 - 19760183
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19760059 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 19760158  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  19760159 ttaaatggtttgatatccgaaaatc 19760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 19774815 - 19774939
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19774815 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 19774914  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  19774915 ttaaatggtttgatatccgaaaatc 19774939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 14736913 - 14736790
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  14736913 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttccctgcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 14736814  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  14736813 tcaatggtttgatatccgaaaatc 14736790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 10786892 - 10787024
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  10786892 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcaagagttcaaagattgacgattcaaatcaa 10786991  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  10786992 ttaatggtttgacatccgaaaatcgcgagcaca 10787024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 14718628 - 14718505
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||| ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  14718628 aaccaacccccgaatccaaagtctcgataagtgtttttactcattttttccctgcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 14718529  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  14718528 tcaatggtttgatatccgaaaatc 14718505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 34842931 - 34843054
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  34842931 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatttagagttcaaagattgacgattcaaatcaa 34843030  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| ||| |||||||||||||    
T  34843031 tcaatggtttaatatccgaaaatc 34843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 25247286 - 25247163
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  25247286 aaccaacccccgaatccaaagtctcaataagggttttttactcattttt-cccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 25247188  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| ||| |||||||||||||    
T  25247187 atcaatggtttaatatccgaaaatc 25247163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 136468 - 136321
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  136468 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 136369  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||| ||||||||||||||| ||||||||| ||||||||| ||||||    
T  136368 gacgactcaaatcaattaatggtttgatatctgaaaatcacgagcaca 136321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 145430 - 145291
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  145430 agcaccttccctccgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagatt 145331  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  145330 gacgactcaaatcaattaatggtttgatatccgaaaatca 145291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 2385424 - 2385563
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2385424 agcaccttcccttcgtgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 2385523  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  2385524 gacgattcaaatcaattaatggtttgatatccgaaaatca 2385563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13452287 - 13452437
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13452287 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 13452386  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13452387 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13452437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 13461182 - 13461332
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13461182 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 13461281  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13461282 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13461332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 3431551 - 3431401
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3431551 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 3431452  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  3431451 attgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 3431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 31541413 - 31541563
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31541413 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 31541512  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31541513 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31541563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 31549982 - 31550132
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31549982 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 31550081  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31550082 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31550132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 20502369 - 20502516
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20502369 agcaccttcccttcgcgtaaccaacccccgaattcagagtcttaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatt 20502468  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  20502469 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 20502516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 23355560 - 23355413
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  23355560 agcaccttcccttcgcgtaatcaacccccgaatccaaagtcttaagggtttttactcattttttccctttccacgaataaaaatcgagagttcaaagatt 23355461  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
      ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  23355460 atcgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 23355413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 43456299 - 43456451
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43456299 agcaccttcccttcgcgtaaccaacccccaaatccaaagtcttgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 43456398  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  43456399 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 43456451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 41744652 - 41744502
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41744652 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgacaaggatttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 41744553  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  41744552 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 41744502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 35097528 - 35097375
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  35097528 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcatacgaataaaaatcgagagttcaaag 35097429  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacactt 173  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  35097428 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacactt 35097375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 23952372 - 23952522
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  23952372 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccatcccacgaataaaaatcgagagttcaaag 23952471  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  23952472 attgacgattcaaatcgattaatggtttgatatccgaaaatcacgagcaca 23952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 28991256 - 28991106
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  28991256 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaagatcgagagttcaaag 28991157  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  28991156 atttacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 28991106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 32135253 - 32135108
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaagattga 124  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  32135253 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattaa 32135154  T
Q  125 cgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32135153 cgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 32135108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 21497031 - 21496890
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  21497031 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttttttccttcccacgaataaaaatcgagagttcaaag 21496932  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    | |||||||||||||||||||||| ||||||||||||||||||    
T  21496931 a-tgacgattcaaatcaattaatggtttgatatccgaaaatca 21496890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 22479889 - 22480025
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  22479889 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaataaagagttcaaagattgac 22479988  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22479989 gattcaaatcaattaatggtttgatatccaaaaatca 22480025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 21245021 - 21244870
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  21245021 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 21244922  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| |||||||||| |||||| | |||||||    
T  21244921 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacac 21244870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 46776951 - 46776801
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  46776951 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 46776852  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     ||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  46776851 gttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 46776801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 13804005 - 13803853
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taaggg--tttttactcattttttcccttcccacgaataaaaatcgaaagttcaa 117  Q
    ||||| |||||||||| ||||||||||||| |||||||||||   | ||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  13804005 agcaccttcccttcgcataaccaacccccggatccaaagtctcgatgagggtttttttactcattttttcccttcccacgaataaaaatcgagagttcaa 13803906  T
Q  118 agattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13803905 agattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 21055133 - 21055280
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||| | || ||||||||||||    
T  21055133 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcaagggtttttactaactttttcacttcccacgaataaaagttgagagttcaaagatt 21055232  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21055233 aacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 21055280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 38123576 - 38123426
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaa--agtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| |||||||||||||||||||||||||||||||    | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  38123576 agcaccttcccttcgcgtaaccaacccccgaatccaattttttttaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 38123477  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||||||||||| ||||| ||||||||||| | |||||||    
T  38123476 ttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacac 38123426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 13477298 - 13477442
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    |||||| ||| |||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13477298 ttccctacgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttccctgcccacgaataaaaatcgagagttcaaagattgac 13477397  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||| |||||||||||| ||||||||||||||||| | ||||||    
T  13477398 gattctaatcaattaatggtttgatatccgaaaatcgcgagcaca 13477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 22495867 - 22495991
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22495867 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 22495966  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  22495967 ttaatggtttgatatccgaaaatca 22495991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 32608850 - 32608986
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttt-tcccttcccacgaataaaaatcgaaagttcaaagattga 124  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  32608850 ttcccttcgcgtaaccaacccccgaatccaaagtctcaataagggtttttactcatttttgtcccttcccacgaataaaaattgagagttcaaagattga 32608949  T
Q  125 cgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||| |||| |||||||||||||||||    
T  32608950 cgattcaaatcaatcaatgatttgatatccgaaaatc 32608986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 3350657 - 3350534
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  3350657 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 3350558  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| |||||||||||||||||    
T  3350557 ttaatggtttgatatccgaaaatc 3350534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 25337154 - 25337294
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  25337154 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 25337251  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||||| |||||||| |||| ||||||    
T  25337252 tcaaaatcaattaatggtttgacatccgaaactcacgagcaca 25337294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 8513971 - 8514094
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  8513971 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 8514070  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  8514071 tcaatggtttgatatccgaaaatc 8514094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 12464176 - 12464053
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  12464176 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 12464077  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  12464076 tcaatggtttgatatccgaaaatc 12464053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 22472829 - 22472952
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22472829 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 22472928  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  22472929 tcaatggtttgatatccgaaaatc 22472952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 34336743 - 34336620
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  34336743 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 34336644  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  34336643 tcaatggtttgatatccgaaaatc 34336620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 18780115 - 18780232
Alignment:
Q  46 acccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaat 142  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  18780115 acccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaattaat 18780214  T
Q  143 gctttgatatccgaaaat 160  Q
    | ||||||||||||||||    
T  18780215 ggtttgatatccgaaaat 18780232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 28460033 - 28460189
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaa------gtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagt 113  Q
    ||||| ||||||||||||||||||||||||||||||||      ||||   ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28460033 agcaccttcccttcgcgtaaccaacccccgaatccaaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagt 28460132  T
Q  114 tcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||||||| ||||||    
T  28460133 tcaaagattaacgattcaattcaatcaatggtttgatatccgaaaatcacgagcaca 28460189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 27311917 - 27311794
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  27311917 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttccctgcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 27311818  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  27311817 tcaatggtttgatatccgaaaatc 27311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 51055256 - 51055113
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||  ||||||  |||||||||||| |||||||||||||||  |||||||||||||||||||||| | || ||||||||||||||||||    
T  51055256 ttcccttcgcgtaattaaccccaaaatccaaagtctcaagggtttttactcacgttttcccttcccacgaataaaagttgagagttcaaagattgacgat 51055157  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    || |||||||||||| |||||||| |||||||||| ||||||||    
T  51055156 tcgaatcaattaatggtttgatattcgaaaatcacgagcacact 51055113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16135391 - 16135514
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  16135391 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcctttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16135490  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||| ||||    
T  16135491 tcaatggtttgatatccgagaatc 16135514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 31553630 - 31553763
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  31553630 aaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgtttcaaatca 31553729  T
Q  137 attaatgctttgatatccgaaaatcacaagcaca 170  Q
    || |||| ||||||||||||||||| | ||||||    
T  31553730 atcaatggtttgatatccgaaaatcgcgagcaca 31553763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 31562764 - 31562897
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  31562764 aaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgtttcaaatca 31562863  T
Q  137 attaatgctttgatatccgaaaatcacaagcaca 170  Q
    || |||| ||||||||||||||||| | ||||||    
T  31562864 atcaatggtttgatatccgaaaatcgcgagcaca 31562897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 36848631 - 36848507
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taaggg-tttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||| | || |||||||||||||| |||| |||||||    
T  36848631 aaccaacccccgaatccaaagtctcttaagggatttttactcactttttcccttcccacgaataaaagttgagagttcaaagattgaagatttaaatcaa 36848532  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| |||||||| |||||||||    
T  36848531 ttaatggtttgatattcgaaaatca 36848507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 52101396 - 52101542
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  52101396 agcaccttccctttgcgtaaccaacccccgaatccag-gtcttaaaggtttttactcattttttccct-cccacgaataaaaatcgagagttcaaagatt 52101493  T
Q  123 gacgattc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || | ||| ||| |||| ||||  |||||| ||||||||||| ||||||    
T  52101494 gaaggttcaaaaccaatcaatggcttgatacccgaaaatcacgagcaca 52101542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 8241007 - 8240865
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct-taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacga 127  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | || |||||||||||||| |     
T  8241007 ttcccttcgcgtaatcaacccctgaatccaaagtctctaagggtttttactcactttttcccttcccacgaataaaagttgagagttcaaagattgaagg 8240908  T
Q  128 ttc-aaatcaattaatgctttgatatccgaaaatcacaagcac 169  Q
    ||| ||| |||| ||||  ||||||  ||||||||||||||||    
T  8240907 ttcaaaaccaatcaatggcttgatactcgaaaatcacaagcac 8240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 2248413 - 2248532
Alignment:
Q  41 aaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattc-aaatcaa 137  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||| | |  |||||||||||||| | ||| ||| |||    
T  2248413 aaccaacccccgaatccaaagtctcataagggtttttactcactttttcccttctcacgaataaaagttgggagttcaaagattgaaggttcaaaaccaa 2248512  T
Q  138 ttaatgctttgatatccgaa 157  Q
    |||||| ||||||| |||||    
T  2248513 ttaatggtttgatacccgaa 2248532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 4282638 - 4282520
Alignment:
Q  41 aaccaacccccgaatccaaagtctta-agggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattc-aaatcaat 138  Q
    |||||||||||| ||||||||| ||| | || ||||||||| |||||| |||||||||||||||| | || |||||||||||||| | ||| ||| ||||    
T  4282638 aaccaacccccggatccaaagttttataagggttttactcactttttctcttcccacgaataaaagttgagagttcaaagattgaaggttcaaaaccaat 4282539  T
Q  139 taatgctttgatatccgaa 157  Q
    ||||| ||||||| |||||    
T  4282538 taatggtttgatacccgaa 4282520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 5e-63; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 4837512 - 4837360
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4837512 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 4837413  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4837412 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 4837360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 4842957 - 4842805
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4842957 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 4842858  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4842857 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 4842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26871362 - 26871212
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26871362 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 26871263  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  26871262 attgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 26871212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25719271 - 25719418
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  25719271 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttttccttcccacgaataaaaattgagagttcaaagatt 25719370  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || |||||||||||||||||| |||||||| |||||||||| ||||||    
T  25719371 gatgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 25719418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 36248962 - 36249113
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36248962 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 36249061  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  36249062 attgacgattcaaatcaattaatggtttgatattcgaaaatcacgagcacac 36249113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17529285 - 17529435
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | |||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  17529285 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgaggggttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 17529384  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  17529385 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 22103574 - 22103424
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  22103574 agcaccttcccttcgcgtaaccaacccccgaatccaaggtctcgataagggtttttactcatttttttccttcccacgaataaaaatcgagagttcaaag 22103475  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  22103474 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 22103424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 25585001 - 25584851
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25585001 agcaccttccctttgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 25584902  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25584901 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25584851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 30939742 - 30939892
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30939742 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagagtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 30939841  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30939842 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30939892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 36252443 - 36252303
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  36252443 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctgaagggtttttactcattttttcccttctcatgaataaaaatcgagagttcaaagatt 36252344  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcac 163  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  36252343 gacgattcaaatcaattaatggtttaatatccgaaaatcac 36252303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17975892 - 17976043
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17975892 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaa 17975991  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  17975992 gattgacgattcaaatcaattaatggtttgttatccgaaaatcacgagcaca 17976043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 23922996 - 23922863
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  23922996 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagagtttttactcattttttctcttcccacgaataaaaattgagagttcaaagattgacgat 23922897  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||| ||||||||| ||||||||    
T  23922896 tcaaatcaattaatggtttgatatctgaaaatca 23922863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15832165 - 15832315
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15832165 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 15832264  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||| ||||||||| | ||||||    
T  15832265 attgacgattcaaatcaattaatggtttgataaccgaaaatcgcgagcaca 15832315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 36576693 - 36576543
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  36576693 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 36576594  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  36576593 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 36576543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 17662418 - 17662267
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17662418 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 17662319  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||  |||||||||||||||||| ||||||    
T  17662318 gattgacgattcaaatcagttaatggcttgatatccgaaaatcacgagcaca 17662267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25796786 - 25796937
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25796786 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaa 25796885  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25796886 gattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16761054 - 16761204
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16761054 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16761153  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16761154 atcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16761204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 16775491 - 16775641
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16775491 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16775590  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16775591 atcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 14335883 - 14335742
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  14335883 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 14335786  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    || ||||||||||||| ||||||||||||||||||| |||||||    
T  14335785 tcaaaatcaattaatggtttgatatccgaaaatcacgagcacac 14335742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 17681547 - 17681396
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17681547 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaa 17681448  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||  ||||||| |||||||||| ||||||    
T  17681447 gattgacgattcaaatcagttaatggcttgatattcgaaaatcacgagcaca 17681396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1388242 - 1388092
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1388242 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1388143  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  1388142 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 1388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 39836160 - 39836010
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39836160 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 39836061  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  39836060 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 39836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 39844202 - 39844052
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39844202 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 39844103  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  39844102 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 39844052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 6582806 - 6582682
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6582806 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 6582707  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  6582706 ttaatggtttgatatccgaaaatca 6582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 14204769 - 14204901
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  14204769 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaacaaaaatcgagagttcaaagattgacgattcaaatcaa 14204868  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  14204869 ttaatggtttgatatccgaaaatcgcgagcaca 14204901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 14219410 - 14219542
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  14219410 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaacaaaaatcgagagttcaaagattgacgattcaaatcaa 14219509  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  14219510 ttaatggtttgatatccgaaaatcgcgagcaca 14219542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 19851053 - 19851177
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  19851053 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagtgttcaaagattgacgattcaaatcaa 19851152  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  19851153 ttaatggtttgatatccgaaaatca 19851177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 19857089 - 19857213
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  19857089 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagtgttcaaagattgacgattcaaatcaa 19857188  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  19857189 ttaatggtttgatatccgaaaatca 19857213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 23601000 - 23600858
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| || |||||| || ||||||||||||||||||    
T  23601000 ttcccttcgcgtaaccaacccacgaaaccaaagtcttaagggtttttactcattttttccc-tcccacaaaaaaaaattgagagttcaaagattgacgat 23600902  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    || ||||||||||||| ||||| ||||||||||||| |||||||    
T  23600901 tcaaaatcaattaatggtttgacatccgaaaatcacgagcacac 23600858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17129553 - 17129677
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  17129553 aaccaagccccgaatccaaagtctcgataagggtttttactcattttttcccttccctcgaataaaaattgagagttcaaagattgacgattcaaatcaa 17129652  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  17129653 ttaatggtttgatatccgaaaatca 17129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 26912675 - 26912534
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct--taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| |||||||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||| | || ||||||||||    
T  26912675 agcaccttcccttcgcgtaaccaacccccgaatccaaaatctcataagggtttttactcactttttcccttcccacgaataaaagtagagagttcaaaga 26912576  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||  |||||||||||||||||  |||||||||||||||||    
T  26912575 ttgaatattcaaatcaattaatgagttgatatccgaaaatca 26912534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 31000737 - 31000605
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  31000737 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 31000638  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| |||||||||| |||||| | ||||||    
T  31000637 ttaatggtttgatatccaaaaatcgcgagcaca 31000605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 16190521 - 16190398
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  16190521 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcgaagattgacgattcaaatcaa 16190422  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  16190421 tcaatggtttgatatccgaaaatc 16190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 22418386 - 22418509
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22418386 aaccaacccccgaatccaaagtctcgataagggtttttactcatttttccccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 22418485  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  22418486 tcaatggtttgatatccgaaaatc 22418509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 31207628 - 31207505
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  31207628 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaa 31207529  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  31207528 tcaatggtttgatatccgaaaatc 31207505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 4583820 - 4583972
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||| ||||| |||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  4583820 agcaccttctcttcgtgtaaccaacccc-gaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 4583918  T
Q  120 at---tgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||   |||||||| ||||||||||||| ||||||||||| ||||||| ||||||    
T  4583919 attgatgacgatttaaatcaattaatggtttgatatccggaaatcacgagcaca 4583972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 22366857 - 22366732
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  22366857 aaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatca 22366758  T
Q  137 attaatgctttgatatccgaaaatca 162  Q
    |||||||  |||| ||||||||||||    
T  22366757 attaatgggttgacatccgaaaatca 22366732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 23092980 - 23093102
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||    
T  23092980 aaccaacccccgaatccaaagtctcgataagggtttt-actcattttttcctttcccacgaataaaaattgagagttcaaaaattgacgattcaaatcaa 23093078  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  23093079 tcaatggtttgatatccgaaaatc 23093102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 28481459 - 28481601
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  28481459 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggttttaactcatttttccccttcccacgaataaaaatcgagagttcaaagattgacgat 28481558  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  28481559 tcaaatcaattaatggtttgatatccgaaaatcacgagcacac 28481601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 19655704 - 19655563
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  19655704 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttttccctcccacgaataaaaatcgagagttcaaagattgacgat 19655605  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| |||||||||| |||||||| ||||||    
T  19655604 tcaaatcaattaatggtttgatatccaaaaatcacgagcaca 19655563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 15943138 - 15942988
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15943138 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 15943039  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  15943038 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 15942988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 15951648 - 15951498
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15951648 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 15951549  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  15951548 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 15951498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26731783 - 26731633
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa---gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26731783 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 26731684  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  26731683 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 26731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 35140081 - 35140231
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35140081 agcaccttcccttcgcataaccaacccccgaatccaaagtctcaataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 35140180  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35140181 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 35140231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 35148422 - 35148572
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35148422 agcaccttcccttcgcataaccaacccccgaatccaaagtctcaataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 35148521  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35148522 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 35148572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 38154149 - 38153999
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38154149 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 38154050  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  38154049 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 38153999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 21151542 - 21151689
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21151542 agcaccttcccttcgcgtaaccaacccccgaattcagagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagatt 21151641  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| | ||||||||||||||| | ||||||    
T  21151642 gacgattcaaatcaattaatggtgtgatatccgaaaatcgcgagcaca 21151689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 38611545 - 38611414
Alignment:
Q  40 taaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38611545 taaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattaacgattcaaatcaatt 38611446  T
Q  140 aatgctttgatatccgaaaatcacaagcacac 171  Q
    |||| ||||||||||||||||||| |||||||    
T  38611445 aatgatttgatatccgaaaatcacgagcacac 38611414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 6856101 - 6855957
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  6856101 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcaagagttcaaagattgac 6856002  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  6856001 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 6855957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 34068815 - 34068673
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  34068815 ttcccttcgcgtaaccaactcccgaatccaaagtcttaagggtttttactcattttttccattcccacggataaaaatcgagagttcaaagattgacgat 34068716  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||| |||||||| |||||||||| |||||||    
T  34068715 tcaaatcaattaatggtttgatattcgaaaatcacgagcacac 34068673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 20364679 - 20364529
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    |||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  20364679 agcacatttccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 20364580  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  20364579 attgacgattcagatcaattaatggtttgatatccgaaaatcacgagcaca 20364529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 25493324 - 25493474
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| ||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25493324 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 25493423  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25493424 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25493474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 20920942 - 20921089
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||    
T  20920942 agcaccttcccttcgcgtaaccaacccccaaatccaaaatcttaagggtttttactcattgttttccttcccacgaataaaaattgagagttcaaagatt 20921041  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20921042 gacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 20921089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 25496057 - 25496208
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| ||||||||||||||||||||||||||||   | | ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25496057 agcaccttccctttgcgtaaccaacccccgaatccaaagtctcgatgaaggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 25496156  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25496157 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacac 25496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 29855450 - 29855601
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  29855450 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttaccttcccaagaataaaaatcgagagttcaaag 29855549  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  29855550 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacac 29855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 17685085 - 17684935
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17685085 agcaccttcccttcatgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 17684986  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  17684985 attgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 17684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 24293652 - 24293802
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24293652 agcaccttccctgcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 24293751  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||| ||||||    
T  24293752 attgacgatttaaatcaattaatggtttgagatccgaaaatcacgagcaca 24293802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 34527996 - 34527846
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34527996 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 34527897  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34527896 atcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 34527846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 34541970 - 34541820
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34541970 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 34541871  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34541870 atcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 34541820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 41232465 - 41232315
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41232465 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 41232366  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| |||||||||| |||||||| ||||||    
T  41232365 atttacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 41232315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 35304808 - 35304954
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  35304808 agcaccttcccttcgcgtaaccaacccccgaatccaaagacttaggggtttttactcattttttcccttcccacaaataaaaatcg--agttcaaagatt 35304905  T
Q  123 gacgattc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  35304906 gacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 35304954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26717650 - 26717500
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaa---gggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  26717650 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttgatgagggtttttactcattttttcccttcccacgaataaaaataaagagttcaaag 26717551  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  26717550 attaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 26717500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 35040168 - 35040314
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattga 124  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35040168 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattga 35040267  T
Q  125 cgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    || |||||||||||||||  ||||||||||||||||||| |||||||    
T  35040268 cggttcaaatcaattaattgtttgatatccgaaaatcacgagcacac 35040314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 14630522 - 14630662
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  14630522 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 14630619  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||||||||||||||||||| ||||||    
T  14630620 tcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 14630662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 34437197 - 34437349
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| ||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  34437197 agcaccttcccttcgcataatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 34437296  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||||    
T  34437297 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacact 34437349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 44375262 - 44375413
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  44375262 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaa 44375361  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  44375362 gattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 44375413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 44390843 - 44390994
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  44390843 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaa 44390942  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  44390943 gattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 44390994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 2653139 - 2653289
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  2653139 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 2653238  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  2653239 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 2653289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 3755035 - 3754885
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3755035 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 3754936  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  3754935 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 3754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26896678 - 26896528
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||| || |||||||||    
T  26896678 agcaccttcccttcgcgtaatcaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacaaataaaaattgagagttcaaag 26896579  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| |||| |||||||| ||||||    
T  26896578 attgacgattcaaatcaattaatggtttgacatccaaaaatcacgagcaca 26896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 30683248 - 30683105
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacg 126  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  30683248 ttcccttcgcgtaaccaacccccgaatccaaagtctcgaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatcgacg 30683149  T
Q  127 attcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||| ||||| ||||||||||| | ||||||    
T  30683148 attcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 30683105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 42564526 - 42564376
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42564526 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 42564427  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  42564426 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 42564376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 42573150 - 42573000
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42573150 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 42573051  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  42573050 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 42573000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 21320760 - 21320618
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  21320760 ttcccttcgcgtaaccaacccctgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaataaaaattgagagttcaaagattgacgat 21320662  T
Q  129 tc-aaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||| |||| ||||||||||||||||||| ||||||    
T  21320661 tcaaaatcaattaaatggtttgatatccgaaaatcacgagcaca 21320618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 30524668 - 30524527
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  30524668 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcaataagggtttttactcattttgtcccttcccacgaataaaaattgagagttcaaag 30524569  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||| |||| | |||||||||||||||    
T  30524568 attgacgattcaaatcaatcaatggtctgatatccgaaaatc 30524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 33306705 - 33306564
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33306705 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 33306606  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||||||||||||| ||||| |||| ||||||    
T  33306605 attgacgattcaaatcaattaatggtttgacatccaaaaatc 33306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 11622173 - 11622049
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  11622173 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 11622074  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  11622073 ttaatggtttgatatccgaaaatca 11622049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 42386245 - 42386377
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42386245 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 42386344  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  42386345 ttaatggtttgatatccgaaaatcgcgagcaca 42386377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 42401129 - 42401261
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42401129 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 42401228  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||||||||||||||| | ||||||    
T  42401229 ttaatggtttgatatccgaaaatcgcgagcaca 42401261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 42247625 - 42247482
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  42247625 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaatcgagaattcaaa 42247526  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  42247525 gattgaagattcaaatcaattaatggtttgatatccgaaaatca 42247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 3765086 - 3764936
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3765086 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 3764987  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||| | ||||||||||| | ||||||    
T  3764986 atcgacgattcaaatcaattaatggtttaacatccgaaaatcgcgagcaca 3764936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 15600841 - 15600991
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||    || ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15600841 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgaaaaaggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 15600940  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  15600941 attgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 15600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 10681456 - 10681324
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  10681456 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 10681357  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  10681356 ttaatggtttgacatccgaaaatcgcgagcaca 10681324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 24287084 - 24287231
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||| |||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  24287084 agcaccttccctgcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttt-tcccttctcacgaataaaaatcgagagttcaaag 24287182  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagca 168  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  24287183 attgacgatttaaatcaattaatggtttgagatccgaaaatcacgagca 24287231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16274900 - 16275023
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16274900 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16274999  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| ||||| |||||||||||    
T  16275000 ttaatgatttgacatccgaaaatc 16275023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 16284076 - 16284199
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16284076 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 16284175  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |||||| ||||| |||||||||||    
T  16284176 ttaatggtttgacatccgaaaatc 16284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 27681055 - 27680932
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  27681055 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 27680956  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  27680955 tcaatggtttgatatccgaaaatc 27680932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 21111468 - 21111605
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| |||||||||||||||||||| | |||| ||||||||  |||||||||||||| ||||||||||||||||||||||| | || ||||||||||||    
T  21111468 agcaccttcccttcgcgtaaccaacctctgaattcaaagtct--agggtttttactcactttttcccttcccacgaataaaagttgagagttcaaagatt 21111565  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21111566 gacgattcaaatcaattaatggtttgatatccgaaaatca 21111605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 21850254 - 21850121
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  21850254 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagatcgacgattcaaatcaa 21850155  T
Q  138 ttaatgctttgatatccgaaaatcacaagcacac 171  Q
     ||||| ||||| ||||||||||| | |||||||    
T  21850154 ataatggtttgacatccgaaaatcgcgagcacac 21850121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 31354844 - 31354719
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  31354844 aaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 31354745  T
Q  137 attaatgctttgatatccgaaaatca 162  Q
    ||||||| ||||| ||||||||||||    
T  31354744 attaatggtttgacatccgaaaatca 31354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 21858689 - 21858557
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  21858689 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagatcgacgattcaaatcaa 21858590  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
     ||||| ||||| ||||||||||| | ||||||    
T  21858589 ataatggtttgacatccgaaaatcgcgagcaca 21858557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 22187461 - 22187585
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  22187461 aaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 22187560  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  22187561 atcaatggtttgatatccgaaaatc 22187585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 34708248 - 34708380
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  34708248 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatcgacgattcaaatcaa 34708347  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  34708348 ttaatggtttgacatccgaaaatcgcgagcaca 34708380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 42245675 - 42245798
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  42245675 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaagatcgagagttcaaagattgacgattcaaatcaa 42245774  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |  ||| |||||||||||||||||    
T  42245775 tcgatggtttgatatccgaaaatc 42245798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 34685826 - 34685959
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  34685826 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatcgacgattcaaatcaa 34685925  T
Q  138 tt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    || |||| ||||| ||||||||||| | ||||||    
T  34685926 ttaaatggtttgacatccgaaaatcgcgagcaca 34685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 39842158 - 39842078
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaa 103  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39842158 agcaccttcccttcgcgtaaccaacccccgaatccaaattcttaagggtttttactcattttttcccttcccaagaataaa 39842078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 23284032 - 23283970
Alignment:
Q  97 gaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaa 159  Q
    |||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  23284032 gaataaaaattgagagttcaaagattgacgattcaaatcaatcaatggtttgatatccgaaaa 23283970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 64086 - 63938
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  64086 agcaccttcctttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaagat 63987  T
Q  122 tgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  63986 tgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 63938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 80488 - 80338
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  80488 agcacgttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 80389  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  80388 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 80338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 7e-62; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 31423975 - 31424125
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31423975 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 31424074  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31424075 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31424125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 29190338 - 29190478
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  29190338 ttcccttcgcgtaaccaacccccgaatccaaagtcttgagggtttttactcatttt-tcccttcccacgaataaaaatcgagagttcaaagattgacgat 29190436  T
Q  129 tcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  29190437 tcaaatcaattaatggtttgatatccgaaaatcacgagcaca 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 43596656 - 43596506
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43596656 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 43596557  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  43596556 attaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 43596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 43629450 - 43629300
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43629450 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 43629351  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  43629350 attaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 43629300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 19226088 - 19226226
Alignment:
Q  31 cccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattc 130  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  19226088 cccttcgcgtaaccaacccccgaatccaaagtct-aagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgacgattt 19226186  T
Q  131 aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  19226187 aaatcaattaatggtttgatatccgaaaatcacgagcaca 19226226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 24955444 - 24955292
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24955444 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 24955345  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  24955344 attgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcacact 24955292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 21931616 - 21931765
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21931616 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 21931715  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  21931716 attgacgattcaaatcaattaatggtttgat-tccgaaaatcacgagcaca 21931765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 24963904 - 24963754
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24963904 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 24963805  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  24963804 attgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 24963754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26088486 - 26088336
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  26088486 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 26088387  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  26088386 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 26088336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 31413069 - 31413219
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  31413069 agcaccttcccttcgcgtaaccgacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaag 31413168  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31413169 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 20396417 - 20396266
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  20396417 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttcactcatttttttcccttcccacgaataaaaatcgagagttcaaa 20396318  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20396317 gattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 20396266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 23348692 - 23348541
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23348692 agcaccttcccttcgcgtaaccaaccctcgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgatagttcaaag 23348593  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||| |||||||||||||||||||| |||||||||||||| |||| |||||||    
T  23348592 attaacgattcaaatcaattaatggtttgatatccgaaattcacgagcacac 23348541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 1726769 - 1726619
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1726769 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 1726670  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| ||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  1726669 attaacgattcaaatcagttaatggtttgatatccgaaaatcacgagcaca 1726619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 26078507 - 26078357
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  26078507 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttcactcattttttcccttcccaagaataaaaatcgagagttcaaag 26078408  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  26078407 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 26078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 11802497 - 11802347
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11802497 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 11802398  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  11802397 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 11802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 11812573 - 11812423
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11812573 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 11812474  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  11812473 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 11812423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 12170279 - 12170129
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  12170279 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 12170180  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  12170179 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 12170129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 12179708 - 12179558
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  12179708 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 12179609  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  12179608 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 12179558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 41093692 - 41093556
Alignment:
Q  31 cccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt--cccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  41093692 cccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttttcccttcccacgaataaaaatcgagagttcaaagattgac 41093593  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||| ||||||||||||||||||    
T  41093592 gattcaaatcaattaatggtttgatatccgaaaatca 41093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 28854012 - 28854164
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28854012 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 28854111  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  28854112 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcacact 28854164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 3476915 - 3476764
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3476915 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 3476816  T
Q  120 attgacgattcaaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  3476815 attgacgattcaaatcaattaaatggtttgatatccgaaaatcgcgagcaca 3476764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 3491685 - 3491534
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3491685 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 3491586  T
Q  120 attgacgattcaaatcaatt-aatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  3491585 attgacgattcaaatcaattaaatggtttgatatccgaaaatcgcgagcaca 3491534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 28845402 - 28845552
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||| || |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28845402 agcaccttccctttgcataaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 28845501  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  28845502 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 28845552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 36458831 - 36458981
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36458831 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 36458930  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  36458931 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 36458981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 33843979 - 33843838
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33843979 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 33843880  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  33843879 attgacgattcaaatcaattaatggtttgatatccaaaaatc 33843838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 345020 - 344880
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  345020 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 344923  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||||| ||||||||||||| ||||||    
T  344922 tcaaaatcaattaatggtttgacatccgaaaatcacgagcaca 344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 359659 - 359519
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  359659 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttccc-tcccacgaat-aaaattgagagttcaaagattgacgat 359562  T
Q  129 tc-aaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||| ||||| ||||||||||||| ||||||    
T  359561 tcaaaatcaattaatggtttgacatccgaaaatcacgagcaca 359519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 20370718 - 20370578
Alignment:
Q  34 ttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaagattgacgatt 129  Q
    |||||||||||||||||||||||||||||||   |||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  20370718 ttcgcgtaaccaacccccgaatccaaagtctcgataagggttttcactcatttttttcccttcccatgaataaaaatcgagagttcaaagattgacgatt 20370619  T
Q  130 caaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  20370618 caaatcaattaatggtttgatatccgaaaatcacgagcaca 20370578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 21856929 - 21856805
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  21856929 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 21856830  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  21856829 ttaatggtttgatatccgaaaatca 21856805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 33835280 - 33835130
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||| ||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33835280 agcaccttcctttcgcataaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 33835181  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  33835180 attgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 33835130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17642691 - 17642815
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  17642691 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttccattcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 17642790  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||| ||||||||||||||||||    
T  17642791 ttaatggtttgatatccgaaaatca 17642815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 27220273 - 27220141
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  27220273 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 27220174  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  27220173 ttaatggtttgacatccgaaaatcgcgagcaca 27220141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 27223280 - 27223148
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  27223280 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 27223181  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  27223180 ttaatggtttgacatccgaaaatcgcgagcaca 27223148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 27232751 - 27232619
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  27232751 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagattgacgattcaaatcaa 27232652  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  27232651 ttaatggtttgacatccgaaaatcgcgagcaca 27232619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 23827878 - 23827754
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23827878 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 23827779  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  23827778 ttaaatggtttgatatccgaaaatc 23827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 21986298 - 21986174
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  21986298 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 21986199  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| ||||| |||||||||||    
T  21986198 ttaaatggtttgacatccgaaaatc 21986174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 23039321 - 23039445
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  23039321 aaccaacccccgaattcaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaaattgacgattcaaatcaa 23039420  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    |||||  ||||||||||||||||||    
T  23039421 ttaatagtttgatatccgaaaatca 23039445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 23637554 - 23637678
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23637554 aaccaacccccgaatccaaagtctcgataagggtttctactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 23637653  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  23637654 ttaaatggtttgatatccgaaaatc 23637678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 23835336 - 23835212
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23835336 aaccaacccccgaatccaaagtctcgataagggtttctactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 23835237  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  23835236 ttaaatggtttgatatccgaaaatc 23835212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 27064296 - 27064428
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  27064296 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaagatcgacgattcaaatcaa 27064395  T
Q  138 ttaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||| ||||| ||||||||||| | ||||||    
T  27064396 ttaatggtttgacatccgaaaatcgcgagcaca 27064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 21994946 - 21994822
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  21994946 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaaaattgacgattcaaatcaa 21994847  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| ||||| |||||||||||    
T  21994846 ttaaatggtttgacatccgaaaatc 21994822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 20377962 - 20378111
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    ||||||||||||||||||||||| |||||| |||||||||| || |||||||||    
T  20377962 agcaccttcccttcgcataaccaaccctcgaatccaaagtctcgaaaagggtttttactcattttttcc-ttcccaagaataaaaattgagagttcaaag 20378060  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  20378061 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 20378111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 20386751 - 20386900
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    ||||||||||||||||||||||| |||||| |||||||||| || |||||||||    
T  20386751 agcaccttcccttcgcataaccaaccctcgaatccaaagtctcgaaaagggtttttactcattttttcc-ttcccaagaataaaaattgagagttcaaag 20386849  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  20386850 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 20386900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 21850768 - 21850650
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  21850768 aaccaacccccgaatccaaagtctcgataagggtttttactttttttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaa 21850669  T
Q  138 ttaatgctttgatatccga 156  Q
    |||||| ||||||||||||    
T  21850668 ttaatggtttgatatccga 21850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 21858682 - 21858564
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  21858682 aaccaacccccgaatccaaagtctcgataagggtttttactttttttttcccttcccatgaataaaaattgagagttcaaagattgacgattcaaatcaa 21858583  T
Q  138 ttaatgctttgatatccga 156  Q
    |||||| ||||||||||||    
T  21858582 ttaatggtttgatatccga 21858564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 31548176 - 31548052
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||    
T  31548176 aaccaacccccgaatccaaagtctcgataagggttttttactcattttttccctgcccacaaataaaaattgagagttcaaagattgacgattcaaatca 31548077  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  31548076 atcaatggtttgatatccgaaaatc 31548052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 26177302 - 26177419
Alignment:
Q  48 ccccgaatccaaagtct---taagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatg 143  Q
    |||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || |    
T  26177302 ccccgaatccaaagtctcgataagggttttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaatcaagg 26177401  T
Q  144 ctttgatatccgaaaatc 161  Q
     |||||||||||||||||    
T  26177402 gtttgatatccgaaaatc 26177419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 23985003 - 23985093
Alignment:
Q  71 tttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23985003 tttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 23985093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 23762412 - 23762288
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||| |||||||||   |||||||||| ||||||||||  ||| |||||||||||||| || ||||||||||||| |||||||||||||    
T  23762412 aaccaacccccgaatacaaagtcttgataagggttttttctcattttttatctttccacgaataaaaatagagagttcaaagattgtcgattcaaatcaa 23762313  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| ||| |||||||||||||    
T  23762312 ttaaatggttttatatccgaaaatc 23762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 29922 - 29775
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  29922 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaaggatttttactcattttttcccttcccacgaataaaaatagagagttcaaagatt 29823  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  29822 gacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 29775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 32772 - 32642
Alignment:
Q  40 taaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaatt 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||     
T  32772 taaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttccaacgaataaaaatcgagagttcaaagattgacgattcaaatcaata 32673  T
Q  140 aatgctttgatatccgaaaatcacaagcaca 170  Q
    |||| ||||||||||||||||| | ||||||    
T  32672 aatggtttgatatccgaaaatcgcgagcaca 32642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 16545 - 16395
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16545 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 16446  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16445 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 109606 - 109754
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt--aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| ||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  109606 agcaccttcccttcgcgtaaccaacccacgaatccaaagtctcgaaagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaaga 109705  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcac 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  109706 ttgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 109754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 4609 - 4759
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  4609 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcatttttttccttcccatgaataaaaatcgagagttcaaag 4708  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4709 attgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 172581 - 172731
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  172581 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 172680  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  172681 attgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 172731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 13779 - 13635
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  13779 ttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattaac 13680  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  13679 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 29719 - 29569
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29719 agcaccttcccttcgcgtaaccaacccccaaatccaaagtcttgataagggtttttactcattttttcccttcccacgaataaaaatcgagagttcaaag 29620  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  29619 attaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 29569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 10395 - 10547
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10395 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgatgagggtttttactcatttttttccttcccacgaataaaaatcgagagttcaaag 10494  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10495 atcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacact 10547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 22080 - 21929
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggttttt-actcattttttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  22080 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggttttttactcattttttcccttcccaagaataaaaatcgagagttcaaa 21981  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  21980 gattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 21929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 21601 - 21459
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  21601 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgataaggttttttactcatttttttccttcccacgaataaaaatcgagagttcaaag 21502  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  21501 attgacgattcaaatcaattaatggtttgatatctgaaaatca 21459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 63441 - 63581
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct-taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagat 121  Q
    ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  63441 agcaccttcccttcgcataaccaacccccgaatccaaagtcgataagggtttttactcatattttcccttcccaagaataaaaatcgagagttcaaagat 63540  T
Q  122 tgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  63541 tgacgattcaaatcaattaatggtttgatatccgaaaatca 63581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 46599 - 46459
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |||    
T  46599 agcaccttcccttcgcgtaaccaacccccgaatccaaagtcttaaggatttttactcattttttcgcttcccacgaataaaaatcgatagttcaaatatt 46500  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcac 163  Q
    ||||||| ||||||| ||||| ||| |||||||||||||||    
T  46499 gacgatttaaatcaaataatggtttaatatccgaaaatcac 46459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 4480 - 4630
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  4480 agcaccttcccttcgtgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcga--gttcaaag 4577  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||    
T  4578 attgacgactcaaatcaattaatggtttgatatccgaatatcacgagcacact 4630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 30144 - 30286
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgac 125  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||    
T  30144 ttcccttcgcgtaaccaacccccgaatccaaagtctcgataagggtttttactcattttttctcttcccacgaataaaaatcga--gttcaaagattaac 30241  T
Q  126 gattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  30242 gattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 11481 - 11584
Alignment:
Q  67 agggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaag 166  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  11481 agggtttttactcattttttcccttcccacgaataaaaatcgagtgttcagagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgag 11580  T
Q  167 caca 170  Q
    ||||    
T  11581 caca 11584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1804 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold1804
Description:

Target: scaffold1804; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 208 - 360
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttt-ttcccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  208 agcaccttcccttcgcgtaaccaacccccgaatccaaagtctcgatgagggtttttactcatttttttcccttcccacgaataaaaatcaagagttcaaa 307  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  308 gattgacgattcaaatcaattaatggtttaatatccgaaaatcacgagcacac 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 15524 - 15382
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaa 118  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  15524 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcatttttttcccttcccacgaataaaaatcgagagttcaaa 15425  T
Q  119 gattgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  15424 gattgacgattcaaatcaattaatggtttgacatccgaaaatc 15382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 15086 - 15227
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15086 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaag 15185  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    || ||||||||||||||||||||| ||||| |||||||||||    
T  15186 atcgacgattcaaatcaattaatggtttgacatccgaaaatc 15227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 10635 - 10782
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagatt 122  Q
    ||||| ||||||||||||||| |||||||||||  |||| |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||    
T  10635 agcaccttcccttcgcgtaacgaacccccgaatataaaggcttaagggtttttattcattttctccctttccacgaataaaaatcgagagttcaaagatt 10734  T
Q  123 gacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
     |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  10735 aacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 2359 - 2219
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaa--agtcttaagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaaga 120  Q
    ||||| |||||||||||||||||||||||||||||||    | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2359 agcaccttcccttcgcgtaaccaacccccgaatccaattttttttaagggtttttactcattttttcccttcccaagaataaaaatcgagagttcaaaga 2260  T
Q  121 ttgacgattcaaatcaattaatgctttgatatccgaaaatc 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  2259 ttgacgattcaaatcaattaatggtttgacatccgaaaatc 2219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 4749 - 4899
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaag 119  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  4749 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggattttactcattttttcccttcccaagaataaaaatcgagagttcaaag 4848  T
Q  120 attgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    || ||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  4849 atcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 63372 - 63487
Alignment:
Q  29 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggtttt-tactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacga 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  63372 ttcccttcgcgtaaccaacccccgaatccaaagtcttaagggttttttactcattttttcccttcccacgaataaaaatcgagagttcaaagattgacga 63471  T
Q  128 ttcaaatcaattaatg 143  Q
    | |||||| |||||||    
T  63472 tccaaatcgattaatg 63487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 55786 - 55910
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  55786 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 55885  T
Q  138 ttaatgctttgatatccgaaaatca 162  Q
    | |||  ||||||||||||||||||    
T  55886 tcaattgtttgatatccgaaaatca 55910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 83660 - 83783
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  83660 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaatgaaaattgagagttcaaagattgacgattcaaatcaa 83759  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    | |||| |||||||||||||||||    
T  83760 tcaatggtttgatatccgaaaatc 83783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 3696 - 3579
Alignment:
Q  48 ccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgc 144  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||     
T  3696 ccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgatttaaatcaattaatgg 3597  T
Q  145 tttgatatccgaaaatca 162  Q
    ||||||||||||||||||    
T  3596 tttgatatccgaaaatca 3579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0945 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 56 - 180
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaa-aatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  56 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaagaattgagagttcaaagattgacgattcaaatca 155  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    || |||| |||||||||||||||||    
T  156 atcaatggtttgatatccgaaaatc 180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 7868 - 7744
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcatttttt-cccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatca 136  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  7868 aaccaacccccgaatccaaagtctcgataagggtttttactcttttttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatca 7769  T
Q  137 attaatgctttgatatccgaaaatc 161  Q
    ||||||| |||||||||||||||||    
T  7768 attaatggtttgatatccgaaaatc 7744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 75 - 199
Alignment:
Q  41 aaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  75 aaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaa 174  T
Q  138 tt-aatgctttgatatccgaaaatc 161  Q
    || |||| ||||| |||||||||||    
T  175 ttaaatggtttgacatccgaaaatc 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 8529 - 8432
Alignment:
Q  65 taagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatca 162  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8529 taagggtttttactcattttttcccttcccacgaataaaaattgagagttcaaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 8432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 22840 - 22717
Alignment:
Q  41 aaccaacccccgaatccaaagtctt---aagggtttttactcattttttcccttcccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaa 137  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  22840 aaccaacccccgaatccaaagtctcgaaaagggtttttactcattttttcccttcccaagaataaagatcgagagttcaaagattgacgattcaaatcaa 22741  T
Q  138 ttaatgctttgatatccgaaaatc 161  Q
    |  ||| |||||||||||||||||    
T  22740 tcgatggtttgatatccgaaaatc 22717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 90 - 1
Alignment:
Q  23 agcacattcccttcgcgtaaccaacccccgaatccaaagtct---taagggtttttactcattttttcccttcccacgaataaaaatcga 109  Q
    ||||| |||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  90 agcaccttcccttcgcataaccaacccccgaatccaaagtctcgataagggtttttactcattttttcccttcccacgaataaaaatcga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 423 - 346
Alignment:
Q  93 ccacgaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  423 ccacgaataaaaatcgagagttcaaagattgacgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 1 - 76
Alignment:
Q  97 gaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacact 172  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||||||||    
T  1 gaataaaaatcgagagttcaaagattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcacact 76  T

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Target: scaffold0386 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 1 - 75
Alignment:
Q  97 gaataaaaatcgaaagttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcacac 171  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| || |||||||||||||| | |||||||    
T  1 gaataaaaatcgagagttcaaagattgacgattcaaatcaataaatggttggatatccgaaaatcgcgagcacac 75  T

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Target: scaffold0599 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 10007 - 9948
Alignment:
Q  111 agttcaaagattgacgattcaaatcaattaatgctttgatatccgaaaatcacaagcaca 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  10007 agttcaaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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