View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11980_low_70 (Length: 295)
Name: NF11980_low_70
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11980_low_70 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 36217156 - 36216892
Alignment:
| Q |
13 |
gaggagcagagagactatgtaatggacgtggaaaatgttcgtattgaagtggaaagcatttaccatagaaagctggaaaaccagtgatatgtgatcagga |
112 |
Q |
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| T |
36217156 |
gaggatcagagagactatgtaatggacgtggaaaatgttcgtattgaagtggaaagcatttaccatagaaagctggaaaaccagtgatatgtgatcagga |
36217057 |
T |
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| Q |
113 |
gttgacatccttagattatggtgtcttagattacggtgttgaccctgtatcatcatctagattttataggatacgtttctcacaattttgatggtgttat |
212 |
Q |
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| T |
36217056 |
gttgacatccttagattatggtgtcttagattacggtgttgaccctgtatcatcatctagattttataggatacgtttctcacaattttgatggtgttat |
36216957 |
T |
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| Q |
213 |
tgacatttgagaaccaacatttggggtattaataccaattaattttatagttgtacagttaatac |
277 |
Q |
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| T |
36216956 |
tgacatttgagaaccaacatttggggtattaataccaattaattttatagttgtacagttaatac |
36216892 |
T |
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