View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11980_low_95 (Length: 247)
Name: NF11980_low_95
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11980_low_95 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 24636652 - 24636884
Alignment:
| Q |
1 |
gtctttattttattatttttaccatgctaactaattgtacggatgtaattttccttttgttggaaaataagtttgtttctctccttccatat--ataaac |
98 |
Q |
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| T |
24636652 |
gtctttattttattatttttaccatgctaactaattgaacggatgtaattttccttttgttggaaaataagtttgtttctctccttccatatatataaac |
24636751 |
T |
|
| Q |
99 |
acttgttaaccaaattattttgagtgctaaatttaatttatttgaaaaacctttcaaatcacaatgtaaagagttgaaattatggactgcccagcattca |
198 |
Q |
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| T |
24636752 |
agttgttaaccaaattattttgagtgctaaatttaatttatttgaaaaacctttcaaatcacaatgtaaagagttgaaattatggactgcccagtattca |
24636851 |
T |
|
| Q |
199 |
ttcacacatcagaatgatgcctgatctaagttt |
231 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
24636852 |
ttcacacatcagaatgatgcctgatctaagttt |
24636884 |
T |
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