View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11982A_low_191 (Length: 284)
Name: NF11982A_low_191
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982A_low_191 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 284
Target Start/End: Original strand, 21831747 - 21832021
Alignment:
| Q |
7 |
cttggtatccaagtgccctcctcgaaagcgatcgtggtatttgatcactccattaataccatgtttgagatctaatgtcctcattgatgtttttatcggt |
106 |
Q |
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| T |
21831747 |
cttggtatccaagtgccctcctcgaaagccatcgtggtatttgatcactccattaataccatgtttgagatctaatgtcctcattgatgtttttatcggt |
21831846 |
T |
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| Q |
107 |
ctacaaagnnnnnnnnnnnnnnnngcttattttaaatgtattttcaggttatttcaagttcgaactccatgtggttgatgagatctctataagatgaact |
206 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21831847 |
ctacaaagttttttttttttt---gcttattttaaatgtattttcaggttatttcaagttcgaactccatgtggttgatgagatctctataagatgaact |
21831943 |
T |
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| Q |
207 |
tgttttgttgataccatatttgatgtaagagacgaatgctgattatcatgaaattatgcatcctattagtattattta |
284 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21831944 |
tgttttgttgataccatatttggtgtaagagacgaatgctgattatcatgaaattatgcatcctattagtatcattta |
21832021 |
T |
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