View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11982A_low_253 (Length: 264)
Name: NF11982A_low_253
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982A_low_253 |
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Alignment Details
Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 40810353 - 40810211
Alignment:
| Q |
107 |
ccttccacttgtttccctcattttcagctttgtcaggttaatctca------tacactagaatacaaaatacaaagacagcatcatcaccaaagcactag |
200 |
Q |
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| T |
40810353 |
ccttccacttgtttccctcattttcagctttgtcagattaatctcaatctgatacactagaatacaaaatacaaagacagcatcatcaccaaagcactag |
40810254 |
T |
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| Q |
201 |
aaaatctctgtttgttcaaaactaaaacccaaaaagcgctttt |
243 |
Q |
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|||||| |||||||||||||||| ||| |||||||||| |||| |
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| T |
40810253 |
aaaatccctgtttgttcaaaactcaaaaccaaaaagcgatttt |
40810211 |
T |
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