View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11982A_low_282 (Length: 253)
Name: NF11982A_low_282
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982A_low_282 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 39433290 - 39433052
Alignment:
| Q |
7 |
gttttttaactgataaattagtgatcaaccagctatttataaacttgtgtcttaagaaacaatatttcatgaaaagaaacatcattttattctcttttaa |
106 |
Q |
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| T |
39433290 |
gttttttaactgataaattagtgatcaaccagctatttataaacttgtgtcttaagaaacaatatttcatgaaaagaaacatcattttattctcttttaa |
39433191 |
T |
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| Q |
107 |
aattatgctattaacaagagccaccttattaataaaaagtgactttaaagtctcaaatgacagagttaaacaatatagaacaaccaaacctattgatttt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39433190 |
aattatgctattaacaagagccaccttattaataaaaagtgactttaaagtctcaaatgacagagttaaacaatatagaacaaccaaacctattgatttt |
39433091 |
T |
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| Q |
207 |
ccaatgtaattaattttattatatatgcatatattcttc |
245 |
Q |
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| T |
39433090 |
ccaatgtaattaattttattatatgtgcatatattcttc |
39433052 |
T |
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