View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11982A_low_307 (Length: 250)
Name: NF11982A_low_307
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982A_low_307 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 5750389 - 5750171
Alignment:
| Q |
17 |
tacgttaattgaccaatttaatttagagtcttcaagttcaaattagttgatttttgtgacctcttggttaatttactcatgtaataatcttggttttatt |
116 |
Q |
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| T |
5750389 |
tacgttaattgacaaatttaatttagagtcttcaagttcaaattagttgatttttgtgacctcttggttaatttactcatgtaataatcttggttttatt |
5750290 |
T |
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| Q |
117 |
atcttcgtttgttttggttagctatgttaaatactttattcttcaattttaggtgttgtgtgtatatgcatgtgcaaatggtagtatggtatatattaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5750289 |
atcttcgtttgttttggttagctatgttaaatactttattcttcaattttaggtgttgtgtgtatatgcatgtgcaaatggtagtatggtatatattaat |
5750190 |
T |
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| Q |
217 |
tgagtccaccttgatttat |
235 |
Q |
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||||||||||||||||||| |
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| T |
5750189 |
tgagtccaccttgatttat |
5750171 |
T |
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