View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11982A_low_393 (Length: 239)

Name: NF11982A_low_393
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11982A_low_393
NF11982A_low_393
[»] chr3 (49 HSPs)
chr3 (15-224)||(1740754-1740963)
chr3 (16-221)||(795052-795254)
chr3 (135-226)||(26928847-26928938)
chr3 (88-221)||(21494027-21494160)
chr3 (141-218)||(39775162-39775239)
chr3 (86-219)||(6025407-6025542)
chr3 (134-221)||(14425294-14425381)
chr3 (141-218)||(3034202-3034279)
chr3 (141-218)||(3693177-3693254)
chr3 (144-221)||(8223491-8223568)
chr3 (141-218)||(8883729-8883806)
chr3 (141-218)||(8888489-8888566)
chr3 (141-218)||(14438134-14438211)
chr3 (141-218)||(18467796-18467873)
chr3 (141-218)||(32473458-32473535)
chr3 (141-221)||(16749378-16749458)
chr3 (141-221)||(18350233-18350313)
chr3 (141-221)||(19776441-19776521)
chr3 (140-218)||(10585647-10585725)
chr3 (141-218)||(3673145-3673222)
chr3 (141-218)||(8070238-8070315)
chr3 (144-221)||(8197008-8197085)
chr3 (141-218)||(18472590-18472667)
chr3 (91-220)||(26707018-26707147)
chr3 (141-221)||(4106784-4106864)
chr3 (141-221)||(4110636-4110716)
chr3 (141-221)||(9707049-9707129)
chr3 (141-221)||(14671949-14672029)
chr3 (141-221)||(15965611-15965691)
chr3 (141-221)||(15969535-15969615)
chr3 (141-221)||(15973459-15973539)
chr3 (144-219)||(37439021-37439096)
chr3 (86-226)||(20810614-20810751)
chr3 (141-213)||(29792-29864)
chr3 (141-221)||(8488848-8488928)
chr3 (141-221)||(18699236-18699316)
chr3 (141-221)||(22758638-22758718)
chr3 (82-219)||(25023633-25023768)
chr3 (86-189)||(26962334-26962437)
chr3 (86-226)||(38436674-38436811)
chr3 (140-218)||(45904002-45904080)
chr3 (155-218)||(53358660-53358724)
chr3 (162-221)||(43888580-43888639)
chr3 (134-220)||(1688651-1688737)
chr3 (134-226)||(53119770-53119859)
chr3 (147-188)||(6595857-6595898)
chr3 (172-213)||(47408645-47408686)
chr3 (168-220)||(27604946-27604998)
chr3 (141-221)||(51922890-51922970)
[»] chr8 (25 HSPs)
chr8 (16-219)||(33848254-33848457)
chr8 (142-218)||(4237800-4237876)
chr8 (142-218)||(4242539-4242615)
chr8 (141-221)||(21384300-21384380)
chr8 (141-221)||(21387720-21387800)
chr8 (141-221)||(21411579-21411659)
chr8 (141-221)||(21806071-21806151)
chr8 (141-221)||(23915048-23915128)
chr8 (140-208)||(25367443-25367511)
chr8 (134-221)||(22104231-22104318)
chr8 (140-218)||(8330820-8330898)
chr8 (140-218)||(34818163-34818241)
chr8 (145-218)||(43302146-43302219)
chr8 (141-221)||(4582754-4582834)
chr8 (141-221)||(18862028-18862108)
chr8 (141-221)||(21827397-21827477)
chr8 (140-218)||(37772265-37772344)
chr8 (141-221)||(16066675-16066758)
chr8 (144-221)||(19393192-19393269)
chr8 (141-218)||(31449323-31449400)
chr8 (86-226)||(31030771-31030908)
chr8 (141-221)||(25733623-25733703)
chr8 (86-219)||(19566410-19566540)
chr8 (86-226)||(33616442-33616579)
chr8 (86-219)||(19430261-19430391)
[»] chr6 (30 HSPs)
chr6 (86-226)||(3902513-3902652)
chr6 (86-221)||(11956419-11956554)
chr6 (88-226)||(3902155-3902292)
chr6 (89-220)||(5600690-5600821)
chr6 (88-226)||(29325778-29325915)
chr6 (141-218)||(17963993-17964070)
chr6 (141-221)||(19772470-19772550)
chr6 (141-221)||(27324517-27324597)
chr6 (144-221)||(14073691-14073768)
chr6 (144-221)||(26981151-26981228)
chr6 (141-221)||(2077368-2077448)
chr6 (141-221)||(15704369-15704448)
chr6 (141-221)||(16624972-16625052)
chr6 (141-221)||(16760938-16761018)
chr6 (141-221)||(22806907-22806987)
chr6 (141-221)||(22949788-22949868)
chr6 (141-221)||(22953744-22953824)
chr6 (141-221)||(23872232-23872312)
chr6 (141-221)||(23876188-23876268)
chr6 (141-216)||(6112217-6112292)
chr6 (88-226)||(17281283-17281416)
chr6 (141-218)||(8748343-8748421)
chr6 (151-221)||(18387488-18387558)
chr6 (144-221)||(27073541-27073618)
chr6 (164-219)||(10642958-10643013)
chr6 (141-218)||(24588636-24588714)
chr6 (141-221)||(31477162-31477242)
chr6 (178-221)||(2699565-2699608)
chr6 (17-63)||(5600607-5600655)
chr6 (99-226)||(19478390-19478514)
[»] chr4 (36 HSPs)
chr4 (86-221)||(30564129-30564264)
chr4 (86-226)||(10318491-10318631)
chr4 (86-226)||(24490274-24490411)
chr4 (144-221)||(14899077-14899154)
chr4 (141-217)||(41817342-41817418)
chr4 (140-218)||(34560983-34561061)
chr4 (141-218)||(3997520-3997597)
chr4 (141-218)||(5270858-5270935)
chr4 (141-218)||(5927652-5927729)
chr4 (144-221)||(14868529-14868606)
chr4 (144-221)||(14877328-14877405)
chr4 (141-221)||(15011274-15011354)
chr4 (141-221)||(15225721-15225801)
chr4 (86-226)||(10120297-10120434)
chr4 (141-218)||(8660861-8660938)
chr4 (144-221)||(9185145-9185222)
chr4 (144-221)||(9191010-9191087)
chr4 (141-221)||(10713496-10713576)
chr4 (141-221)||(10927266-10927346)
chr4 (141-221)||(12488354-12488434)
chr4 (141-221)||(14953513-14953593)
chr4 (141-221)||(18023177-18023257)
chr4 (141-221)||(25690550-25690630)
chr4 (145-221)||(31728803-31728879)
chr4 (146-221)||(26034744-26034819)
chr4 (141-218)||(8694297-8694374)
chr4 (90-195)||(17359768-17359872)
chr4 (141-218)||(31766455-31766532)
chr4 (141-218)||(47575221-47575298)
chr4 (141-218)||(7902569-7902646)
chr4 (145-213)||(13521447-13521516)
chr4 (117-197)||(3258372-3258452)
chr4 (88-226)||(10120527-10120662)
chr4 (143-218)||(39320121-39320196)
chr4 (82-160)||(15451481-15451558)
chr4 (173-221)||(19102561-19102609)
[»] chr7 (31 HSPs)
chr7 (86-226)||(47761865-47762005)
chr7 (147-221)||(19096810-19096884)
chr7 (140-218)||(27256796-27256874)
chr7 (141-218)||(26341791-26341868)
chr7 (141-218)||(47102098-47102175)
chr7 (140-218)||(40864820-40864898)
chr7 (141-218)||(8076609-8076686)
chr7 (141-221)||(20488504-20488584)
chr7 (141-221)||(36477533-36477613)
chr7 (91-221)||(7874816-7874947)
chr7 (140-218)||(19640858-19640936)
chr7 (141-221)||(16459839-16459919)
chr7 (145-221)||(16580785-16580861)
chr7 (141-221)||(18426483-18426563)
chr7 (141-213)||(20485151-20485223)
chr7 (141-221)||(32302395-32302475)
chr7 (141-221)||(45169389-45169469)
chr7 (86-227)||(9973703-9973841)
chr7 (146-221)||(14259562-14259637)
chr7 (144-221)||(838893-838970)
chr7 (144-221)||(846069-846146)
chr7 (144-221)||(853446-853523)
chr7 (144-221)||(1204073-1204150)
chr7 (144-221)||(1211450-1211527)
chr7 (144-221)||(8954728-8954805)
chr7 (141-221)||(14928094-14928174)
chr7 (141-221)||(15351560-15351640)
chr7 (86-224)||(33226591-33226726)
chr7 (145-213)||(9650422-9650491)
chr7 (141-208)||(29727262-29727329)
chr7 (141-218)||(44509831-44509909)
[»] chr5 (27 HSPs)
chr5 (90-220)||(31986971-31987101)
chr5 (141-221)||(29167407-29167487)
chr5 (140-218)||(32461001-32461079)
chr5 (134-221)||(26869765-26869852)
chr5 (140-218)||(36941722-36941800)
chr5 (141-218)||(557255-557332)
chr5 (141-218)||(562027-562104)
chr5 (141-218)||(12044593-12044670)
chr5 (141-218)||(13300948-13301025)
chr5 (144-221)||(21826779-21826856)
chr5 (141-218)||(36936969-36937046)
chr5 (141-221)||(10754006-10754086)
chr5 (141-218)||(6154867-6154945)
chr5 (140-218)||(31732096-31732174)
chr5 (141-210)||(8770810-8770879)
chr5 (141-206)||(26667874-26667939)
chr5 (141-206)||(26939471-26939536)
chr5 (141-218)||(36430195-36430272)
chr5 (141-218)||(41997223-41997300)
chr5 (141-218)||(42001992-42002069)
chr5 (144-218)||(7452337-7452411)
chr5 (140-218)||(21323433-21323511)
chr5 (141-218)||(36424222-36424299)
chr5 (141-221)||(41096954-41097034)
chr5 (141-218)||(3666474-3666549)
chr5 (141-218)||(37549587-37549663)
chr5 (141-218)||(37652385-37652461)
[»] chr2 (28 HSPs)
chr2 (127-221)||(44683350-44683444)
chr2 (89-219)||(27556814-27556944)
chr2 (141-221)||(10160178-10160258)
chr2 (140-221)||(17968396-17968477)
chr2 (141-218)||(18344995-18345072)
chr2 (144-221)||(24286355-24286432)
chr2 (144-221)||(24292923-24293000)
chr2 (141-213)||(377748-377820)
chr2 (141-221)||(23068211-23068291)
chr2 (125-220)||(5771176-5771271)
chr2 (135-218)||(6297344-6297427)
chr2 (143-221)||(6856753-6856831)
chr2 (141-221)||(1284070-1284150)
chr2 (141-221)||(30344374-30344454)
chr2 (145-220)||(22844959-22845034)
chr2 (141-213)||(9785714-9785786)
chr2 (141-221)||(42248783-42248863)
chr2 (147-210)||(7559815-7559878)
chr2 (141-221)||(34069975-34070055)
chr2 (155-218)||(19891921-19891984)
chr2 (147-218)||(30658736-30658807)
chr2 (147-220)||(17327616-17327690)
chr2 (144-209)||(26897194-26897260)
chr2 (141-190)||(28855718-28855767)
chr2 (141-221)||(25375445-25375525)
chr2 (89-226)||(5089520-5089654)
chr2 (16-66)||(11658524-11658574)
chr2 (134-226)||(42914884-42914973)
[»] scaffold0015 (2 HSPs)
scaffold0015 (141-221)||(193725-193805)
scaffold0015 (144-218)||(188042-188116)
[»] scaffold1910 (1 HSPs)
scaffold1910 (143-221)||(422-500)
[»] scaffold0061 (1 HSPs)
scaffold0061 (140-218)||(49441-49519)
[»] scaffold0017 (1 HSPs)
scaffold0017 (140-218)||(149115-149193)
[»] chr1 (33 HSPs)
chr1 (140-218)||(10140677-10140755)
chr1 (141-221)||(41387433-41387513)
chr1 (146-213)||(14724504-14724571)
chr1 (141-218)||(10135909-10135986)
chr1 (144-221)||(22428656-22428733)
chr1 (141-218)||(26927155-26927232)
chr1 (141-218)||(41097416-41097493)
chr1 (145-221)||(1067037-1067113)
chr1 (141-221)||(16836744-16836824)
chr1 (141-221)||(39243481-39243561)
chr1 (141-221)||(39247036-39247116)
chr1 (134-213)||(26198922-26199001)
chr1 (141-218)||(18784011-18784089)
chr1 (90-220)||(25187995-25188125)
chr1 (141-218)||(3094648-3094725)
chr1 (141-221)||(1924512-1924592)
chr1 (142-210)||(19725363-19725431)
chr1 (141-221)||(20923526-20923606)
chr1 (144-221)||(14804060-14804137)
chr1 (145-218)||(51040949-51041022)
chr1 (152-221)||(52100690-52100759)
chr1 (141-221)||(21498207-21498287)
chr1 (141-220)||(13893873-13893952)
chr1 (16-63)||(14724680-14724727)
chr1 (141-207)||(40232846-40232912)
chr1 (144-221)||(14819528-14819605)
chr1 (140-221)||(17213901-17213982)
chr1 (141-209)||(2384704-2384772)
chr1 (134-218)||(33055595-33055679)
chr1 (88-224)||(39747002-39747134)
chr1 (141-212)||(2367608-2367679)
chr1 (178-221)||(7882566-7882609)
chr1 (86-226)||(26650882-26651019)
[»] scaffold0067 (1 HSPs)
scaffold0067 (89-226)||(33684-33821)
[»] scaffold0044 (2 HSPs)
scaffold0044 (144-221)||(64716-64793)
scaffold0044 (144-221)||(81114-81191)
[»] scaffold0004 (1 HSPs)
scaffold0004 (143-221)||(199748-199826)
[»] scaffold0357 (1 HSPs)
scaffold0357 (144-221)||(3808-3885)
[»] scaffold0327 (1 HSPs)
scaffold0327 (144-213)||(19683-19752)
[»] scaffold0132 (1 HSPs)
scaffold0132 (144-221)||(24757-24834)
[»] scaffold0575 (1 HSPs)
scaffold0575 (141-221)||(5339-5419)
[»] scaffold0572 (1 HSPs)
scaffold0572 (141-221)||(10434-10514)
[»] scaffold0431 (1 HSPs)
scaffold0431 (141-221)||(14935-15015)
[»] scaffold0232 (1 HSPs)
scaffold0232 (141-221)||(11750-11830)
[»] scaffold0018 (1 HSPs)
scaffold0018 (141-221)||(21863-21943)
[»] scaffold0011 (2 HSPs)
scaffold0011 (141-221)||(126959-127039)
scaffold0011 (94-226)||(7289-7418)
[»] scaffold0060 (2 HSPs)
scaffold0060 (140-218)||(47430-47508)
scaffold0060 (140-218)||(52374-52452)
[»] scaffold0041 (1 HSPs)
scaffold0041 (140-218)||(35161-35239)
[»] scaffold0020 (1 HSPs)
scaffold0020 (140-218)||(697-775)
[»] scaffold0155 (1 HSPs)
scaffold0155 (144-221)||(22231-22308)
[»] scaffold0452 (1 HSPs)
scaffold0452 (141-221)||(12426-12506)
[»] scaffold0415 (1 HSPs)
scaffold0415 (141-221)||(1044-1124)
[»] scaffold0229 (1 HSPs)
scaffold0229 (141-221)||(10884-10964)
[»] scaffold0157 (1 HSPs)
scaffold0157 (141-221)||(32043-32123)
[»] scaffold0141 (1 HSPs)
scaffold0141 (141-221)||(13470-13550)
[»] scaffold0124 (1 HSPs)
scaffold0124 (141-221)||(21444-21524)
[»] scaffold0034 (1 HSPs)
scaffold0034 (141-221)||(121122-121202)
[»] scaffold0031 (1 HSPs)
scaffold0031 (141-221)||(35469-35549)
[»] scaffold0182 (1 HSPs)
scaffold0182 (141-218)||(9338-9416)
[»] scaffold0991 (1 HSPs)
scaffold0991 (144-221)||(254-331)
[»] scaffold0205 (1 HSPs)
scaffold0205 (141-221)||(30823-30903)
[»] scaffold0096 (1 HSPs)
scaffold0096 (141-221)||(22265-22345)
[»] scaffold0045 (1 HSPs)
scaffold0045 (162-218)||(81374-81430)
[»] scaffold0027 (1 HSPs)
scaffold0027 (129-213)||(43355-43439)
[»] scaffold0628 (1 HSPs)
scaffold0628 (141-204)||(6961-7024)
[»] scaffold0019 (1 HSPs)
scaffold0019 (144-221)||(30240-30317)
[»] scaffold0292 (1 HSPs)
scaffold0292 (141-221)||(7723-7803)
[»] scaffold0009 (1 HSPs)
scaffold0009 (141-220)||(70376-70456)
[»] scaffold0070 (1 HSPs)
scaffold0070 (140-207)||(58996-59063)
[»] scaffold0054 (1 HSPs)
scaffold0054 (173-221)||(29756-29804)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 1740754 - 1740963
Alignment:
Q  15 agaaggttccggatatatccacacacgaaaacaaacgcggtttgttttagagttaatccgtttaaatactccgttttttgttacgaactcttcatataaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  1740754 agaaggttccggatatatccacacacgaaaacaaacgcggtttgttttagagttaattcatttaaatactctgttttttgttacgaactcttcatataaa 1740853  T
Q  115 atgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtcc 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  1740854 atgagagttcgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgcttttcctctcttctccctttttcaacttgtgttgacgagtca 1740953  T
Q  215 ttcttctgct 224  Q
    ||||||||||    
T  1740954 ttcttctgct 1740963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 795052 - 795254
Alignment:
Q  16 gaaggttccggatatatccacacacgaaaacaaacgcggtttgttttagagttaatccgtttaaatactccgttttttgttacgaactcttcatataaaa 115  Q
    ||||||||| |||||||||||||  |||||||||| |  ||||||||||||||||||| |||||  ||||  ||||| ||||||| |||| | |||||||    
T  795052 gaaggttccagatatatccacac--gaaaacaaacaccatttgttttagagttaatccctttaatcactctattttt-gttacgatctctccctataaaa 795148  T
Q  116 tgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtcct 215  Q
     ||||  |   ||||| |||||||||||| ||||||||||||||| |||||||| | ||||||||| ||||| ||||||| |||||||||||||||||||    
T  795149 ggagaactcccctcacctattctttacactgaaattcacagttgatgcttcatgcgcttttcctctattctctctttttcgacttgtgttgacgagtcct 795248  T
Q  216 tcttct 221  Q
    ||||||    
T  795249 tcttct 795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 26928938 - 26928847
Alignment:
Q  135 ttctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  26928938 ttctttacaccgaaattcacagttgatgattcatgtgcttttcctctcttctcccttcttcgacttgtgttgacgagcccttcttctgcttc 26928847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 21494027 - 21494160
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    |||||||||||||| ||||| ||||||| ||||  | | | |||| ||||||  ||||||||||||||||||| | |||||||| |||||||||||||||    
T  21494027 ttttttgttacgaattcttcctataaaaggagatctcgccccactcattcttaccaccgaaattcacagttgatgattcatgtgcttttcctctcttctc 21494126  T
Q  188 cctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||  ||| |||||||||||||||||||||||||    
T  21494127 cctccttcgacttgtgttgacgagtccttcttct 21494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 39775162 - 39775239
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  39775162 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 39775239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 6025542 - 6025407
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||| |||||| | ||||||| ||| | | ||| |||| ||||||||||||||| ||||||||||| | || |||||||||||||||||||    
T  6025542 cgttttttgttacaaactctccctataaaaggagggctcgtcccactcattctttacaccgaatttcacagttgatgatttatgtgtttttcctctcttc 6025443  T
Q  186 --tccctttttcaacttgtgttgacgagtccttctt 219  Q
      |||||  ||| |||||||||||| | ||||||||    
T  6025442 tatccctccttcgacttgtgttgacaattccttctt 6025407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 14425294 - 14425381
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| ||||||||||||||||||||| | ||| |||| |||||||| |||||||||||||| |||||| |||||||||| |||||||    
T  14425294 attctgtacaccgaaattcacagttgatgattcctgtgcttttcctcccttctccctttttcgacttgtcttgacgagtctttcttct 14425381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 3034279 - 3034202
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  3034279 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 3034202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 3693254 - 3693177
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  3693254 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 3693177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 8223568 - 8223491
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  8223568 ccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttctttgacttgtgttgacgagtctttcttct 8223491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8883806 - 8883729
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  8883806 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 8883729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8888566 - 8888489
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  8888566 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 8888489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 14438134 - 14438211
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||  ||| |||||||||||| |||||||||    
T  14438134 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctccttcgacttgtgttgacaagtccttct 14438211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 18467873 - 18467796
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  18467873 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtcattct 18467796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 32473458 - 32473535
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  32473458 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtcattct 32473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16749378 - 16749458
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  16749378 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 16749458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 18350233 - 18350313
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| ||||||||| ||||| |||||||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  18350233 acaccgaaatacacagttgatgcttcctgtgtttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 18350313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 19776521 - 19776441
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  19776521 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 19776441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 10585647 - 10585725
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  10585647 tacaccaaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 10585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 3673222 - 3673145
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  3673222 acactgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 3673145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8070315 - 8070238
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  8070315 acaccgaaattcacagttgatgcttcctgtatttttcctctcttctccctcattcgacttgtgttgacaagttcttct 8070238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 8197085 - 8197008
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||| ||||||||| ||  ||||||||||||||||| |||||||    
T  8197085 ccgaaattcacagttgatgcttcctgtgcttttcctcttttctcccttctttgacttgtgttgacgagtctttcttct 8197008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 18472667 - 18472590
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||  ||| |||||||||||  |||||||||    
T  18472667 acaccgaaattcacagttaatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgataagtccttct 18472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 26707147 - 26707018
Alignment:
Q  91 tttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccct 190  Q
    ||||||||||| ||| | ||||||| ||||| ||| |||||||||||||||||||||||   || ||||| | ||| |||  ||||||||||||| ||||    
T  26707147 tttgttacgaagtctacctataaaaagagaggttgcctcacttattctttacaccgaaaaataccgttgatgtttcctgtacttttcctctcttcgccct 26707048  T
Q  191 ttttcaacttgtgttgacgagtccttcttc 220  Q
     |||| |||||||||||  |||| ||||||    
T  26707047 gtttcgacttgtgttgagaagtcattcttc 26707018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 4106784 - 4106864
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  4106784 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 4106864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 4110636 - 4110716
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  4110636 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 4110716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 9707049 - 9707129
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||| ||||||||||| |||||||    
T  9707049 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgggttgacgagtctttcttct 9707129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 14672029 - 14671949
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  |||||||||||||| || |||||||    
T  14672029 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgaatctttcttct 14671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 15965691 - 15965611
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15965691 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15965611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 15969615 - 15969535
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15969615 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15969535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 15973539 - 15973459
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15973539 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15973459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 37439021 - 37439096
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttctt 219  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||| |||  ||||||||||||||||| |||||    
T  37439021 ccgaaattcacagttgatacttcatgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttctt 37439096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 20810751 - 20810614
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||||| ||||||| ||||| | | | | || |||||| ||||| || ||| ||||||| | ||| ||||   |||||||||||    
T  20810751 cgttttttgttacgaactcttcctataaaaggagagctcgcccccctcattcttcacaccaaatttcgcagttgatgattcctgtgcgattcctctcttc 20810652  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||   ||| ||||||||| ||||||| ||||||||||||    
T  20810651 tccc---ttcgacttgtgttaacgagtcattcttctgcttc 20810614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 29864 - 29792
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||| ||| | ||| |||| ||||||||||||||||||| ||| |||||| ||||||||||    
T  29864 acaccgaaattcacagatgatgattcctgtgcttttcctctcttctcccttcttcgacttgtcttgacgagtc 29792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 8488848 - 8488928
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||| | |||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  8488848 acaccgaaagttacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 8488928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 18699236 - 18699316
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||| |||| ||||| |||| ||||| |||||||||||| |||  |||||||||||| |||| |||||||    
T  18699236 acaccgaaattcacacttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacaagtctttcttct 18699316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 22758638 - 22758718
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| ||   ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  22758638 acaccgaaattcacagttgatgcttcttgcacttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 22758718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 25023633 - 25023768
Alignment:
Q  82 actccgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctct 181  Q
    |||||| ||||||||| || |||| | ||||||| ||||| | | | |||| ||||  |||| ||||||||||||||   | ||| | ||||||||||||    
T  25023633 actccgatttttgttatgagctctccctataaaaggagagctcgccccactcattcagtacatcgaaattcacagttagtgtttcctatgtttttcctct 25023732  T
Q  182 cttctccctttttcaacttgtgttgacgagtccttctt 219  Q
    |||||||||||||| | |  ||||||||||||||||||    
T  25023733 cttctccctttttcgagt--tgttgacgagtccttctt 25023768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 26962437 - 26962334
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||| |||||||| ||||||| ||||| | | | ||||   |||||||||  ||||||||| | || | ||| ||||||||||||||||||    
T  26962437 cgttttttgttacaaactcttcctataaaaggagagctcgccccactccatctttacactaaaattcacaatcgatgattcctgtgtttttcctctcttc 26962338  T
Q  186 tccc 189  Q
    ||||    
T  26962337 tccc 26962334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 38436674 - 38436811
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||||||||| || ||||||| ||||| | | | | || |||||| |||||||| |||||||| || | ||| ||||   |||||||||||    
T  38436674 cgttttttgttacgaactcctcctataaaaggagagctcgcccccctcattcttcacaccgaatttcacagtcgatgattcctgtgcgattcctctcttc 38436773  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||    | ||||||||| ||||||  ||||||||||||    
T  38436774 tccctc---cgacttgtgttaacgagttgttcttctgcttc 38436811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 45904002 - 45904080
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||| | | ||| |||| ||||||||||||||||||  ||  |||||||||||| ||| |||||    
T  45904002 tacaccgaaattcacagttaatgtttcctgtgcttttcctctcttctccctccttgtacttgtgttgacaagttcttct 45904080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 53358724 - 53358660
Alignment:
Q  155 agttgaggcttcatgtgttttt-cctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| ||||||||| ||||||| ||||    
T  53358724 agttgatgcttcatgtgttttttcctctcttctccctccttcgacttgtgttaacgagtcattct 53358660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 43888580 - 43888639
Alignment:
Q  162 gcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  43888580 gcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 43888639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 1688651 - 1688737
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    |||||||||||| |||  ||||| ||| ||||  | ||||||||||||||||||||| |||  |||||| |||| ||||| ||||||    
T  1688651 attctttacacctaaaaacacagatgatgctttttatgtttttcctctcttctccctcttttgacttgtattgatgagtctttcttc 1688737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 53119859 - 53119770
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||||||||||||| | |||||| || | ||||||||   ||| |||||||||||||   | ||||||||| ||||||| ||||||||||||    
T  53119859 attctttacaccgaattccacagtcgatgattcatgtgcgattcttctcttctccctt---cgacttgtgttaacgagtcgttcttctgcttc 53119770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 6595857 - 6595898
Alignment:
Q  147 aaattcacagttgaggcttcatgtgtttttcctctcttctcc 188  Q
    ||||||| |||||| ||||| |||||||||||||||||||||    
T  6595857 aaattcatagttgatgcttcctgtgtttttcctctcttctcc 6595898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 47408686 - 47408645
Alignment:
Q  172 tttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  47408686 tttttcctctcttctccctccttcgacttgtgttgacgagtc 47408645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 27604946 - 27604998
Alignment:
Q  168 tgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    |||| ||||||||||||| |||| |||| ||||||||||  ||||||||||||    
T  27604946 tgtgattttcctctcttccccctctttcgacttgtgttggtgagtccttcttc 27604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 51922970 - 51922890
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| | |||  |||  |||| |||||||||||| |||  || || ||||||||||| |||||||    
T  51922970 acaccgaaattcacagttgatgattcccgtgcctttcttctcttctccctcttttgacctgcgttgacgagtctttcttct 51922890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 33848457 - 33848254
Alignment:
Q  16 gaaggttccggatatatccacacacgaaaacaaacgcggtttgttttagagttaatccgtttaaatactccgttttttgttacg-aactcttcatataaa 114  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||  |||||||||||||||||| |||||| | ||||||    
T  33848457 gaaggttccggatatatccacacacgaaaacaaacacggtttgttttagagttaatcccttaaatcactccgttttttgttacgaaactctccctataaa 33848358  T
Q  115 atgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtcc 214  Q
    | ||||| | | |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| || |  |||||| |||||||||| |||||||    
T  33848357 aggagagctcgcctcacttattctttacaccgaaattcacagttgagg-ttcttgtgcttttcctctcctccctttttttcgacttgtgttgtcgagtcc 33848259  T
Q  215 ttctt 219  Q
    |||||    
T  33848258 ttctt 33848254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 4237800 - 4237876
Alignment:
Q  142 caccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  4237800 caccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 4237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 4242539 - 4242615
Alignment:
Q  142 caccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  4242539 caccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 4242615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21384380 - 21384300
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  21384380 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 21384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21387800 - 21387720
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  21387800 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 21387720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21411659 - 21411579
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| ||||| |||  ||||||||||||||||| |||||||    
T  21411659 acaccgaaattcacagttgatgcttcatgtgcttttcttctcttttccctcttttgacttgtgttgacgagtctttcttct 21411579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21806151 - 21806071
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| ||||| |||  ||||||||||||||||| |||||||    
T  21806151 acaccgaaattcacagttgatgcttcatgtgcttttcttctcttttccctcttttgacttgtgttgacgagtctttcttct 21806071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 23915128 - 23915048
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  23915128 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 23915048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 25367443 - 25367511
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgac 208  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||  ||| ||||||||||||    
T  25367443 tacaccgaaattcacaattgatgcttcatgtgtttttcctctcttctccctccttcgacttgtgttgac 25367511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 22104318 - 22104231
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| |||||||||||||||| |||| | ||| |||| |||||||| |||||||||||||| |||||| |||||||||| |||||||    
T  22104318 attctgtacaccgaaattcacatttgatgattcctgtgcttttcctcccttctccctttttcgacttgtcttgacgagtctttcttct 22104231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 8330820 - 8330898
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||| ||| |||||||||    
T  8330820 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgtcgacaagtccttct 8330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 34818163 - 34818241
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||||| |  ||| |||||||||||| |||||||||    
T  34818163 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccatccttcgacttgtgttgacaagtccttct 34818241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 43302146 - 43302219
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  43302146 cgaaattcacagttgatgcttcctatgtttttcctctcttctccctcattcgacttgtgttgacaagtccttct 43302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 4582754 - 4582834
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| ||||||||| ||||| |||||||||| ||||| |||||| |||  ||||||||||||||||| |||||||    
T  4582754 acaccgaaatacacagttgatgcttcctgtgtttttcttctctcctccctcttttgacttgtgttgacgagtctttcttct 4582834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 18862028 - 18862108
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  18862028 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 18862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 21827397 - 21827477
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  21827397 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 21827477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 37772344 - 37772265
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaactt-gtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||| |||||||| |||| ||||    
T  37772344 tacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttggtgttgacaagtcgttct 37772265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16066675 - 16066758
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctct---cttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| ||| |||||| |||   ||||||||| |||| ||||||||||||||||| |||||||    
T  16066675 acaccgaaattcacagttgatgcttcctgtatttttcttcttctcttctccctctttcgacttgtgttgacgagtctttcttct 16066758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 19393192 - 19393269
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||| ||||||||||||| ||| | |||| |||||||||| |||||||    
T  19393192 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcccttcttcgatttgtcttgacgagtctttcttct 19393269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 31449323 - 31449400
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||  ||  |||||||||||| ||| |||||    
T  31449323 acaccgaaattcacagttgatgctttctgtgtttttcctctcttctccctcctttgacttgtgttgacaagttcttct 31449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 31030908 - 31030771
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||||||||| || ||||||| ||||| | | | | || ||||||||||||||| | || ||| || | ||| ||||   |||||||||||    
T  31030908 cgttttttgttacgaactcctcctataaaaggagagctcgcccccctcattctttacaccgaattccatagtcgatgattcctgtgcaattcctctcttc 31030809  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||   ||| ||||||||| ||||||| ||||||||||||    
T  31030808 tccc---ttcgacttgtgttaacgagtcattcttctgcttc 31030771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 25733623 - 25733703
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||  ||||| | |||||||||| |||  | ||||||||||||||| |||||||    
T  25733623 acaccgaaattcacagttgatgcttcctgtacttttcttgtcttctccctcttttgatttgtgttgacgagtctttcttct 25733703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 19566540 - 19566410
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||| |||||| || ||||||| ||||| | | | | || |||||||||| |||| ||| ||||||| | ||||||||   |||||||||||    
T  19566540 cgttttttgttatgaactcctcctataaaaggagagctcgcccccctcattctttacatcgaatttcgcagttgatgattcatgtgcgattcctctcttc 19566441  T
Q  186 tccctttttcaacttgtgttgacgagtccttctt 219  Q
    ||||   ||| ||||||||| ||||||| |||||    
T  19566440 tccc---ttcgacttgtgttaacgagtcattctt 19566410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 33616442 - 33616579
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||| |||||| || ||||||| ||||| | | | | || ||||||||||||||| | |||||| || | ||| ||||   ||||||| |||    
T  33616442 cgttttttgttatgaactcctcctataaaaggagagctcgcccccctcattctttacaccgaattccacagtcgatgattcttgtgcgattcctcttttc 33616541  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||||   | ||||||||| ||||||| ||||||||||||    
T  33616542 tccctt---cgacttgtgttaacgagtcattcttctgcttc 33616579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 19430391 - 19430261
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||| |||||| || ||||||| ||||| | | | | || |||||||||| |||| ||| ||||||| | ||| ||||   |||||||||||    
T  19430391 cgttttttgttatgaactcctcctataaaaggagagctcgcccccctcattctttacatcgaatttcgcagttgatgattcctgtgcgattcctctcttc 19430292  T
Q  186 tccctttttcaacttgtgttgacgagtccttctt 219  Q
    ||||   ||| ||||||||| ||||||| |||||    
T  19430291 tccc---ttcgacttgtgttaacgagtcattctt 19430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 3902652 - 3902513
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||| | ||||||| |||||||   | |||| ||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  3902652 cgttttttgttacgaactctgcctataaaaggagagttcc-cgcactcattctttacactgaaattcacagttgatgattcatgtgtttttcctctcttc 3902554  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  3902553 tcccttcttcgacttgtgttgacgagtcattcttctgcttc 3902513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 11956419 - 11956554
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||| | ||||||| ||||| |   | |||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||    
T  11956419 cgttttttgttacgaactctacctataaaaggagagctctccccactcattctttacaccgaaattcacagttgatgattcctgtgcttttcctctcttc 11956518  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| |||| || | ||||||||||||||||||||    
T  11956519 tccctctttcgacgtatgttgacgagtccttcttct 11956554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 3902292 - 3902155
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    |||||||||||||||||| | ||||||| |||||||   | |||| ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  3902292 ttttttgttacgaactctgcctataaaaggagagttcccc-cactcattctttacactgaaattcacaattgatgattcatgtgtttttcctctcttctc 3902194  T
Q  188 cctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||  ||| | ||||||||||||||| ||||||||||||    
T  3902193 cctccttcgaattgtgttgacgagtcattcttctgcttc 3902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 5600690 - 5600821
Alignment:
Q  89 tttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctcc 188  Q
    |||||||||| |||||| | ||||||| ||||| ||| |||||||||||||||| |||||||||| | |||| |||||  |||||||||||||||||||     
T  5600690 tttttgttacaaactctccctataaaaggagagcttgcctcacttattctttactccgaaattcataattgatgcttccagtgtttttcctctcttctct 5600789  T
Q  189 ctttttcaacttgtgttgacgagtccttcttc 220  Q
    || |||  |||||||||||| | |||||||||    
T  5600790 ctgtttagacttgtgttgacaaatccttcttc 5600821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 29325915 - 29325778
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    |||||||||||||||||  | ||||||| ||||| |   | |||| |||||||||||||||||||| |||||| | ||| |||| ||||| ||| |||||    
T  29325915 ttttttgttacgaactcagcctataaaaggagagctcccc-cactcattctttacaccgaaattcatagttgatgattcctgtgcttttcgtctattctc 29325817  T
Q  188 cctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||  ||| ||||||||||||||||||||||||||||||    
T  29325816 cctccttcgacttgtgttgacgagtccttcttctgcttc 29325778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 17963993 - 17964070
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  17963993 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 17964070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 19772470 - 19772550
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  19772470 acaccgaaattcacagttgatgcttcatgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 19772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 27324517 - 27324597
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||| |||  |||||| |||||||||| |||||||    
T  27324517 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctcttttgacttgtattgacgagtctttcttct 27324597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 14073768 - 14073691
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||| | | ||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  14073768 ccgaaattcacagttcatgattcttgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 14073691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 26981228 - 26981151
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||| ||||||||| ||||| |||| ||||| ||||||||||||||||| |||||| |||||||||| |||||||    
T  26981228 ccgaaatacacagttgatgcttcctgtgcttttcttctcttctccctttttcgacttgtcttgacgagtctttcttct 26981151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 2077448 - 2077368
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| ||||||||| || |||  ||||||||||||||||| |||||||    
T  2077448 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctctctcttttgacttgtgttgacgagtctttcttct 2077368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 15704369 - 15704448
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||| |||||||||||| ||||| |||||||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15704369 acaccgagattcacagttgatgcttcctgtgtttttcttctcttctccctcttt-gacttgtgttgacgagtctttcttct 15704448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 16625052 - 16624972
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  | ||||||||||||||| |||||||    
T  16625052 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgaattgtgttgacgagtctttcttct 16624972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 16761018 - 16760938
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  16761018 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 16760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 22806987 - 22806907
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  22806987 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 22806907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 22949868 - 22949788
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  22949868 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 22949788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 22953824 - 22953744
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  22953824 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 22953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 23872312 - 23872232
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  23872312 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 23872232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 23876268 - 23876188
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  23876268 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 23876188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 6112217 - 6112292
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtcctt 216  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||  |||||||||||| |||||||    
T  6112217 acaccgaaattcacagttgatgcttcttgtgcttttcctctcttctccctcatttgacttgtgttgacaagtcctt 6112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 17281283 - 17281416
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    ||||||||||| |||||| | ||||||| ||||| |   | |||| |||||| ||||||||||||| |||||| ||||| |||| |||||||| ||||||    
T  17281283 ttttttgttacaaactctccctataaaaggagagctcaccccactcattcttaacaccgaaattcatagttgatgcttcctgtgcttttcctcccttctc 17281382  T
Q  188 cctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||   ||| ||||||||| ||||||  ||||||||||||    
T  17281383 cc---ttcgacttgtgttaacgagt--ttcttctgcttc 17281416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8748421 - 8748343
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgttttt-cctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||| |||| ||||| || |||||| ||||||||||||||  ||| |||||||||||| |||||||||    
T  8748421 acaccgaaattcacaattgatgcttcttgggttttttcctctcttctccctccttcgacttgtgttgacaagtccttct 8748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 18387558 - 18387488
Alignment:
Q  151 tcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| | ||| |||| ||||||||||||||||||| ||| |||| |||||||||||| |||||||    
T  18387558 tcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttctgttgacgagtctttcttct 18387488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 27073618 - 27073541
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||| ||||||||| | ||| |||| ||||| ||||||||||||||||| |||||| |||| ||||| |||||||    
T  27073618 ccgaaatacacagttgatgtttcctgtgcttttcttctcttctccctttttcgacttgtcttgatgagtctttcttct 27073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 10643013 - 10642958
Alignment:
Q  164 ttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttctt 219  Q
    |||||||| |||||||||||||| |||||||  ||||||||| |||||||||||||    
T  10643013 ttcatgtgcttttcctctcttcttccttttttgacttgtgttaacgagtccttctt 10642958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 24588636 - 24588714
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgttttt-cctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||||||||||  ||| ||||||||| |  |||||||||    
T  24588636 acaccgaaattcacagttgatgcttcctatgtttttccctctcttctccctccttcgacttgtgttaagaagtccttct 24588714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 31477162 - 31477242
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| |||||||||||||| ||||  | || ||||| |||||||||||| |||  |||||||| |||||||| |||||||    
T  31477162 acaccaaaattcacagttgatgctttctttgcttttcttctcttctccctcttttgacttgtgtcgacgagtctttcttct 31477242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 2699565 - 2699608
Alignment:
Q  178 ctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||  ||||||||||||||||| |||||||    
T  2699565 ctctcttctcccttttttgacttgtgttgacgagtctttcttct 2699608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 5600607 - 5600655
Alignment:
Q  17 aaggttccggatatatccaca--cacgaaaacaaacgcggtttgtttta 63  Q
    |||||||||||||||||||||  | |||||||||||| |||||||||||    
T  5600607 aaggttccggatatatccacacgcgcgaaaacaaacgtggtttgtttta 5600655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 19478514 - 19478390
Alignment:
Q  99 gaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaac 198  Q
    ||||||||| ||||||| ||||| | | | | || |||||| |||||||| ||| ||||||| | ||| |||||  |||||||||||| ||   ||| ||    
T  19478514 gaactcttcctataaaaggagagctcgcccccctcattcttcacaccgaatttcgcagttgatgattcctgtgtgattcctctcttcttcc---ttcgac 19478418  T
Q  199 ttgtgttgacgagtccttcttctgcttc 226  Q
    ||||||| ||||||| ||||||| ||||    
T  19478417 ttgtgttaacgagtcattcttctacttc 19478390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 30564129 - 30564264
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||| | ||||||| ||||| | ||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  30564129 cgttttttgttacgaactctccctataaaaggagagctcgtcccactcattctttacaccgaaattcacagttgatgattcatgtgtttttcctctcttc 30564228  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||  ||| |||||||||||| ||| ||||||||    
T  30564229 tccctccttcgacttgtgttgacaagttcttcttct 30564264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 10318491 - 10318631
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||| |||||| | ||||||| ||||| |   |  ||| ||||||||||||||||||||||||| | | ||||| ||||||||||||||||    
T  10318491 cgttttttgttacaaactctgcctataaaaggagagctcccccaactcattctttacaccgaaattcacagttcatgattcatttgtttttcctctcttc 10318590  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||  ||| ||||||||||| ||||||||||||||||||    
T  10318591 tccctccttcgacttgtgttgatgagtccttcttctgcttc 10318631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 24490411 - 24490274
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||| | ||||||| ||||| |||   |||| |||||| |||||||||||||||||||| | ||| |||| |||||||||||||    
T  24490411 cgttttttgttacgaactctccctataaaaggagagcttgctccactcattcttcacaccgaaattcacagttgatgattcttgtgcttttcctctcttc 24490312  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||   ||| ||||||||| ||||||| ||||||||||||    
T  24490311 tccc---ttcgacttgtgttaacgagtcattcttctgcttc 24490274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 14899077 - 14899154
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  14899077 ccgaaattcacagttgatgattcatgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 14899154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 41817418 - 41817342
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttc 217  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||||||||    
T  41817418 acaccgaaattcacagttgatgcttcttgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttc 41817342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34561061 - 34560983
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||||||||    
T  34561061 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgttgacaagtccttct 34560983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 3997520 - 3997597
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  3997520 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 3997597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 5270858 - 5270935
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||  ||| |||||||||||| |||||||||    
T  5270858 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctccttcgacttgtgttgacaagtccttct 5270935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 5927652 - 5927729
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  5927652 acactgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 5927729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 14868529 - 14868606
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  14868529 ccgaaattcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 14868606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 14877405 - 14877328
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  14877405 ccgaaattcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 14877328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 15011274 - 15011354
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15011274 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15011354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 15225801 - 15225721
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  15225801 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15225721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 10120297 - 10120434
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||||| ||||||| ||||| | | | | || |||||  |||||||| |||||||| || | ||| |||||  |||||||||||    
T  10120297 cgttttttgttacgaactcttcctataaaaggagagctcgcccccctcattctacacaccgaatttcacagtcgatgattcctgtgtgattcctctcttc 10120396  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||   ||| ||||||||| ||||||| ||||||||||||    
T  10120397 tccc---ttcgacttgtgttaacgagtcattcttctgcttc 10120434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 8660861 - 8660938
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||| |||||||||||| ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||||||||    
T  8660861 acaccgagattcacagttgatgcttcctgtgcttttcctctcttctacctctttcgacttctgttgacgagtccttct 8660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 9185145 - 9185222
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| |||||| | ||| |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  9185145 ccgaaattcagagttgatgattcctgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttct 9185222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 9191010 - 9191087
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| |||||| | ||| |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  9191010 ccgaaattcagagttgatgattcctgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttct 9191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 10713576 - 10713496
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||| ||||| |||||||    
T  10713576 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgatgagtctttcttct 10713496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 10927346 - 10927266
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||| ||||| |||||||    
T  10927346 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgatgagtctttcttct 10927266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 12488434 - 12488354
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  12488434 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 12488354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 14953513 - 14953593
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  14953513 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 14953593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 18023257 - 18023177
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  |||||||||||||| || |||||||    
T  18023257 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgaatctttcttct 18023177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 25690630 - 25690550
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  25690630 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 25690550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 31728803 - 31728879
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||  ||| |||||||||||| ||| ||||||||    
T  31728803 cgaaattcacagttgatgcttcctgtgtttttcttctcttctccctcattcgacttgtgttgacaagttcttcttct 31728879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 26034819 - 26034744
Alignment:
Q  146 gaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| |||||| || | |||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  26034819 gaaatacacagtcgatgtttcatgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 26034744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8694374 - 8694297
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||  ||| | ||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  8694374 acaccgaaattcacaaatgatgattcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 8694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 17359872 - 17359768
Alignment:
Q  90 ttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccc 189  Q
    ||||||||||||||||   ||||||| ||||||| | |||||||||| || |||| ||||||| ||||||| | |||||||| |||| ||||||||||||    
T  17359872 ttttgttacgaactctcactataaaaggagagttcgcctcacttattattgacactgaaattc-cagttgatgtttcatgtgctttttctctcttctccc 17359774  T
Q  190 tttttc 195  Q
    | ||||    
T  17359773 tctttc 17359768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 31766532 - 31766455
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||   ||| ||||||| |||||||||||||||  ||| |||||||||||| |||||||||    
T  31766532 acaccgaaattcacagttgatatttcctgtgtttctcctctcttctccctccttcgacttgtgttgacaagtccttct 31766455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 47575298 - 47575221
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||| |||||| ||  | |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  47575298 acaccgaaattcaaagttgatgcaacctgtgtttttcctctcttctccctcattcgacttgtgttgacaagtccttct 47575221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 7902569 - 7902646
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||| |||| ||||| |||| |||||||| |||||||||  ||| |||||||||||| |||| ||||    
T  7902569 acaccgaaattcacatttgatgcttcctgtgcttttcctcgcttctccctccttcgacttgtgttgacaagtcgttct 7902646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 13521447 - 13521516
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttt-tcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||  ||| |||||||||||| ||||    
T  13521447 cgaaattcacagttgatgcttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagtc 13521516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 3258452 - 3258372
Alignment:
Q  117 gagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaa 197  Q
    ||||||| | |||||| |||||| |||| ||||  |||| |||| | ||||||||||||||||||||||||||| ||||||    
T  3258452 gagagttcgcctcactcattcttcacactgaaaaacacatttgatgtttcatgtgtttttcctctcttctccctctttcaa 3258372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 10120527 - 10120662
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    |||||||||||||||||||| ||||||| ||||| | | | | || |||||  |||||||| ||| |||| || | ||| |||||  ||||||||| |||    
T  10120527 ttttttgttacgaactcttcctataaaaggagagctcgcccccctcattctacacaccgaatttcgcagtcgatgattcctgtgtgattcctctctactc 10120626  T
Q  188 cctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||   ||| ||||||||| ||||||| ||||||||||||    
T  10120627 cc---ttcgacttgtgttaacgagtcattcttctgcttc 10120662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 39320196 - 39320121
Alignment:
Q  143 accgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||| |  ||||| | |||| ||| ||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  39320196 accgaaatttaacgttgatgtttcacgtgcttttcctctcttctccctccttcgacttgtgttaacgagtccttct 39320121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 15451558 - 15451481
Alignment:
Q  82 actccgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttga 160  Q
    |||| ||||||| |||| |||||| | ||||||| ||||| ||||| |||||||||  ||||| |||||||||||||||    
T  15451558 actcagttttttattacaaactctccctataaaaggagagcttgtc-cacttattcagtacactgaaattcacagttga 15451481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 19102609 - 19102561
Alignment:
Q  173 ttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||| ||||||||||||||| |  ||||||||||||||||| |||||||    
T  19102609 tttttctctcttctccctttcttgacttgtgttgacgagtctttcttct 19102561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 47762005 - 47761865
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    |||||||||||||||||||| | ||||||||||||| | | | |||| |||||||||||||||||||||| |||| | |||||||| || ||||||||||    
T  47762005 cgttttttgttacgaactctgcctataaaatgagagctcgccccactcattctttacaccgaaattcacaattgatgattcatgtgcttctcctctcttc 47761906  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||  ||| ||||||||||||||||| ||||||||||||    
T  47761905 tccctccttcgacttgtgttgacgagtctttcttctgcttc 47761865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 19096884 - 19096810
Alignment:
Q  147 aaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  19096884 aaattcacagttgatgcttcatgtgtttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 19096810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 27256874 - 27256796
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  |||||||||||||||| |||||||||    
T  27256874 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcaacttgtgttgacaagtccttct 27256796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 26341868 - 26341791
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  26341868 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 26341791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 47102175 - 47102098
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  47102175 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 47102098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 40864820 - 40864898
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||||||||    
T  40864820 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgttgacaagtccttct 40864898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8076686 - 8076609
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||  ||  |||||||||||| |||||||||    
T  8076686 acaccgaaattcacagttgatgcttcatgtgtttttcctctcttctctctccttagacttgtgttgacaagtccttct 8076609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 20488584 - 20488504
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  20488584 acaccgaaattcacagttgatgcttcgtgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 20488504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 36477613 - 36477533
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||||||||| ||| |||||||| |||  ||||||||||||||||| |||||||    
T  36477613 acaccgaaattcacagttgatgcttcctgtgtttttcttctattctccctcttttgacttgtgttgacgagtctttcttct 36477533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 7874816 - 7874947
Alignment:
Q  91 tttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaatt-cacagttgaggcttcatgtgtttttcctctcttctccc 189  Q
    ||||||||||||| | | | ||||| ||||| | | ||||||||||||| |||||||||   |||||||||  ||||||||| || ||||||||| ||||    
T  7874816 tttgttacgaactttccctttaaaaggagagctcgcctcacttattcttcacaccgaaaaaacacagttgattcttcatgtgcttatcctctcttgtccc 7874915  T
Q  190 tttttcaacttgtgttgacgagtccttcttct 221  Q
    | |||  |||||||||||||||||||||||||    
T  7874916 tcttttgacttgtgttgacgagtccttcttct 7874947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 19640936 - 19640858
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  19640936 tacaccgaaattcacagttgatgcttcttgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcattct 19640858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16459839 - 16459919
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||| ||||| |||||||    
T  16459839 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgatgagtctttcttct 16459919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 16580861 - 16580785
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||| |||  ||||||||||| ||||| |||||||    
T  16580861 cgaaattcacagttgatgcttcatgtgcttttcttctcttctccctcttttgacttgtgttgatgagtctttcttct 16580785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 18426563 - 18426483
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  18426563 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 18426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 20485223 - 20485151
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  |||||||||||||||||    
T  20485223 acaccgaaattcacagttgatgcttcgtgtgcttttcttctcttctccctcttttgacttgtgttgacgagtc 20485151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 32302475 - 32302395
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| | ||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  32302475 acaccgaaattcacagttgatgtttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 32302395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 45169389 - 45169469
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  45169389 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 45169469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 9973841 - 9973703
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||| |||||||| ||||||| ||||| | |   | || |||||| |||||||| ||| ||||||| | ||||||||   |||||||||||    
T  9973841 cgttttttgttacaaactcttcctataaaaggagagctcgctcccctcattcttaacaccgaatttcgcagttgatgattcatgtgcgattcctctcttc 9973742  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttca 227  Q
    ||||   ||| ||||||||| ||||||| |||||||||||||    
T  9973741 tccc---ttcgacttgtgttaacgagtcattcttctgcttca 9973703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 14259637 - 14259562
Alignment:
Q  146 gaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  14259637 gaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 14259562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 838893 - 838970
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||||| ||| |||||| ||||| |||| |||||||    
T  838893 ccgaaattcacggttgatgcttcctgtgttttttctctcttctcccttattcgacttgtcttgacaagtctttcttct 838970  T

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Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 846069 - 846146
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||  ||||| ||||| |||| |||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  846069 ccgaaattcatggttgatgcttcctgtgctttttctctcttctccctttttcgacttgtcttgacgagtctttcttct 846146  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 853446 - 853523
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||  ||||| ||||| |||| |||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  853446 ccgaaattcatggttgatgcttcctgtgctttttctctcttctccctttttcgacttgtcttgacgagtctttcttct 853523  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 1204073 - 1204150
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||||| ||| |||||| ||||| |||| |||||||    
T  1204073 ccgaaattcacggttgatgcttcctgtgttttttctctcttctcccttattcgacttgtcttgacaagtctttcttct 1204150  T

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Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 1211450 - 1211527
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||  ||||| ||||| |||| |||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  1211450 ccgaaattcatggttgatgcttcctgtgctttttctctcttctccctttttcgacttgtcttgacgagtctttcttct 1211527  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 8954728 - 8954805
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||| ||||||| |||||||||  |||| |||||||||||||| ||| |||||| |||||||||| |||||||    
T  8954728 ccgaaattcccagttgatgcttcatgtactttttctctcttctcccttcttcgacttgtcttgacgagtctttcttct 8954805  T

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Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 14928094 - 14928174
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||| ||| |||  ||||||||| ||||||| |||||||    
T  14928094 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttcttcctcttttgacttgtgttaacgagtctttcttct 14928174  T

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Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 15351560 - 15351640
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||| ||| |||  ||||||||| ||||||| |||||||    
T  15351560 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttcttcctcttttgacttgtgttaacgagtctttcttct 15351640  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 33226726 - 33226591
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||||||||| || ||||||| ||||| | | | | || ||||||||||||||| | |||||| || | ||| ||||   |||||||||||    
T  33226726 cgttttttgttacgaactcctcctataaaaggagagctcgcccccctcattctttacaccgaattccacagtcgatgattcctgtgcgattcctctcttc 33226627  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgct 224  Q
    ||||   ||| ||||||||| ||||||| ||||||||||    
T  33226626 tccc---ttcgacttgtgttaacgagtcgttcttctgct 33226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 9650422 - 9650491
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttt-tcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||  ||| |||||||||||| ||||    
T  9650422 cgaaattcacagttgatgcttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagtc 9650491  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 29727262 - 29727329
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgac 208  Q
    ||||| |||||||||||||| | ||| |||| ||||||||||||||| ||  ||| ||||||||||||    
T  29727262 acaccaaaattcacagttgatgtttcctgtgcttttcctctcttctctctccttcgacttgtgttgac 29727329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 44509831 - 44509909
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttt-tcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||||||| ||||| | ||| |||||||| |||||||||||| ||  ||| |||||||||||| |||||||||    
T  44509831 acactgaaattcacggttgatgtttcctgtgttttttcctctcttctctctccttcgacttgtgttgacaagtccttct 44509909  T

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Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 31987101 - 31986971
Alignment:
Q  90 ttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccc 189  Q
    ||||||||||||||||   ||||||| ||||| | | |||||||||||||||| ||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  31987101 ttttgttacgaactctcactataaaaggagagctcgcctcacttattctttacgccgaagttcacagttgatgtttcttgtgtttttcctctcttctccc 31987002  T
Q  190 tttttcaacttgtgttgacgagtccttcttc 220  Q
    | |||| |||||||||| |||||||||||||    
T  31987001 tctttcgacttgtgttgtcgagtccttcttc 31986971  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 29167407 - 29167487
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||||||||||||    
T  29167407 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttcttct 29167487  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 32461001 - 32461079
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  32461001 tacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 32461079  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 26869765 - 26869852
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||  |||||| |||||||||| |||||||    
T  26869765 attctgtacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttatacttgtcttgacgagtctttcttct 26869852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36941722 - 36941800
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  36941722 tacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 36941800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 557332 - 557255
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  557332 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 557255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 562104 - 562027
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  562104 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 562027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 12044593 - 12044670
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  12044593 acaccgaaattcaaagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 12044670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 13300948 - 13301025
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  13300948 acaccgaaattcacagttgatgcttcatgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 13301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 21826856 - 21826779
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  21826856 ccgaaattcacagttgatgattcctgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttct 21826779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 36936969 - 36937046
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  36936969 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 36937046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 10754086 - 10754006
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  10754086 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 10754006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 6154867 - 6154945
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcct-ctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||||| |||| |||||||||||| |||||||||    
T  6154867 acaccgaaattcacagttgatgcttcctgtgttttttcttctcttctccctctttcgacttgtgttgacaagtccttct 6154945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 31732174 - 31732096
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  31732174 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 31732096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 8770879 - 8770810
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacga 210  Q
    |||| ||||||||||||||| ||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  8770879 acactgaaattcacagttgatgcttcctgtgtttttcctctattctccctccttcaacttgtgttgacga 8770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 26667939 - 26667874
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttg 206  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||||||||    
T  26667939 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttg 26667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 26939536 - 26939471
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttg 206  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||||||||    
T  26939536 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttg 26939471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 36430272 - 36430195
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||| |||||  ||| |||||||||||| |||||||||    
T  36430272 acaccgaaattcatagttgatgcttcctgtgtttttcctctcttttccctccttcgacttgtgttgacaagtccttct 36430195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 41997300 - 41997223
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||  ||  |||||||||||| |||||||||    
T  41997300 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctcctttgacttgtgttgacaagtccttct 41997223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 42002069 - 42001992
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||  ||  |||||||||||| |||||||||    
T  42002069 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctcctttgacttgtgttgacaagtccttct 42001992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 7452411 - 7452337
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||  ||| |||||||| ||| |||||||||    
T  7452411 ccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctccttcgacttgtgtggacaagtccttct 7452337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 21323433 - 21323511
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||  ||| ||||| |||||| |||||||||    
T  21323433 tacaccgaaattcacagttgatgcttcctgtacttttcctctcttctccctccttcgacttgggttgacaagtccttct 21323511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 36424299 - 36424222
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| | ||  |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  36424299 acaccgaaattcacagttgatgttttctgtgtttttcctctcttctccctcattcgacttgtgttgacaagtcattct 36424222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 41097034 - 41096954
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| ||||||| | ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  41097034 acaccgaaatacacagttaatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 41096954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 3666549 - 3666474
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||  |||| ||||| ||||||||| |||||||||||||  ||| |||||||||||| |||||||||    
T  3666549 acaccgaaattcac--ttgatgcttcttgtgttttttctctcttctccctcattcgacttgtgttgacaagtccttct 3666474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 37549587 - 37549663
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||||||||||||| | ||| |||||||||| |||||||||| |  ||| |||||||||||| |||||||||    
T  37549587 acactgaaattcacagttgacg-ttcctgtgtttttcatctcttctccttccttcgacttgtgttgacaagtccttct 37549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 37652385 - 37652461
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||||||||| ||| | ||| |||||||||| |||||||||| |  ||| |||||||||||| |||||||||    
T  37652385 acactgaaattcacagctgacg-ttcctgtgtttttcatctcttctccttccttcgacttgtgttgacaagtccttct 37652461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 44683444 - 44683350
Alignment:
Q  127 ctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||| |||||| |||||||| |||||||| ||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  44683444 ctcacttatcctttaccccgaaattgacagttgatgcttcttgtgtttttcctctcttctttctttttcgacttgtgttgacgagtccttcttct 44683350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 27556944 - 27556814
Alignment:
Q  89 tttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctcc 188  Q
    |||||||||||||||||   || |||| ||||| | | |||||||||  ||||| || |||||||||||||| |||||||||| |||||||||||| | |    
T  27556944 tttttgttacgaactctcgctagaaaaggagagctcgcctcacttatcttttaccccaaaattcacagttgatgcttcatgtgcttttcctctctttttc 27556845  T
Q  189 ctttttcaacttgtgttgacgagtccttctt 219  Q
    ||||||| ||||||||||||||||| |||||    
T  27556844 ctttttcgacttgtgttgacgagtcgttctt 27556814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10160178 - 10160258
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||||||||||||    
T  10160178 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttcttct 10160258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 17968396 - 17968477
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| |||||||    
T  17968396 tacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtctttcttct 17968477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 18345072 - 18344995
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  18345072 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 18344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 24286355 - 24286432
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  24286355 ccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 24286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 24292923 - 24293000
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  24292923 ccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 24293000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 377748 - 377820
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||| |||| |||||||||||||||||    
T  377748 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctctttcgacttgtgttgacgagtc 377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 23068211 - 23068291
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  23068211 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 23068291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 5771271 - 5771176
Alignment:
Q  125 gtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    ||||||||||||||  |||||||||  |||||| || ||||| |||| |||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  5771271 gtctcacttattctgcacaccgaaaaacacagtagatgcttcgtgtgcttttcctctcttctccccctttcgacttgtgttgatgagtccttcttc 5771176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 6297344 - 6297427
Alignment:
Q  135 ttctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||| | |||||||    
T  6297344 ttctatacacagaaattcacagttgatgcttcatgtgcttttcctctcttctccctccttcgacttgtgttgacaaatccttct 6297427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 6856831 - 6856753
Alignment:
Q  143 accgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  6856831 accgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 6856753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 1284150 - 1284070
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  1284150 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 1284070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 30344374 - 30344454
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  30344374 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 30344454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 22845034 - 22844959
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||  ||  ||||||||||| ||||||||||||    
T  22845034 cgaaattcacaattgatgcttcttgtgtttttcctctcttctccctcctttgacttgtgttgatgagtccttcttc 22844959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 9785786 - 9785714
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    |||||||||||||||||||| ||||| |||| ||||  |||||||||||| |||  |||||||||||||||||    
T  9785786 acaccgaaattcacagttgatgcttcctgtgcttttattctcttctccctcttttgacttgtgttgacgagtc 9785714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 42248863 - 42248783
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| |||| |||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  42248863 acaccgaaatacacaattgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 42248783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 7559815 - 7559878
Alignment:
Q  147 aaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacga 210  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||  |||||||| |||||||||    
T  7559815 aaattcacagttgatgcttcctgtgttttttctctcttctccctccttcaacttttgttgacga 7559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 34070055 - 34069975
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| ||||||||| |||||  ||| ||||| ||||| |||||| |||  ||||||||||||||||| |||||||    
T  34070055 acaccgaaatacacagttgatgcttccagtgcttttcttctctcctccctcttttgacttgtgttgacgagtctttcttct 34069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 19891921 - 19891984
Alignment:
Q  155 agttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||| | ||| |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  19891921 agttgatgtttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 19891984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 30658807 - 30658736
Alignment:
Q  147 aaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||  ||| |||||| ||||| | |||||||    
T  30658807 aaattcacagttgatgcttcatatgtttgtcctctcttctccctcattcgacttgtcttgacaaatccttct 30658736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 17327690 - 17327616
Alignment:
Q  147 aaattcacagttgaggcttcatgtgttt-ttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    |||| |||||||||  |||| ||||||| |||||||||||| |||  ||||||||||||||||||||| ||||||    
T  17327690 aaatacacagttgatacttcttgtgtttcttcctctcttcttcctccttcaacttgtgttgacgagtcattcttc 17327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 26897260 - 26897194
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtg-tttttcctctcttctccctttttcaacttgtgttgacg 209  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||||||| ||  |||||||||||||    
T  26897260 ccgaaattcacagttgatgcttcctgtgctttttgctctcttctcccttctttgacttgtgttgacg 26897194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 28855767 - 28855718
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccct 190  Q
    |||||||||||||||||||| | ||| | |||||||||||||||||||||    
T  28855767 acaccgaaattcacagttgatgattcctatgtttttcctctcttctccct 28855718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 25375525 - 25375445
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||| ||||||||||||||| | |||  ||  ||||||||||||||||||  ||| ||||||||||||||||  |||||||    
T  25375525 acactgaaattcacagttgatgattccggtacttttcctctcttctccctccttcgacttgtgttgacgagtttttcttct 25375445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 5089654 - 5089520
Alignment:
Q  89 tttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctcc 188  Q
    |||| |||||||||||||| ||||||| ||||| | | | | || ||||||||||||||| ||   |||||| | ||| |||||  ||||||||||||||    
T  5089654 ttttcgttacgaactcttcctataaaaggagagctcgcccccctcattctttacaccgaattttgaagttgatgattcctgtgtgattcctctcttctcc 5089555  T
Q  189 ctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |   ||| |||| | || ||||||| ||||||||||||    
T  5089554 c---ttcgacttattttaacgagtcattcttctgcttc 5089520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 11658524 - 11658574
Alignment:
Q  16 gaaggttccggatatatccacacacgaaaacaaacgcggtttgttttagag 66  Q
    |||||||||||||||| |||||   |||||||||||| |||||||||||||    
T  11658524 gaaggttccggatataaccacatgagaaaacaaacgcagtttgttttagag 11658574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 42914973 - 42914884
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    |||||||| |||||| ||| ||||||| | ||| ||||   |||||||||||||||||   | ||||||||| ||||||| ||||||||||||    
T  42914973 attctttaaaccgaatttcgcagttgatgattcctgtgcgattcctctcttctccctt---cgacttgtgttaacgagtcattcttctgcttc 42914884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 193725 - 193805
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  193725 acaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 193805  T

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Target: scaffold0015; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 188042 - 188116
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||| ||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| ||||    
T  188042 ccgaaatacacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttct 188116  T

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Target: scaffold1910 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 500 - 422
Alignment:
Q  143 accgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||||| |||||||    
T  500 accgaaattcacagttgatgcttcctgtgtttttcttctcttctccctctttcgacttgtgttgacgagtctttcttct 422  T

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Target: scaffold0061 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 49441 - 49519
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  49441 tacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcccttcttcgacttgtgttgacaagtcgttct 49519  T

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Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 149193 - 149115
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  149193 tacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcccttcttcgacttgtgttgacaagtcgttct 149115  T

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Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 10140755 - 10140677
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||| |||||||||||| |||||||||    
T  10140755 tacaccgaaattcacagttgatgcttcatgtgtttttcttctcttctccctccttcgacttgtgttgacaagtccttct 10140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 41387433 - 41387513
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  41387433 acaccgaaattcacagttgatgcatcatgtgtttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 41387513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 14724571 - 14724504
Alignment:
Q  146 gaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  14724571 gaaattcacagttgatgcttcatgtgcttttcctctcttctacctttttcgacttgtgttgacgagtc 14724504  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 10135986 - 10135909
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||  ||| |||||||||||| |||||||||    
T  10135986 acaccgaaattcacagttgatgcttcctgtgtttttcttctcttctccctccttcgacttgtgttgacaagtccttct 10135909  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 22428656 - 22428733
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  22428656 ccgaaattcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 22428733  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 26927155 - 26927232
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  26927155 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtcattct 26927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 41097416 - 41097493
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  41097416 acaccgaaattcacagttgatgcttcatgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 41097493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 1067113 - 1067037
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||||||||||||||  |||||||    
T  1067113 cgaaattcacagttgatgcttcctgtgtttttcctctcttctccctccttcgacttgtgttgacgagtttttcttct 1067037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16836744 - 16836824
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||| |||  |||||||    
T  16836744 acaccgaaattcacagttgatgcttcatgtgcttttcctctcttctccctccttcgacttgtgttgacaagtttttcttct 16836824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 39243481 - 39243561
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  39243481 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 39243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 39247036 - 39247116
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  39247036 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 39247116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 26199001 - 26198922
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    ||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||  |||||| ||||||||||    
T  26199001 attctgtacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttagacttgtcttgacgagtc 26198922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 18784011 - 18784089
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgt-gtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||||||| |||||| |||  ||||||||||||| | ||||||||||||||||||||    
T  18784011 acaccgaaattcacagttgatgcttcatgtggttttttctccattctccctttttcgaattgtgttgacgagtccttct 18784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 25187995 - 25188125
Alignment:
Q  90 ttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccc 189  Q
    |||||||| |||||||   ||||||| ||||| | |  || |||||||||||||||||||   |||||||| | ||  |||| |||||||||||| ||||    
T  25187995 ttttgttaagaactctcactataaaaggagagctcgcttcgcttattctttacaccgaaaaatacagttgatgttttctgtgcttttcctctcttttccc 25188094  T
Q  190 tttttcaacttgtgttgacgagtccttcttc 220  Q
    | |||| ||||||||||||||||||||||||    
T  25188095 tctttcgacttgtgttgacgagtccttcttc 25188125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 3094725 - 3094648
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  3094725 acaccgaaattcacagttgatacttcctgtgtttttcctctcttctccctccttcgacttgtgttgacaagttcttct 3094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 1924512 - 1924592
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  1924512 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 1924592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 19725363 - 19725431
Alignment:
Q  142 caccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacga 210  Q
    ||||||||||||||||||| ||||| |||| |||||| |||||||||||  ||||||||||||||||||    
T  19725363 caccgaaattcacagttgatgcttcctgtgcttttcccctcttctccctccttcaacttgtgttgacga 19725431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 20923526 - 20923606
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  20923526 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 20923606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 14804137 - 14804060
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||||||| |||||| || ||||||  |||||||    
T  14804137 ccgaaattcacagttgatgattcctgtgcttttcctctcttctccctttttcgacttgtcttaacgagtttttcttct 14804060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 51040949 - 51041022
Alignment:
Q  145 cgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||| | ||  |||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  51040949 cgaaattcacagttgatgttttctgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 51041022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 52100690 - 52100759
Alignment:
Q  152 cacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||| |||||| |||||||||| |||||||    
T  52100690 cacagttgatgattcctgtgtttttcctctcttctcccttcttcgacttgtcttgacgagtctttcttct 52100759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21498287 - 21498207
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||| ||||||||| ||||| |||| ||||  |||||||||||| |||  ||||||||||||||||| |||||||    
T  21498287 acaccgaaatacacagttgatgcttcctgtgctttttttctcttctccctcttttgacttgtgttgacgagtctttcttct 21498207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 13893952 - 13893873
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    |||| |||| |||||||||| ||||| |||||||||||||||||  ||||  ||  ||||||||||||||||||||||||    
T  13893952 acactgaaaatcacagttgatgcttcctgtgtttttcctctctttcccctcctttgacttgtgttgacgagtccttcttc 13893873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 14724727 - 14724680
Alignment:
Q  16 gaaggttccggatatatccacacacgaaaacaaacgcggtttgtttta 63  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  14724727 gaaggttccagatatatccacacacgaaaacaaacgcggattgtttta 14724680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 40232846 - 40232912
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttga 207  Q
    |||||||||||||||||||| ||||| |||  ||||||||||||||||||  ||| |||||||||||    
T  40232846 acaccgaaattcacagttgatgcttcctgtacttttcctctcttctccctccttcgacttgtgttga 40232912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 14819605 - 14819528
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||  ||||| ||||||||||||||||| |||||| || ||||||| |||||||    
T  14819605 ccgaaattcacagttgatgattcttgtacttttcttctcttctccctttttcgacttgtcttaacgagtctttcttct 14819528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 17213901 - 17213982
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||| | |||||| | ||| | |||||||||||||||||||||  ||| ||||||||| ||||||| |||||||    
T  17213901 tacaccgaaatttatagttgatgtttcctatgtttttcctctcttctccctccttcgacttgtgttaacgagtcattcttct 17213982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 2384704 - 2384772
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacg 209  Q
    |||| ||||||||||||||| ||||| |||| ||||| |||||||||||| |||  |||||||||||||    
T  2384704 acacggaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacg 2384772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 33055679 - 33055595
Alignment:
Q  134 attctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||| |||||| |||||||||||||| | ||| |||||||||| ||||||||||||  ||| ||||||||| |  |||||||||    
T  33055679 attctatacaccaaaattcacagttgatgattcttgtgtttttcttctcttctccctccttcgacttgtgtttaaaagtccttct 33055595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 224
Target Start/End: Original strand, 39747002 - 39747134
Alignment:
Q  88 ttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctc 187  Q
    |||||||||||||||||||| ||||||| ||||| | | | | || |||||| |||| ||| ||| ||||||| | ||| ||||   |||||||||||||    
T  39747002 ttttttgttacgaactcttcctataaaaggagagctcgcccccctcattcttcacactgaatttcgcagttgatg-ttcctgtgcgattcctctcttctc 39747100  T
Q  188 cctttttcaacttgtgttgacgagtccttcttctgct 224  Q
    ||   ||| ||||||||| ||||||| ||||||||||    
T  39747101 cc---ttcgacttgtgttaacgagtcattcttctgct 39747134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 2367679 - 2367608
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagt 212  Q
    |||| ||||||||||||||| ||||| |||| ||||| |||||||||||| ||   |||||| |||||||||    
T  2367679 acacggaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttatgacttgtcttgacgagt 2367608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 7882609 - 7882566
Alignment:
Q  178 ctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||| | |||||||||||||||||| |||||||    
T  7882609 ctctcttctccctttcttaacttgtgttgacgagtctttcttct 7882566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 26650882 - 26651019
Alignment:
Q  86 cgttttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttc 185  Q
    ||||||||||||||||||| || || |||| ||||| | | | | || |||||| |||||||| | |||||| || | ||||||||   |||||||||||    
T  26650882 cgttttttgttacgaactcctcctacaaaaggagagctcgcccccctcattcttcacaccgaattccacagtcgatgattcatgtgcgattcctctcttc 26650981  T
Q  186 tccctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||||   ||| |||||| || ||||||| |||| |||||||    
T  26650982 tccc---ttcgacttgtattaacgagtcgttctcctgcttc 26651019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 33684 - 33821
Alignment:
Q  89 tttttgttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctcc 188  Q
    ||||||||||||||| | | ||||||| ||||| |   | |||| |||||| |||| |||||||||| |||| | |||||||| ||||| ||||||||||    
T  33684 tttttgttacgaactatgcctataaaaggagagctcaccccactcattcttaacactgaaattcacatttgatgattcatgtgcttttcgtctcttctcc 33783  T
Q  189 ctttttcaacttgtgttgacgagtccttcttctgcttc 226  Q
    ||  ||| |||||||||||||| |||||||||||||||    
T  33784 ctccttcgacttgtgttgacgattccttcttctgcttc 33821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 64793 - 64716
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  64793 ccgaaattcacagttgatgattcatgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttct 64716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 81191 - 81114
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||| ||| |||||| |||||||||| |||||||    
T  81191 ccgaaattcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttgtcttgacgagtctttcttct 81114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 199826 - 199748
Alignment:
Q  143 accgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  199826 accgaaattcacagttgatgattcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttct 199748  T

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Target: scaffold0357 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 3808 - 3885
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| |||| |||||||||||| |||||||    
T  3808 ccgaaattcacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttatgttgacgagtctttcttct 3885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 19683 - 19752
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    ||||||||||||||||| ||||| |||| |||| |||||||||||||||||| |||||||||||||||||    
T  19683 ccgaaattcacagttgatgcttcctgtgctttttctctcttctccctttttcgacttgtgttgacgagtc 19752  T

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Target: scaffold0132 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 24757 - 24834
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| | ||| |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  24757 ccgaaattcacagttgatgattcctgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttct 24834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 5339 - 5419
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  5339 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 5419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10434 - 10514
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  10434 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 10514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 14935 - 15015
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  14935 acaccgaaattcacagttgatgcttcttgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 15015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 11830 - 11750
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  11830 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 11750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 21943 - 21863
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  21943 acactgaaattcacagttgatgcttcctgtgtttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 21863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 127039 - 126959
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  127039 acaccgaaattcacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 126959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 7418 - 7289
Alignment:
Q  94 gttacgaactcttcatataaaatgagagtttgtctcacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttt 193  Q
    ||||||||||| || ||||||| ||||| | | | | || ||||||||||||||| | |||||| || | ||| ||||   |||||||||||||||   |    
T  7418 gttacgaactcatcctataaaaggagagctcgcccccctcattctttacaccgaattccacagtcgatgattcctgtgcgattcctctcttctccc---t 7322  T
Q  194 tcaacttgtgttgacgagtccttcttctgcttc 226  Q
    || ||||||||| || |||| ||||||||||||    
T  7321 tcgacttgtgttaacaagtcgttcttctgcttc 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 47430 - 47508
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  47430 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 47508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 52374 - 52452
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||||||||||| |||| ||||    
T  52374 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttgtgttgacaagtcgttct 52452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 35161 - 35239
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||| |||| ||||||| |||||||||    
T  35161 tacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctccctccttcgacttatgttgacaagtccttct 35239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 697 - 775
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||  ||| |||||||||||| |||||||||    
T  697 tacaccgaaattcacagttgatgcttcctgtacttttcctctcttctccctccttcgacttgtgttgacaagtccttct 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 22308 - 22231
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| | |||||||||| |||| |||||||    
T  22308 ccgaaattcacagttgatgcttcctgtggttttcctctcttctcccttcttcgatttgtgttgacaagtctttcttct 22231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 12426 - 12506
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||  |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  12426 acaccgaaattcacagttgatgctttctgtgattttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 1124 - 1044
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  1124 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10884 - 10964
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  10884 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 10964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 32043 - 32123
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  32043 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 32123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 13470 - 13550
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  13470 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 13550  T

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Target: scaffold0124 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 21444 - 21524
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  21444 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 21524  T

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Target: scaffold0034 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 121202 - 121122
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| | || ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  121202 acaccgaaattcacagttgatgcttcctatgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 121122  T

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Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 35469 - 35549
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||  |||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  35469 acaccgaaattcacagttgatacttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 35549  T

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Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 9338 - 9416
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtg-tttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||||  ||| |||||||||||| ||| |||||    
T  9338 acaccgaaattcacagttgatgcttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagttcttct 9416  T

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Target: scaffold0991 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 331 - 254
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| |||| |||| || ||||||||||| ||| |||||| |||||||||| |||||||    
T  331 ccgaaattcacagttgatgcttcctgtgctttttctttcttctcccttcttcgacttgtcttgacgagtctttcttct 254  T

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Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 30903 - 30823
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||||||||||||||||||| ||||| | || ||||| |||||||||||| |||  ||||||||| ||||||| |||||||    
T  30903 acaccgaaattcacagttgatgcttcctatgcttttcttctcttctccctcttttgacttgtgttaacgagtctttcttct 30823  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 22345 - 22265
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||||||   ||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  22345 acaccgaaattcacagttgatttttcttgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 22265  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 81430 - 81374
Alignment:
Q  162 gcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttct 218  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  81430 gcttcatgtgtttttcctctcttctccctccttcgacttgtgttgacaagtccttct 81374  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 43439 - 43355
Alignment:
Q  129 cacttattctttacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtc 213  Q
    ||||||||||| |||| ||||| |||| |||| ||||  |||| ||||||||||||||||||  ||||||||||||||| |||||    
T  43439 cacttattcttcacactgaaatacacaattgatgctttctgtgattttcctctcttctccctcattcaacttgtgttgaagagtc 43355  T

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Target: scaffold0628 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 7024 - 6961
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgt 204  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||||  ||| ||||||||    
T  7024 acaccgaaattcatagttgatgcttcatgtgcttttcctctcttctccctccttcgacttgtgt 6961  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 30317 - 30240
Alignment:
Q  144 ccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    ||||||||||||||||| ||||| | || ||||| |||||||||||| |||  ||||||||| ||||||| |||||||    
T  30317 ccgaaattcacagttgatgcttcctatgcttttcttctcttctccctcttttgacttgtgttaacgagtctttcttct 30240  T

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Target: scaffold0292 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 7803 - 7723
Alignment:
Q  141 acaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||| |||||||||| || | ||||| |||| ||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  7803 acacagaaattcacaatttatgcttcctgtgattttcttctcttctccctcttttgacttgtgttgacgagtctttcttct 7723  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 70376 - 70456
Alignment:
Q  141 acaccgaaat-tcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttgacgagtccttcttc 220  Q
    |||||||||| |||||||||| | ||| |||| ||||  ||||||||||||  ||| |||||||||||| |||||||||||    
T  70376 acaccgaaatctcacagttgatgtttcctgtgctttttttctcttctccctccttcgacttgtgttgacaagtccttcttc 70456  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 59063 - 58996
Alignment:
Q  140 tacaccgaaattcacagttgaggcttcatgtgtttttcctctcttctccctttttcaacttgtgttga 207  Q
    |||||||||||||| | |||| ||||| |||| |||||||||||||||| |  ||| |||||||||||    
T  59063 tacaccgaaattcataattgatgcttcctgtgcttttcctctcttctccgtccttcgacttgtgttga 58996  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 29804 - 29756
Alignment:
Q  173 ttttcctctcttctccctttttcaacttgtgttgacgagtccttcttct 221  Q
    |||| ||||||||||||||| |  ||||||||||||||||| |||||||    
T  29804 tttttctctcttctccctttcttgacttgtgttgacgagtctttcttct 29756  T

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