View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11982A_low_462 (Length: 229)

Name: NF11982A_low_462
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11982A_low_462
NF11982A_low_462
[»] chr7 (20 HSPs)
chr7 (1-216)||(21714092-21714307)
chr7 (1-202)||(21651978-21652179)
chr7 (15-224)||(21788152-21788361)
chr7 (1-225)||(21628034-21628258)
chr7 (69-224)||(21646720-21646875)
chr7 (1-224)||(21704552-21704775)
chr7 (4-224)||(21785315-21785538)
chr7 (5-107)||(21763978-21764077)
chr7 (1-224)||(21808181-21808407)
chr7 (4-107)||(21771873-21771976)
chr7 (64-224)||(21681622-21681782)
chr7 (4-107)||(21725808-21725911)
chr7 (1-224)||(21664004-21664230)
chr7 (92-211)||(21745532-21745651)
chr7 (1-191)||(21992079-21992272)
chr7 (64-224)||(15713595-15713755)
chr7 (1-73)||(21741015-21741087)
chr7 (156-224)||(21623257-21623325)
chr7 (156-224)||(21764126-21764194)
chr7 (71-224)||(21791990-21792143)
[»] scaffold0182 (2 HSPs)
scaffold0182 (5-224)||(25223-25442)
scaffold0182 (4-72)||(34446-34514)


Alignment Details
Target: chr7 (Bit Score: 112; Significance: 9e-57; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 21714092 - 21714307
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 100  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  21714092 attatattgaatgaaggatggcatcccaaactattaaagaaaaatttgtggagctacaaaaatcaatgcaaacaccccaaaattcacgaccgaagataca 21714191  T
Q  101 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 200  Q
     ||||||   || | | ||| |||| |||||| |||||||  |||||||   || ||||| |||||||| ||||||||||||||||||||||||||||||    
T  21714192 aagggtggttgaccgtttcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctg 21714291  T
Q  201 aagataggagagaagt 216  Q
    |||| |||||||||||    
T  21714292 aagaaaggagagaagt 21714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21651978 - 21652179
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 100  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  21651978 attatattgattgaatgatggcatcccaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaacaccccaaaattcacgaccaaagataca 21652077  T
Q  101 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 200  Q
     |||||| || |  |||||| |||| |||  | |||||||   |||||||  || ||||| || ||| | ||||||||||||||||||||| ||||| ||    
T  21652078 aagggtgccacagtatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaatatg 21652177  T
Q  201 aa 202  Q
    ||    
T  21652178 aa 21652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 21788152 - 21788361
Alignment:
Q  15 atgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatc 114  Q
    ||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||      
T  21788152 atgatggcatcccaaactattaatgaaaaatttgtggagttacaaaaatcaaagcaaacaccccaaaattcacgaccgaaaatacaaagggtggcagagt 21788251  T
Q  115 atctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaa 214  Q
    |||||| |||| ||| ||  ||||||  |||||||   || |||||| ||||  | ||||||||||||||||||||  ||||| ||||| ||||||||||    
T  21788252 atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa 21788351  T
Q  215 gttcaagctt 224  Q
    || |||||||    
T  21788352 gtacaagctt 21788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21628034 - 21628258
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 100  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||| || || || | |||||||||||||||| |||| ||||||||||||||||    
T  21628034 attatattgaaagaatgatggcatcccaaactattaaagaaaaatttgtggagttaaaaaattcaaagcaaacaccccgaaatgcacgaccaaagataca 21628133  T
Q  101 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 200  Q
     |||||| | |||||||||| ||||  || |  ||||| |  | |||||   || ||||| |||||| | |||||||||||||||| || | ||||||||    
T  21628134 aagggtggccgatcatctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctg 21628233  T
Q  201 aagataggagagaagttcaagcttg 225  Q
    || ||||||||||||| ||||||||    
T  21628234 aacataggagagaagtacaagcttg 21628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 21646720 - 21646875
Alignment:
Q  69 caaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcat 168  Q
    |||||||||||||||||||||||||||||||| |||||| || |  |||||| |||| ||||||  ||||||| ||||||||  || ||||||||||||     
T  21646720 caaacaccccaaaattcacgaccaaagatacaaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaa 21646819  T
Q  169 ttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  21646820 taggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagctt 21646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21704552 - 21704775
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 100  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||  || || || | |||||||||||||| | |||| ||||||||||||||||    
T  21704552 attatattgaatgaatgatggcatcccaaactattaaagaaaaatttgtcgagttaaaaaattcaaagcaaacacctccaaatgcacgaccaaagataca 21704651  T
Q  101 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 200  Q
     ||||||  |||  |||||| || | ||| ||  ||||||  |||||||   || ||||| |||||  | ||||||||||||||||||||||||| ||||    
T  21704652 aagggtgcaagagtatctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctg 21704751  T
Q  201 aagataggagagaagttcaagctt 224  Q
    ||| |||||||||||| |||||||    
T  21704752 aagttaggagagaagtacaagctt 21704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 21785315 - 21785538
Alignment:
Q  4 atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 100  Q
    ||||||||  ||||||| ||||||||||||   || || ||||| ||||| ||||| || | |||||||||| |||||||||||||||||||||||||||    
T  21785315 atattgaatcaatgatgacatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaccaaagataca 21785414  T
Q  101 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 200  Q
     ||||||  |||  |||| | |||| | | ||  ||||||  |||||||   || ||||| |||||| | ||||||||||||||||||||||||||||||    
T  21785415 aagggtgcaagagtatctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctg 21785514  T
Q  201 aagataggagagaagttcaagctt 224  Q
    |||| ||||||||||| |||||||    
T  21785515 aagacaggagagaagtacaagctt 21785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 21763978 - 21764077
Alignment:
Q  5 tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg 104  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||| |||||||| |||    
T  21763978 tattgaatgaatgatggcatcccaaactcttaaagaaaaatttgtggagctacaa---tcaaagcaaacaccccaaaattcacgacccaagatacaaagg 21764074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21808407 - 21808181
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagat 97  Q
    |||||||||||  |||||||| |||||||||||   || || ||||  ||||| ||||| || | ||||| |||| ||||||||||||||||||||||||    
T  21808407 attatattgaatgaatgatggaatcccaaactacccttgaaaaaaagattgtggagctaaaaaattcaaatcaaataccccaaaattcacgaccaaagat 21808308  T
Q  98 acagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaat 197  Q
    ||| |||||| | ||  |||||| |||| |||||| | |||||  |||||||   || |||||||| ||| | ||||||||||||||||  |||  ||||    
T  21808307 acaaagggtggctgagtatctcagaaatagaacaaatcttgagaagcattactcacccaagttggtatcaataggtcctatccatcatggaaatataaat 21808208  T
Q  198 ctgaagataggagagaagttcaagctt 224  Q
    |||||| |||||||||||| |||||||    
T  21808207 ctgaagttaggagagaagtacaagctt 21808181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 21771873 - 21771976
Alignment:
Q  4 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 103  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| |||| |||||||| ||    
T  21771873 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaataccccaaaattcaagaccgaagatacaaag 21771972  T
Q  104 ggtg 107  Q
    ||||    
T  21771973 ggtg 21771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 21681622 - 21681782
Alignment:
Q  64 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 163  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||    || |||||||| ||||||  ||| ||| ||||||||  || ||||| ||    
T  21681622 caaatcaaacaccccaaaattcacgaccaaagatacaaagggtgccacggtatgtcaaaaatagaacaaaatttaaggagcattacagccccaagtttgt 21681721  T
Q  164 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
    |||| | |||||||||||||||| |||| || |||| ||| |||||||||||| |||||||    
T  21681722 gtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagctt 21681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 21725808 - 21725911
Alignment:
Q  4 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 103  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| | ||||||||||| |||| |||||||| ||    
T  21725808 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaatatcccaaaattcaagaccgaagatacaaag 21725907  T
Q  104 ggtg 107  Q
    ||||    
T  21725908 ggtg 21725911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21664004 - 21664230
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagat 97  Q
    |||||||||||  ||||||||||||||||||||   || || ||||| ||||| ||||| || | |||||||||| |||||||| |||||||||||||||    
T  21664004 attatattgaaagaatgatggcatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaagttcacgaccaaagat 21664103  T
Q  98 acagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaat 197  Q
    ||| |||||| || |  |||||| |||  ||| ||  ||||||  | |||||   || |||||  ||||| | |||||||||||||||| |||| || ||    
T  21664104 acaaagggtgccacacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagat 21664203  T
Q  198 ctgaagataggagagaagttcaagctt 224  Q
    |||||| |||||| ||||| |||||||    
T  21664204 ctgaagttaggagggaagtacaagctt 21664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 21745532 - 21745651
Alignment:
Q  92 aaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 191  Q
    ||||||||| ||||||  ||| ||||||| |||| |||||| |||||||  |||||||   || |||||||||||||| |||||||||||||||||||||    
T  21745532 aaagatacaaagggtggtagaccatctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaat 21745631  T
Q  192 ccaaatctgaagataggaga 211  Q
    |||||||| |||| ||||||    
T  21745632 ccaaatctaaagacaggaga 21745651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 21992079 - 21992272
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagat 97  Q
    |||||||||||  |||||||||||||||||||    || |||||||| ||||| ||||| || | |||||||||| |||||||||||||||| || ||||    
T  21992079 attatattgaatgaatgatggcatcccaaacttcccttgaagaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaacacagat 21992178  T
Q  98 acagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 191  Q
    ||| |||||| ||||  ||||||||||| ||| |   ||||||  ||| |||   || || ||||||||| | |||||||||||||||| ||||    
T  21992179 acaaagggtggcagagtatctcaaaaatagaaaagactttgagaagcactactcacccaaattggtgtcaataggtcctatccatcatggcaat 21992272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 15713595 - 15713755
Alignment:
Q  64 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 163  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||   |||||| |||  | | || || |||| ||||||||   || ||||||||    
T  15713595 caaagcaaacaccccaaagttcacgaccaaagatacaaagggtgccaggctatctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggt 15713694  T
Q  164 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
     ||| | || |||||||||||||||||| ||||||| |||  ||| ||||||| |||||||    
T  15713695 ttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagctt 15713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21741015 - 21741087
Alignment:
Q  1 attatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaac 73  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||    
T  21741015 attatattgaatgaatgatggcatcccaaactattaaagaaaaaattgtggagctacaaaaattaaagcaaac 21741087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 21623257 - 21623325
Alignment:
Q  156 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  21623257 aagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagctt 21623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 21764126 - 21764194
Alignment:
Q  156 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
    |||||| ||||| | |||||||||||||||||||   || |||||||| |||||||||||| |||||||    
T  21764126 aagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagctt 21764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 21791990 - 21792143
Alignment:
Q  71 aacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcattt 170  Q
    |||||||| || ||||  |||||||||||| |||||| ||||  |||||| |||  ||  || |||||||  ||||||||| || | ||| || ||| |     
T  21791990 aacacccccaagttcaaaaccaaagatacaaagggtggcagagtatctcagaaagagagaaaattttgagaagcattacatcccaaggtttgtatcaata 21792089  T
Q  171 ggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 224  Q
    ||||| |||||||||| || | || ||||| || |||||||||||| |||||||    
T  21792090 ggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagctt 21792143  T

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Target: scaffold0182 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 25223 - 25442
Alignment:
Q  5 tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg 104  Q
    |||||||  |||||||||| |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||    
T  25223 tattgaatgaatgatggcagcccaaactcttaaagaaaaaattgaggagctacaaaaatcaaagcaaacaccccaaaattcaccacccaagatacaaagg 25322  T
Q  105 gtgacagatcatctcaaaaatcgaacaagttttgagg-tgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaag 203  Q
    ||| || || | | || |||   | |||  |||||||  | | ||||  || |||||||||||| | |||||||||||||||||||||  ||||||||||    
T  25323 gtggcatattaccgcagaaagataccaa-atttgaggaagtactacaaacccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaag 25421  T
Q  204 ataggagagaagttcaagctt 224  Q
     |||||||||||| |||||||    
T  25422 ttaggagagaagtacaagctt 25442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 34446 - 34514
Alignment:
Q  4 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaa 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||    
T  34446 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaa 34514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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