View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11982A_low_79 (Length: 373)
Name: NF11982A_low_79
Description: NF11982A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982A_low_79 |
 | |
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| [»] chr3 (3 HSPs) |
| |
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| [»] scaffold0015 (1 HSPs) |
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| [»] chr8 (1 HSPs) |
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| [»] chr7 (2 HSPs) |
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| [»] chr6 (1 HSPs) |
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| [»] chr1 (4 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 353; Significance: 0; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 5381618 - 5381246
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5381618 |
atgaaccagaaaaagaagaagttttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
5381519 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5381518 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagatagtggtagt |
5381419 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5381418 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttagagatgccaacacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
5381319 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5381318 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
5381246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 13721385 - 13721016
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13721385 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgttgatcatggcgagtctctggtgatcagacgaagcctacacgc |
13721286 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
13721285 |
gatgtcagctcaagaagagcattggttgaggaaaaacattttccatactcgttgcaccactactggaaaggtttgtgatgttataatagacagtggtagt |
13721186 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13721185 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttagagatgccagcacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
13721086 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtg |
370 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13721085 |
aagtgatggttacgaagtgtttccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtg |
13721016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 24341682 - 24341603
Alignment:
| Q |
79 |
tgatcagacgaagcctacacacgatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcacc |
158 |
Q |
| |
|
|||||| | |||| ||||||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
24341682 |
tgatcataggaaggctacacatgatgtcagcacaagaagagcattacttgaggaaaaacatttttcatactcgttgcacc |
24341603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 27800 - 27428
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
27800 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacgc |
27701 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27700 |
gatgtcagctcaagaagagcattggttgaggaaaaacattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagacagtggtagt |
27601 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27600 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttagagatgccaacacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
27501 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27500 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
27428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 88289 - 88661
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
88289 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacgc |
88388 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
88389 |
gatgtcagctcaagaagagcattggttgaggaaaaacattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagacagtggtagt |
88488 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
88489 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttagagatgccaacacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
88588 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
88589 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
88661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 11713143 - 11713515
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
11713143 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacgc |
11713242 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11713243 |
gatgtcagctcaagaagagcattggttgaggaaaaacattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagacagtggtagt |
11713342 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11713343 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttagagatgccaacacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
11713442 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11713443 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
11713515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 9 - 373
Target Start/End: Original strand, 13162360 - 13162724
Alignment:
| Q |
9 |
gaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacacgatgtcag |
108 |
Q |
| |
|
|||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
13162360 |
gaaaaagatgtagagttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgttcagacgaagcctacacgcgatgtcag |
13162459 |
T |
|
| Q |
109 |
ctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagttgtgaaaa |
208 |
Q |
| |
|
| ||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13162460 |
cccaagaagagcattggttgacgaaaaacatcatccatactcgttgcaccactgctggaaaagtttgtgatattataatagatagtggtagttgtgaaaa |
13162559 |
T |
|
| Q |
209 |
tgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtgaagtgaag |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
13162560 |
tgtggtgtcgaactacatggtagagaagttagagatgccaacacaaagtcatcttcatccttacaaactacaatggctcaacaaagttagtgaagtgaag |
13162659 |
T |
|
| Q |
309 |
gttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
||||| || | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13162660 |
gttacaaatcattgccttgtgaatttttccattggtcagaagtatcaagatcaagtttggtgtga |
13162724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 16776042 - 16775670
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
16776042 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgaatctctagtgataagacgaagcctacacac |
16775943 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16775942 |
gatgtcagctcaagaagagcattggttgaggaaaaacattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagatagtggtagt |
16775843 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16775842 |
tttgaaaatgtggtgtcgaactacatggtagagaagttacagatgccaacagaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
16775743 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16775742 |
aagtgaaggttacgaagcgttgccttatgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
16775670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 325; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 14475148 - 14474776
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14475148 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacgc |
14475049 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14475048 |
gatgtcagctcaagaagagcattggttgagcaaaaacatttttcatactcgttgcaccactgctggaaaagtttgtgatgttataatagacagtggtagt |
14474949 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14474948 |
tgtgaaaatgtggtgtcgaactacatggtagagaatttagagatgccagcacaaagtcatcctcatccttacaaactacaatggctcaacaaaggtagtg |
14474849 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
14474848 |
aagtgaaggttacgaagtgttgccttgtgagtttttccattggtcagaagtatcaagatcaagtttggtgtga |
14474776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 373
Target Start/End: Complemental strand, 2795398 - 2795026
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
2795398 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctagtgatcagacgaagcctacacgc |
2795299 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2795298 |
gatgtcagctcaagaagaacatttgttgaggaaaaacattttccatactcgttgcaccactgccggaaaagtttgtgatgttataatagacagtggtagt |
2795199 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggtagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
2795198 |
tgtgaaaatgtggtgtcgaactacatggtggagaagttagagatgccagcacaaagtcatcatcatccttacatactacaatggctcaacaaaggtagtg |
2795099 |
T |
|
| Q |
301 |
aagtgaaggttacgaagcgttgccttgtgagtttttccattggtcagaagtatccagatcaagtttggtgtga |
373 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
2795098 |
aagtgaaggttacgaagcgttgtcttgtgagtttttccattggtcagaagtatcaagatcaaatttggtgtga |
2795026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 42377161 - 42377399
Alignment:
| Q |
1 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctggtgatcagacgaagcctacacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
42377161 |
atgaaccagaaaaagaagaagtgttagagccaatttatgatgaagagctcattgttgctgatcatggcgagtctctagtgatcagacgaagcctacacgc |
42377260 |
T |
|
| Q |
101 |
gatgtcagctcaagaagagcattggttgaggaaaaatattttccatactcgttgcaccattgctggaaaagtttgtgatgttataatagatagtggtagt |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42377261 |
gatgtcagctcaagaagagtattggttgaggaaaaacattttccatactcgttgcaccactgctggaaaagtttgtgatgttataatagatagtggtagt |
42377360 |
T |
|
| Q |
201 |
tgtgaaaatgtggtgtcgaactacatggtagagaagtta |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42377361 |
tgtgaaaatgtggtgtcgaactacatggtagagaagtta |
42377399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 4670128 - 4670018
Alignment:
| Q |
197 |
tagttgtgaaaatgtggtgtcgaactacatggtagagaagttaaagatgccaacacaaagtcatcctcatccttacaaactacaatggcttaacaaaggt |
296 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||| || || ||| || | |||| |||| |||||| ||| | |||| ||||||| |||||||||| | |
|
|
| T |
4670128 |
tagttgtgagaatgtggtgtctaactatatggtcgataaattagagcttccaaaccaaaatcatccatatctatgcaaattacaatgacttaacaaagtt |
4670029 |
T |
|
| Q |
297 |
agtgaagtgaa |
307 |
Q |
| |
|
||||||||||| |
|
|
| T |
4670028 |
agtgaagtgaa |
4670018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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