View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11982_high_30 (Length: 210)
Name: NF11982_high_30
Description: NF11982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11982_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 623399 - 623220
Alignment:
| Q |
16 |
ctttttggttcatattagattttttccatgttgatctaccgatgtattctgaaaatattttatgaatcaaaacagttattcgaatgtacatatttgacaa |
115 |
Q |
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| T |
623399 |
ctttttggttcatattagattttttccatgttgatctaccgatgtattctgaaaatattttatgaatcaaaacagttattcgaatgtacatatttgacaa |
623300 |
T |
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| Q |
116 |
aaactgccaaggatttttagaaattaaagaatctatacaatttaagttgtcagaaatctgttcatattttagcatctgtg |
195 |
Q |
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| T |
623299 |
aaactgccaaggatttttagaaattaaagaatctatacaatttaagttgtcagaaatctgttcgtattttagcatctgtg |
623220 |
T |
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