View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11985_low_16 (Length: 267)
Name: NF11985_low_16
Description: NF11985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11985_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 27587634 - 27587376
Alignment:
| Q |
1 |
tttgttgttagtaatatgtgatgatgatttttattataaattccttacagaattgtattgcccggcacaaaccacatatattcagtggttacaaagatgt |
100 |
Q |
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| T |
27587634 |
tttgttgttagtaatatgtgatgatgatttttattataaattccttacagaattgtattgcccggcacaaaccacatatattcagtggttacaaagatgt |
27587535 |
T |
|
| Q |
101 |
atgcccatgctaatgaagccctgttcgcttcatgaagcttaaccaggatatatttggtgtcccaattcattaacttcttctatggtgagaagatgtctca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27587534 |
atgcccatgctaatgaagccctgttcgcttcatgaagcttaaccaggatatatttggtgtcccaattcattaacttcttctatggtgagaagatgtctca |
27587435 |
T |
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| Q |
201 |
cttgtaaattcagaagctaggattattcttgttccgagttaagagtctgagtctgtgct |
259 |
Q |
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| T |
27587434 |
cttgtaaattcagaagctaggattattcttgttccgagttaagagtctgagtcagtgct |
27587376 |
T |
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