View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11985_low_4 (Length: 634)
Name: NF11985_low_4
Description: NF11985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11985_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 595; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 595; E-Value: 0
Query Start/End: Original strand, 11 - 621
Target Start/End: Original strand, 103626 - 104236
Alignment:
| Q |
11 |
cacagagatcattgtttgacaggtctctgcacagcacatgaaaataattagccaaatgaattataagagctaggtggagtggagaagctcgaataagata |
110 |
Q |
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| T |
103626 |
cacagagatcattgtttgacaggtctctgcacagcacatgaaaataattagccaaatgaattataagagctaggtggagtggagaagctcgaataagata |
103725 |
T |
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| Q |
111 |
agagactcacaaaatcttgagatttttcagtttagtgagttcccttggtattcttcctgtcagcttgttgttgttgagtcgcctgcatagcatcatataa |
210 |
Q |
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| T |
103726 |
agagactcacaaaatcttgagatttttcagtttagtgagttcccttggtattcttcctgtcagcttgttgttgttgagtcgcctgcatagcatcatataa |
103825 |
T |
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| Q |
211 |
tatattttacgatcaaagaaagttgtgtccaccgacacatgtgattacattcaatgaaagaatcaagtgtctcatattattatctgcgccgacttgtctc |
310 |
Q |
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| T |
103826 |
tatattttacgatcaaagaaagttgtgtccatcgacacatgtgattacattccatgaaagaatcaagtgtctcatattattatctgcgccgacttgtctc |
103925 |
T |
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| Q |
311 |
cgtgtcagtgtcagggcttcatagctcaatcacgtatttaattcttgtgaataaattgtaataacttacaagaatttgatattagagaggttagagaggg |
410 |
Q |
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| T |
103926 |
cgtgtcagtgtcagcgcttcatagctcaatcacgtatttaattcttgtgaataaattgtaataacttacaagaatttgatattagagaggttagagaggg |
104025 |
T |
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| Q |
411 |
tgggagggatagaggcagtgagattgttgtggtaaagacccaagctaattaggttcttcaggtttccaagctcttttggtattggacccaccaattcatt |
510 |
Q |
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| T |
104026 |
tgggagggatagaggcagtgagattgttgtggtaaagacccaagctaattaggttcttcaggtttccaagctcttttggtattggacccaccaattcatt |
104125 |
T |
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| Q |
511 |
cttgtacaattctctgcaatcaacaatattaatcaatttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaaga |
610 |
Q |
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| T |
104126 |
ctcgtacaattctctgcaatcaacaatattaatcaatttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaaga |
104225 |
T |
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| Q |
611 |
tggtgaaggtt |
621 |
Q |
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| T |
104226 |
tggtgaaggtt |
104236 |
T |
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