View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11990_low_6 (Length: 486)
Name: NF11990_low_6
Description: NF11990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11990_low_6 |
 |  |
|
| [»] scaffold0157 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 147; Significance: 3e-77; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 154 - 332
Target Start/End: Complemental strand, 47118491 - 47118313
Alignment:
| Q |
154 |
cacgtcatttcaccatattttttatcaacttgttgatgaatggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatat |
253 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47118491 |
cacgtcatttcaccatattttttatcaactagttgatgaatggacaaaaaccgtcaatttttaaaatagaaggatcaattatgtagattggtgaaaatat |
47118392 |
T |
 |
| Q |
254 |
ggggaccaaaactgcaattaaacctagtttatatgatatgtactatattattgtagttattgaaaaaatatagttatga |
332 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
47118391 |
ggggactaaaactgcaattaagtctaatttatatgatatgtactatattattgttgttattgaaaaaatatagttatga |
47118313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 47118623 - 47118555
Alignment:
| Q |
21 |
tcgatcgtattttacaactaaaaatttataatttgatatgttttaaatgacgtgatatatgatctcgtg |
89 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
47118623 |
tcgatcgtattttagaactaaaaatttgtaatttgatatgttttaaataacgtgatatatgatctcgtg |
47118555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 29366607 - 29366686
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
|||| |||||||| |||||||||| | ||||||| || | |||| |||||||| |||||||||||||||||||| |||| |
|
|
| T |
29366607 |
aaaattgtcaaatattaaaatagaggaatcaattttgcaaattgatgaaaatagagggaccaaaactgcaattaagccta |
29366686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 36742208 - 36742302
Alignment:
| Q |
185 |
gttgatgaatggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||||| | ||| ||||| || | |||| |||||||| ||||| |||| | ||||||| |||| |
|
|
| T |
36742208 |
gttgatgaaaggaccaaaactgttaaattttaaaatatagggaccaattttgcaaattgatgaaaatagggggattaaaattacaattaagccta |
36742302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 37327370 - 37327293
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaacc |
277 |
Q |
| |
|
|||| |||| ||||||||||||| ||| || || || | | ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
37327370 |
aaaattgtcgaattttaaaatagggggaccatttctgcaaaatggtgaaaatagggggatcaaaactgcaattaaacc |
37327293 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 377
Target Start/End: Complemental strand, 47118297 - 47118268
Alignment:
| Q |
348 |
ataatttgaaagtcacaattatctatactt |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
47118297 |
ataatttgaaagtcacaattatctatactt |
47118268 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 15061536 - 15061449
Alignment:
| Q |
187 |
tgatgaatggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||| | | | || ||||||||||| || ||||||||||||||| |
|
|
| T |
15061536 |
tgatgaatggaccaaaactgtcaaattttaaaataggaggatcaattctacaaaatgatgaaaatatggagatcaaaactgcaattaa |
15061449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 42508333 - 42508251
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaacc |
277 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||| || || |||| | ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
42508333 |
ggaccaaaactgtcgaattttaaaatagggggaccatttctgtaaaatggtgaaaataggaggaccaaaactgcaattaaacc |
42508251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 43344885 - 43344793
Alignment:
| Q |
187 |
tgatgaatggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
||||||| |||| ||| ||||| ||||||||||||| ||| ||||| || | | | ||||||||||| |||||||| ||||||||| |||| |
|
|
| T |
43344885 |
tgatgaagggaccaaacctgtcgaattttaaaatagggggaccaattctgcaaaataatgaaaatatggagaccaaaattgcaattaagccta |
43344793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 43670760 - 43670696
Alignment:
| Q |
210 |
aattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
||||||||||||| |||| ||||| || | | ||||||||| ||||||||||||||||||||| |
|
|
| T |
43670760 |
aattttaaaataggaggaccaattttgcaaaagagtgaaaatagggggaccaaaactgcaattaa |
43670696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 38216338 - 38216416
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaacct |
278 |
Q |
| |
|
|||| |||| ||||||||||||| ||| |||||||| | | ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
38216338 |
aaaagtgtcgaattttaaaatagggggaccaattatgcaaaatggtgaaaatagggggaccaaaactgcaattaaacct |
38216416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 39450693 - 39450614
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| || | | ||||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
39450693 |
aaaactgtcaaattttaaaatagggggaccaattctgcaaaatggtgaaaatagggggacaaaaactgcaattaagccta |
39450614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 14742003 - 14741939
Alignment:
| Q |
210 |
aattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
||||||||| |||| ||| ||||| || | | ||||||||||| ||||||||||||||||||||| |
|
|
| T |
14742003 |
aattttaaattagagggaccaattttgcaaagtggtgaaaatagggggaccaaaactgcaattaa |
14741939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 25189648 - 25189727
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||| |||||||| ||||||||||||| ||| ||||| || | | |||| |||||| ||||||||||||||||||||| |
|
|
| T |
25189648 |
ggaccaaaactgttgaattttaaaatagggggaccaattctgcaaaatggtaaaaatagggggaccaaaactgcaattaa |
25189727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 38018458 - 38018537
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||| |||| ||||||||||||||||||| || ||||| | || | || ||||||| ||||||||||||||||||||| |
|
|
| T |
38018458 |
ggaccaaaattgtcaaattttaaaatagagagaccaattctataaaatgaagaaaatagggggaccaaaactgcaattaa |
38018537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 864412 - 864372
Alignment:
| Q |
187 |
tgatgaatggacaaaaactgtcaaattttaaaatagaagga |
227 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
864412 |
tgatgaaaggatgaaaactgtcaaattttaaaatagaagga |
864372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 49726481 - 49726401
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaa |
275 |
Q |
| |
|
|||| ||||||||||||||||||||||| | ||||||| | || | || |||||||| |||| |||||||| ||||||| |
|
|
| T |
49726481 |
ggaccaaaactgtcaaattttaaaataggaaaatcaattctataaaatgatgaaaataaagggatcaaaactgtaattaaa |
49726401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 18879339 - 18879423
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
|||| |||| |||||||||||||| ||| |||||||||||| | | ||||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
18879339 |
ggaccaaaattgtcaaattttaaattagggggatcaattatgcaaaatggtgaaaatagggggaccaaaattgcaattaagccta |
18879423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 12499093 - 12499018
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaa |
270 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||| ||||| || | | ||||||||||| ||||| ||||||||||| |
|
|
| T |
12499093 |
ggaccaaaactgtcgaattttaaaatagggggaccaattctgcaaaatggtgaaaatagggggatcaaaactgcaa |
12499018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 44362943 - 44362906
Alignment:
| Q |
242 |
tggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
44362943 |
tggtgaaaatagggggaccaaaactgcaattaagccta |
44362906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 30017563 - 30017607
Alignment:
| Q |
36 |
aactaaaa-atttataatttgatatgttttaaatgacgtgatata |
79 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
30017563 |
aactaaaatattgataatatgatatgttttaaatgacgtgatata |
30017607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 44363374 - 44363458
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
|||| |||| |||| ||||||||||||| ||| ||||| | | | || |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
44363374 |
ggaccaaaattgtcgaattttaaaatagggggaccaatttcgcaaaatgatgaaaataaggggaccaaaactgcaattaagccta |
44363458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 14626275 - 14626197
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaacct |
278 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||| |||| | ||||||||| ||||||||||||| |||||||||| |
|
|
| T |
14626275 |
aaaactgtcaaattttaaaataggaggaccaattctgtaaaaaagtgaaaataaagggaccaaaactgtaattaaacct |
14626197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 12619665 - 12619713
Alignment:
| Q |
36 |
aactaaaaatttataatttgatatgttttaaatgacgtgatatatgatc |
84 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
12619665 |
aactaaaaatttgtaatttgatatgttttaaataacgagatatatgatc |
12619713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 35021046 - 35020972
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
||||||||| |||||||||||||| ||| || ||||||| | ||||||||||| | |||| |||||| ||||||| |
|
|
| T |
35021046 |
aaaactgtcgaattttaaaatagagggaccatttatgtaaaatggtgaaaataagaggactaaaactacaattaa |
35020972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 40609913 - 40609987
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||| |||| | | ||||||||| | ||||||||||||||||||| |
|
|
| T |
40609913 |
aaaactctcaaattttaaaatagggggaccaattctgtaaaattgtgaaaataggaggaccaaaactgcaattaa |
40609987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 1602727 - 1602637
Alignment:
| Q |
186 |
ttgatgaatggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaacc |
277 |
Q |
| |
|
|||||| | |||| |||||||||||||||||||| | | ||||||||| | | | ||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
1602727 |
ttgatggagggaccaaaactgtcaaattttaaaaca-agggatcaattccgcaaaatggtgaaaatagggagactaaaactgcaattaaacc |
1602637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 36632890 - 36632968
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
||||||||| || ||||||||| | ||||||||| || ||| |||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
36632890 |
aaaactgtcgaactttaaaatatagggatcaattctgcagaatggtaaaaata-ggggactaaaactgcaattaaaccta |
36632968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 3207697 - 3207618
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||| |||| |||| |||||||||||||| || ||||| |||| | || |||||||||| ||||||||||| ||||||| |
|
|
| T |
3207697 |
ggactaaaattgtcgaattttaaaatagagagaccaattttgtaaaatgatgaaaatatgaggaccaaaactacaattaa |
3207618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 20771681 - 20771760
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
|||| ||| ||||||||||||||| ||| ||||| || | | || |||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
20771681 |
aaaaatgttaaattttaaaatagagggaccaattttgcaaaatgatgaaaatagggggaccaaaactacaattaagccta |
20771760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 20781475 - 20781554
Alignment:
| Q |
200 |
aaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaaaccta |
279 |
Q |
| |
|
|||| ||| ||||||||||||||| ||| ||||| || | | || |||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
20781475 |
aaaaatgttaaattttaaaatagagggaccaattttgcaaaatgatgaaaatagggggaccaaaactacaattaagccta |
20781554 |
T |
 |
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Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 21384 - 21459
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaa |
270 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||| ||||| || | | ||||||||||| ||||| ||||||||||| |
|
|
| T |
21384 |
ggaccaaaactgtcgaattttaaaatagggggaccaattctgcaaaatggtgaaaatagggggatcaaaactgcaa |
21459 |
T |
 |
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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 28587694 - 28587615
Alignment:
| Q |
195 |
ggacaaaaactgtcaaattttaaaatagaaggatcaattatgtagattggtgaaaatatggggaccaaaactgcaattaa |
274 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||| ||| | || | | ||||||||| | ||||||||||||||||||||| |
|
|
| T |
28587694 |
ggacgaaaactgtcgaattttaaaatagggggaccaaatttgcaaaatggtgaaaacagggggaccaaaactgcaattaa |
28587615 |
T |
 |
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