View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11992_high_22 (Length: 317)
Name: NF11992_high_22
Description: NF11992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11992_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 26 - 302
Target Start/End: Original strand, 8977232 - 8977507
Alignment:
| Q |
26 |
agaaaattgtgagagatgttaacaaattaaaacatctatatttttaaacttctttaaaaaatagttgtctttgtattttatttgtattctatctttcaca |
125 |
Q |
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| T |
8977232 |
agaaaattgtgagagatgttaacaaattaaa-catctatatttttaaacttctttaaaaaatagttttcattgtattttatttgtattctatctttcaca |
8977330 |
T |
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| Q |
126 |
taaaaaa-cacttttatttcttttcgaaagctagagttttcttgatataagacaagaacactctagattattgaagaagtacacgtgcccaaaggcaagc |
224 |
Q |
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| T |
8977331 |
taaaaaaacacttt-attttttttcgaaaattagagttttcttgatataagagaagaacaccctagattattgaagaagtacacgtgcccaaaggcaagc |
8977429 |
T |
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| Q |
225 |
taagtttgactagcttgatgtaaaaatcaccacaaaacattaagcaaatttacgtgtgggatatgtacatgtttgtgt |
302 |
Q |
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| T |
8977430 |
taagtgtgactagcttgatgtaaaaatcaccacaaaatattaagcaaatttacgtgtgggatatgtacatgtttgtgt |
8977507 |
T |
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