View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11992_high_3 (Length: 775)

Name: NF11992_high_3
Description: NF11992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11992_high_3
NF11992_high_3
[»] chr1 (50 HSPs)
chr1 (253-702)||(44684832-44685285)
chr1 (5-211)||(44685327-44685543)
chr1 (456-565)||(44662558-44662669)
chr1 (12-87)||(22077574-22077648)
chr1 (5-87)||(44290897-44290978)
chr1 (14-87)||(66553-66625)
chr1 (7-87)||(41156996-41157075)
chr1 (8-87)||(24600389-24600467)
chr1 (14-76)||(66168-66230)
chr1 (5-87)||(5320037-5320118)
chr1 (5-87)||(17294582-17294663)
chr1 (5-87)||(26661594-26661675)
chr1 (5-87)||(41142377-41142458)
chr1 (5-87)||(44290530-44290611)
chr1 (14-87)||(3537228-3537300)
chr1 (6-67)||(22077183-22077243)
chr1 (5-86)||(24132057-24132137)
chr1 (8-87)||(32594791-32594869)
chr1 (5-87)||(3550725-3550806)
chr1 (5-87)||(41157380-41157461)
chr1 (5-87)||(41184497-41184578)
chr1 (14-87)||(21378122-21378194)
chr1 (14-87)||(50052104-50052176)
chr1 (8-88)||(3537674-3537753)
chr1 (15-86)||(5575110-5575180)
chr1 (4-87)||(22077899-22077981)
chr1 (8-87)||(39066275-39066353)
chr1 (16-87)||(45084387-45084457)
chr1 (9-87)||(22793283-22793360)
chr1 (5-87)||(29798204-29798285)
chr1 (5-87)||(34364930-34365011)
chr1 (5-87)||(40082412-40082492)
chr1 (5-82)||(3875403-3875479)
chr1 (23-87)||(34364512-34364575)
chr1 (20-87)||(37556116-37556183)
chr1 (7-65)||(4956218-4956275)
chr1 (5-87)||(26661970-26662051)
chr1 (5-87)||(30630710-30630791)
chr1 (21-87)||(31767249-31767314)
chr1 (5-87)||(48588560-48588641)
chr1 (30-87)||(34649443-34649499)
chr1 (14-87)||(37850681-37850753)
chr1 (7-87)||(1188662-1188741)
chr1 (21-87)||(9955912-9955978)
chr1 (25-87)||(11977285-11977346)
chr1 (21-87)||(37555735-37555800)
chr1 (5-87)||(41759488-41759569)
chr1 (9-82)||(5528830-5528902)
chr1 (15-84)||(14318875-14318943)
chr1 (14-87)||(38804436-38804508)
[»] chr4 (51 HSPs)
chr4 (462-570)||(29339642-29339750)
chr4 (8-87)||(16888889-16888967)
chr4 (462-557)||(29352804-29352899)
chr4 (5-87)||(36629242-36629323)
chr4 (8-87)||(3244524-3244602)
chr4 (5-87)||(41370362-41370443)
chr4 (14-87)||(2740705-2740777)
chr4 (8-87)||(49076521-49076599)
chr4 (5-87)||(52884892-52884973)
chr4 (23-87)||(16889624-16889687)
chr4 (16-87)||(2741076-2741146)
chr4 (5-87)||(760194-760275)
chr4 (5-87)||(4955387-4955468)
chr4 (5-87)||(34646719-34646800)
chr4 (5-87)||(39792930-39793011)
chr4 (5-87)||(52884700-52884781)
chr4 (21-87)||(54741264-54741329)
chr4 (5-87)||(55933194-55933275)
chr4 (5-85)||(50630825-50630904)
chr4 (5-77)||(54108928-54108999)
chr4 (20-87)||(10245925-10245991)
chr4 (8-87)||(41707537-41707615)
chr4 (5-87)||(25483341-25483422)
chr4 (5-87)||(49880165-49880246)
chr4 (5-87)||(54017665-54017746)
chr4 (14-87)||(39404403-39404475)
chr4 (8-77)||(45496820-45496888)
chr4 (21-82)||(54343087-54343147)
chr4 (5-87)||(22028031-22028112)
chr4 (5-87)||(32941193-32941274)
chr4 (5-87)||(36572024-36572105)
chr4 (8-86)||(51768133-51768210)
chr4 (5-86)||(1731717-1731797)
chr4 (5-86)||(20826223-20826303)
chr4 (14-87)||(44620665-44620737)
chr4 (5-87)||(49302909-49302992)
chr4 (14-86)||(20825842-20825913)
chr4 (5-41)||(31691202-31691238)
chr4 (15-87)||(50002431-50002502)
chr4 (16-87)||(3341133-3341203)
chr4 (25-84)||(44620304-44620362)
chr4 (8-83)||(44621011-44621085)
chr4 (5-87)||(3340812-3340893)
chr4 (5-87)||(22183334-22183415)
chr4 (9-87)||(34004658-34004734)
chr4 (5-83)||(44620362-44620439)
chr4 (9-87)||(50459726-50459803)
chr4 (21-79)||(54017788-54017845)
chr4 (15-77)||(54108551-54108612)
chr4 (22-87)||(3700370-3700434)
chr4 (10-87)||(39404023-39404099)
[»] chr2 (43 HSPs)
chr2 (5-87)||(41283547-41283628)
chr2 (5-87)||(28254309-28254390)
chr2 (5-87)||(28531386-28531467)
chr2 (8-87)||(962603-962681)
chr2 (5-87)||(6421390-6421471)
chr2 (5-87)||(36178677-36178758)
chr2 (5-86)||(40679701-40679781)
chr2 (5-87)||(5542697-5542778)
chr2 (5-87)||(14745739-14745820)
chr2 (5-87)||(15880268-15880349)
chr2 (5-87)||(31899498-31899579)
chr2 (5-87)||(36005952-36006032)
chr2 (5-87)||(37105929-37106010)
chr2 (9-87)||(37106193-37106270)
chr2 (5-87)||(42514654-42514735)
chr2 (16-87)||(7598614-7598684)
chr2 (5-87)||(16542454-16542535)
chr2 (14-87)||(38796299-38796371)
chr2 (14-87)||(40733522-40733594)
chr2 (21-81)||(40163461-40163520)
chr2 (5-87)||(5543070-5543151)
chr2 (10-87)||(1769897-1769973)
chr2 (14-87)||(6712981-6713053)
chr2 (14-87)||(38796701-38796773)
chr2 (5-84)||(37895133-37895211)
chr2 (5-87)||(7598233-7598314)
chr2 (5-87)||(35580796-35580876)
chr2 (8-85)||(15511570-15511646)
chr2 (5-87)||(31468822-31468899)
chr2 (14-87)||(37632678-37632750)
chr2 (5-86)||(37894764-37894844)
chr2 (23-87)||(29676908-29676971)
chr2 (5-76)||(28254184-28254254)
chr2 (8-87)||(33561526-33561604)
chr2 (8-87)||(36178344-36178422)
chr2 (24-87)||(40733888-40733950)
chr2 (46-84)||(9231257-9231295)
chr2 (5-87)||(12529100-12529181)
chr2 (5-87)||(30323469-30323550)
chr2 (5-87)||(33731653-33731734)
chr2 (5-86)||(14745366-14745446)
chr2 (5-74)||(36178243-36178311)
chr2 (46-87)||(36785675-36785716)
[»] chr6 (35 HSPs)
chr6 (5-87)||(10074435-10074516)
chr6 (5-87)||(3409264-3409345)
chr6 (5-85)||(10074063-10074142)
chr6 (7-87)||(14748412-14748491)
chr6 (5-87)||(2377759-2377840)
chr6 (9-87)||(2378131-2378208)
chr6 (9-87)||(29518508-29518585)
chr6 (9-87)||(29518925-29519002)
chr6 (9-87)||(32741184-32741261)
chr6 (5-87)||(2579564-2579645)
chr6 (8-86)||(9062424-9062501)
chr6 (5-87)||(32460652-32460733)
chr6 (5-87)||(35210209-35210290)
chr6 (14-87)||(2579953-2580025)
chr6 (14-87)||(26544054-26544126)
chr6 (8-87)||(10073691-10073767)
chr6 (5-87)||(10911570-10911652)
chr6 (5-87)||(3058231-3058312)
chr6 (5-87)||(3415463-3415544)
chr6 (5-87)||(6999868-6999949)
chr6 (5-87)||(16107683-16107764)
chr6 (5-87)||(16108068-16108149)
chr6 (22-87)||(593798-593862)
chr6 (23-87)||(1950275-1950338)
chr6 (15-87)||(5832108-5832179)
chr6 (8-87)||(17135144-17135222)
chr6 (5-87)||(2578515-2578595)
chr6 (5-87)||(3409665-3409746)
chr6 (5-87)||(16454580-16454661)
chr6 (9-86)||(1127366-1127442)
chr6 (5-86)||(16454913-16454993)
chr6 (5-87)||(1846753-1846834)
chr6 (9-87)||(2578911-2578987)
chr6 (5-86)||(2843560-2843641)
chr6 (5-87)||(6071137-6071218)
[»] chr8 (44 HSPs)
chr8 (14-87)||(9608750-9608822)
chr8 (6-87)||(41972163-41972243)
chr8 (5-85)||(34835216-34835295)
chr8 (8-87)||(25561891-25561969)
chr8 (5-87)||(3669692-3669773)
chr8 (5-87)||(9309360-9309441)
chr8 (14-87)||(40518587-40518659)
chr8 (5-87)||(147456-147537)
chr8 (5-87)||(1013943-1014024)
chr8 (5-87)||(3038362-3038443)
chr8 (5-87)||(45121982-45122063)
chr8 (9-87)||(45122133-45122210)
chr8 (14-87)||(3670065-3670137)
chr8 (4-85)||(9482675-9482755)
chr8 (23-87)||(43398161-43398224)
chr8 (5-80)||(5420663-5420737)
chr8 (5-84)||(33113439-33113517)
chr8 (14-85)||(41416252-41416322)
chr8 (21-87)||(18372787-18372852)
chr8 (5-87)||(34834881-34834962)
chr8 (6-87)||(4154739-4154819)
chr8 (6-87)||(18373004-18373084)
chr8 (5-85)||(34835481-34835561)
chr8 (5-85)||(34835747-34835827)
chr8 (5-85)||(70346-70425)
chr8 (8-87)||(6876937-6877016)
chr8 (7-87)||(40579580-40579659)
chr8 (21-84)||(1514003-1514065)
chr8 (8-67)||(45122649-45122707)
chr8 (21-87)||(18372344-18372409)
chr8 (5-87)||(30359276-30359357)
chr8 (14-87)||(8918845-8918917)
chr8 (25-82)||(25561736-25561792)
chr8 (12-87)||(1014324-1014398)
chr8 (8-67)||(9483262-9483320)
chr8 (7-82)||(18372068-18372142)
chr8 (5-87)||(9620748-9620829)
chr8 (5-86)||(4154353-4154432)
chr8 (46-87)||(6731909-6731950)
chr8 (6-87)||(18372676-18372755)
chr8 (14-87)||(18380098-18380170)
chr8 (22-87)||(30359614-30359678)
chr8 (5-87)||(30441086-30441171)
chr8 (46-87)||(45123011-45123052)
[»] chr3 (45 HSPs)
chr3 (7-87)||(15772859-15772938)
chr3 (5-87)||(21832415-21832496)
chr3 (8-87)||(12114637-12114715)
chr3 (5-87)||(22304574-22304655)
chr3 (5-87)||(32462972-32463054)
chr3 (5-87)||(35946527-35946608)
chr3 (5-87)||(43346863-43346944)
chr3 (8-87)||(1634389-1634468)
chr3 (7-86)||(33803326-33803404)
chr3 (5-87)||(37990711-37990792)
chr3 (5-87)||(37991049-37991130)
chr3 (14-87)||(49336768-49336840)
chr3 (7-87)||(25739499-25739578)
chr3 (8-87)||(29644656-29644734)
chr3 (8-87)||(29644977-29645055)
chr3 (16-87)||(33175747-33175817)
chr3 (5-83)||(39935027-39935104)
chr3 (5-87)||(45901718-45901800)
chr3 (5-87)||(52634681-52634761)
chr3 (22-87)||(50612541-50612605)
chr3 (22-87)||(54017905-54017969)
chr3 (8-84)||(7767389-7767464)
chr3 (15-87)||(9240154-9240225)
chr3 (5-73)||(41359837-41359904)
chr3 (15-87)||(42342470-42342541)
chr3 (14-82)||(42584903-42584970)
chr3 (7-87)||(51886566-51886645)
chr3 (23-87)||(53118064-53118127)
chr3 (8-87)||(39389075-39389153)
chr3 (5-87)||(4823660-4823741)
chr3 (5-87)||(15773197-15773278)
chr3 (21-87)||(31190022-31190087)
chr3 (14-87)||(8327909-8327981)
chr3 (22-87)||(25755399-25755463)
chr3 (14-87)||(54018279-54018351)
chr3 (23-87)||(37726509-37726572)
chr3 (7-87)||(39336303-39336382)
chr3 (14-85)||(3135154-3135224)
chr3 (53-87)||(12747871-12747905)
chr3 (5-79)||(32589716-32589789)
chr3 (25-87)||(36986040-36986101)
chr3 (25-87)||(37011479-37011540)
chr3 (46-87)||(22304251-22304292)
chr3 (26-87)||(32462651-32462712)
chr3 (14-87)||(39914257-39914329)
[»] scaffold0078 (2 HSPs)
scaffold0078 (5-87)||(5362-5443)
scaffold0078 (5-87)||(4987-5068)
[»] chr7 (39 HSPs)
chr7 (5-87)||(7517585-7517666)
chr7 (5-87)||(16569201-16569282)
chr7 (5-87)||(16596380-16596461)
chr7 (5-87)||(37533082-37533163)
chr7 (14-87)||(8128522-8128594)
chr7 (5-87)||(1085688-1085769)
chr7 (5-87)||(22566734-22566815)
chr7 (5-87)||(28301615-28301696)
chr7 (5-87)||(30244275-30244356)
chr7 (5-87)||(30245082-30245163)
chr7 (13-87)||(45434641-45434714)
chr7 (5-87)||(7554030-7554111)
chr7 (5-87)||(20599319-20599400)
chr7 (5-87)||(22567111-22567191)
chr7 (5-86)||(23449-23529)
chr7 (5-85)||(11845198-11845277)
chr7 (5-84)||(24177443-24177521)
chr7 (8-87)||(41910669-41910747)
chr7 (9-87)||(118377-118454)
chr7 (5-87)||(6054565-6054646)
chr7 (5-87)||(29157570-29157651)
chr7 (5-87)||(36939805-36939886)
chr7 (24-87)||(30245499-30245561)
chr7 (24-87)||(30255344-30255406)
chr7 (8-87)||(43241500-43241578)
chr7 (21-87)||(30244706-30244771)
chr7 (8-86)||(34218109-34218186)
chr7 (14-87)||(40094855-40094927)
chr7 (14-87)||(40230372-40230444)
chr7 (14-87)||(47129100-47129172)
chr7 (5-77)||(1085320-1085391)
chr7 (23-87)||(36109007-36109070)
chr7 (8-87)||(14681515-14681593)
chr7 (5-84)||(19122740-19122817)
chr7 (14-80)||(36534865-36534930)
chr7 (5-87)||(37533436-37533517)
chr7 (25-87)||(45433246-45433307)
chr7 (5-46)||(30253537-30253578)
chr7 (46-87)||(36622965-36623006)
[»] chr5 (39 HSPs)
chr5 (5-87)||(26074617-26074698)
chr5 (9-87)||(36492293-36492370)
chr5 (5-87)||(299494-299575)
chr5 (5-87)||(6224201-6224282)
chr5 (5-87)||(18603192-18603273)
chr5 (5-87)||(40296387-40296468)
chr5 (14-87)||(1028598-1028670)
chr5 (5-86)||(9498726-9498806)
chr5 (5-86)||(41170640-41170720)
chr5 (14-87)||(41632787-41632859)
chr5 (5-87)||(26075234-26075315)
chr5 (5-87)||(32487399-32487479)
chr5 (5-87)||(36568639-36568720)
chr5 (14-87)||(13415841-13415913)
chr5 (14-87)||(26074323-26074395)
chr5 (5-85)||(11417049-11417128)
chr5 (5-79)||(3295087-3295160)
chr5 (5-87)||(6500456-6500536)
chr5 (5-87)||(6500828-6500908)
chr5 (5-87)||(26074218-26074299)
chr5 (5-87)||(27502108-27502189)
chr5 (14-87)||(25327940-25328012)
chr5 (5-82)||(34753097-34753173)
chr5 (15-87)||(15370104-15370175)
chr5 (5-80)||(33747783-33747857)
chr5 (5-79)||(3295416-3295489)
chr5 (5-87)||(26590982-26591063)
chr5 (5-87)||(31509628-31509709)
chr5 (25-87)||(35150012-35150073)
chr5 (29-87)||(38427553-38427610)
chr5 (5-87)||(42508617-42508698)
chr5 (14-87)||(26074863-26074935)
chr5 (5-87)||(24489278-24489357)
chr5 (25-87)||(300964-301025)
chr5 (5-87)||(624201-624282)
chr5 (5-87)||(2411012-2411093)
chr5 (9-87)||(29549331-29549408)
chr5 (46-87)||(12662764-12662805)
chr5 (22-87)||(42405685-42405749)
[»] scaffold0734 (2 HSPs)
scaffold0734 (5-87)||(5782-5863)
scaffold0734 (14-87)||(5401-5473)
[»] scaffold0702 (2 HSPs)
scaffold0702 (5-87)||(586-667)
scaffold0702 (20-87)||(229-295)
[»] scaffold0391 (2 HSPs)
scaffold0391 (5-87)||(1178-1259)
scaffold0391 (46-87)||(3097-3138)
[»] scaffold0171 (1 HSPs)
scaffold0171 (5-87)||(17528-17609)
[»] scaffold0504 (1 HSPs)
scaffold0504 (14-87)||(10192-10264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (53-87)||(39843-39877)


Alignment Details
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 253 - 702
Target Start/End: Complemental strand, 44685285 - 44684832
Alignment:
Q  253 taattaactgcaaaattacaagtatataataattaatggaaaacctaggagaaagcaccatgacaatggctttcaattctgattcagagttgtttccgat 352  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44685285 taattaactacaaaattacaagtatataataatta-tggaaaacctaggagaaagcaccatggcaatggctttcaattctgattcagagttgtttccgat 44685187  T
Q  353 ggttaatgttaacaatgccaagctgtcaatagaagaagagagacgtgaaaatgttgatgaagagaatagacgtaaggagcttgctatcaacgagtgcatg 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  44685186 ggttaatgttaacaatgccaagctgtcaatagaagaagagagacgtgaaaatgttgatgaagagaatagacgtaaggaccttcctatcaacgagtgcatg 44685087  T
Q  453 ggcgaaaaagatgccaatttggatgcaataattgctcgctatgcggagactataaacaagtacaacttacgtaacttaggtagggttttggtgcttcatt 552  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685086 ggcgaaaaagatgccaatttggatgcaataattgctcgctatgcggagactataaacaagtacaacttacgtaacttaggtagggttttggtgcttcatt 44684987  T
Q  553 tttctatctttagttattaagttatctaaac-----nnnnnnnnnntcattttcttcttcattaaatttttcattctattcactagatccgtatggtata 647  Q
    ||||||| |||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44684986 tttctatatttagttattaagttatctaaacaaaaaaaaaaaaaaatcattttcttcttcattaaatttttcattctattcactagatccgtatggtata 44684887  T
Q  648 ttgttttccttggatgtttaaattctttgatacctatctaaaacaattcacctac 702  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44684886 ttgttttccttggatgtttaaattctttgatacctatctaaaacaattcacctac 44684832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 44685543 - 44685327
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacg-----------cgtgt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||| |    
T  44685543 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacacgt-t 44685445  T
Q  94 tgtgtgtgataggaaaataccacgtatgtacaccaaaatgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaac 193  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685444 tgtgtgtgataggaaaatactacgtatgtacaccaaaatgaattgtggacatcattgattcaagtatagaagaatacacccaatccacaaaatatttaac 44685345  T
Q  194 taactcaccttcttttgc 211  Q
    ||||||||||||||||||    
T  44685344 taactcaccttcttttgc 44685327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 456 - 565
Target Start/End: Complemental strand, 44662669 - 44662558
Alignment:
Q  456 gaaaaagatgccaatttggatgcaataattgctcgctatgcggagactataaacaagtacaacttacgtaacttaggtagggttttggtgcttc--attt 553  Q
    |||| ||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | ||||||||||||||| ||||||||||||  ||||    
T  44662669 gaaacagatgccaatttggatgcaataattgctcactatgctcagactataaccaagtacaacatgcgtaacttaggtaggcttttggtgcttcatattt 44662570  T
Q  554 ttctatctttag 565  Q
    ||||||||||||    
T  44662569 ttctatctttag 44662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 22077574 - 22077648
Alignment:
Q  12 gagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  22077574 gagtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataactcacac 22077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 44290897 - 44290978
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  44290897 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 44290978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 66553 - 66625
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  66553 gtttatggatcctcttacttataaggtgttcaa-cctttacttttctatccgatatggaacatataactcacac 66625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 41157075 - 41156996
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||| |||||||||||||| ||||||    
T  41157075 gcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgttatgggacatataattcacac 41156996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 24600389 - 24600467
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||  || |||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24600389 caatgagtttatgagttctcttacttataatatgttcaa-cctttacttttctatccgatatgggacatataactcacac 24600467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 66168 - 66230
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 76  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  66168 gtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacat 66230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 5320037 - 5320118
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||| |||||||| ||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||||||    
T  5320037 aggctatgagtttatgggtcctctcacttataaggtgttcaa-cttttacttttctatccgatgtggaacatataactcacac 5320118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 17294663 - 17294582
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  17294663 aggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 17294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 26661594 - 26661675
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||| ||||||||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  26661594 aggcaatgagtttatgggtcctctcacttataaggtgttc-aacctttactcttttacccgatgtgggacatataactcacac 26661675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 41142458 - 41142377
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41142458 aggcaatgggtttatgggtccttttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 41142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 44290530 - 44290611
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  44290530 aggcaatgggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcacac 44290611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 3537228 - 3537300
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3537300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 22077183 - 22077243
Alignment:
Q  6 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 67  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22077183 ggcaatgagtttatgggtcctcttacttataaggtattc-aacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 24132057 - 24132137
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||||||||| | ||| |||| ||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  24132057 aggcaatgagtttatggatccccttatttataaggtgttcaa-cctttacttttctatccgatgagggacatataactcaca 24132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 32594791 - 32594869
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| | |||||||||||||||||    
T  32594791 caatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtaggacatataactcacac 32594869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3550806 - 3550725
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  3550806 aggcaatgggtttatgagtcctcttacttataaggtgttcaa-cctttactattttatctgatgtgggacatataactcacac 3550725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 41157461 - 41157380
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| |||||||||||||||||||    
T  41157461 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgggacatataactcacac 41157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 41184497 - 41184578
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| || ||||||||||||||||    
T  41184497 aggcaatgggtttatgggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgagacatataactcacac 41184578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 21378122 - 21378194
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||||||| ||||    
T  21378122 gtttatgggtcctcttacttataagatattcaa-cctttactgttctatccgatctgggacatataactgacac 21378194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 50052104 - 50052176
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  50052104 gtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcacac 50052176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 3537674 - 3537753
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacg 88  Q
    ||||| |||||| |||||||||||| ||||||| ||||| |||||||| || |||||||| |||||||||||||| |||||    
T  3537674 caatgggtttataggtcctcttactcataaggtgttcaa-cctttactattttatccgatgtgggacatataactaacacg 3537753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 5575180 - 5575110
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||  |||||||||||| |||||    
T  5575180 tttataggtcctcttacttataaggtgttcaa-cctttactcttctatccgacgtgggacatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 22077899 - 22077981
Alignment:
Q  4 taggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||| |||||||||||||||||| | ||| |||||||| ||||||||||||| |   |||||||||||||||    
T  22077899 taggctatgagtttatgggtcctcttacttataagatgttc-aacctttatttttctatccgatttaaaacatataactcacac 22077981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 39066275 - 39066353
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||| |||| ||||| ||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||||    
T  39066275 caatgattttatgggtcatcttagttataaggtgttcaa-cctttacttttctatccgatgtggaatatataactcacac 39066353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 45084457 - 45084387
Alignment:
Q  16 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggagatataactcacac 45084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 22793360 - 22793283
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| | |||||| |||||||| |||||||| ||| ||||||||||| |||| |||||||||||||||||||    
T  22793360 aatgggtttatggatcctctcacttataaagttttcaa-cctctacttttctatacgatgtgggacatataactcacac 22793283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 29798285 - 29798204
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||||| || | |||||||||||||||||    
T  29798285 aggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatccaatgtaggacatataactcacac 29798204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 34365011 - 34364930
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| |||||||||||||||||||| ||| |||||||| | || |||||||| || ||||||||||||||||    
T  34365011 aggctatgggtttatgggtcctcttacttataaggtgttc-aacctttattattttatccgatgtgtgacatataactcacac 34364930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 40082492 - 40082412
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||| ||||| | |||||||||||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  40082492 aggcaatgaatttat-gatcctcttacttataaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 40082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 3875403 - 3875479
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||||| ||||||  ||||||||||||||||||| | ||| ||||||||||| |||||||| || |||||||||||    
T  3875403 aggcaatgggtttatgagtcctcttacttataaggtgtacaa-cctttacttttttatccgatgtgtgacatataact 3875479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 34364575 - 34364512
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  34364575 tcctcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 34364512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 37556183 - 37556116
Alignment:
Q  20 tggtcctcttacttataaggttttcaaacctttact-tttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| | ||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  37556183 tggtcctcttacttataagatgttcaa-cctttactatttttatccgatgtgggacatataactcacac 37556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 4956275 - 4956218
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccg 65  Q
    ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  4956275 gcaatgagtttatggatcctcttacttataagatgttc-aacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 26661970 - 26662051
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| |||| ||| ||||||||||| ||||| |||||||| || |||| ||||||||| |||||||||||||    
T  26661970 aggcaatcggtttatgggtcttctcacttataaggtgttcaa-cctttactcttttatctgatatgggatatataactcacac 26662051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 30630710 - 30630791
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| ||| ||||||||||||| || | |||||||||| |||| |||||||| || ||||||||| ||||||    
T  30630710 aggcaatgtgtttatgggttctcttacttataaagtgt-caaacctttaattttttatccgatgtgagacatataaatcacac 30630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 31767249 - 31767314
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||| |||||    
T  31767249 ggtcctcttacttataaggtgttc-aacctttactgttttatccgatgtggaacatataacccacac 31767314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 48588560 - 48588641
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||| ||||  |||| ||||||||||||||| ||| |||||||||| || |||||||| | ||||||| |||||||||    
T  48588560 aggcaatgaatttacgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtcggacatagaactcacac 48588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 34649499 - 34649443
Alignment:
Q  30 acttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  34649499 acttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 34649443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 37850681 - 37850753
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||| |||||||||||||||| ||||| ||| |||| || ||| |||| |||||||||||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaa-cctctactgttttatgcgatgtgggacatataactcacac 37850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 1188662 - 1188741
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||  ||| ||| ||||||||  | ||||| |||  ||||||||||||||||||| |||||||||||||||    
T  1188662 gcaatgagtttatgagtcttctcacttataaaatattcaa-cctccacttttctatccgatatggaacatataactcacac 1188741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 9955978 - 9955912
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttct-atccgatatgggacatataactcacac 87  Q
    ||||||||||||||||| || ||||| ||||||||||| | ||| ||| |||||||||||||||||||    
T  9955978 ggtcctcttacttataatgtgttcaa-cctttactttttttatctgatgtgggacatataactcacac 9955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 11977346 - 11977285
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||| ||||| | |||||| || || ||||| |||||||||||||||||||    
T  11977346 ctcttacttataaggtgttcaa-catttactgttttacccgatgtgggacatataactcacac 11977285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 37555800 - 37555735
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||| || ||||| |||| ||| || |||||||| |||||| ||||||||||||    
T  37555800 ggtcctcttacttataatgtattcaa-ccttcactattttatccgatgtgggacttataactcacac 37555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 41759569 - 41759488
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| | || ||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  41759569 aggcaatggatttatggatcatcttacttataaggtgttcaa-cttttactattttatccgatgtgtgacatataactcacac 41759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 5528830 - 5528902
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||||||||  ||||||||| ||||||| | ||||| |||||||| || |||||||| || |||||||||||    
T  5528830 aatgagtttatgagtcctcttatttataagatgttcaa-cctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 14318943 - 14318875
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    ||||| |||| ||||||||||||||| ||| |||||||||| || |||||||  ||| ||||||||||||    
T  14318943 tttatgggtcttcttacttataaggtgttc-aacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 38804436 - 38804508
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| | ||||||||||||||| || ||||| |||||||| || ||| |||| |||||| ||||||||||||    
T  38804436 gtttatggatcctcttacttataatgtgttcaa-cctttactcttttattcgatgtgggacgtataactcacac 38804508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 9e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 462 - 570
Target Start/End: Original strand, 29339642 - 29339750
Alignment:
Q  462 gatgccaatttggatgcaataattgctcgctatgcggagactataaacaagtacaacttacgtaacttaggtagggttttggtgcttcatttttctatct 561  Q
    ||||||||||| |||||| ||||| ||| ||||| |||||||||||||||||||||||| || ||||||||| || ||||| ||||| ||||||||||||    
T  29339642 gatgccaatttagatgcagtaattactcactatgtggagactataaacaagtacaacttgcgcaacttaggtgggtttttgatgcttgatttttctatct 29339741  T
Q  562 ttagttatt 570  Q
    |||| ||||    
T  29339742 ttagatatt 29339750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 16888889 - 16888967
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  16888889 caatgagtttataggttctcttacttataaggtattcaa-cctttacttttctatccgatgtgggacatataactcacac 16888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 462 - 557
Target Start/End: Original strand, 29352804 - 29352899
Alignment:
Q  462 gatgccaatttggatgcaataattgctcgctatgcggagactataaacaagtacaacttacgtaacttaggtagggttttggtgcttcatttttct 557  Q
    ||||||||||| |||||| ||||||||| ||||| ||||||||||||||| ||||||||  |||||||||||||| ||||| ||||| ||||||||    
T  29352804 gatgccaatttagatgcagtaattgctcactatgtggagactataaacaaatacaacttgtgtaacttaggtaggtttttgatgcttgatttttct 29352899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 36629323 - 36629242
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||||||||||    
T  36629323 aggcaatgagtttatgggtcctcttacttataaggtgtttaa-cttttacttttctatccgatgtgggacatataactcacac 36629242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 3244524 - 3244602
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| || ||||||||||||||||    
T  3244524 caatgagtttatgggtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgagacatataactcacac 3244602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 41370443 - 41370362
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||||||| ||| |||||| || |||||||| |||||||||||||||||||    
T  41370443 aggcaatgggtttatgggtcctcttacttataaggttttc-aacatttactattttatccgatttgggacatataactcacac 41370362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 2740777 - 2740705
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  2740777 gtttataggtcctcttacttataaggtgttcaa-cctttactgttctatccgatgtgggacatataactcacac 2740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 49076521 - 49076599
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  49076521 caatgggtttataggtcctcttacttataaggtgttcaa-cctttactgttttatccgatatggtacatataactcacac 49076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 52884973 - 52884892
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884973 aggcaatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 16889624 - 16889687
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  16889624 tcctcttacttataaggtattcaa-cctttacttttctatccgatttgagacatataactcacac 16889687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 2741146 - 2741076
Alignment:
Q  16 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  2741146 ttatgggtcctcttacttataaggtattcaa-cctttactattctatctgatgtgggacatataactcacac 2741076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 760275 - 760194
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||| |||||||| ||| |||| |||| | |||||||| |||| |||||||||||||||||||    
T  760275 aggcaatgagtttatgggtcctctcacttataaagttctcaa-ccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4955387 - 4955468
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| ||| |||||| ||| || ||||||||||| ||||||||||||||||    
T  4955387 aggcaatgggtttatgagtcctcttacttataaggtgttc-aaccttaactattttatccgatatgagacatataactcacac 4955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 34646719 - 34646800
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||| ||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  34646719 aggcaatgagtttatgagtcctcttagttataaggtgttc-aacatttactgttttatccgatgtgggacatataactcacac 34646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 39792930 - 39793011
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||  | ||||||| |||||||||| ||||| | |||||||||||||| ||| |||||||||||||||||||    
T  39792930 aggcaatgagtttacggttcctctttcttataaggtgttcaa-catttacttttctatctgatgtgggacatataactcacac 39793011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 52884781 - 52884700
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| | || ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52884781 aggcaatgggtttatcgatcatcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 52884700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 54741264 - 54741329
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| ||||||    
T  54741264 ggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataattcacac 54741329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 55933194 - 55933275
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||| ||||| || |||||||| | |||||||||||||||||    
T  55933194 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacccttactattttatccgatgtaggacatataactcacac 55933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 50630825 - 50630904
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    |||||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||| | |||||||||||||||    
T  50630825 aggcaatgggtttatgggtcctcttacttataatgtgttc-aacctttactattttatccgatgtaggacatataactcac 50630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 54108999 - 54108928
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 77  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||    
T  54108999 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 10245991 - 10245925
Alignment:
Q  20 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||| ||||||||||||||    
T  10245991 tggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtggggcatataactcacac 10245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 41707537 - 41707615
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| ||| || ||||||||| ||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41707537 caatgagtttatgggttcttttacttatatggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 41707615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 25483422 - 25483341
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| | |||||||||||||||| | ||||| |||||||| || |||||||| || ||||||||||||||||    
T  25483422 aggcaatgggtttatggatcctcttacttataagatgttcaa-cctttactattttatccgatgtgagacatataactcacac 25483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 49880246 - 49880165
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| || |||||| |||||||||||||||||||| ||| |||||||||| || ||| | || |||||||||||||||||||    
T  49880246 aggcagtgggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtgggacatataactcacac 49880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 54017665 - 54017746
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||| | ||| |||||||||| || |||| ||  |||||||||||||||||||    
T  54017665 aggcaatgggtttatgggtcctcttacttataagatgttc-aacctttactattttatctgacgtgggacatataactcacac 54017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 39404475 - 39404403
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| | |||||||| || |||| ||| |||||||||||||||||||    
T  39404475 gtttatgggtcctcttacttataaggtgttcca-cctttactcttttatctgatgtgggacatataactcacac 39404403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 45496888 - 45496820
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 77  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||  || |||||||| |||||||||    
T  45496888 caatgagtttataggtcctcttacttataaggtgttc-aacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 54343087 - 54343147
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  54343087 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 22028031 - 22028112
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| |||||||||||||||||||| ||| |||||||  | || |||||||| |||||||||||| ||||||    
T  22028031 aggcaatatgtttatgggtcctcttacttataaggtgttc-aacctttcgtattttatccgatgtgggacatataagtcacac 22028112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 32941193 - 32941274
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  | ||||||| ||||||||| ||| |||||||||| |||| |||||| |  ||||||||||||||||    
T  32941193 aggcaatgagtttatgagccctcttatttataaggtgttc-aacctttactgttctttccgatgtaagacatataactcacac 32941274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 36572105 - 36572024
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| |||| ||||||||||||||| ||||| | |||||| || ||| |||| |||||||||||||||||||    
T  36572105 aggcaatggatttatgggtcttcttacttataaggtgttcaa-catttactcttttattcgatgtgggacatataactcacac 36572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 51768133 - 51768210
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||||||  ||||||||| ||||||||| ||| ||| |||||| || ||| |||||| ||||||||||||||||    
T  51768133 caatgagtttatgagtcctcttatttataaggtgttc-aacatttactcttatattcgatataggacatataactcaca 51768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 1731717 - 1731797
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||  |||||| |||||||||| ||||||| | ||||| |||||||| || |||| ||| ||||||||||||||||||    
T  1731717 aggcaattggtttatgggtcctcttatttataagatgttcaa-cctttactgttttatctgatgtgggacatataactcaca 1731797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 20826303 - 20826223
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||| ||| |||||| ||| ||||||||||||| || ||||| | |||||| || |||||||| ||||||||||||||||||    
T  20826303 aggctatgggtttatgggttctcttacttataacgtgttcaa-cttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 44620737 - 44620665
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||| || ||||| ||| |||| ||  ||||||| |||||||||||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaa-cctctactatttcatccgatgtgggacatataactcacac 44620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 49302992 - 49302909
Alignment:
Q  5 aggcaatgagtttattggtcctcttactt--ataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||  ||||| | ||||| ||||||||||| |||  ||| |||||||||||||||||||    
T  49302992 aggcaatgggtttatgggtcctcttacttttataagatgttcaa-cctttacttttttatttgatgtgggacatataactcacac 49302909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 20825913 - 20825842
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||| ||| |||||| ||||||||| ||||| |||||||| || |||||||| ||| ||||||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaa-cctttactcttttatccgatgtggaacatataactcaca 20825842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 31691238 - 31691202
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggtt 41  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31691238 aggcaatgagtttatgggtcctcttacttataaggtt 31691202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 50002502 - 50002431
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||||||| || || ||||| |||||||| || |||||||| || ||||||||||||||||    
T  50002502 tttatgggtcctcttacttaaaaagtgttcaa-cctttactcttttatccgatgtgagacatataactcacac 50002431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 3341203 - 3341133
Alignment:
Q  16 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||||||||||||| || || || |||||||| || ||||| || |||||||||||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaa-cctttactcttttatccaatgtgggacatataactcacac 3341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 44620362 - 44620304
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    |||||||||||||||| ||||| |||||||| || ||||| || ||||||||||||||||    
T  44620362 ctcttacttataaggtgttcaa-cctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 44621085 - 44621011
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 83  Q
    ||||||||||||  | ||||||||||||||||| ||| |||||||||| || |||||||| |||| |||| |||||    
T  44621085 caatgagtttatgtgccctcttacttataaggtgttc-aacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3340893 - 3340812
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| || |||||| ||||||||||||||||||||  || |||||||||| ||  ||| |||  ||||||||||||||||||    
T  3340893 aggcagtgggtttatgggtcctcttacttataaggtgctc-aacctttactctttcatctgatgcgggacatataactcacac 3340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 22183334 - 22183415
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||| ||||||||||  | ||||| | |||||| || |||||||| ||||| |||||||||||||    
T  22183334 aggcaatgggtttatgggtccttttacttataaattgttcaa-catttactcttttatccgatgtgggatatataactcacac 22183415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 34004658 - 34004734
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||| |||| ||||  || || ||||||||||||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttc-aacctttagtttt-tatcatatgtgtgacatataactcacac 34004734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 44620439 - 44620362
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 83  Q
    |||||||| |||||| ||  |||||| ||||||||| ||||| |||||||| || |||||||| ||| |||||||||||    
T  44620439 aggcaatgggtttatgggctctcttatttataaggtgttcaa-cctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 50459803 - 50459726
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||  ||||||||||||||||| | ||||| |||||||| || || ||||| ||| |||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaa-cctttactcttttaaccgatgtggaacatataactcacac 50459726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 54017788 - 54017845
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 79  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| |||||    
T  54017788 ggtcctcttacttataaggtgttc-aacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 54108612 - 54108551
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 77  Q
    ||||| |||||| ||||||||||||| ||||| |||||||| || ||||| ||||||||||||    
T  54108612 tttatgggtccttttacttataaggtgttcaa-cctttactattttatcctatatgggacata 54108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 3700434 - 3700370
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| ||||||||||||| ||||| | |||||| || |||||||| | |||||||||||||||||    
T  3700434 gtccttttacttataaggtgttcaa-catttactcttttatccgatgtaggacatataactcacac 3700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 39404099 - 39404023
Alignment:
Q  10 atgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||  |||||||||||||||| || ||| |||||||||| || ||| | || | |||||||||||||||||    
T  39404099 atgagtttatgagtcctcttacttataaagtgttc-aacctttactcttttattcaatgtaggacatataactcacac 39404023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 41283547 - 41283628
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||    
T  41283547 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatatgggacatataactcacac 41283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 28254309 - 28254390
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| ||||||    
T  28254309 aggcaatgagtttatgggtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgggacatataagtcacac 28254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 28531386 - 28531467
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  28531386 aggcaatgagtttatgggacctcttacttataaggtgttcaa-cctttgcttttctatccgatgtgggacatataactcacac 28531467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 962681 - 962603
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  962681 caatgggtttatgggtcctctcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6421471 - 6421390
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  6421471 aggcaatgagtttatgagtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 6421390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36178677 - 36178758
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36178677 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacac 36178758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 40679701 - 40679781
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||| ||| |||||| ||| |||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679701 aggcgatgggtttatgggttctcttacttataaggtgttcaaccctt-acttttctatccgatatgggacatataactcaca 40679781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 5542697 - 5542778
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| |||||||||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||||||||    
T  5542697 aggcaataggtttatgggtcctcttacttataaggtgttcaa-cctttactattttattcgatatgggacatataactcacac 5542778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 14745739 - 14745820
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  14745739 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 14745820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15880349 - 15880268
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  15880349 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 15880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 31899498 - 31899579
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  31899498 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 31899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36005952 - 36006032
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||| ||||| ||||||| |||| |||||||||||||||||||    
T  36005952 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacttttac-tttctattcgatgtgggacatataactcacac 36006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 37106010 - 37105929
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| ||||| |||||||||||||| ||| |||||||||| || ||| |||| |||||||||||||||||||    
T  37106010 aggcaatgagtttatgggtccccttacttataaggtgttc-aacctttactattttattcgatgtgggacatataactcacac 37105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 37106270 - 37106193
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  37106270 aatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 37106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 42514735 - 42514654
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| | |||||||||||||||||    
T  42514735 aggcgatgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatctgatgtaggacatataactcacac 42514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 7598684 - 7598614
Alignment:
Q  16 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaa-cctttacttttttatctgatgtgggacatataactcacac 7598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16542535 - 16542454
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||| ||||||||| ||||| |||||||| || |||||||| |||||| ||||||||||||    
T  16542535 aggcaatgagtttataagtcctcttatttataaggtgttcaa-cctttactattttatccgatgtgggacttataactcacac 16542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 38796299 - 38796371
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgggacatataactcacac 38796371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 40733594 - 40733522
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||||||    
T  40733594 gtttatgggtcctcttacttataaggtgttcaa-catttacttttttatctgatgtgggacatataactcacac 40733522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 40163461 - 40163520
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 81  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||    
T  40163461 ggtcatcttacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 5543070 - 5543151
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| | |||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  5543070 aggcaataggtttatggatcctcttacttataaggtgttcaa-cctttactattttatcggatgtgggacatataactcacac 5543151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 1769973 - 1769897
Alignment:
Q  10 atgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||  ||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttc-aacttttactcttttatccgatgtgtgacatataactcacac 1769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 6713053 - 6712981
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||||||||    
T  6713053 gtttatgggtcctcttacttataaggtgttc-aacatttactgttttatccgatgtgagacatataactcacac 6712981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 38796701 - 38796773
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| |||||||| | || |||| ||| |||||||||||||||||||    
T  38796701 gtttatgggtcctcttacttataaggtgttc-aacctttattgttttatcagatgtgggacatataactcacac 38796773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 37895133 - 37895211
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    |||||||| ||||||  || || |||||| |||||||||||| | |||| ||||||||||||| ||||||||||||||||    
T  37895133 aggcaatgggtttatgtgttcttttacttttaaggttttcaa-cttttatttttctatccgatgtgggacatataactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 7598314 - 7598233
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||| |||||||||| ||||||||| || || ||||||||||||||| |||| | | |||||||| ||||||    
T  7598314 aggctatgagtttatgggtcctcttatttataaggtgttgaa-cctttacttttctattcgatgtagaacatataattcacac 7598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 35580796 - 35580876
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||| ||||||||||| ||||| | |||| | || |||||||| |||||||||||||||||||    
T  35580796 aggcaatgggtttat-ggtcctctcacttataaggtgttcaa-catttattgttttatccgatgtgggacatataactcacac 35580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 15511570 - 15511646
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    ||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | || ||||||||||||||    
T  15511570 caatgggtttatgggtcctcttacttataacgtgttc-aacctttactcttttatccgttgtgtgacatataactcac 15511646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 31468822 - 31468899
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| ||||||||||    |||| | ||||| |||||||| || |||||||| |||||||||||||||||||    
T  31468822 aggcaatgagtttatgggtcctctta----taagatattcaa-cctttactattttatccgatgtgggacatataactcacac 31468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 37632678 - 37632750
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||  | | |||||||||||| || |||||||| | |||||||||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgt-caaacctttactattttatccgatgtaggacatataactcacac 37632750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 37894764 - 37894844
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||  |||||  ||| |||||||||||||||||| |  ||||||||||||||| | || ||||||||||||||||||    
T  37894764 aggcaatggatttatgagtcttcttacttataaggtttttag-cctttacttttctattcaatgtgggacatataactcaca 37894844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 29676971 - 29676908
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| || |||||||| || ||||||||||| || |||||||| |||||||||||||||||||    
T  29676971 tcctctcacctataaggtgtt-aaacctttactcttttatccgatgtgggacatataactcacac 29676908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 28254184 - 28254254
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 76  Q
    |||||| | ||||||  |||||||||||||||| || ||||| |||||||||||||||||||| || |||||    
T  28254184 aggcaaagtgtttatgagtcctcttacttataaagtgttcaa-cctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 33561526 - 33561604
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| |||||||| |||||||| || || || |||  ||||||||||| ||| ||| |||||||||||||||    
T  33561526 caatgagtttatgggtcctctcacttataaagtgtttaa-cctccacttttctatctgatgtggaacatataactcacac 33561604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 36178344 - 36178422
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| ||||||  |||| |||||||||||||| ||| | |||||||| || |||||||  |||||||||||||||||||    
T  36178344 caatgggtttatgagtccccttacttataaggtgttcca-cctttactattttatccgaagtgggacatataactcacac 36178422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 40733950 - 40733888
Alignment:
Q  24 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||| || ||| ||||||| || ||| |||| |||||||||||||||||||    
T  40733950 cctcttacttataaggtgtt-aaatctttactcttttattcgatgtgggacatataactcacac 40733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 9231295 - 9231257
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactca 84  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  9231295 aacctttacttttctatctgatatgagacatataactca 9231257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 12529100 - 12529181
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||||||||| ||| ||| || ||||||| || |||  ||| | |||||||||||||||||    
T  12529100 aggcaatgagtttatgagtcctcttacttatacggtgttc-aatctttactgttttatttgatgtaggacatataactcacac 12529181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30323550 - 30323469
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||| |||| ||| || ||| |||||  | ||||||||| ||| ||||||||||||| |||||    
T  30323550 aggcaatgagtttataggtcctctcacttctaaagtgttc-aacctccaattttctatctgatttgggacatataacacacac 30323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 33731734 - 33731653
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| | ||||||||||||||||||  |||| |||||||| || |||||||| || || |||||||||||||    
T  33731734 aggcaataggtttatggatcctcttacttataaggtgctcaa-cctttactcttttatccgatgtgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 14745366 - 14745446
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||| |||||| ||||||| |||||| ||| | ||||| || ||||| || ||| |||| ||||||||||||||||||    
T  14745366 aggcaatgggtttatgggtcctcatacttacaagatgttcaa-ccattactattttattcgatgtgggacatataactcaca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 36178243 - 36178311
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac 74  Q
    |||||||| |||||| ||| | |||||||||||||| ||| |||||||||| || |||||||| ||||||    
T  36178243 aggcaatgggtttatgggttcccttacttataaggtgttc-aacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 36785675 - 36785716
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  36785675 aacctttactattttatccgatgtgggacatataactcacac 36785716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 10074435 - 10074516
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | ||||||||||    
T  10074435 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggacctctaactcacac 10074516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3409345 - 3409264
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3409345 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3409264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 10074063 - 10074142
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||||||||||| ||||| |||||||||||    
T  10074063 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacgtttacttttctatccgatgtgggatatataactcac 10074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 14748412 - 14748491
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| |||||||||| ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  14748412 gcaatgagtttatgggtcctcttatttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 14748491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 2377840 - 2377759
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  2377840 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 2377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 2378208 - 2378131
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2378208 aatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 2378131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 29518585 - 29518508
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29518585 aatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 29519002 - 29518925
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  29519002 aatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 29518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 32741261 - 32741184
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32741261 aatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 2579564 - 2579645
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| || ||||||||||||||||| | | | ||||||||||| | |||||| |||||||||||||||||||    
T  2579564 aggcaatgagtttatgggccctcttacttataaggtatccga-cctttacttttttgtccgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 9062424 - 9062501
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||||||  ||||||||||||||||| | ||||| |||||||| || |||||||| ||||||||||||||||||    
T  9062424 caatgagtttatgagtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcaca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 32460652 - 32460733
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||| |||| |||||||||||||||||||    
T  32460652 aggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatacgatgtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 35210290 - 35210209
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| |||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  35210290 aggcaatggttttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 35210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 2579953 - 2580025
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  2579953 gtttatgggtcctcttacttataatgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 2580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 26544126 - 26544054
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  26544126 gtttatgggtcctcttacttataacgtgttcaa-cctttactattttatccgatgtgggacatataactcacac 26544054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 10073691 - 10073767
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| | |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||||||| ||||    
T  10073691 caatgagtttatggatcctcttacttataaggtgttc-aacctttacttttc--tccgatgtgggacatataactaacac 10073767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 10911652 - 10911570
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttac-ttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||| |||| ||| | |||||||||||||||||    
T  10911652 aggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactttttttatctgatgtaggacatataactcacac 10911570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3058312 - 3058231
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| | ||||| |||||||||||| ||||| |||||||| || |||||||| |||||||||||||| ||||    
T  3058312 aggcaatgggtttatggatcctcatacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactaacac 3058231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3415544 - 3415463
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||| ||| ||| |||||||||| || |||  ||| |||||||||||||||||||    
T  3415544 aggcaatgggtttatgggtcctcttacttatatggtgttc-aacctttactattttatgtgatgtgggacatataactcacac 3415463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 6999868 - 6999949
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| ||||||||| | ||||||||| |||||||| ||||| | ||||||||| |||||||| | |||||||||||||||||    
T  6999868 aggcagtgagtttatggatcctcttacatataaggtgttcaa-cttttacttttttatccgatgtaggacatataactcacac 6999949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16107764 - 16107683
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| || || ||||||||||| |||||||| ||  |||||||||||||||    
T  16107764 aggcaatgggtttatgagtcctcttacttataaggtgtttaa-cctttacttttttatccgatgtgacacatataactcacac 16107683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16108149 - 16108068
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  16108149 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacatttactcttttatctgatgtggaacatataactcacac 16108068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 593798 - 593862
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||| |||||||||    
T  593798 gtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatacaactcacac 593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 1950275 - 1950338
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||| |||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  1950275 tcctcttacttgtaaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 1950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 5832108 - 5832179
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||| ||||    
T  5832108 tttatgggtcctcttacttataaggtgttc-aacctttactcttttatccaatgtgggacatataacttacac 5832179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 17135144 - 17135222
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||   ||||||| |||||||||| || |||| ||||||| |||||||||| || ||||||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtatt-aaacatttacttctctatccgatgtgagacatataactcacac 17135222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 2578515 - 2578595
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | |||||||||||||||||||    
T  2578515 aggctatgggtttatgggtcctcttacttataaagtgttc-aacctttactcttttatccg-tgtgggacatataactcacac 2578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3409746 - 3409665
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||| | ||| ||| |||||| || |||| ||| ||| |||||||||||||||    
T  3409746 aggcaatgggtttatgggtcctcttacttataagatgttc-aacttttactattttatctgatgtggtacatataactcacac 3409665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16454661 - 16454580
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||| |||| | || |||| ||| ||||||| |||||||||||    
T  16454661 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacttttattcttttatctgatgtgggacacataactcacac 16454580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 1127442 - 1127366
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||| ||||||  ||||||||||||||||||| ||| |||||||||| || || ||||| ||||| ||||||||||||    
T  1127442 aatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttacccgatgtgggatatataactcaca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 16454993 - 16454913
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||  |||||| |||||| ||||||||||||| ||| |||||||||| || |||| ||| ||||||| ||||||||||    
T  16454993 aggcaataggtttatgggtcctattacttataaggtgttc-aacctttactcttttatctgatgtgggacacataactcaca 16454913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 1846834 - 1846753
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| || |||||| || ||||||    
T  1846834 aggcaatggatttatgggtgctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatagaattcacac 1846753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 2578911 - 2578987
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||| | |||||||| ||||||||| ||| ||| ||||||||| ||||||||  ||||||||||| ||||||    
T  2578911 aatgagtttatggatcctcttatttataaggtattc-aacatttactttt-tatccgatgagggacatataaatcacac 2578987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 2843641 - 2843560
Alignment:
Q  5 aggcaatgagtttattgg-tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||||||||| || |||||||||||||||||| ||| ||| |||| | || |||||||| ||  ||||||||||||||    
T  2843641 aggcaatgagtttatggggtcctcttacttataaggtgttc-aacttttattattttatccgatgtgaaacatataactcaca 2843560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6071218 - 6071137
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| | || ||| |||||||| || ||||| |||  |||||||||| | || |||||||||||||||||||    
T  6071218 aggcaatgagtttatggatcatctcacttataaagtgttcaa-cctccacttttctattcaatgtgggacatataactcacac 6071137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 9608822 - 9608750
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  9608822 gtttatgggtcatcttacttataaggtgttcaa-cctttacttttctatccgatatgggacatataactcacac 9608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 41972243 - 41972163
Alignment:
Q  6 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  41972243 ggcaatgggtttatgggtcctatcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacac 41972163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 34835295 - 34835216
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||    
T  34835295 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatcggatgtgggacatataactcac 34835216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 25561891 - 25561969
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25561891 caatgagtttatgggtcctcttacttataaggtgttc-aacgtttactcttttatccgatgtgggacatataactcacac 25561969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 3669773 - 3669692
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  3669773 aggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 3669692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 9309441 - 9309360
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  9309441 aggcaatgagtttaagggtcctcttacttataaggtgttc-aacatttactcttttatccgatgtgggacatataactcacac 9309360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 40518659 - 40518587
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||    
T  40518659 gtttatgggtcctcttatttataaggtgttcaa-cctttacttttctatctgatgtgggacatataactcacac 40518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 147537 - 147456
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| |||||||||| ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  147537 aggcaataggtttatgggtcctcttatttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 147456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 1013943 - 1014024
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||||||||||||||||||| ||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  1013943 aggcaatgggtttattggtcctcttacttatagggtgttc-aacttttactattttatccgatgtggaacatataactcacac 1014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 3038362 - 3038443
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||| |||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  3038362 aggcaatgggtttatgggtccttttacttataaagtgttcaa-cctttactattttatccgatgtgggacatataactcacac 3038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 45121982 - 45122063
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  |||||||||||||||| || ||| |||||||||| || ||| |||| |||||||||||||||||||    
T  45121982 aggcaatgagtttatgagtcctcttacttataaagtgttc-aacctttactattttatgcgatgtgggacatataactcacac 45122063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 45122133 - 45122210
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  45122133 aatgagtttatgggttctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatataactcacac 45122210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 3670137 - 3670065
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||| |||||||||||| || ||||||||||| || |||||||| |||||||||||||||||||    
T  3670137 gtttatgggtcctcatacttataaggtgtt-aaacctttactattttatccgatgtgggacatataactcacac 3670065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 9482675 - 9482755
Alignment:
Q  4 taggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    ||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || ||| |||||||||||||    
T  9482675 taggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 43398161 - 43398224
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||    
T  43398161 tcctcttatttataaggtgttcaa-cctttacttttctatccgatatgagatatataactcacac 43398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 5420737 - 5420663
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 80  Q
    |||||||| ||||||  ||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||||    
T  5420737 aggcaatgggtttatgagtcctcttacttataagatgttcaa-cctttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 33113439 - 33113517
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    ||||||||||||||| ||||||||||||||||||   ||| |||||||||| || |||||||| | ||||||||||||||    
T  33113439 aggcaatgagtttatgggtcctcttacttataagacgttc-aacctttactattttatccgatgtaggacatataactca 33113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 18372787 - 18372852
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372787 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgtgacatataactcacac 18372852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 34834962 - 34834881
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||| ||||||||||||||| || || |||||||| || ||||| || |||||||||||||||||||    
T  34834962 aggcaatgagtttatgagtcatcttacttataaggtgtttaa-cctttactattttatccaatgtgggacatataactcacac 34834881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 4154739 - 4154819
Alignment:
Q  6 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||| |||||| | |||||||| || ||||| |||  ||||||||||| ||| |||||||||||||||||||    
T  4154739 ggcaatgagtttatgggtcctttcacttataaagtgttcaa-cctccacttttctatcagatgtgggacatataactcacac 4154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 18373004 - 18373084
Alignment:
Q  6 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||  |||||||||||| ||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttc-aacctttactattttatccgaagtgggacatataaatcacac 18373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 34835561 - 34835481
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 85  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835561 aggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 34835827 - 34835747
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataactcac 85  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||||||    
T  34835827 aggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataactcac 34835747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 70346 - 70425
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    ||||| || |||||| |||||||||||||||||| | ||||| | |||||| || |||||||| |||||||||||||||||    
T  70346 aggcagtgggtttatgggtcctcttacttataagatgttcaa-catttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 6876937 - 6877016
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac-atataactcacac 87  Q
    |||||||| ||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  6876937 caatgagtgtatgggtcatcttatttataaggtgttcaa-cctttacttttttatccgatgtgggactatataactcacac 6877016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 40579580 - 40579659
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| ||||||| |||||||||||||||||||| ||| |||||||||| || ||||| |||||  |||||||| ||||||    
T  40579580 gcaataagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatatgaaacatataattcacac 40579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 1514003 - 1514065
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| ||||| ||||||||||    
T  1514003 ggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggatatataactca 1514065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 45122707 - 45122649
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 67  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  45122707 caatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgat 45122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 18372344 - 18372409
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||    
T  18372344 ggtcttcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacac 18372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30359357 - 30359276
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| ||||||||| |||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  30359357 aggctatgggtttatgggtcctcttgcttataaggtgttcaa-catttactcttttatccgatgtgagacatataactcacac 30359276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 8918845 - 8918917
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||| || ||| |||||||||| | ||||| ||| |||||||| ||||||||||    
T  8918845 gtttatgggtcctcttacttataaagtgttc-aacctttactctgctatctgatgtgggacatgtaactcacac 8918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  25561736 ctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 1014324 - 1014398
Alignment:
Q  12 gagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| || |||| ||| |  ||||||||||||||||    
T  1014324 gagtttacgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtatgacatataactcacac 1014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 9483262 - 9483320
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 67  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  9483262 caatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 18372068 - 18372142
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    ||||||||||||| | |||||||||||||||||| ||| |||||||||| || |||  ||| ||| ||||||||||    
T  18372068 gcaatgagtttatggatcctcttacttataaggtgttc-aacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 9620748 - 9620829
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||| |||||||| ||  || ||| | |||||||||||| | | || ||||||||||||||||    
T  9620748 aggcaatgagtttatgggtcctctcacttataaagtgatc-aacttctacttttctatctgttgtgagacatataactcacac 9620829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 4154353 - 4154432
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||||||||||||| |||| ||| |||||||| || ||||| |||  ||||||||||| ||| | ||||||||||||||||    
T  4154353 aggcaatgagtttatgggtc-tctcacttataaagtgttcaa-cctccacttttctatctgatgtaggacatataactcaca 4154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 6731950 - 6731909
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  6731950 aacctttactattttatccgatgtgggacatataactcacac 6731909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 18372676 - 18372755
Alignment:
Q  6 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||| ||||||  |||||||||||||||| || ||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataa-gtgttc-aacctttactattttatccgaaatggaacatataaatcacac 18372755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 18380098 - 18380170
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| || || |||||||||||||| ||||| |||||||| || ||| |||| ||||| |||||||||||||    
T  18380098 gtttataggcccccttacttataaggtgttcaa-cctttactattttattcgatgtgggatatataactcacac 18380170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 30359678 - 30359614
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| ||| ||| |||||| || |||| ||| || ||||||||||||||||    
T  30359678 gtcctcttacttataaggtgttc-aacttttactcttttatctgatgtgagacatataactcacac 30359614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30441171 - 30441086
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataa----ggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| || ||||||||||||||    ||| ||||| |||||||| || || ||||| |||||||||||||||||||    
T  30441171 aggcaatgggtttatgggccctcttacttataattaaggtgttcaa-cctttactattttagccgatgtgggacatataactcacac 30441086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 45123052 - 45123011
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  45123052 aacctttactattttatccgatgtgggacatataactcacac 45123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 5e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 15772938 - 15772859
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| |||||| || ||||||||||||||||||||||||||||    
T  15772938 gcaatgagtttatgggtcctcttacttataaggtgttc-aacatttactcttttatccgatatgggacatataactcacac 15772859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 21832415 - 21832496
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||    
T  21832415 aggctatgagtttatgagtcctcttacttataaggtgttcaa-cctttacttttctatccaatgtgggacatataactcacac 21832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 12114637 - 12114715
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||    
T  12114637 caatgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgggatatataacttacac 12114715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 22304655 - 22304574
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||| |||||||    
T  22304655 aggcaatgtgtttatgggtcctcttacttataaggtattc-aacctttactattttatccgatgtgggacatatagctcacac 22304574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 32462972 - 32463054
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||| ||||||||||||||| ||||| | |||||| ||||||||||| |||||||||||||||||||    
T  32462972 aggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacac 32463054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 35946608 - 35946527
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| | |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  35946608 aggcaacgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 35946527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 43346863 - 43346944
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| ||| |||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  43346863 aggcaatgagtttatgggttctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 43346944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 1634389 - 1634468
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| ||||||||||||||||| || || || | |||| ||||||||||||| |||||||||||||||||||    
T  1634389 caatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacac 1634468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 33803326 - 33803404
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||| |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||| ||||||||||||||||||    
T  33803326 gcaatgggtttatgggtcctcttacttatatggtgttcaa-cctttactattttatccgatgtgggacatataactcaca 33803404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37990711 - 37990792
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||||||||||||| ||| ||| |||||| || |||||||| ||| |||||||||||||||    
T  37990711 aggcaatgagtttatgagtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataactcacac 37990792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37991049 - 37991130
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||| || ||||| || || ||||||||||||||||    
T  37991049 aggcgatgagtttataggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgagacatataactcacac 37991130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 49336768 - 49336840
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||||||  |||| |||||||||||||||||||| || ||||| ||||||||||    
T  49336768 gtttatgggtcctcttacttataaggtggtcaa-cctttacttttctatccgatgtgagacatgtaactcacac 49336840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 25739499 - 25739578
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| |||||||||||||||| | | ||| ||| |||||| || |||||||| |||||||||||||||||||    
T  25739499 gcaatgagtttatgggtcctcttacttatatgatgttc-aacttttactattttatccgatgtgggacatataactcacac 25739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 29644656 - 29644734
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| ||| |||||||||||||||| ||||| |||||||| ||  ||||||| |||||||||||||||||||    
T  29644656 caatgggtttatgggttctcttacttataaggtgttcaa-cctttactctttaatccgatgtgggacatataactcacac 29644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 29644977 - 29645055
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||||||||||||||| || || |||||||| || |||||||| |||||||||||||| ||||    
T  29644977 caatgggtttatgggtcctcttacttataaggtgtttaa-cctttactcttttatccgatgtgggacatataacttacac 29645055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 33175747 - 33175817
Alignment:
Q  16 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||||||||||||| ||||| |||||||||||||||| ||| || ||||||||||||||||    
T  33175747 ttatgggttctcttacttataaggtgttcaa-cctttacttttctatctgatgtgagacatataactcacac 33175817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 39935027 - 39935104
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 83  Q
    |||||||| |||||| | |||||||||||||||||| ||| |||||||||| || |||||||| | |||||||||||||    
T  39935027 aggcaatgggtttatggatcctcttacttataaggtgttc-aacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 45901800 - 45901718
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||||||  ||||||||||||||||||| ||||| | |||  | || |||||||| |||||||||||||||||||    
T  45901800 aggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacac 45901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 52634761 - 52634681
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||| ||||||||||||||  ||||| |||||||| || |||||||| |||||||||||||||||||    
T  52634761 aggcaatgggtttatgggtc-tcttacttataaggcgttcaa-cctttactgttttatccgatgtgggacatataactcacac 52634681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 50612541 - 50612605
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||    
T  50612541 gtcctcttacttataaggtgttcaatc-tttactattttatccgatgtgggacatataactcacac 50612605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 54017905 - 54017969
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  54017905 gtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtaggacatataactcacac 54017969  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 7767389 - 7767464
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    ||||| ||||||  ||||||||| |||||| || | ||| |||||||||||||||||||| ||||||||||||||||    
T  7767389 caatgggtttatgagtcctcttagttataaagtgtccaa-cctttacttttctatccgatgtgggacatataactca 7767464  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 9240225 - 9240154
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||||||||||||| ||||  | ||||||| |||||||||| ||| |||||||||||||||    
T  9240225 tttatgggtcctcttacttataaggtgttcag-cttttacttctctatccgatgtggaacatataactcacac 9240154  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41359837 - 41359904
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga 73  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||    
T  41359837 aggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactattgtatccgatgtggga 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 42342470 - 42342541
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  42342470 tttatgggtcctcttacttataaggtgttgaa-cctttactcttttatcggatgtgggacatataactcacac 42342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 42584903 - 42584970
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||| | |||||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatc-tttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 51886645 - 51886566
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| |||||||||||||||| | | ||| |||||||||| || ||| |||| || ||||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttc-aacctttactattttattcgatgtgagacatataactcacac 51886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 53118064 - 53118127
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  53118064 tcctctcacttataaggtgttcaa-cctttactcttttatccgatatggaacatataactcacac 53118127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 39389153 - 39389075
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||||| || |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  39389153 caatgggtttatgggtcctcttagttttaaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 39389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 4823741 - 4823660
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| ||||||| |||||||||||| ||  ||| |||||| || |||||||| || ||| ||||||||||||    
T  4823741 aggcaatgagtttatgggtcctcctacttataaggtgtt-taacttttactattttatccgatgtgagacttataactcacac 4823660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15773278 - 15773197
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| ||||  ||||||||||||||||| | ||||| | |||||| || ||| |||| |||||||||||||||||||    
T  15773278 aggcaatgagcttatgagtcctcttacttataagatgttcaa-cttttactcttttattcgatgtgggacatataactcacac 15773197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 31190087 - 31190022
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  31190087 ggtcctctaacttataaggtgttc-aacctttactcttttatccgatgtgggacatatcactcacac 31190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 8327981 - 8327909
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||| |||||||||||||| | ||||  |||||||| || |||||||| |||||||||||||||||||    
T  8327981 gtttatgggttctcttacttataagatattcat-cctttactcttttatccgatgtgggacatataactcacac 8327909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 25755463 - 25755399
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||| ||||| |||||||| || |||| ||| || ||||||||||||||||    
T  25755463 gtcctcttacttataaggtattcaa-cctttactcttttatctgatgtgagacatataactcacac 25755399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 54018279 - 54018351
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| || ||||||| || ||||||||   |||||||||||||||||    
T  54018279 gtttatgggtcctcttacttataaggtgttc-aatctttactcttttatccgatgcaggacatataactcacac 54018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 37726572 - 37726509
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||    
T  37726572 tcctcttacttataaggtattcaa-catttactattttatccgatgtgagacatataactcacac 37726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 39336303 - 39336382
Alignment:
Q  7 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||| | |||||| |||||||| || ||||| |||  |  |||||||||||| |||||||||||||||||||    
T  39336303 gcaatgagtttatggatcctctcacttataaagtgttcaa-cctccaactttctatccgatgtgggacatataactcacac 39336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3135154 - 3135224
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    |||||| ||| || ||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||    
T  3135154 gtttatgggttcttttacttataaggtgttcaa-catttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 12747871 - 12747905
Alignment:
Q  53 acttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacac 12747905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 32589789 - 32589716
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 79  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||| | || ||||  || |||||||||||    
T  32589789 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttattattttatcttatgtgggacatata 32589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 36986040 - 36986101
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  36986040 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 37011479 - 37011540
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  37011479 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 22304292 - 22304251
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  22304292 aacctttactattttatccgatgtgggacatataactcacac 22304251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 32462651 - 32462712
Alignment:
Q  26 tcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| ||||| | |||||| ||  || |||| |||||||||||||||||||    
T  32462651 tcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacac 32462712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 39914329 - 39914257
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||| || |||| ||| || ||||||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaa-cctctactgttttatctgatgtgagacatataactcacac 39914257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 8e-20; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 5443 - 5362
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  5443 aggcaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttctatccgatgtggaacatataactcacac 5362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 5068 - 4987
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||| | ||||||||||| | || ||||||||||| |||| |||||| || ||||||||| ||||||    
T  5068 aggcaatgagtttatgggtctttttacttataagatatt-aaacctttactgttctctccgatgtgagacatataattcacac 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 8e-20; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 7517666 - 7517585
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  7517666 aggcaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 7517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16569282 - 16569201
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| || ||||||||||||||||    
T  16569282 aggcaatgggtttatgggtcctcttacttataaggtattcaa-cctttactgttctatccgatgtgagacatataactcacac 16569201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 16596380 - 16596461
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||    
T  16596380 aggcaatgggtttatgggtcctcttacttataaggtattc-aacctttactgttctatccgatgtgagacatataactcacac 16596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37533082 - 37533163
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||||||||    
T  37533082 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataactcacac 37533163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 8128522 - 8128594
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  8128522 gtttatgggtcctcttacatataaggtgttcaa-cctttatttttctatccgatatgggacatataactcacac 8128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 1085688 - 1085769
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  1085688 aggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactattttatccgatgtgggacatataactcacac 1085769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 22566734 - 22566815
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||||    
T  22566734 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatattactcacac 22566815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 28301615 - 28301696
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||||  | |||||||||||||||||| || ||||||||||||||||    
T  28301615 aggcaatgggtttatgggtcctcttacttataaggtgttcag-cttttacttttctatccgatgtgagacatataactcacac 28301696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30244356 - 30244275
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  30244356 aggcaatgggtttatgagtcctcttacttataaggtcttcaa-cctttactcttttatccgatgtgggacatataactcacac 30244275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30245163 - 30245082
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||||    
T  30245163 aggcaatgagtttatgggtcgtcttacttataaggtgttc-aacctttactcttttatccgatgtggaacatataactcacac 30245082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 45434714 - 45434641
Alignment:
Q  13 agtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||    
T  45434714 agtttatgggtcctcttacttataaggtgttcaa-cctttacttttttatccgatgtgggacatataacttacac 45434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 7554111 - 7554030
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  7554111 aggctatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 7554030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 20599400 - 20599319
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||||| |||||| || || |  ||||||||||| ||||||||||||||||||||||||||||    
T  20599400 aggcaatgagtttatatgtcctcttatttataaagtgtttat-cctttacttttttatccgatatgggacatataactcacac 20599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 22567111 - 22567191
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||| | |||||||| ||||||||    
T  22567111 aggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgt-ggacatattactcacac 22567191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 23449 - 23529
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||||||    
T  23449 aggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattgtatccgatgtggaacatataactcaca 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 11845277 - 11845198
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    ||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11845277 aggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 24177521 - 24177443
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    |||||||| |||||| ||||| |||||||||||||| ||||  |||||||| || |||||||| ||||||||||||||||    
T  24177521 aggcaatgggtttatgggtccgcttacttataaggtgttcag-cctttactcttttatccgatgtgggacatataactca 24177443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 41910669 - 41910747
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||||| | ||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  41910669 caatgggtttatgggtcctctcagttataaggtattcaa-cctttactcttttatccgatgtgggacatataactcacac 41910747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 118377 - 118454
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| | ||||||||||||| |||| ||||| |||||||||||||||| ||| |||||||||||||| ||||    
T  118377 aatgggtttatggatcctcttacttattaggtgttcaa-cctttacttttctatctgatgtgggacatataacttacac 118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6054646 - 6054565
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| || ||||||||||| ||||    
T  6054646 aggcaatgtgtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtgagacatataactaacac 6054565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 29157651 - 29157570
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| |||| ||||||||||||||| ||||| |||||||| || |||||| | |||||||||||||||||||    
T  29157651 aggcaatggatttatgggtcgtcttacttataaggtgttcaa-cctttactattttatccggtgtgggacatataactcacac 29157570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36939805 - 36939886
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| |||||||||||||||||||| ||| ||| |||||| || ||| |||| |||||||||||||||||||    
T  36939805 aggcaatggatttatgggtcctcttacttataaggtgttc-aacttttactattttatacgatttgggacatataactcacac 36939886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 30245561 - 30245499
Alignment:
Q  24 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  30245561 cctcttacttataaggtgttcaa-cctttactcttttatctgatgtgggacatataactcacac 30245499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 30255406 - 30255344
Alignment:
Q  24 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||| |||||    
T  30255406 cctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataacgcacac 30255344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 43241578 - 43241500
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||  ||||| ||||||||||||| ||||| |||||| |||| |||||||| ||| |||||||||||||||    
T  43241578 caataagtttatgagtccttttacttataaggtgttcaa-cctttatttttttatccgatgtggaacatataactcacac 43241500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 30244771 - 30244706
Alignment:
Q  21 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| ||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 30244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 34218109 - 34218186
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    ||||| ||||||  ||||||| ||||||||||| ||||| | ||||||||| |||||||| || |||||||||||||||    
T  34218109 caatgggtttatgagtcctctcacttataaggtgttcaa-catttacttttttatccgatgtgagacatataactcaca 34218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 40094855 - 40094927
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||  |||||||||| || ||| |||| || ||||||||||||||||    
T  40094855 gtttatgggtcctcttacttataaggtgtt-gaacctttactcttttattcgatgtgagacatataactcacac 40094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 40230372 - 40230444
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||| | ||||| | ||||||||| ||| |||| |||||||||||||| ||||    
T  40230372 gtttatgggtcctcttacttataagatgttcaa-cttttacttttttattcgatgtgggacatataacttacac 40230444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 47129172 - 47129100
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||||   ||||| |||||||| || |||||||| || ||||||||||||||||    
T  47129172 gtttatgggtcctcttacttataagaggttcaa-cctttactattttatccgatgtgagacatataactcacac 47129100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1085320 - 1085391
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 77  Q
    ||||||||||||||| ||| ||||||||||| || | ||| ||| |||||| || ||||||||||||||||||    
T  1085320 aggcaatgagtttatgggttctcttacttatgagttgttc-aacttttactattttatccgatatgggacata 1085391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 36109007 - 36109070
Alignment:
Q  23 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||||| ||||| |||||||| || |||||||| || || |||||||||||||    
T  36109007 tcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgagaaatataactcacac 36109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 14681593 - 14681515
Alignment:
Q  8 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| || ||||||||||| ||||| ||||| |||||||| || |||| ||| |||||||||||||| ||||    
T  14681593 caatgggtttatgggccctcttacttacaaggtgttcaa-cctttactattttatctgatgtgggacatataacttacac 14681515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19122817 - 19122740
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 84  Q
    ||||||||  |||||  ||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||||||||||    
T  19122817 aggcaatggatttatgagtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 36534865 - 36534930
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 80  Q
    |||||| |||||||||||||||||||| ||| ||||| |||| || |||||||  ||||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttc-aacctctactgttttatccgaggtgggacatataa 36534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37533436 - 37533517
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || ||| | || | | |||||||||||||||    
T  37533436 aggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtagaacatataactcacac 37533517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 45433307 - 45433246
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||| ||||| |||||||| || |||||||| |||  ||||||||||||||    
T  45433307 ctcttacttataaggtgttcaa-cctttactcttttatccgatgtggatcatataactcacac 45433246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 30253578 - 30253537
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaa 46  Q
    ||||||||||||||| ||| |||||||||||||||| |||||    
T  30253578 aggcaatgagtttatgggttctcttacttataaggtcttcaa 30253537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 36623006 - 36622965
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  36623006 aacctttactattttatccgatgtgggacatataactcacac 36622965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 8e-20; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 26074698 - 26074617
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||    
T  26074698 aggcaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactcttttatccgatatggaacatataactcacac 26074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 36492293 - 36492370
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||    
T  36492293 aatgtgtttattggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatataactcacac 36492370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 299575 - 299494
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||| |||| ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  299575 aggctatgagtttatgggtcatcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacac 299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6224282 - 6224201
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||  |||||||||||||||||||    
T  6224282 aggcgatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgaagtgggacatataactcacac 6224201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 18603192 - 18603273
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||||||    
T  18603192 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacac 18603273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 40296387 - 40296468
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| ||||||| || || |||||||| |||||||||||||||||||    
T  40296387 aggcaatgggtttatgggtcctcttacttataaggtgttc-aaccttttctattttatccgatgtgggacatataactcacac 40296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 1028598 - 1028670
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||||||||||||| || ||||  |||||||||||||||||||| |||||||||||||||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcat-cctttacttttctatccgatgtgggacatataactcacac 1028670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 9498726 - 9498806
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||| ||| || |||||||||||||||    
T  9498726 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattctatctgatgtgagacatataactcaca 9498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 41170720 - 41170640
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 86  Q
    |||||||| |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| ||||||||||||||||||    
T  41170720 aggcaatgggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 41632859 - 41632787
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| ||||    
T  41632859 gtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataacttacac 41632787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 26075234 - 26075315
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||| ||||||    
T  26075234 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgagacatataaatcacac 26075315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 32487479 - 32487399
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  32487479 aggcaatgggtttatgggtcctcttacttata-ggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 32487399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36568639 - 36568720
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||  |||| ||| ||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||    
T  36568639 aggcaatgggtttacgggtcatctcacttataaggtgttcaa-cttttacttttctatccgatgtgggacatataactcacac 36568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 13415841 - 13415913
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| ||||||||  | |||||||| |||||||||||||||||||    
T  13415841 gtttatgggtcctcttacttataaggtgttcaa-cctttactaatttatccgatgtgggacatataactcacac 13415913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 26074395 - 26074323
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||||| | |||| ||||||||| ||| |||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatc-tttagttttctatctgatgtgggacatataactcacac 26074323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 11417049 - 11417128
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 85  Q
    |||||||| |||||| | |||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||||    
T  11417049 aggcaatgggtttatggatcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataactcac 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 3295087 - 3295160
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 79  Q
    |||||||| |||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| |||||||||||    
T  3295087 aggcaatgggtttatgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtgggacatata 3295160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6500536 - 6500456
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||  |||||||||||||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500536 aggcaatgggtttaaaggtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6500908 - 6500828
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||| ||| ||||||||| ||| |||||||||| || |||||||| | |||||||||||||||||    
T  6500908 aggcaatgagtttatgggtccttttatttataaggtgttc-aacctttactattttatccgatgt-ggacatataactcacac 6500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 26074218 - 26074299
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||| || ||||||||||| ||| |||| ||||| ||||||||||| |||||||| || ||||||||||||||||    
T  26074218 aggcaatgggttcatgggtcctcttacatatgaggtgttcaa-cctttacttttttatccgatgtgtgacatataactcacac 26074299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 27502108 - 27502189
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||  |||||| |||||||||||||||||||| || || |||||||| || ||||| || |||||||||||||||||||    
T  27502108 aggcaataggtttatgggtcctcttacttataaggtgtttaa-cctttactattttatccaatgtgggacatataactcacac 27502189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 25328012 - 25327940
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| | |||||||||||||||||    
T  25328012 gtttatgggtcctcttacttataaggtgttc-aacttttactgttttatccgatgtaggacatataactcacac 25327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 34753097 - 34753173
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 82  Q
    |||||||  |||||| |||| ||||||||||||||| ||||| | ||||||||||||||| || ||||||||||||||    
T  34753097 aggcaatcggtttatgggtcttcttacttataaggtgttcaa-cttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 15370175 - 15370104
Alignment:
Q  15 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||||||||||||||| | ||||| |||||||| || ||| |||| |||||||||||||||||||    
T  15370175 tttatgggtcctcttacttataagatgttcaa-cctttactattttattcgatgtgggacatataactcacac 15370104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 33747857 - 33747783
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 80  Q
    ||||||||||||||| | ||||||||||||||| || ||  |||||||||| || |||||||| ||||||||||||    
T  33747857 aggcaatgagtttatggatcctcttacttataaagtatt-taacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 3295416 - 3295489
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 79  Q
    |||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||    
T  3295416 aggcaattggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatata 3295489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 26590982 - 26591063
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| ||| ||||| | |||||||||||||||||| ||| |||||||||||||| || |||||||| |||| ||| ||||||    
T  26590982 aggcattgaatttatggatcctcttacttataaggtgttc-aacctttacttttcgattcgatatggaacatttaaatcacac 26591063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 31509709 - 31509628
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||  ||||||| |||||||| ||  |||| |||  ||||||||||||||| || ||||||||||||||||    
T  31509709 aggcaatgagtttatgagtcctctcacttataaagtgctcaa-cctccacttttctatccgatgtgagacatataactcacac 31509628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 35150073 - 35150012
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||| ||||| |||| ||| || |||||||| |||||||||||||||||||    
T  35150073 ctcttacttataaggtgttcaa-ccttgactcttttatccgatgtgggacatataactcacac 35150012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 38427610 - 38427553
Alignment:
Q  29 tacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| | ||||| ||||||||||||||||| || |||||||||||||||||||    
T  38427610 tacttataagatgttcaa-cctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 42508698 - 42508617
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  |||||||||||||| || | || || |||||||||||||||||||| ||||| |||||| ||||||    
T  42508698 aggcaatgggtttatgagtcctcttacttattagatgtttaa-cctttacttttctatccgatgtgggatatataattcacac 42508617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 26074863 - 26074935
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| ||||||| ||||||||  || ||||| |||||||| || |||||||| |||||||||||||||||||    
T  26074863 gtttatgggtcctcctacttatattgtgttcaa-cctttactcttttatccgatgtgggacatataactcacac 26074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 24489278 - 24489357
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||  ||||||| ||||||| || || ||||| |||||||||| ||| |||||||||||||||||||    
T  24489278 aggcaatgggtttatgggt--tcttactaataaggtgtttaa-ccttttcttttctatctgatgtgggacatataactcacac 24489357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 301025 - 300964
Alignment:
Q  25 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||| |||||    
T  301025 ctcttacttataaggtattcaa-cctttactgttttatctgatgtgggacatataacccacac 300964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 624282 - 624201
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| |||| |||||||||||| || ||||| |||||||| || ||| | || |||||||||||||||||||    
T  624282 aggctatgggtttatgggtcatcttacttataacgtgttcaa-cctttactattttatacaatgtgggacatataactcacac 624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 2411093 - 2411012
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||| ||||||| ||| |||||||||| ||| | ||||| | ||||||| ||||||| || | |||||||||||||||||    
T  2411093 aggcaataagtttatgggttctcttacttacaagatgttcaa-cttttacttctctatccaatgtaggacatataactcacac 2411012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 29549331 - 29549408
Alignment:
Q  9 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| |||||| |||| ||||||||||| ||| ||||  |||||||| || |||| ||||||| |||||||||||||||    
T  29549331 aatgtgtttatgggtcttcttacttatatggtgttcat-cctttactattttatctgatatggaacatataactcacac 29549408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 12662764 - 12662805
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  12662764 aacctttactattttatccgatgtgggacatataactcacac 12662805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 42405685 - 42405749
Alignment:
Q  22 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||| |||||| |||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  42405685 gtccttttacttgtaaggtgttcaa-cctttactattttatccgatgttggacatataactcacac 42405749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 5863 - 5782
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||||||||||    
T  5863 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgcgacatataactcacac 5782  T

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Target: scaffold0734; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 5473 - 5401
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || |||||||| | |||||||||||||||||    
T  5473 gtttatgggccctcttacttataaggtgttcaa-cctttactattttatccgatgtaggacatataactcacac 5401  T

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Target: scaffold0702 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 586 - 667
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || || ||||| |||||||||||||||||||    
T  586 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttaaccgatgtgggacatataactcacac 667  T

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Target: scaffold0702; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 229 - 295
Alignment:
Q  20 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||    
T  229 tggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacac 295  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 1178 - 1259
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||| ||||||  ||||| || |||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||    
T  1178 aggcaatgggtttatgagtcctttttcttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacac 1259  T

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Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 3097 - 3138
Alignment:
Q  46 aacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  3097 aacctttactcttttatccgatgtgggacatataactcacac 3138  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 17528 - 17609
Alignment:
Q  5 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||| ||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| || ||||||||||||||||    
T  17528 aggctatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtgtgacatataactcacac 17609  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 10192 - 10264
Alignment:
Q  14 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 87  Q
    |||||| |||||||||||||||||||| ||| ||| |||||  || |||||||| || ||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttc-aacttttaccattttatccgatgtgagacatataactcacac 10264  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 39877 - 39843
Alignment:
Q  53 acttttctatccgatatgggacatataactcacac 87  Q
    ||||||||||||||| |||||||||||||||||||    
T  39877 acttttctatccgatgtgggacatataactcacac 39843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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