View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11992_low_11 (Length: 430)

Name: NF11992_low_11
Description: NF11992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11992_low_11
NF11992_low_11
[»] chr4 (24 HSPs)
chr4 (89-421)||(30479745-30480073)
chr4 (1-93)||(30480273-30480365)
chr4 (247-359)||(4800341-4800453)
chr4 (1-69)||(55007920-55007988)
chr4 (4-66)||(53540467-53540529)
chr4 (1-69)||(34208309-34208377)
chr4 (7-67)||(34379579-34379639)
chr4 (1-68)||(34233064-34233131)
chr4 (1-42)||(51421931-51421972)
chr4 (1-69)||(30621241-30621309)
chr4 (1-65)||(51438623-51438687)
chr4 (1-68)||(20105558-20105625)
chr4 (1-60)||(20601692-20601751)
chr4 (1-68)||(25574999-25575066)
chr4 (1-39)||(3979124-3979162)
chr4 (3-69)||(53518365-53518431)
chr4 (1-46)||(12443292-12443337)
chr4 (1-46)||(39708630-39708675)
chr4 (4-68)||(5306471-5306535)
chr4 (6-62)||(20863820-20863876)
chr4 (27-63)||(21945704-21945740)
chr4 (8-60)||(46749730-46749782)
chr4 (1-65)||(54935327-54935391)
chr4 (2-66)||(55388252-55388316)
[»] chr2 (21 HSPs)
chr2 (243-410)||(4142011-4142178)
chr2 (247-410)||(38859183-38859346)
chr2 (243-382)||(4145639-4145778)
chr2 (1-69)||(19336933-19337001)
chr2 (1-69)||(26670942-26671010)
chr2 (1-69)||(6219139-6219207)
chr2 (1-69)||(9496040-9496108)
chr2 (1-68)||(36650617-36650684)
chr2 (1-66)||(18959088-18959153)
chr2 (1-68)||(33287596-33287663)
chr2 (1-68)||(36616863-36616930)
chr2 (27-70)||(37452292-37452335)
chr2 (1-63)||(36366816-36366878)
chr2 (1-46)||(3481351-3481396)
chr2 (1-46)||(9531640-9531685)
chr2 (3-68)||(23915735-23915800)
chr2 (1-72)||(11412878-11412952)
chr2 (1-69)||(12882085-12882153)
chr2 (1-45)||(18424417-18424461)
chr2 (3-89)||(35755287-35755370)
chr2 (30-66)||(37363055-37363091)
[»] chr3 (25 HSPs)
chr3 (1-66)||(54365015-54365080)
chr3 (1-69)||(23534610-23534678)
chr3 (1-69)||(29601066-29601134)
chr3 (5-69)||(40116382-40116446)
chr3 (1-65)||(40991609-40991673)
chr3 (1-68)||(36304141-36304208)
chr3 (1-46)||(39208805-39208850)
chr3 (1-68)||(41842563-41842630)
chr3 (1-60)||(42510056-42510115)
chr3 (1-69)||(48508409-48508477)
chr3 (1-63)||(49888370-49888429)
chr3 (1-69)||(54128553-54128621)
chr3 (7-66)||(41482183-41482242)
chr3 (2-69)||(45289132-45289199)
chr3 (27-69)||(40116534-40116576)
chr3 (7-45)||(51027756-51027794)
chr3 (1-46)||(24541372-24541417)
chr3 (1-46)||(38850318-38850363)
chr3 (1-46)||(40106660-40106705)
chr3 (1-69)||(388302-388370)
chr3 (1-69)||(19758061-19758129)
chr3 (4-68)||(29475861-29475925)
chr3 (1-45)||(45486889-45486933)
chr3 (1-65)||(49841794-49841858)
chr3 (277-417)||(49917452-49917592)
[»] chr8 (27 HSPs)
chr8 (1-69)||(33076298-33076366)
chr8 (1-65)||(35914641-35914705)
chr8 (1-66)||(14459072-14459137)
chr8 (1-69)||(29520823-29520891)
chr8 (1-69)||(30559867-30559935)
chr8 (1-69)||(43904705-43904773)
chr8 (1-66)||(17491694-17491759)
chr8 (1-66)||(36143518-36143583)
chr8 (1-69)||(490509-490577)
chr8 (1-61)||(14903743-14903803)
chr8 (3-63)||(35362692-35362752)
chr8 (1-66)||(10824229-10824294)
chr8 (1-66)||(24399829-24399894)
chr8 (1-69)||(31715994-31716062)
chr8 (13-69)||(41971842-41971898)
chr8 (7-46)||(42584556-42584595)
chr8 (4-66)||(28169569-28169631)
chr8 (1-46)||(16035767-16035812)
chr8 (1-46)||(29736004-29736049)
chr8 (4-69)||(36069776-36069841)
chr8 (1-65)||(18737178-18737242)
chr8 (1-65)||(18742063-18742127)
chr8 (1-65)||(18747027-18747091)
chr8 (1-69)||(24558657-24558725)
chr8 (2-46)||(38391934-38391978)
chr8 (1-69)||(41444379-41444447)
chr8 (27-63)||(43350794-43350830)
[»] chr7 (22 HSPs)
chr7 (1-65)||(36101817-36101881)
chr7 (3-69)||(47796194-47796260)
chr7 (1-46)||(26332913-26332958)
chr7 (4-69)||(38135256-38135321)
chr7 (1-69)||(28627973-28628041)
chr7 (1-68)||(1569191-1569258)
chr7 (1-47)||(44401167-44401213)
chr7 (1-46)||(31681060-31681105)
chr7 (1-46)||(34926562-34926607)
chr7 (1-46)||(46938818-46938863)
chr7 (1-69)||(9210744-9210812)
chr7 (1-69)||(14057652-14057720)
chr7 (1-69)||(14367680-14367748)
chr7 (1-69)||(36239836-36239904)
chr7 (1-60)||(26741934-26741993)
chr7 (9-68)||(34341443-34341502)
chr7 (1-68)||(45601651-45601718)
chr7 (1-46)||(30814165-30814210)
chr7 (4-69)||(40391866-40391931)
chr7 (1-46)||(40979968-40980013)
chr7 (1-69)||(27893603-27893671)
chr7 (1-69)||(37976409-37976477)
[»] chr1 (36 HSPs)
chr1 (1-67)||(25715366-25715432)
chr1 (1-69)||(43375638-43375706)
chr1 (1-69)||(52900682-52900750)
chr1 (1-68)||(6084150-6084217)
chr1 (1-66)||(28511841-28511906)
chr1 (1-69)||(27072527-27072595)
chr1 (1-69)||(41560403-41560471)
chr1 (1-69)||(52532656-52532724)
chr1 (1-60)||(40568450-40568509)
chr1 (1-63)||(5275245-5275307)
chr1 (27-69)||(15438859-15438901)
chr1 (1-46)||(19822085-19822130)
chr1 (1-46)||(28090734-28090779)
chr1 (7-68)||(31274447-31274508)
chr1 (1-69)||(9599434-9599502)
chr1 (1-69)||(19908075-19908143)
chr1 (1-69)||(19908424-19908492)
chr1 (1-69)||(37462916-37462983)
chr1 (1-69)||(48865747-48865815)
chr1 (1-68)||(8796384-8796451)
chr1 (11-62)||(51812690-51812741)
chr1 (1-47)||(50257766-50257812)
chr1 (1-47)||(52981447-52981493)
chr1 (1-69)||(8676902-8676973)
chr1 (1-46)||(12930351-12930396)
chr1 (1-62)||(19936641-19936702)
chr1 (1-46)||(21769751-21769796)
chr1 (1-46)||(39318326-39318371)
chr1 (2-46)||(1290072-1290116)
chr1 (1-61)||(9509500-9509560)
chr1 (1-69)||(16142020-16142088)
chr1 (1-69)||(27520247-27520315)
chr1 (1-69)||(27847840-27847908)
chr1 (5-69)||(31979646-31979710)
chr1 (1-69)||(32404566-32404634)
chr1 (1-69)||(35672859-35672927)
[»] chr6 (13 HSPs)
chr6 (1-65)||(34545-34609)
chr6 (4-89)||(9568853-9568938)
chr6 (1-66)||(31818708-31818773)
chr6 (1-69)||(5897631-5897699)
chr6 (1-69)||(8364730-8364798)
chr6 (1-62)||(5096015-5096076)
chr6 (1-46)||(7513030-7513075)
chr6 (1-69)||(30031430-30031498)
chr6 (1-60)||(12890758-12890817)
chr6 (2-69)||(14389202-14389269)
chr6 (1-46)||(608358-608403)
chr6 (1-46)||(1911577-1911622)
chr6 (7-43)||(30700437-30700473)
[»] chr5 (13 HSPs)
chr5 (7-69)||(32516729-32516791)
chr5 (1-69)||(418074-418142)
chr5 (1-69)||(6889167-6889235)
chr5 (4-68)||(20367068-20367132)
chr5 (1-68)||(9235222-9235289)
chr5 (1-68)||(14667946-14668013)
chr5 (7-46)||(42504293-42504332)
chr5 (1-63)||(6788247-6788309)
chr5 (2-59)||(7593725-7593782)
chr5 (1-69)||(11675703-11675772)
chr5 (8-69)||(35615457-35615518)
chr5 (1-69)||(29922458-29922526)
chr5 (1-41)||(39668905-39668945)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-66)||(58266-58331)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-46)||(48156-48201)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-63)||(160372-160426)
[»] scaffold0491 (1 HSPs)
scaffold0491 (1-65)||(3868-3932)
[»] scaffold0245 (1 HSPs)
scaffold0245 (2-46)||(16477-16521)


Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-159; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 89 - 421
Target Start/End: Complemental strand, 30480073 - 30479745
Alignment:
Q  89 atttttgaaaacaaaaccaaatcatttcacgcttaagagaaaacacataaccaagcatgacccaggtaattttttatattgagtttcattgtttcactca 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30480073 atttttgaaaacaaaaccaaatcatttcacgcttaagagaaaacacataactaagcatgacccaggtaattttttatattgagtttcattgtttcactca 30479974  T
Q  189 taatttttgaaaaagctaaaattttgataatacccacccataaagnnnnnnnnntacctcataagcttcagaaatttgcttgaacttagcttcagcatct 288  Q
    ||||||||||||||||||||||||||||||||||||    |||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  30479973 taatttttgaaaaagctaaaattttgataataccca----taaagaaaaaaaaatacctcataagcttcagaaatttgcttgaacttagcttcagcatct 30479878  T
Q  289 tttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataagctttcttgagttcatcgtcgttggcattcttatcaacctgcaaga 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30479877 tttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataagctttcttgagttcatcgtcgttggcattcttatcaacctgcaaga 30479778  T
Q  389 ttttgtagtagtctacacccatttcttctctct 421  Q
    |||||||||||||||||||||||||||||||||    
T  30479777 ttttgtagtagtctacacccatttcttctctct 30479745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30480365 - 30480273
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaatctctaaatctttcttaatatttt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  30480365 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtccaattcattaatctctaatctctaaatctttcttaatatttt 30480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 359
Target Start/End: Original strand, 4800341 - 4800453
Alignment:
Q  247 tcataagcttcagaaatttgcttgaacttagcttcagcatcttttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataagctt 346  Q
    |||||||||||||| |||  |||||| || |||||||||||||| |||||  | || || |||||||| ||||||||||| |||||||||| ||||||||    
T  4800341 tcataagcttcagagattgtcttgaatttggcttcagcatctttcttgttattagggttcttatcaggatgccatttcatagcaagtttccgataagctt 4800440  T
Q  347 tcttgagttcatc 359  Q
    ||||||| |||||    
T  4800441 tcttgagatcatc 4800453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55007988 - 55007920
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||||||||||   |||||||||||||||||||  ||| |||||||||||||||||    
T  55007988 tacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcattaatctctaa 55007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 53540529 - 53540467
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||||||||||| | |||||  ||||||||||||||||||||| ||| ||||||||||||||    
T  53540529 atggatcaaattatgccataatgttctatcataaaccatatttttgtccaactcattaatctc 53540467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34208309 - 34208377
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| || |||||  ||||||||||||||||||||   || |||||||||||||||||    
T  34208309 tacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcattaatctctaa 34208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 34379639 - 34379579
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctct 67  Q
    |||||| ||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||    
T  34379639 gatcaagttacgccataatattctatcataaaccatatttcggtccaactcattaatctct 34379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34233064 - 34233131
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    ||||||||||||||||||  | ||  |||||||||||||| ||||||  |||||||||||||||||||    
T  34233064 tacatggatcaaattacgctacaatgttctatcataaaccttattttgatctaactcattaatctcta 34233131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51421972 - 51421931
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccat 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  51421972 tacatggatcaaattacgtcataatgttctatcataaaccat 51421931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30621241 - 30621309
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||| ||| | |||||  ||||||||||||||||||||  ||| ||| |||||||||||||    
T  30621241 tacatggatcaagttaagccataatgttctatcataaaccatatttcggtccaacacattaatctctaa 30621309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51438687 - 51438623
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||||| |||||  || ||| ||||||||||||| | || |||||||||||||    
T  51438687 tacatggatcaaattacgccataatgttatattataaaccatatttcattccaactcattaatct 51438623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20105558 - 20105625
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||| ||| |||||  | |||||||| ||||||||| |||| ||||||| ||||||||    
T  20105558 tacatggatcaaatgacgccataatgtcctatcatataccatatttcagtccaactcatcaatctcta 20105625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20601692 - 20601751
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    |||||| |||||||||||||||||  |||||||||||| ||||||| | || ||||||||    
T  20601692 tacatgaatcaaattacgtcataatgttctatcataaatcatatttgaatccaactcatt 20601751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25575066 - 25574999
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||  || ||  ||||||||||||||||||||   || ||||||||||||||||    
T  25575066 tacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcattaatctcta 25574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3979162 - 3979124
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  3979162 tacatggatcaaattacgtcataatgttctatcataaac 3979124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 53518365 - 53518431
Alignment:
Q  3 catggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||| ||||   ||||||||||||||||||||   || |||||||||| ||||||    
T  53518365 catggatcaaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaa 53518431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12443337 - 12443292
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||    
T  12443337 tacatggatcaaattatgccataatgttctatcataaaccatattt 12443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39708675 - 39708630
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||    
T  39708675 tacatggatcaaattacgacatagtgttctatcataaaccatattt 39708630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 5306535 - 5306471
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    ||||||||||||||| |||||  || | |||||||||||||||   || ||||||||||||||||    
T  5306535 atggatcaaattacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 20863876 - 20863820
Alignment:
Q  6 ggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaa 62  Q
    ||||||||||||| ||||| ||||||||||  |||||||||  ||| ||||||||||    
T  20863876 ggatcaaattacgccataatattctatcattcaccatatttcggtccaactcattaa 20863820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 21945704 - 21945740
Alignment:
Q  27 ttctatcataaaccatattttagtctaactcattaat 63  Q
    |||||||||||||||||||| |||| |||||||||||    
T  21945704 ttctatcataaaccatatttcagtccaactcattaat 21945740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 46749782 - 46749730
Alignment:
Q  8 atcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    ||||||||||||||||| ||| ||||||||| ||||||| | || ||||||||    
T  46749782 atcaaattacgtcataatattttatcataaatcatatttgaatccaactcatt 46749730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54935391 - 54935327
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||| || ||||  |||||||||||||||||| || ||| ||| | |||||||    
T  54935391 tacatggatcaaattatgttataatgttctatcataaaccatatcttggtccaacacgttaatct 54935327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 55388252 - 55388316
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||||||||||||||  || ||  |||||||||||| |||||||   |||||||||||||||||    
T  55388252 acatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaatctc 55388316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 410
Target Start/End: Complemental strand, 4142178 - 4142011
Alignment:
Q  243 tacctcataagcttcagaaatttgcttgaacttagcttcagcatcttttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataa 342  Q
    ||||||||||||||| || || |  ||||| || |||||||| |||||||| || |  ||||| ||||||||||||||||||||||||||||| || |||    
T  4142178 tacctcataagcttcggatatctctttgaatttggcttcagcgtcttttttatttgagggattcttatcagggtgccatttcatggcaagttttctgtaa 4142079  T
Q  343 gctttcttgagttcatcgtcgttggcattcttatcaacctgcaagattttgtagtagtctacacccat 410  Q
    |||||||| |  || || ||  |||||||||| ||||||| ||| || |||||||||||||| |||||    
T  4142078 gctttcttcaactcttcttctgtggcattcttgtcaaccttcaaaatcttgtagtagtctacccccat 4142011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 410
Target Start/End: Complemental strand, 38859346 - 38859183
Alignment:
Q  247 tcataagcttcagaaatttgcttgaacttagcttcagcatcttttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataagctt 346  Q
    ||||||||||| || |||||||| || || |||||||| |||||||||||  | || || |||||||| ||||| |||||||| ||||| || |||||||    
T  38859346 tcataagcttctgagatttgcttaaatttggcttcagcttcttttttgttattagggttcttatcaggatgccacttcatggcgagttttctgtaagctt 38859247  T
Q  347 tcttgagttcatcgtcgttggcattcttatcaacctgcaagattttgtagtagtctacacccat 410  Q
    |||| |  |||||||| ||||| |||  |||||||||||  |  ||||||||||| ||||||||    
T  38859246 tcttcaagtcatcgtctttggcgttccgatcaacctgcagaagcttgtagtagtcaacacccat 38859183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 382
Target Start/End: Complemental strand, 4145778 - 4145639
Alignment:
Q  243 tacctcataagcttcagaaatttgcttgaacttagcttcagcatcttttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataa 342  Q
    ||||||||| |||||||| ||  | ||||| ||||  |||||||| || || |||   ||||| || |||||||||||||||||||||||||| |||||     
T  4145778 tacctcatatgcttcagatatgagtttgaatttagtctcagcatcattcttattgtcaggattcttgtcagggtgccatttcatggcaagttttctatat 4145679  T
Q  343 gctttcttgagttcatcgtcgttggcattcttatcaacct 382  Q
    |||||||| | |||||||||  |||||||||| |||||||    
T  4145678 gctttcttcaattcatcgtctgtggcattcttgtcaacct 4145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19336933 - 19337001
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||   || |||||||||||||||||    
T  19336933 tacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaa 19337001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26671010 - 26670942
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||  ||| | ||||||||||||| |||||||| ||| |||||||||||||||||    
T  26671010 tacatggatcaaattacaccattatattctatcataaatcatattttggtccaactcattaatctctaa 26670942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6219207 - 6219139
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||  |||||  ||||||||||||||||||||  ||| |||||| ||||||||||    
T  6219207 tacatggatcaaattacaccataatgttctatcataaaccatatttcggtccaactcactaatctctaa 6219139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9496108 - 9496040
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||   || |||||||||| ||||||    
T  9496108 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaacctctaa 9496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36650684 - 36650617
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||| |||||||||||||| |||   ||||||||||||| |||||||  |||||||||||||||||||    
T  36650684 tacacggatcaaattacgttatagtgttctatcataaactatattttgatctaactcattaatctcta 36650617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18959153 - 18959088
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||||||| | |||||  |||||||||| ||||||||||  || ||||||||||||||    
T  18959153 tacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcattaatctc 18959088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33287663 - 33287596
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||| |||||||| || |||||||  ||||||||||||||||||||   |||||||||||||| ||||    
T  33287663 tacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactcattaatttcta 33287596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36616930 - 36616863
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||| |||||||||||| | |||   ||||||||||||| |||||||  |||||||||||||||||||    
T  36616930 tacacggatcaaattacattatagtgttctatcataaactatattttgatctaactcattaatctcta 36616863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 37452292 - 37452335
Alignment:
Q  27 ttctatcataaaccatattttagtctaactcattaatctctaat 70  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||    
T  37452292 ttctatcataaaccatatttctgtccaactcattaatctctaat 37452335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36366878 - 36366816
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    |||||||||||||||||  |||||  |||||| |||||||||||||  ||| |||||||||||    
T  36366878 tacatggatcaaattacaccataatgttctattataaaccatatttcggtccaactcattaat 36366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3481396 - 3481351
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  |||||||||| |||||||||    
T  3481396 tacatggatcaaattacgccataatgttctatcatagaccatattt 3481351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9531640 - 9531685
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||    
T  9531640 tacatggatcaaattacgccataatgttccatcataaaccatattt 9531685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 23915735 - 23915800
Alignment:
Q  3 catggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||| ||||   ||||||||||||||||| ||  ||| | ||||||||||||||    
T  23915735 catggatcaaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctcta 23915800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11412952 - 11412878
Alignment:
Q  1 tacatggatcaaattacgtcataaaatt---ctatcataaaccatattttagtctaactcattaatctctaatct 72  Q
    |||||||||||||||||  |||||  ||   ||||||||||||||||||   || ||||||||||||||||||||    
T  11412952 tacatggatcaaattacaccataatgttctactatcataaaccatatttggatccaactcattaatctctaatct 11412878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12882085 - 12882153
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| || ||  |||||||| |||||||||||   || |||||||||| ||||||    
T  12882085 tacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacctctaa 12882153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18424417 - 18424461
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatatt 45  Q
    |||||||||||||| ||||||||   |||||||||||||||||||    
T  18424417 tacatggatcaaatgacgtcatagtgttctatcataaaccatatt 18424461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 35755287 - 35755370
Alignment:
Q  3 catggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaatctctaaatctttcttaata 89  Q
    |||||||||||||||| || ||  ||||||||||||||||||||   || ||| |||||||   ||| ||||||||||||| |||||    
T  35755287 catggatcaaattacggcacaatgttctatcataaaccatatttggatccaacccattaat---taacctctaaatctttcctaata 35755370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 37363055 - 37363091
Alignment:
Q  30 tatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  37363055 tatcataaatcatactttagtctaactcattaatctc 37363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 54365015 - 54365080
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||||||||||||||   ||||||||||||||||||||| ||||||| ||||||||||    
T  54365015 tacatggatcaaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctc 54365080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23534610 - 23534678
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  |||||||||||| ||||||  |||| |||||||||||||||||    
T  23534610 tacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaa 23534678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29601134 - 29601066
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||||| | || |||||||||||||||||    
T  29601134 tacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaa 29601066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 40116382 - 40116446
Alignment:
Q  5 tggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||| |||||  ||||||||||||||||||||  ||| |||||||||||||||||    
T  40116382 tggatcaaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaa 40116446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40991673 - 40991609
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||||    
T  40991673 tacatggatcaaattacaccataatgttctatcataaaccatattttggtccaactcattaatct 40991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36304208 - 36304141
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||  || ||||||||||||||||    
T  36304208 tacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctcta 36304141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39208850 - 39208805
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  39208850 tacatggatcaaattacgtcataatgttctatcataaaccatattt 39208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41842563 - 41842630
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||  |||||  |||||||| ||||||||||| | ||||||||||||| |||||    
T  41842563 tacatggatcaaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctcta 41842630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42510056 - 42510115
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||| ||| ||||||||    
T  42510056 tacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcatt 42510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48508477 - 48508409
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| | || |||||||| | ||||||    
T  48508477 tacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattgacctctaa 48508409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49888429 - 49888370
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    ||||||||||||||||||||||||  ||   ||||||||||||||| |||| |||||||||||    
T  49888429 tacatggatcaaattacgtcataatgtt---tcataaaccatatttcagtccaactcattaat 49888370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 54128621 - 54128553
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||  ||| |||||||| | ||||||    
T  54128621 tacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattgacctctaa 54128553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 41482183 - 41482242
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||  ||||||||||||||    
T  41482183 gatcaaattacgccataatgttctatcataaaccagattttggttcaactcattaatctc 41482242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 45289132 - 45289199
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| |  ||||  ||||||||||||||||||||   || |||||||||||||||||    
T  45289132 acatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaatctctaa 45289199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 40116534 - 40116576
Alignment:
Q  27 ttctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  40116534 ttctatcataaaccatatttcggtccaactcattaatctctaa 40116576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 51027794 - 51027756
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatatt 45  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  51027794 gatcaaattacgtcataatgttctatcataaaccatatt 51027756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24541372 - 24541417
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||    
T  24541372 tacatggatcaaattacgccataatgttctatcctaaaccatattt 24541417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38850363 - 38850318
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||||||||   ||||||||||||||| ||||    
T  38850363 tacatggatcaaattacgtcatagtgttctatcataaaccaaattt 38850318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40106660 - 40106705
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||| |||||||||| |||||||  ||||||||||||||||||||    
T  40106660 tacattgatcaaattatgtcataatgttctatcataaaccatattt 40106705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 388302 - 388370
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||| ||||||||||||||||||   ||||||||| ||| |||||   ||| ||||||||||||||||    
T  388302 tacattgatcaaattacgtcataatgctctatcatataccgtatttctatcttactcattaatctctaa 388370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19758129 - 19758061
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||   |||||  |||||||||||||||||||    || |||||||||||||||||    
T  19758129 tacatggatcaaattataccataatgttctatcataaaccatattgagatccaactcattaatctctaa 19758061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29475925 - 29475861
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||| |||||||||| ||||   ||||||||||||| |||||| | || ||||||||||||||||    
T  29475925 atgggtcaaattacgccatagttttctatcataaacaatatttcaatccaactcattaatctcta 29475861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45486889 - 45486933
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatatt 45  Q
    |||||||||||||||| | |||||  |||||||||||||||||||    
T  45486889 tacatggatcaaattatgccataatgttctatcataaaccatatt 45486933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49841858 - 49841794
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||| | |||||  |||||||||| |||||||||   || |||||||||||||    
T  49841858 tacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactcattaatct 49841794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 417
Target Start/End: Original strand, 49917452 - 49917592
Alignment:
Q  277 gcttcagcatcttttttgttggttggatttttatcagggtgccatttcatggcaagtttcctataagctttcttgagttcatcgtcgttggcattcttat 376  Q
    |||||||| |||||||| ||| | || || || ||||||||||||||||| || | ||| ||||| |||||||| |  ||||| ||  | ||||| ||||    
T  49917452 gcttcagcttcttttttattgttagggttcttgtcagggtgccatttcatagccaattttctatatgctttcttcaaatcatcttctgtagcatttttat 49917551  T
Q  377 caacctgcaagattttgtagtagtctacacccatttcttct 417  Q
    | |||| ||| || || ||||| || |||||||||| ||||    
T  49917552 ccaccttcaaaatgttatagtaatccacacccattttttct 49917592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33076366 - 33076298
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||| ||  |||||||||||||||||    
T  33076366 tacatggatcaaattacatcataatattctattataaaccatattttggtacaactcattaatctctaa 33076298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35914641 - 35914705
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| ||| |||||||||||||    
T  35914641 tacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcattaatct 35914705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14459137 - 14459072
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||||||||  |||||  ||| ||||||||||||||||| ||||||||||||||||||    
T  14459137 tacatggatcaaattacaccataatgttccatcataaaccatattttggtctaactcattaatctc 14459072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29520891 - 29520823
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||   || |||||||||||||||||    
T  29520891 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaatctctaa 29520823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30559935 - 30559867
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |   || |||||||||||||||||    
T  30559935 tacatggatcaaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaa 30559867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43904705 - 43904773
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||   || |||||||||||||||||    
T  43904705 tacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaa 43904773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17491694 - 17491759
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||||||||||  |||| |||||  ||||||||||||||||||||| ||| ||||||||||||||    
T  17491694 tacatggatcaacatacgccataatgttctatcataaaccatattttggtccaactcattaatctc 17491759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36143583 - 36143518
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||||||||| || |||||||||  ||||||||||||||||||||| ||| || |||||||||||    
T  36143583 tacatggatcagatgacgtcataatgttctatcataaaccatattttggtcgaattcattaatctc 36143518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 490577 - 490509
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||   || ||||||| |||||||||    
T  490577 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatcaatctctaa 490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14903803 - 14903743
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatta 61  Q
    |||||||||||||||||| |||||  | |||||||||||| |||||| |||||||||||||    
T  14903803 tacatggatcaaattacgccataatgtcctatcataaaccttattttggtctaactcatta 14903743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 35362692 - 35362752
Alignment:
Q  3 catggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    |||||||||||||||| |||||  |||||||||| ||||||||| |||| |||||||||||    
T  35362692 catggatcaaattacgccataatgttctatcatacaccatatttcagtccaactcattaat 35362752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10824229 - 10824294
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||| |||| ||||||  |||||||| |||||||||||| ||| || |||||||||||    
T  10824229 tacatggatcaacttacttcataatgttctatcaaaaaccatattttggtccaattcattaatctc 10824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24399829 - 24399894
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||| || ||||| || |||||| ||||||||||||||||||||| | || ||||||||||||||    
T  24399829 tacatagaacaaatgacatcataatattctatcataaaccatatttcaatccaactcattaatctc 24399894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31716062 - 31715994
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||   || |||| ||||||||||||    
T  31716062 tacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaactaattaatctctaa 31715994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 41971842 - 41971898
Alignment:
Q  13 attacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||| |||||||  ||||||||||||| |||||| |||| |||||||||||||||||    
T  41971842 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaa 41971898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 42584595 - 42584556
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  42584595 gatcaaattacgtcataatgttctatcataaaccatattt 42584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 28169631 - 28169569
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||| |||||||  ||||| ||| ||||||||||||||||| | || ||||||||||||||    
T  28169631 atggataaaattacaccataatattttatcataaaccatatttgaatccaactcattaatctc 28169569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16035767 - 16035812
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||    
T  16035767 tacatgaatcaaattacgtcataatgttctaccataaaccatattt 16035812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29736049 - 29736004
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||| |||||||||||||||||| ||| |||||||| |||||||    
T  29736049 tacatgaatcaaattacgtcataaagttcaatcataaatcatattt 29736004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36069841 - 36069776
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| | |||  ||||||||||||||||||||    | |||||||||||||||||    
T  36069841 atggatcaaattacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaa 36069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18737178 - 18737242
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    ||||| |||||||||| | | |||  ||| |||||||||||||||||| || |||||||||||||    
T  18737178 tacattgatcaaattaagccttaatgttcgatcataaaccatattttaatccaactcattaatct 18737242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18742063 - 18742127
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    ||||| |||||||||| | | |||  ||| |||||||||||||||||| || |||||||||||||    
T  18742063 tacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 18742127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18747027 - 18747091
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    ||||| |||||||||| | | |||  ||| |||||||||||||||||| || |||||||||||||    
T  18747027 tacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 18747091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24558725 - 24558657
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||||||||||  ||||||| | ||||||   | |||| | |||||||||||||||    
T  24558725 tacatggatcaaattacgtcataatgttctatcgttaaccatgactcagtccagctcattaatctctaa 24558657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 38391934 - 38391978
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||| |||||||| ||||| ||||||||||| |||||||||    
T  38391934 acatggatgaaattacgccataatattctatcatataccatattt 38391978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41444379 - 41444447
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||| |||||||||||  |||  || ||||||||||||||||||  || ||| |||||||||||||    
T  41444379 tacatggttcaaattacgttgtaatgttatatcataaaccatattttgatcaaacccattaatctctaa 41444447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 43350794 - 43350830
Alignment:
Q  27 ttctatcataaaccatattttagtctaactcattaat 63  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  43350794 ttctatcataaaccatattttggtccaactcattaat 43350830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36101817 - 36101881
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||  || |||||||||||||    
T  36101817 tacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcattaatct 36101881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 47796194 - 47796260
Alignment:
Q  3 catggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||| |||| |||||| |||||    
T  47796194 catggatcaaattacgccataatattctatcataaaccatatttcagtccaacttattaatttctaa 47796260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26332913 - 26332958
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  26332913 tacatggatcaaattacgtcataatattctatcataaaccatattt 26332958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 38135256 - 38135321
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||  ||| |||||||||||||||||    
T  38135256 atggatcaaattacgccataatattctatcataacccatatttcggtccaactcattaatctctaa 38135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28627973 - 28628041
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||| ||||   || |||||||||||||||||    
T  28627973 tacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaa 28628041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1569258 - 1569191
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    ||||| |||||||||||| | |||  |||||||||||||||||||||  || ||||||||||||||||    
T  1569258 tacatcgatcaaattacgccgtaatgttctatcataaaccatattttgatccaactcattaatctcta 1569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44401167 - 44401213
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatatttt 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44401167 tacatggatcaaattacgtcataatgttctatcataaaacatatttt 44401213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31681060 - 31681105
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||    
T  31681060 tacatggatcaaattacgtcatagtattctatcataagccatattt 31681105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34926562 - 34926607
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||    
T  34926562 tacatggatcaaattacgccattaagttctatcataaaccatattt 34926607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46938818 - 46938863
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||    
T  46938818 tacatgtatcaaattacgtcataatattatatcataaaccatattt 46938863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9210744 - 9210812
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  || |||||||||||||||||   || |||||||||| ||||||    
T  9210744 tacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcattaacctctaa 9210812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14057720 - 14057652
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||  |||||  |||||||||||||||||||| | || ||| |||||| ||||||    
T  14057720 tacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaa 14057652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14367748 - 14367680
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||  |||||  |||||||||||||||||||| | || ||| |||||| ||||||    
T  14367748 tacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaa 14367680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36239836 - 36239904
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  |||||||||||| |||||||   || ||||| |||||||||||    
T  36239836 tacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaa 36239904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26741934 - 26741993
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    ||||| |||||||||||| |||||  ||||||||||||||||||||  ||| ||||||||    
T  26741934 tacattgatcaaattacgccataatgttctatcataaaccatatttcggtccaactcatt 26741993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 34341443 - 34341502
Alignment:
Q  9 tcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||| |||||  |||||||||||||||||||| | || |||||||| |||||||    
T  34341443 tcaaattacgccataatgttctatcataaaccatatttcaatccaactcattcatctcta 34341502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45601718 - 45601651
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||  ||||   |||||||||||| ||||||||  || ||||||||||||||||    
T  45601718 tacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctcta 45601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30814165 - 30814210
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||    
T  30814165 tacatggatcaaattacgtgataatgttctatcataaaacatattt 30814210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40391866 - 40391931
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||  ||| |||| |||||| |||||    
T  40391866 atggatcaaattacgccataatgttctatcataagccatatttcggtccaacttattaatttctaa 40391931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40979968 - 40980013
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||    
T  40979968 tacatggatcaaattacgccatagtgttctatcataaaccatattt 40980013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27893603 - 27893671
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||| ||||||||| | |||||  |||||||||||| |||||||  ||| | |||||||||||||||    
T  27893603 tacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcattaatctctaa 27893671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37976477 - 37976409
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||| ||||  | |||||  ||||||||||||||||||||   || |||||||||||||||||    
T  37976477 tacatggatctaatttagccataatgttctatcataaaccatatttggatccaactcattaatctctaa 37976409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25715366 - 25715432
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctct 67  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||  ||  |||||||||||||||    
T  25715366 tacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcattaatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43375638 - 43375706
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||| |||||||  ||||||||| ||||||||||  ||| |||||||||||||||||    
T  43375638 tacatggatcaaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaa 43375706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 52900682 - 52900750
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||| || ||||   |||||||||||||||||||| |||| |||||||||||||||||    
T  52900682 tacatggatcaaattccgccatagtgttctatcataaaccatatttcagtccaactcattaatctctaa 52900750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6084217 - 6084150
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||| ||||   |||||||||||||||||||||  || ||||||||||||||||    
T  6084217 tacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28511841 - 28511906
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    ||||| |||||||||||| |||||  |||||||||||||||| |||| ||| ||||||||||||||    
T  28511841 tacattgatcaaattacgccataatgttctatcataaaccatgttttggtccaactcattaatctc 28511906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27072527 - 27072595
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||  ||| ||||| ||||| |||||    
T  27072527 tacatggatcaaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttctaa 27072595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41560471 - 41560403
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||| ||||||||   || |||||||||||||||||    
T  41560471 tacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaatctctaa 41560403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 52532656 - 52532724
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||| ||||||||||| |||||  |||||||||||||||||||||  || ||||||||||| |||||    
T  52532656 tacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaa 52532724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40568450 - 40568509
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||| ||| ||||||||    
T  40568450 tacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactcatt 40568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5275245 - 5275307
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    ||||| ||| ||| || ||||||| || ||||||||||||||||||| |||||||||||||||    
T  5275245 tacattgatgaaactatgtcataatatgctatcataaaccatattttggtctaactcattaat 5275307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 15438859 - 15438901
Alignment:
Q  27 ttctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  15438859 ttctatcataaaccatattttgatctaactcattaatctctaa 15438901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19822130 - 19822085
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||    
T  19822130 tacatggatcaaattacgtcgtaatgttctatcataaaccatattt 19822085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28090734 - 28090779
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||    
T  28090734 tacatggatcaaattacgccataatgttctatcataaaccatattt 28090779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 31274447 - 31274508
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||| |||||  || ||||||||||||||||| | |||||||||| ||||||||    
T  31274447 gatcaaattacgccataacgttatatcataaaccatatttcaatctaactcataaatctcta 31274508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9599434 - 9599502
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  |||||||||||||||||| |   || |||||||||| ||||||    
T  9599434 tacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaa 9599502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19908075 - 19908143
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||| ||||||||  ||||  ||| |||||||||||||||| | || |||||||||||||||||    
T  19908075 tacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctctaa 19908143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19908424 - 19908492
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||| ||||  |||| ||||||| ||||||||||||| | || ||||| |||||||||||    
T  19908424 tacatggatcaaactacgcaataagattctattataaaccatatttgaatccaactcgttaatctctaa 19908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37462916 - 37462983
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  |||||| ||||||||||||| | || |||||||||| ||||||    
T  37462916 tacatggatcaaattacgccataatgttctatgataaaccatatttga-tcaaactcattaacctctaa 37462983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48865747 - 48865815
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| |   ||||| ||||||| ||||||    
T  48865747 tacatggatcaaattacaccataatattctatcataaaccatatctggatctaattcattaacctctaa 48865815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8796451 - 8796384
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    ||||||||| |||||||| |||||  |||||||||||||||||||| | || || |||||||| ||||    
T  8796451 tacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatcta 8796384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 51812741 - 51812690
Alignment:
Q  11 aaattacgtcataaaattctatcataaaccatattttagtctaactcattaa 62  Q
    |||||||| ||||| |||||||||||||||||||||   |||||||||||||    
T  51812741 aaattacggcataatattctatcataaaccatatttcgatctaactcattaa 51812690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50257812 - 50257766
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatatttt 47  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||    
T  50257812 tacatggatcaaattacaccataatgttctatcataaaccatatttt 50257766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52981447 - 52981493
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatatttt 47  Q
    |||| ||||||||||||  ||||| ||||||||||||||||||||||    
T  52981447 tacaaggatcaaattacaccataatattctatcataaaccatatttt 52981493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8676902 - 8676973
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcata---aaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||| | ||||| |||||||||||    |||||||||  ||| |||||||||||||||||    
T  8676902 tacatggatcaaattatgccataatattctatcatagaccaccatatttcggtccaactcattaatctctaa 8676973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12930351 - 12930396
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||| |||||||||||||||||||  |||||||||||| |||||||    
T  12930351 tacacggatcaaattacgtcataatcttctatcataaatcatattt 12930396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19936702 - 19936641
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaa 62  Q
    |||||||||||||||||| | |||  ||||||||| ||||||||||   |||||||||||||    
T  19936702 tacatggatcaaattacgccgtaatgttctatcattaaccatatttggatctaactcattaa 19936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21769751 - 21769796
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||    
T  21769751 tacatggatcaaattacgccataatgttctatcacaaaccatattt 21769796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39318371 - 39318326
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||    
T  39318371 tacatggatcaaattacgccatagtgttctatcataaaccatattt 39318326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 1290072 - 1290116
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||    
T  1290072 acatggatcaaattatgccataatgttctatcataaaccatattt 1290116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9509560 - 9509500
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatta 61  Q
    |||||||||| ||||||| |||||  ||| ||||||||||||||||   ||||||||||||    
T  9509560 tacatggatcgaattacgccataatgttcaatcataaaccatatttggctctaactcatta 9509500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16142020 - 16142088
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||||||||   ||| ||||||||||||| ||   ||||||| ||||| ||||||    
T  16142020 tacatggatcaaattacgtcatattgttcgatcataaaccataattggatctaacttattaaactctaa 16142088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27520247 - 27520315
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||| |||||||||| ||||||  |||||||||||| |||||||   || | |||||||||||||||    
T  27520247 tacatgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaa 27520315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27847840 - 27847908
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||| |||||||| |||||  ||| |||||||||||||||| |  | |||||||||| ||||||    
T  27847840 tacatggataaaattacggcataatgttccatcataaaccatatttcaaccaaactcattaacctctaa 27847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 31979646 - 31979710
Alignment:
Q  5 tggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||| |||| |||||||  || ||||||||||||||||| | || | |||||||||||||||    
T  31979646 tggatcagattatgtcataacgttttatcataaaccatatttgaatccagctcattaatctctaa 31979710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32404566 - 32404634
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| ||| |  || ||||||||||||| |||   | ||||||||||||||||||    
T  32404566 tacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaa 32404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35672927 - 35672859
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||| |||||||||||  ||||| |||||||||||||| ||||||   || ||||||| |||||||||    
T  35672927 tacatcgatcaaattacaccataacattctatcataaactatatttgtatcaaactcataaatctctaa 35672859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34545 - 34609
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| | || |||||||||||||    
T  34545 tacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaatct 34609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 9568938 - 9568853
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaatctctaaatctttcttaata 89  Q
    ||||||||||||||| |||||   |||||||||||||||||||   || |||||| ||||||||||  |||||||||||| |||||    
T  9568938 atggatcaaattacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaaatctaaatctttcctaata 9568853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31818773 - 31818708
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||||||||| |||||  ||||||||||||||||| |||  || ||||||||||||||    
T  31818773 tacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcattaatctc 31818708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5897699 - 5897631
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||  || ||| ||||||| |||||    
T  5897699 tacatggatcaaattacgtcataatattctaccatataccatattttgatccaacacattaatatctaa 5897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8364798 - 8364730
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  |||||||||||||||| ||| |||| |||| |||||| |||||    
T  8364798 tacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaa 8364730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5096076 - 5096015
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaa 62  Q
    ||||| |||||||||||| |||||  |||||||||||||||||||||  || ||||||||||    
T  5096076 tacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcattaa 5096015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7513030 - 7513075
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||    
T  7513030 tacatagatcaaattacgtcataatgttctatcataaaccatattt 7513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30031498 - 30031430
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| | || |||||||| | ||||||    
T  30031498 tacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgacctctaa 30031430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12890817 - 12890758
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcatt 60  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||   |||||||||||    
T  12890817 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcatt 12890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 14389202 - 14389269
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||||||||||| | |||  || |||||||||||||||||   ||||||| ||||||||||||    
T  14389202 acatggatcaaattacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaa 14389269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 608403 - 608358
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||| ||||||||  ||||||||| |||||||||||    
T  608403 tacatggatcaaatgacgtcatagtattctatcaaaaaccatattt 608358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1911622 - 1911577
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| |||||  |||||||||| |||||||||    
T  1911622 tacatggatcaaattacgccataatgttctatcatacaccatattt 1911577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 30700437 - 30700473
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccata 43  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  30700437 gatcaaattacgtcataatattctatcataaatcata 30700473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 32516791 - 32516729
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| ||||||||||||||||||||| | || ||||  |||||||||||    
T  32516791 gatcaaattacgtcataatattctatcataaaccatatttgaatccaacttgttaatctctaa 32516729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 418074 - 418142
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||||||||||| ||||   || |||||||||||||||||    
T  418074 tacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaa 418142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6889235 - 6889167
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||||||| |||||||| |||||  ||||||||||||||||||||| | | |||| ||||||||||||    
T  6889235 tacatggattaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaa 6889167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 20367132 - 20367068
Alignment:
Q  4 atggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||||||  || | |||||||||||||||   || ||||||||||||||||    
T  20367132 atggatcaaattacgtcataatgttatgtcataaaccatatttggatccaactcattaatctcta 20367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9235289 - 9235222
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||   || | ||||||||||||||    
T  9235289 tacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctcta 9235222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14668013 - 14667946
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctcta 68  Q
    |||||||||||||||||  |||||  ||||||||||||||||| ||   || ||||||||||||||||    
T  14668013 tacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactcattaatctcta 14667946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 42504293 - 42504332
Alignment:
Q  7 gatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  42504293 gatcaaattacgtcataatgttctatcataaaccatattt 42504332  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6788309 - 6788247
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    |||||| |||||||||||  ||||  |||||||||||| ||||||| |||| |||||||||||    
T  6788309 tacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactcattaat 6788247  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 7593782 - 7593725
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcat 59  Q
    ||||||||||||||||||||| |  |||||||||||||  ||||| |||| |||||||    
T  7593782 acatggatcaaattacgtcattatgttctatcataaactttatttcagtccaactcat 7593725  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11675772 - 11675703
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt-tagtctaactcattaatctctaa 69  Q
    ||||||||| ||| |||| |||||  ||||||||||||||||||||  | || |||||||||||||||||    
T  11675772 tacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcattaatctctaa 11675703  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 35615518 - 35615457
Alignment:
Q  8 atcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    ||||| ||| |||||||  ||||||||||||| |||||||  || |||||||||||||||||    
T  35615518 atcaagttaggtcataatgttctatcataaactatatttttatccaactcattaatctctaa 35615457  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29922526 - 29922458
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctctaa 69  Q
    |||||||||||||||||| |||||  ||||||| |||||||  ||| |||| ||||  |||||||||||    
T  29922526 tacatggatcaaattacgccataatgttctatcgtaaaccaggtttcagtccaacttgttaatctctaa 29922458  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39668945 - 39668905
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaacca 41  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  39668945 tacatggatcaaattacgccataatgttctatcataaacca 39668905  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 58266 - 58331
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatctc 66  Q
    |||||||||||||||||| |||||  |||||||||||||||||| || ||| |||||||| |||||    
T  58266 tacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactcattgatctc 58331  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48156 - 48201
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  48156 tacatggatcaaattacgccataatattctatcatacaccatattt 48201  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 160372 - 160426
Alignment:
Q  9 tcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaat 63  Q
    |||||||||| |||||  ||||||||||||||||||||  ||| |||||||||||    
T  160372 tcaaattacgccataatgttctatcataaaccatatttcggtcgaactcattaat 160426  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3868 - 3932
Alignment:
Q  1 tacatggatcaaattacgtcataaaattctatcataaaccatattttagtctaactcattaatct 65  Q
    ||||| |||||||||| | | |||  ||| |||||||||||||||||| || |||||||||||||    
T  3868 tacattgatcaaattaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 3932  T

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Target: scaffold0245 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 16477 - 16521
Alignment:
Q  2 acatggatcaaattacgtcataaaattctatcataaaccatattt 46  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||    
T  16477 acatggatcaaattatgccataatgttctatcataaaccatattt 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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