View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11995_high_3 (Length: 278)
Name: NF11995_high_3
Description: NF11995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11995_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 9 - 263
Target Start/End: Original strand, 50766361 - 50766615
Alignment:
| Q |
9 |
agcataggtatcttcattaggaatgcatctagcctcatgaagctgcagatatgtggattctgcctccttgtatagaaacttttgtccaaaagcatcaatg |
108 |
Q |
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| T |
50766361 |
agcataggtatcttcattaggaatgcatctagcctcatgaagctgcagatatgtggattctgcctccttgtatagaaacttttgtccaaaagcatcaatg |
50766460 |
T |
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| Q |
109 |
agtaaattatagcagattacatctggcttgaaggagctccgtagcaatatccatttacatatctgaacaaatttaaatttgttagaaattgatcagagtt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50766461 |
agtaaattatagcagattacatctggcttgaaggagctccgtagcaatatccatttacatatctgaacaaatttaaatttgttagaaattgatcagagtt |
50766560 |
T |
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| Q |
209 |
cgggcaattgtgtttaaatactaccatccaatttacacatgacacgattatcagc |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50766561 |
cgggcaattgtgtttaaatactaccatccaatttacacatgacacgattatcagc |
50766615 |
T |
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