View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11996_high_4 (Length: 219)
Name: NF11996_high_4
Description: NF11996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11996_high_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 38980999 - 38981217
Alignment:
| Q |
1 |
ctttgtctttggatcctgtttacttgctgtgacagaagaaaaagtgttataaaatgtgagatatcacttgtctgcttttaaagatatagcagacagtgct |
100 |
Q |
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| T |
38980999 |
ctttgtctttggatcctgtttacttgctgtgacagaagaaaaagtgttataaaatgtgagatatcacttatctgcttttaaagatatagcagacagtgct |
38981098 |
T |
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| Q |
101 |
gtgtttgtactggtagtagactcatagtggcctgaaaaagttgaagcttgtgaatatacatggagtacatcatccgtgtgattctcagcaaaccactcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38981099 |
gtgtttgtactggtagtagactcatagtggcctgaaaaagttgaagcttgtgaatatacatggagtacatcatccgtgtgattctcagcaaaccactcac |
38981198 |
T |
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| Q |
201 |
aacaataacagccatgaca |
219 |
Q |
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||||||||||||||||||| |
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| T |
38981199 |
aacaataacagccatgaca |
38981217 |
T |
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