View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1199_high_124 (Length: 312)

Name: NF1199_high_124
Description: NF1199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1199_high_124
NF1199_high_124
[»] chr6 (36 HSPs)
chr6 (1-127)||(10413487-10413613)
chr6 (205-291)||(26385419-26385506)
chr6 (127-240)||(32017769-32017882)
chr6 (128-240)||(9481182-9481295)
chr6 (127-183)||(24731934-24731989)
chr6 (205-297)||(30618112-30618204)
chr6 (127-240)||(18500314-18500427)
chr6 (205-279)||(3230016-3230091)
chr6 (127-181)||(18500655-18500708)
chr6 (142-183)||(10321746-10321787)
chr6 (131-183)||(26385598-26385649)
chr6 (231-297)||(24732115-24732181)
chr6 (231-297)||(33714622-33714688)
chr6 (128-181)||(26385278-26385330)
chr6 (127-179)||(2299641-2299692)
chr6 (205-272)||(17142798-17142866)
chr6 (127-240)||(30617966-30618075)
chr6 (237-297)||(32017671-32017731)
chr6 (142-240)||(9854152-9854250)
chr6 (127-170)||(24732274-24732316)
chr6 (142-177)||(33714496-33714531)
chr6 (141-183)||(2299352-2299394)
chr6 (221-297)||(18500449-18500526)
chr6 (142-183)||(21069527-21069568)
chr6 (231-291)||(2299451-2299511)
chr6 (129-181)||(19284130-19284181)
chr6 (141-181)||(34113591-34113631)
chr6 (236-297)||(33637709-33637771)
chr6 (195-240)||(19284197-19284242)
chr6 (195-240)||(24732203-24732248)
chr6 (195-240)||(26385346-26385391)
chr6 (142-179)||(30458913-30458950)
chr6 (195-240)||(33714555-33714600)
chr6 (141-185)||(15942459-15942503)
chr6 (236-272)||(18500392-18500428)
chr6 (236-272)||(32017768-32017804)
[»] chr4 (77 HSPs)
chr4 (1-127)||(50545651-50545777)
chr4 (127-297)||(48259822-48259994)
chr4 (205-297)||(37012842-37012935)
chr4 (127-183)||(31218305-31218360)
chr4 (231-297)||(7819191-7819257)
chr4 (205-297)||(9396849-9396942)
chr4 (205-297)||(18667439-18667532)
chr4 (205-297)||(38574103-38574196)
chr4 (131-240)||(38574233-38574343)
chr4 (127-183)||(46046748-46046802)
chr4 (205-284)||(9619129-9619209)
chr4 (127-183)||(9619303-9619358)
chr4 (127-183)||(41946964-41947019)
chr4 (127-183)||(46046429-46046484)
chr4 (131-240)||(3018014-3018125)
chr4 (231-297)||(46046559-46046625)
chr4 (127-238)||(37012974-37013085)
chr4 (127-183)||(9397022-9397077)
chr4 (129-181)||(9516611-9516662)
chr4 (142-240)||(15640729-15640828)
chr4 (128-240)||(26252502-26252615)
chr4 (126-240)||(38573967-38574081)
chr4 (127-240)||(3273620-3273735)
chr4 (231-282)||(9516760-9516811)
chr4 (231-297)||(3018189-3018255)
chr4 (231-297)||(4356058-4356124)
chr4 (142-240)||(9618993-9619093)
chr4 (222-292)||(31090201-31090271)
chr4 (142-238)||(31943962-31944061)
chr4 (231-297)||(31944127-31944193)
chr4 (231-297)||(34064117-34064183)
chr4 (129-183)||(35376164-35376217)
chr4 (128-185)||(3273941-3273996)
chr4 (205-297)||(18713110-18713203)
chr4 (128-181)||(41947180-41947232)
chr4 (128-180)||(9516937-9516988)
chr4 (127-183)||(31090385-31090440)
chr4 (133-177)||(48580196-48580239)
chr4 (127-181)||(13132265-13132318)
chr4 (127-177)||(18667620-18667669)
chr4 (236-297)||(26252418-26252480)
chr4 (128-240)||(31090060-31090174)
chr4 (129-183)||(34063983-34064036)
chr4 (243-297)||(48580001-48580055)
chr4 (142-183)||(3018334-3018375)
chr4 (127-180)||(7819347-7819399)
chr4 (131-180)||(9396702-9396750)
chr4 (127-180)||(31944277-31944329)
chr4 (142-183)||(35376451-35376492)
chr4 (127-183)||(12904746-12904801)
chr4 (205-292)||(15640865-15640953)
chr4 (129-177)||(15641046-15641093)
chr4 (127-183)||(36887679-36887734)
chr4 (142-185)||(12520650-12520693)
chr4 (142-176)||(31083428-31083462)
chr4 (131-180)||(7819018-7819066)
chr4 (195-240)||(9516678-9516723)
chr4 (236-273)||(13132204-13132241)
chr4 (195-240)||(13132206-13132251)
chr4 (195-240)||(18713028-18713073)
chr4 (142-183)||(20069622-20069663)
chr4 (195-240)||(37012775-37012820)
chr4 (142-183)||(43313535-43313576)
chr4 (195-240)||(48580131-48580176)
chr4 (142-183)||(51029097-51029138)
chr4 (236-272)||(3018090-3018126)
chr4 (236-272)||(3273700-3273736)
chr4 (133-177)||(4356210-4356253)
chr4 (195-239)||(9619245-9619289)
chr4 (131-183)||(13131943-13131994)
chr4 (196-240)||(26252337-26252381)
chr4 (236-272)||(31090139-31090175)
chr4 (236-276)||(37012785-37012825)
chr4 (236-272)||(38574046-38574082)
chr4 (236-272)||(38574232-38574268)
chr4 (147-183)||(43312227-43312263)
chr4 (151-183)||(53896468-53896500)
[»] chr1 (63 HSPs)
chr1 (127-240)||(18462285-18462398)
chr1 (205-292)||(17606458-17606546)
chr1 (127-240)||(17606573-17606685)
chr1 (127-240)||(39711337-39711451)
chr1 (127-183)||(33629014-33629069)
chr1 (128-183)||(18342341-18342395)
chr1 (127-182)||(33628689-33628743)
chr1 (207-297)||(42510149-42510240)
chr1 (231-297)||(39826185-39826251)
chr1 (127-240)||(4906961-4907075)
chr1 (127-180)||(29696564-29696616)
chr1 (231-292)||(33628830-33628891)
chr1 (231-292)||(39711249-39711310)
chr1 (205-297)||(48072111-48072204)
chr1 (131-183)||(17606307-17606358)
chr1 (127-183)||(20995697-20995752)
chr1 (205-285)||(29696714-29696794)
chr1 (127-240)||(24467628-24467741)
chr1 (127-240)||(34749137-34749250)
chr1 (128-183)||(39826370-39826424)
chr1 (128-240)||(39711074-39711185)
chr1 (231-297)||(52058146-52058212)
chr1 (127-238)||(30299231-30299342)
chr1 (127-179)||(52058336-52058387)
chr1 (128-183)||(8292804-8292858)
chr1 (127-240)||(8293072-8293187)
chr1 (242-277)||(16294206-16294241)
chr1 (141-180)||(17500781-17500820)
chr1 (142-185)||(17502051-17502094)
chr1 (242-297)||(30299419-30299474)
chr1 (237-292)||(34749277-34749332)
chr1 (142-185)||(37236731-37236774)
chr1 (242-297)||(39970781-39970836)
chr1 (128-183)||(39970970-39971024)
chr1 (142-181)||(42510341-42510380)
chr1 (128-179)||(52058011-52058061)
chr1 (142-240)||(4907227-4907327)
chr1 (127-181)||(27039637-27039690)
chr1 (127-240)||(30252163-30252279)
chr1 (148-240)||(42510034-42510127)
chr1 (231-297)||(43539524-43539590)
chr1 (127-181)||(48072287-48072340)
chr1 (205-297)||(13229882-13229974)
chr1 (205-297)||(20995819-20995911)
chr1 (127-180)||(29696884-29696936)
chr1 (128-181)||(34749431-34749483)
chr1 (142-179)||(43539675-43539712)
chr1 (128-180)||(13230059-13230110)
chr1 (127-179)||(18462612-18462663)
chr1 (210-297)||(24467783-24467870)
chr1 (127-183)||(39826049-39826104)
chr1 (127-240)||(20995933-20996046)
chr1 (128-240)||(24467892-24468002)
chr1 (231-297)||(7473927-7473993)
chr1 (242-276)||(20995928-20995962)
chr1 (195-240)||(17606376-17606421)
chr1 (236-272)||(4907040-4907076)
chr1 (236-272)||(8293071-8293107)
chr1 (210-297)||(18462440-18462527)
chr1 (236-272)||(34749215-34749251)
chr1 (236-272)||(39711336-39711372)
chr1 (195-239)||(39826312-39826356)
chr1 (127-183)||(43400752-43400807)
[»] chr8 (53 HSPs)
chr8 (127-240)||(10108369-10108483)
chr8 (128-240)||(14820295-14820407)
chr8 (127-183)||(5554868-5554923)
chr8 (119-183)||(21147927-21147990)
chr8 (128-183)||(43851665-43851719)
chr8 (231-297)||(10108547-10108613)
chr8 (205-290)||(17623029-17623115)
chr8 (127-240)||(10108635-10108749)
chr8 (127-240)||(14820559-14820673)
chr8 (128-181)||(18044153-18044205)
chr8 (231-292)||(22494561-22494622)
chr8 (127-183)||(10171467-10171522)
chr8 (127-181)||(7689849-7689902)
chr8 (231-297)||(43851799-43851865)
chr8 (205-297)||(2583470-2583563)
chr8 (205-297)||(42113119-42113212)
chr8 (127-183)||(21148260-21148315)
chr8 (127-183)||(30789831-30789886)
chr8 (205-283)||(14767656-14767735)
chr8 (142-240)||(5555134-5555234)
chr8 (127-181)||(7689523-7689576)
chr8 (231-297)||(7689700-7689766)
chr8 (127-185)||(20877067-20877124)
chr8 (205-297)||(26136835-26136928)
chr8 (142-183)||(30789521-30789562)
chr8 (205-297)||(30789642-30789735)
chr8 (142-183)||(42112998-42113039)
chr8 (231-284)||(42605930-42605983)
chr8 (127-180)||(42606080-42606132)
chr8 (127-180)||(43481642-43481694)
chr8 (127-183)||(17622889-17622944)
chr8 (127-183)||(26136684-26136739)
chr8 (127-183)||(35367409-35367464)
chr8 (205-283)||(21148086-21148164)
chr8 (127-240)||(26136950-26137063)
chr8 (231-297)||(5555046-5555112)
chr8 (127-185)||(38726686-38726743)
chr8 (236-276)||(5555129-5555169)
chr8 (236-276)||(10108630-10108670)
chr8 (236-276)||(14820554-14820594)
chr8 (127-179)||(42113309-42113360)
chr8 (196-239)||(22494454-22494497)
chr8 (147-185)||(21144827-21144865)
chr8 (195-240)||(21148005-21148050)
chr8 (142-183)||(40486642-40486683)
chr8 (142-183)||(40487738-40487779)
chr8 (127-179)||(1949651-1949702)
chr8 (236-272)||(10108448-10108484)
chr8 (236-272)||(14820372-14820408)
chr8 (131-179)||(17623214-17623261)
chr8 (236-276)||(21148015-21148055)
chr8 (195-239)||(30789773-30789817)
chr8 (196-240)||(42605822-42605866)
[»] chr5 (56 HSPs)
chr5 (205-297)||(7126052-7126145)
chr5 (127-237)||(14143901-14144011)
chr5 (205-297)||(14144051-14144144)
chr5 (127-183)||(14411696-14411751)
chr5 (127-183)||(17762282-17762337)
chr5 (128-240)||(23979166-23979279)
chr5 (127-240)||(24837168-24837282)
chr5 (129-240)||(993751-993860)
chr5 (206-297)||(20709347-20709439)
chr5 (129-181)||(41001678-41001729)
chr5 (206-297)||(24650835-24650926)
chr5 (128-183)||(24837493-24837547)
chr5 (127-181)||(24651025-24651078)
chr5 (205-297)||(993882-993974)
chr5 (127-180)||(7126244-7126296)
chr5 (127-240)||(24074302-24074416)
chr5 (143-239)||(41001370-41001465)
chr5 (205-292)||(4919130-4919218)
chr5 (127-183)||(6817122-6817177)
chr5 (127-183)||(17762606-17762661)
chr5 (128-240)||(31799640-31799753)
chr5 (242-297)||(6817257-6817312)
chr5 (128-183)||(18336780-18336833)
chr5 (133-240)||(27159222-27159327)
chr5 (127-181)||(31799965-31800018)
chr5 (205-292)||(17762432-17762520)
chr5 (231-291)||(24837310-24837370)
chr5 (231-291)||(31799781-31799841)
chr5 (127-240)||(4918988-4919103)
chr5 (128-183)||(18336467-18336521)
chr5 (236-283)||(18336638-18336685)
chr5 (142-181)||(29445131-29445170)
chr5 (234-297)||(41001488-41001551)
chr5 (129-179)||(4919317-4919366)
chr5 (133-183)||(7125923-7125972)
chr5 (195-240)||(7126182-7126227)
chr5 (127-240)||(14144166-14144280)
chr5 (130-237)||(24650704-24650810)
chr5 (127-183)||(30512287-30512342)
chr5 (127-183)||(30552627-30552682)
chr5 (195-238)||(6817388-6817431)
chr5 (242-297)||(24074490-24074545)
chr5 (242-277)||(24074561-24074596)
chr5 (236-297)||(14411847-14411909)
chr5 (128-240)||(994011-994123)
chr5 (142-183)||(22571090-22571131)
chr5 (195-240)||(24074567-24074612)
chr5 (127-180)||(27158990-27159042)
chr5 (142-183)||(29444819-29444860)
chr5 (236-272)||(4919068-4919104)
chr5 (236-272)||(7126181-7126217)
chr5 (236-276)||(14144161-14144201)
chr5 (127-183)||(14411989-14412044)
chr5 (127-183)||(20709535-20709590)
chr5 (236-276)||(27159068-27159108)
chr5 (236-276)||(31799718-31799758)
[»] chr3 (81 HSPs)
chr3 (127-240)||(9266974-9267088)
chr3 (127-240)||(30500042-30500154)
chr3 (127-183)||(14171910-14171965)
chr3 (127-183)||(14262360-14262415)
chr3 (127-240)||(30500306-30500419)
chr3 (125-183)||(27946189-27946246)
chr3 (224-297)||(14262171-14262244)
chr3 (127-180)||(16721990-16722042)
chr3 (127-240)||(16722256-16722370)
chr3 (127-240)||(35995677-35995791)
chr3 (128-240)||(5800605-5800718)
chr3 (205-292)||(14162021-14162109)
chr3 (127-183)||(19112763-19112818)
chr3 (127-183)||(45969914-45969969)
chr3 (206-297)||(47575407-47575499)
chr3 (128-183)||(14162194-14162248)
chr3 (242-297)||(17465503-17465558)
chr3 (128-183)||(19720333-19720387)
chr3 (205-283)||(43572541-43572620)
chr3 (231-297)||(9267110-9267176)
chr3 (231-297)||(49986705-49986771)
chr3 (205-297)||(21633046-21633139)
chr3 (127-180)||(49986526-49986578)
chr3 (233-297)||(4204843-4204907)
chr3 (205-292)||(5800755-5800843)
chr3 (127-183)||(9267298-9267353)
chr3 (127-183)||(11003731-11003786)
chr3 (128-240)||(14161871-14161984)
chr3 (206-297)||(30500176-30500268)
chr3 (127-183)||(35995999-35996054)
chr3 (205-292)||(45970065-45970153)
chr3 (127-183)||(45970240-45970295)
chr3 (142-181)||(14262049-14262088)
chr3 (205-283)||(15328610-15328689)
chr3 (234-297)||(16722171-16722234)
chr3 (128-183)||(19113089-19113143)
chr3 (242-297)||(38283738-38283793)
chr3 (143-240)||(45003761-45003859)
chr3 (231-297)||(14171721-14171787)
chr3 (231-297)||(19112900-19112966)
chr3 (127-177)||(20853694-20853743)
chr3 (133-183)||(27946114-27946163)
chr3 (231-297)||(35995813-35995879)
chr3 (231-297)||(45003673-45003739)
chr3 (127-240)||(21633161-21633275)
chr3 (127-240)||(43572388-43572502)
chr3 (128-240)||(5800870-5800982)
chr3 (127-183)||(24490243-24490298)
chr3 (127-179)||(33372405-33372456)
chr3 (231-283)||(33372583-33372635)
chr3 (142-182)||(35740830-35740870)
chr3 (127-179)||(49986856-49986907)
chr3 (233-297)||(52552827-52552891)
chr3 (127-182)||(3425973-3426027)
chr3 (242-297)||(20853831-20853886)
chr3 (127-240)||(20853961-20854074)
chr3 (127-177)||(14171586-14171635)
chr3 (127-168)||(21632900-21632940)
chr3 (142-183)||(35741908-35741949)
chr3 (142-183)||(36990983-36991024)
chr3 (142-183)||(37016423-37016464)
chr3 (128-185)||(45003496-45003552)
chr3 (127-183)||(3424773-3424828)
chr3 (236-276)||(16722251-16722291)
chr3 (131-179)||(17649337-17649384)
chr3 (236-276)||(30500119-30500159)
chr3 (127-179)||(33372732-33372783)
chr3 (142-181)||(38283563-38283602)
chr3 (129-240)||(52552953-52553065)
chr3 (242-276)||(5800865-5800899)
chr3 (127-177)||(17465697-17465746)
chr3 (205-265)||(11003882-11003943)
chr3 (195-240)||(14262104-14262149)
chr3 (195-240)||(19112833-19112878)
chr3 (195-240)||(20853764-20853809)
chr3 (236-272)||(9267053-9267089)
chr3 (236-272)||(14161949-14161985)
chr3 (236-276)||(14262114-14262154)
chr3 (127-179)||(17465366-17465417)
chr3 (244-276)||(19112851-19112883)
chr3 (127-179)||(43572718-43572769)
[»] chr7 (64 HSPs)
chr7 (128-240)||(20419536-20419649)
chr7 (127-240)||(23704926-23705039)
chr7 (127-239)||(20963760-20963872)
chr7 (205-297)||(20963630-20963723)
chr7 (127-240)||(28218428-28218542)
chr7 (127-240)||(41600223-41600337)
chr7 (206-297)||(23704812-23704904)
chr7 (127-183)||(28218177-28218232)
chr7 (231-297)||(20419671-20419737)
chr7 (205-297)||(31851374-31851467)
chr7 (224-297)||(44816970-44817043)
chr7 (127-183)||(12006540-12006595)
chr7 (128-183)||(20419861-20419915)
chr7 (231-297)||(20458826-20458892)
chr7 (231-297)||(41600093-41600159)
chr7 (128-177)||(23704662-23704710)
chr7 (128-240)||(38879989-38880099)
chr7 (127-183)||(20458691-20458746)
chr7 (129-180)||(44816832-44816884)
chr7 (127-183)||(48672603-48672658)
chr7 (128-183)||(6465855-6465909)
chr7 (128-241)||(16995200-16995313)
chr7 (195-277)||(24194931-24195014)
chr7 (231-297)||(12006675-12006741)
chr7 (128-240)||(23383499-23383613)
chr7 (128-240)||(38879723-38879837)
chr7 (127-240)||(12006805-12006919)
chr7 (127-240)||(23383765-23383879)
chr7 (128-181)||(24195198-24195250)
chr7 (128-181)||(41599958-41600010)
chr7 (127-180)||(48672276-48672328)
chr7 (127-183)||(10409697-10409752)
chr7 (127-183)||(14646974-14647029)
chr7 (127-175)||(20459022-20459069)
chr7 (127-179)||(25772363-25772414)
chr7 (129-180)||(7658292-7658342)
chr7 (242-297)||(25772498-25772553)
chr7 (231-297)||(10409551-10409617)
chr7 (231-297)||(23383635-23383701)
chr7 (127-181)||(33162862-33162915)
chr7 (231-297)||(48672414-48672480)
chr7 (205-277)||(6466004-6466077)
chr7 (127-180)||(31852157-31852209)
chr7 (224-297)||(33162705-33162778)
chr7 (205-297)||(38879859-38879952)
chr7 (236-297)||(48648396-48648457)
chr7 (131-183)||(7657972-7658023)
chr7 (127-183)||(25772655-25772710)
chr7 (205-272)||(28218323-28218391)
chr7 (142-180)||(1250533-1250571)
chr7 (196-238)||(31851506-31851548)
chr7 (205-265)||(1250373-1250434)
chr7 (195-240)||(1250471-1250516)
chr7 (127-180)||(6466132-6466184)
chr7 (142-183)||(20963507-20963548)
chr7 (195-240)||(20963563-20963608)
chr7 (142-183)||(23258248-23258289)
chr7 (195-240)||(24195061-24195106)
chr7 (195-240)||(28218247-28218292)
chr7 (127-183)||(14630335-14630390)
chr7 (236-272)||(23704925-23704961)
chr7 (147-183)||(33131651-33131687)
chr7 (236-272)||(38879802-38879838)
chr7 (129-181)||(48648263-48648314)
[»] chr2 (67 HSPs)
chr2 (205-297)||(22263326-22263419)
chr2 (128-240)||(23806217-23806330)
chr2 (127-240)||(19251470-19251583)
chr2 (127-240)||(17463356-17463470)
chr2 (128-185)||(17850587-17850643)
chr2 (205-297)||(23854801-23854894)
chr2 (236-297)||(26236277-26236338)
chr2 (205-292)||(23806102-23806190)
chr2 (126-240)||(26236360-26236474)
chr2 (142-240)||(26560569-26560667)
chr2 (231-297)||(15106244-15106310)
chr2 (231-297)||(19251647-19251713)
chr2 (128-240)||(15106332-15106443)
chr2 (127-180)||(17850913-17850965)
chr2 (127-180)||(22263520-22263572)
chr2 (205-297)||(26560689-26560782)
chr2 (127-183)||(19251793-19251848)
chr2 (128-236)||(23854688-23854797)
chr2 (128-176)||(23855025-23855072)
chr2 (142-185)||(12419044-12419087)
chr2 (142-185)||(12431104-12431147)
chr2 (125-183)||(39878100-39878156)
chr2 (205-283)||(39878252-39878331)
chr2 (128-183)||(42670717-42670771)
chr2 (231-290)||(42670861-42670920)
chr2 (142-180)||(13254763-13254801)
chr2 (231-297)||(26135994-26136060)
chr2 (142-183)||(26135830-26135871)
chr2 (129-182)||(26560880-26560932)
chr2 (127-183)||(20498746-20498801)
chr2 (142-240)||(22263205-22263304)
chr2 (127-183)||(26236126-26236181)
chr2 (142-181)||(30959997-30960036)
chr2 (128-183)||(42671043-42671097)
chr2 (231-297)||(13284543-13284609)
chr2 (142-180)||(17463105-17463143)
chr2 (231-297)||(20498922-20498988)
chr2 (127-185)||(23046706-23046763)
chr2 (141-183)||(33290061-33290103)
chr2 (142-183)||(13284737-13284778)
chr2 (205-297)||(17463241-17463334)
chr2 (127-176)||(23047913-23047961)
chr2 (128-181)||(26136143-26136195)
chr2 (236-297)||(30390594-30390655)
chr2 (142-183)||(30958697-30958738)
chr2 (127-176)||(44097737-44097786)
chr2 (236-276)||(22263269-22263309)
chr2 (196-240)||(30390528-30390572)
chr2 (127-178)||(13284411-13284461)
chr2 (128-183)||(15106067-15106121)
chr2 (242-277)||(33290133-33290168)
chr2 (142-240)||(33290314-33290412)
chr2 (128-183)||(34548574-34548628)
chr2 (128-183)||(39878397-39878450)
chr2 (198-240)||(22263456-22263498)
chr2 (231-277)||(33290226-33290272)
chr2 (242-276)||(42670803-42670837)
chr2 (195-240)||(17850851-17850896)
chr2 (142-183)||(30390472-30390513)
chr2 (127-183)||(13254496-13254551)
chr2 (236-272)||(19251548-19251584)
chr2 (236-272)||(22263455-22263491)
chr2 (236-272)||(23806216-23806252)
chr2 (236-276)||(26560632-26560672)
chr2 (236-272)||(30390537-30390573)
chr2 (196-240)||(42670788-42670832)
chr2 (128-176)||(44098953-44099000)
[»] scaffold0117 (1 HSPs)
scaffold0117 (133-239)||(12248-12355)
[»] scaffold0449 (2 HSPs)
scaffold0449 (127-183)||(7524-7579)
scaffold0449 (129-240)||(7227-7339)
[»] scaffold0185 (2 HSPs)
scaffold0185 (127-183)||(3868-3923)
scaffold0185 (231-289)||(4012-4070)
[»] scaffold0809 (3 HSPs)
scaffold0809 (126-185)||(1728-1786)
scaffold0809 (231-297)||(1587-1653)
scaffold0809 (127-183)||(1410-1465)
[»] scaffold0361 (3 HSPs)
scaffold0361 (127-240)||(4828-4941)
scaffold0361 (231-297)||(4740-4806)
scaffold0361 (127-183)||(4561-4616)
[»] scaffold0141 (2 HSPs)
scaffold0141 (127-182)||(8324-8378)
scaffold0141 (128-183)||(8646-8700)
[»] scaffold0477 (4 HSPs)
scaffold0477 (127-181)||(4879-4932)
scaffold0477 (242-297)||(4935-4991)
scaffold0477 (142-181)||(5073-5112)
scaffold0477 (195-240)||(5013-5058)
[»] scaffold0352 (3 HSPs)
scaffold0352 (127-185)||(4666-4723)
scaffold0352 (127-183)||(6003-6058)
scaffold0352 (236-273)||(4745-4782)
[»] scaffold0881 (3 HSPs)
scaffold0881 (231-292)||(360-421)
scaffold0881 (127-179)||(218-269)
scaffold0881 (127-183)||(541-596)
[»] scaffold0176 (1 HSPs)
scaffold0176 (127-180)||(15955-16007)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-185)||(224-267)


Alignment Details
Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10413487 - 10413613
Alignment:
Q  1 gagagaactaaaagagatattcagggtatctcatcgatccgtttggtttctaacttgggccattacttaggttttcatttagtttaagagagagttacaa 100  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||    
T  10413487 gagaggactaaaagagatatccagggtatctcgtcgatccgtttggtttctaacttgggccattacttaggttttcctttagttcaagggagagtcacaa 10413586  T
Q  101 aggaaacatacaaggatattattgaga 127  Q
    | |||||||||||| ||||||||||||    
T  10413587 atgaaacatacaagcatattattgaga 10413613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 26385506 - 26385419
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 291  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  26385506 gtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtat 26385419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 32017882 - 32017769
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  32017882 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 32017784  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  32017783 tccacttttggtccc 32017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 9481182 - 9481295
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  9481182 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  9481281 tccaattttggtccc 9481295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 24731934 - 24731989
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24731934 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 24731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 30618112 - 30618204
Alignment:
Q  205 gtccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || ||||| ||| ||||| || | ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  30618112 gtccctgtaatttcagattctcccacttttgatcactgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgtagat 30618204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 18500314 - 18500427
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  18500314 agggtaaatacctctttt-cgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattct 18500412  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  18500413 tccacttttggtccc 18500427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 3230091 - 3230016
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttatttta 279  Q
    |||||||||||| ||||||| ||| | |||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  3230091 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcctccacttttggtccctcatttta 3230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18500708 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 10321746 - 10321787
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10321746 ttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 26385649 - 26385598
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  26385649 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 26385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 24732115 - 24732181
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  24732115 ttttggtccctataatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagat 24732181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 33714688 - 33714622
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  33714688 ttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagat 33714622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 26385278 - 26385330
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  26385278 gggtaaatacctctttt-cgtctctgtaatattagcgaattctggttttagtcc 26385330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 2299692 - 2299641
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  2299692 agggtaaatatctctttt-cgttcctgtaatattagcgaattccggttttagt 2299641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 17142866 - 17142798
Alignment:
Q  205 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtccct 272  Q
    |||||||||||| || |||| || || |||||||||| ||||||||| |||||||||||||||||||||    
T  17142866 gtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 30617966 - 30618075
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||   |         ||||||||| |||||||||||| |||||| ||    
T  30617966 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtcc---tttaaaaaaatttagattttgtccctgtaatttcatattgtt 30618061  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  30618062 ccacttttggtccc 30618075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 32017731 - 32017671
Alignment:
Q  237 tcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagat 32017671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 9854250 - 9854152
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||| ||||||||||||||||||||||| ||||||||||  ||          ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9854250 tttttgtccctgtaatattagcgaattctggttttagtctgtaaaaataataatttagattttgtccttgtaatttcatattcttccacttttggtccc 9854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 24732316 - 24732274
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattcc 170  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24732316 agggtaaatacctctttt-cgtccctgtaatattagcgaattcc 24732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 33714496 - 33714531
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggtttta 177  Q
    ||||||||||||||||||||||||||||||||||||    
T  33714496 ttttcgtccctgtaatattagcgaattccggtttta 33714531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 2299352 - 2299394
Alignment:
Q  141 tttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  2299352 tttttcgtctatgtaatattagcgaattccggttttagtccct 2299394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 18500526 - 18500449
Alignment:
Q  221 attcttccatttttggtcccagtaatttc-atattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||| |||| |||||||||| |||||||  | ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  18500526 attcctccacttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgtatgcagat 18500449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 21069527 - 21069568
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccct 21069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 2299511 - 2299451
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 291  Q
    |||||||||  ||||||| | ||||| ||||||||||||||| ||||||||||| ||||||    
T  2299511 ttttggtccttgtaattttagattccgccacttttggtccctcattttacgtgccatgtat 2299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 19284130 - 19284181
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||| ||| | ||||||||||||||||||| ||||||||||    
T  19284130 ggtaaatacctctttt-cgttcatgtaatattagcgaattccagttttagtcc 19284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 34113631 - 34113591
Alignment:
Q  141 tttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  34113631 tttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 33637709 - 33637771
Alignment:
Q  236 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||  ||||||| ||||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgttatgtatgcagat 33637771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 19284197 - 19284242
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  19284197 tttagattttgtccctgtaatttcagattcttccacttttggtccc 19284242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 24732248 - 24732203
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24732248 tttagattttgtccatgtaatttcatattcttccacttttggtccc 24732203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 26385346 - 26385391
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  26385346 tttagattttgtccctgtaattttatattcttccacttttggtccc 26385391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 30458913 - 30458950
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30458913 ttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 33714555 - 33714600
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  33714555 tttagattttgtccttgtaatttcatattcttccacttttggtccc 33714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 15942503 - 15942459
Alignment:
Q  141 tttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  15942503 tttttggtccctgcaatatgagcgaattccgattttagtccctat 15942459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 18500392 - 18500428
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  18500392 gtccctgtaatttcatattcttccacttttggtccct 18500428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 32017804 - 32017768
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  32017804 gtccctgtaatttcatattcttccacttttggtccct 32017768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 50545777 - 50545651
Alignment:
Q  1 gagagaactaaaagagatattcagggtatctcatcgatccgtttggtttctaacttgggccattacttaggttttcatttagtttaagagagagttacaa 100  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||    
T  50545777 gagaggactaaaagagatatccagggtatctcgtcgatccgtttggtttctaacttgggccattacttaggttttcctttagttcaagggagagtcacaa 50545678  T
Q  101 aggaaacatacaaggatattattgaga 127  Q
    | |||||||||||| ||||||||||||    
T  50545677 atgaaacatacaagcatattattgaga 50545651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 297
Target Start/End: Original strand, 48259822 - 48259994
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn--tttagatttagtccctgtaattccatattc 224  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| |           ||||||||| |||| ||||||| || ||||    
T  48259822 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattc 48259920  T
Q  225 ttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
     ||| | |||||||||| || |||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  48259921 ctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 48259994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 37012935 - 37012842
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| ||||||||||| | |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  37012935 gtccctgtaatttcatattcttcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 37012842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 31218360 - 31218305
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31218360 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 31218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 7819191 - 7819257
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  7819191 ttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagat 7819257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 9396849 - 9396942
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  9396849 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccacttttggtccctcattttacgtgtcatgtatgcagat 9396942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 18667439 - 18667532
Alignment:
Q  205 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||||  |||||||||| ||||||| | ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  18667439 gtccctgtaatttcagattcctccaacttttggtccctgtaattttaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 18667532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 38574196 - 38574103
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||| | ||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  38574196 gtccctgtaatttcagattcctcccacttttggtctctgtaatttcatattcctccacttttggtccctcattttacatgccatgtatgcagat 38574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 38574343 - 38574233
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 228  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| |||||||||||    
T  38574343 taaatacct-tttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcc 38574245  T
Q  229 atttttggtccc 240  Q
    | ||||||||||    
T  38574244 acttttggtccc 38574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 46046802 - 46046748
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  46046802 agggtaaatacct--ttttcgtccctgtaatattagcgaattccggttttagtccct 46046748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 9619129 - 9619209
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgc 284  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||    
T  9619129 gtccctgtaatttcatattcctcccatttttggtccctgtaatttcagattcctccacttttgctccctctttttacgtgc 9619209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 9619358 - 9619303
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9619358 agggtaaatacctcttttt-gtccctgtaatattagcgaattctggttttagtccct 9619303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 41946964 - 41947019
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41946964 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 41947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 46046429 - 46046484
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  46046429 agggtaaatacct-tttttcgtccctgtaatattagcgaattccgattttagtccct 46046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 3018014 - 3018125
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattcttc 227  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |            ||||||||| |||||||||||| ||||||||||    
T  3018014 taaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 3018112  T
Q  228 catttttggtccc 240  Q
    || ||||||||||    
T  3018113 cacttttggtccc 3018125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 46046625 - 46046559
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  46046625 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 46046559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 37013085 - 37012974
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |           |||||||| |||||||||||| ||||||||    
T  37013085 agggtaaatacctcattt-cgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattct 37012987  T
Q  226 tccatttttggtc 238  Q
    |||| ||||||||    
T  37012986 tccacttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 9397077 - 9397022
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  9397077 agggtaaatacttctttt-cgtccctgtaatattagcaaattccggttttagtccct 9397022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 9516611 - 9516662
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  9516611 ggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 15640729 - 15640828
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| ||||||||| || ||||||||||    
T  15640729 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttggtccc 15640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 26252615 - 26252502
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||  ||          ||||||||| |||||||||||| ||||||||    
T  26252615 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 26252517  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  26252516 tccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 38573967 - 38574081
Alignment:
Q  126 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| |          ||||||||| |||||||||||| |||||||    
T  38573967 gagggtaaatacctctttt-cgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattc 38574065  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  38574066 ttccacttttggtccc 38574081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 3273620 - 3273735
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnnttt---agatttagtccctgtaattccatatt 223  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||  |         |||   |||||| |||||||||||| ||||||    
T  3273620 agggtaaatatctctttt-cgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatatt 3273718  T
Q  224 cttccatttttggtccc 240  Q
    |||||| ||||||||||    
T  3273719 cttccacttttggtccc 3273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 9516811 - 9516760
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgt 282  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  9516811 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgt 9516760  T

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Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 3018189 - 3018255
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  3018189 ttttggtccctataatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagat 3018255  T

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Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 4356058 - 4356124
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  4356058 ttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagat 4356124  T

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Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 9618993 - 9619093
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  9618993 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 9619092  T
Q  240 c 240  Q
    |    
T  9619093 c 9619093  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 31090271 - 31090201
Alignment:
Q  222 ttcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||| ||| |||||||||| ||||||||| ||||||||||||||||||| | ||||||||| | |||||||    
T  31090271 ttctcccacttttggtccccgtaatttcagattcctccacttttggtccttcattttacgtaccatgtatg 31090201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 31943962 - 31944061
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtc 238  Q
    |||||||||||||||||||||||||||||||||||||| |||   |          ||||||||| |||||||||||| |||||||||||| ||||||||    
T  31943962 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 31944127 - 31944193
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  31944127 ttttggtccatgtaatttcagattcctccacttttggtccctcattttacgtgccaagtatgcagat 31944193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 34064183 - 34064117
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||||| ||| ||||||| ||||    
T  34064183 ttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgtatgtagat 34064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 35376164 - 35376217
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  35376164 ggtaaatacctatttt-cgtccctgtaatattagcgaattctggttttagtccct 35376217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 3273996 - 3273941
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  3273996 gggtaaatacctctttt-cgtccc-gtaatattagcgaatttcggttttagtccctat 3273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 18713110 - 18713203
Alignment:
Q  205 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||  ||||||||| ||||||| ||||||||||||| | ||||||| ||||||||| ||||    
T  18713110 gtccctgtaatttcagattcctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgttcaatgtatgtagat 18713203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  41947232 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 9516988 - 9516937
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  9516988 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtc 9516937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 31090440 - 31090385
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||    
T  31090440 agggtaaatatctctttt-cgtccctgtaatattagcgaatttcgattttagtccct 31090385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 48580239 - 48580196
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  48580239 aatacctctttt-cgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 13132318 - 13132265
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||    
T  13132318 agggtaaatacctatttt-cgtccctgtaatattagcgaatttcgattttagtcc 13132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 18667669 - 18667620
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  18667669 agggttaatacctctttt-cgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 26252418 - 26252480
Alignment:
Q  236 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| ||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgtatgcagat 26252480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 31090060 - 31090174
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattc 224  Q
    |||||||||| ||||||| |||||||||||||||| ||||| || ||||||||||| |            ||||||||| |||||||||||| |||||||    
T  31090060 gggtaaatacttcttttt-gtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 31090158  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  31090159 ttccacttttggtccc 31090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 34063983 - 34064036
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||| |||||||||||||||| |||||||  ||||||||||||    
T  34063983 ggtaaatacctctttt-cgtccctgtaatattaacgaattctagttttagtccct 34064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 48580055 - 48580001
Alignment:
Q  243 taatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  48580055 taatttcaaattcctccacttttgctccctcattttacgtgccatgtatgtagat 48580001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 3018375 - 3018334
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  3018375 ttttcgtccctgtaatattaacgaatttcggttttagtccct 3018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||| || ||||||||||| |||||||||||||||| |||||||||||    
T  7819399 agggtaaatatct-tttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 9396702 - 9396750
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  9396702 taaatacctctttt-cgtccctgtaatattagcgaatttcgattttagtc 9396750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 31944329 - 31944277
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  31944329 agggtaaatacttctttt-cgtccttgtaatattagcgaatttcggttttagtc 31944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 35376492 - 35376451
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  35376492 ttttcgtccctgtaatattagcaaattccagttttagtccct 35376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 12904746 - 12904801
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||| |||||||||||||||  |||||||||||||    
T  12904746 agggtaaatatctctttt-cgtccctataatattagcgaattttggttttagtccct 12904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 15640865 - 15640953
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| || |||| ||| | ||||| |||  ||||||||| ||||||||||||||||||| | ||||||||||  |||||||    
T  15640865 gtccctgtaatttcagattcctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgtatg 15640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 15641093 - 15641046
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  15641093 ggtaaatacctctttt-cgtccttgtaatattagtgaattccggtttta 15641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 36887679 - 36887734
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| ||||||||||||  ||||||||||||||||||||||  |||||||||||||    
T  36887679 agggttaatacctcttttg-gtccctgtaatattagcgaattttggttttagtccct 36887734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 12520650 - 12520693
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  12520650 ttttagtccctataatattagcgaattccagttttagtccctat 12520693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 31083462 - 31083428
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggtttt 176  Q
    |||||||||||||||||| ||||||||||||||||    
T  31083462 ttttcgtccctgtaatatgagcgaattccggtttt 31083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 7819018 - 7819066
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||| || || | |||||||||||||||||||||||||||    
T  7819018 taaatacctctttt-cgaccatataatattagcgaattccggttttagtc 7819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 9516678 - 9516723
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9516678 tttagattttgtccttgtaatttcatattcttccacttttggtccc 9516723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 13132241 - 13132204
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccctt 273  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13132241 gtccctgtaatttcatattcttccacttttggtccctt 13132204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 13132251 - 13132206
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||  |||||||||||| |||||||||||| ||||||||||    
T  13132251 tttagattctgtccctgtaatttcatattcttccacttttggtccc 13132206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 18713028 - 18713073
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  18713028 tttagattttgtccctgtaatttcatattgttccaattttggtccc 18713073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 20069663 - 20069622
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
T  20069663 ttttcgtccctgtaatatgagcgaattccagttttggtccct 20069622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 37012775 - 37012820
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  37012775 tttagattttgtccctgtaatttcagattcttccacttttggtccc 37012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 43313576 - 43313535
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||| ||||||||||||||||||| |||||||||||||    
T  43313576 ttttggtctctgtaatattagcgaattctggttttagtccct 43313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 48580176 - 48580131
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  48580176 tttagattttgtccctgtaatttcatattgttccacttttggtccc 48580131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 51029138 - 51029097
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  51029138 ttttggtccctgtaatatgagcgaatttcggttttagtccct 51029097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 3018090 - 3018126
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3018090 gtccctgtaatttcatattcttccacttttggtccct 3018126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 3273700 - 3273736
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3273700 gtccctgtaatttcatattcttccacttttggtccct 3273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 4356253 - 4356210
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||    
T  4356253 aatacctctttt-catccctgtaatattagcgaatttcggtttta 4356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9619289 - 9619245
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9619289 tttagattttgtccttgtaatttcatattcttccacttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 13131943 - 13131994
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||| ||||| |||||||||| |||||| | ||||||||||||    
T  13131943 taaatacctctttt-cgtccttgtaatattaacgaatttctgttttagtccct 13131994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 26252337 - 26252381
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccc 26252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 31090139 - 31090175
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  31090139 gtccctgtaatttcatattcttccacttttggtccct 31090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 37012785 - 37012825
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  37012785 gtccctgtaatttcagattcttccacttttggtcccttatt 37012825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 38574046 - 38574082
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38574046 gtccctgtaatttcatattcttccacttttggtccct 38574082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 38574268 - 38574232
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38574268 gtccctgtaatttcatattcttccacttttggtccct 38574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 43312227 - 43312263
Alignment:
Q  147 gtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccct 43312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 53896468 - 53896500
Alignment:
Q  151 ctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| |||||||||||||||||||||||    
T  53896468 ctgtaatatgagcgaattccggttttagtccct 53896500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 18462285 - 18462398
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| || |||||    
T  18462285 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 18462383  T
Q  226 tccatttttggtccc 240  Q
    |||||||||||||||    
T  18462384 tccatttttggtccc 18462398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 17606458 - 17606546
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  17606458 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 17606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 17606685 - 17606573
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |         ||||||||| |||| ||||||| || ||||||    
T  17606685 agggttaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattctt 17606587  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  17606586 ccacttttggtccc 17606573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 39711451 - 39711337
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| |||||||    
T  39711451 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattc 39711353  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  39711352 ttccacttttggtccc 39711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 33629069 - 33629014
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33629069 agggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 33629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 18342395 - 18342341
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18342395 gggtaaatacct-tttttcgtccctgtaatattagcgaatttcggttttagtccct 18342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 33628689 - 33628743
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 182  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  33628689 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 42510240 - 42510149
Alignment:
Q  207 ccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| |||| |||||| ||||||| ||||    
T  42510240 ccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgtatgcagat 42510149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 39826251 - 39826185
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  39826251 ttttgatccctgtaatttcatattcctccacttttgatccctcattttacgtgccatgtatgcagat 39826185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 4906961 - 4907075
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  4906961 agggtaaatacctctttt-cgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattc 4907059  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  4907060 ttccacttttggtccc 4907075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 29696564 - 29696616
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  29696564 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 29696616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 33628891 - 33628830
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| |||||||    
T  33628891 ttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtgccatgtatg 33628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 39711249 - 39711310
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||| ||||||||  ||||||||||||||||||||| ||||||||||| |||||||    
T  39711249 ttttggtccctgtaatttcggattcctccacttttggtccctcattttacgtgccatgtatg 39711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 48072111 - 48072204
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  48072111 gtccctgtaatttcaaattcctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgtatgcagat 48072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17606307 - 17606358
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17606307 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 17606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 20995697 - 20995752
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  20995697 agggtaaatacctctttt-catctctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 29696714 - 29696794
Alignment:
Q  205 gtccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgca 285  Q
    |||||| ||||| ||||||| |||   ||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||    
T  29696714 gtccctataatttcatattcctcccactttggtccctgtattttcagattcctccacttttggtccctcattttacgtgca 29696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 24467628 - 24467741
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||| |          ||||||||| |||||||||||| || |||||    
T  24467628 agggtaaatacatctttt-cgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 24467726  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  24467727 tccacttttggtccc 24467741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 34749137 - 34749250
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||| |||||| | |||||||||||||||||||||| | |||||||||||||          ||||||||| ||||| |||||| ||||||||    
T  34749137 agggtaaatacatctttt-catccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattct 34749235  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  34749236 tccacttttggtccc 34749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 39826424 - 39826370
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  39826424 gggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccct 39826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 39711074 - 39711185
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |          ||||||||| |||| ||||||| |||||||||    
T  39711074 gggtaaatacctctttt-cgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattctt 39711171  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  39711172 ccacttttggtccc 39711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 52058212 - 52058146
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||    
T  52058212 ttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgtatgcagat 52058146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 30299231 - 30299342
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| ||||||||||||||||||||| | || |||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  30299231 agggtaaatacctctttt-cgtccctgtaatattagcgaacttcgattttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 30299329  T
Q  226 tccatttttggtc 238  Q
    |||| ||||||||    
T  30299330 tccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 52058387 - 52058336
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  52058387 agggtaaatacctctttt-cgtccctgtaatattagcgaattttggttttagt 52058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 8292804 - 8292858
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||    
T  8292804 gggtaaataactctttt-cgtccctgtactattagcgaatcccggttttagtccct 8292858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 8293187 - 8293072
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 223  Q
    |||||||||||||||||| ||||||| |||||||| |||||||  |||||||||||| |            ||||||||| |||||||||||| ||||||    
T  8293187 agggtaaatacctctttt-cgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  224 cttccatttttggtccc 240  Q
    |||||| ||||||||||    
T  8293088 cttccacttttggtccc 8293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 16294241 - 16294206
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattt 277  Q
    ||||||||||||||||||||||||||||||||||||    
T  16294241 gtaatttcatattcctccacttttggtcccttattt 16294206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 17500781 - 17500820
Alignment:
Q  141 tttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  17500781 tttttggtccctgtaatattagcgaattccggttttagtc 17500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 17502094 - 17502051
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  17502094 ttttggtccttgtaatattagcgaattccggttttagtccctat 17502051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 30299419 - 30299474
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  30299419 gtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagat 30299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 34749332 - 34749277
Alignment:
Q  237 tcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||| ||| |||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattttacatgccatgtatg 34749277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 37236731 - 37236774
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  37236731 ttttggtccctgtaatatgagcgaattccggttttagtccctat 37236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 39970836 - 39970781
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| |||| |||||||||||||||| ||||||||||| ||||||| ||||    
T  39970836 gtaatttcagattcatccacttttggtccctcattttacgtgccatgtatgcagat 39970781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 39971024 - 39970970
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||    
T  39971024 gggtaaatacctctttt-cgtccatgtaatattaacgaatttcggttttagtccct 39970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 42510380 - 42510341
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  42510380 ttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 52058011 - 52058061
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  52058011 gggtaaatacctctttt-cgtccttgtaatattaacgaattccggttttagt 52058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 4907327 - 4907227
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||| ||||||||||||||||||||||| |||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  4907327 ttttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 4907228  T
Q  240 c 240  Q
    |    
T  4907227 c 4907227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 27039637 - 27039690
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  27039637 agggttaatacctctttt-cgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 30252279 - 30252163
Alignment:
Q  127 agggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatatt 223  Q
    |||||||||||||||||  | |||||| |||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| ||||||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  224 cttccatttttggtccc 240  Q
    |||||||||||| ||||    
T  30252179 cttccatttttgatccc 30252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 42510034 - 42510127
Alignment:
Q  148 tccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||||||||||||||||||||||||| ||||| |          ||||||||| |||||||||||| |||||||||||| |||| |||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttccacttttagtccc 42510127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 43539524 - 43539590
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| |||| ||||||||| ||||||||||||||||| ||| ||||||||||  ||||||| ||||    
T  43539524 ttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgtatgcagat 43539590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 48072340 - 48072287
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  48072340 agggtaaatacctctttt-cgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 13229882 - 13229974
Alignment:
Q  205 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| || || |||||||||  ||||||||| ||||||||||||||||||||| ||||| ||||  ||||||| ||||    
T  13229882 gtccctgtaatttcagattcctctcacttttggtcct-gtaatttcagattcctccacttttggtccctcattttgcgtgtcatgtatgcagat 13229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 20995819 - 20995911
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||| ||||| ||||||||| ||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20995819 gtccctgtaatttcagattcctcccacttttcgtccctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgtatgcagat 20995911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 29696936 - 29696884
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  29696936 agggtaaatacctctttt-cgtttatgtaatattagcgaattccggttttagtc 29696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 34749483 - 34749431
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  34749483 gggtaaatacctcttttt-gtctctgtaatattatcgaattccgattttagtcc 34749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 43539712 - 43539675
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||||||| |||||||||||||||    
T  43539712 ttttcgtccctgtaatattagcaaattccggttttagt 43539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 13230110 - 13230059
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||||||||||||||| |||| ||| |||||||||||||| |||||||||||    
T  13230110 gggtaaatacctctttt-cgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18462663 - 18462612
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||| ||||||||||||| | |||||||||||||||| |||||||||||||||    
T  18462663 agggcaaatacctcttttcc-tccctgtaatattagcaaattccggttttagt 18462612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 24467783 - 24467870
Alignment:
Q  210 tgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||| ||||||| ||| | |||||||||| ||||||||| ||| |||||| |||||||| | ||||||||||| ||||||| ||||    
T  24467783 tgtaatttcatattcctcccacttttggtccctgtaatttcagattactccacatttggtcc-tcattttacgtgccatgtatgcagat 24467870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 39826049 - 39826104
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| | ||||||||||||||| || |||||||||||    
T  39826049 agggtaaatacctctttt-cgtccatataatattagcgaatttcgattttagtccct 39826104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 20996046 - 20995933
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||| ||||||||||||| ||||||||||||||||||||||   |||||||||| | |          ||||||||| ||| |||||||| ||||||||    
T  20996046 agggttaatacctcttttt-gtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattct 20995948  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  20995947 tccacttttggtccc 20995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 24468002 - 24467892
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||    || ||||||||||| |||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  24468002 gggtaaatacctctttt----ccatgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 24467907  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  24467906 tccacttttggtccc 24467892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 7473993 - 7473927
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||| ||| | |||| |||||| ||||||| ||||    
T  7473993 ttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgtgccatgtatgcagat 7473927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 20995962 - 20995928
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttatt 276  Q
    |||||||||||||| ||||||||||||||||||||    
T  20995962 gtaatttcatattcttccacttttggtcccttatt 20995928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 17606376 - 17606421
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| || ||||||||| |||||||||||| ||||||||||    
T  17606376 tttagattttgttcctgtaatttcatattcttccacttttggtccc 17606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 4907040 - 4907076
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  4907040 gtccctgtaatttcatattcttccacttttggtccct 4907076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 8293107 - 8293071
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  8293107 gtccctgtaatttcatattcttccacttttggtccct 8293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 18462440 - 18462527
Alignment:
Q  210 tgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||| ||||||| ||| | ||||||||||  |||||||||||| |||||| |||||| ||| ||||| ||||| ||||||| ||||    
T  18462440 tgtaatttcatattcctcccacttttggtccctataatttcatattactccacgtttggt-cctcattttgcgtgccatgtatgcagat 18462527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 34749215 - 34749251
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  34749215 gtccccgtaatttcatattcttccacttttggtccct 34749251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 39711372 - 39711336
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  39711372 gtccccgtaatttcatattcttccacttttggtccct 39711336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 39826356 - 39826312
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  39826356 tttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 43400752 - 43400807
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||||||||| |||| || |||||| |||||||||||||||| ||||||    
T  43400752 agggttaatacctctttt-cgtctctataatatgagcgaattccggttttggtccct 43400807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 10108369 - 10108483
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108369 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108467  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  10108468 ttccacttttggtccc 10108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 14820295 - 14820407
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| |||||||||    
T  14820295 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820393  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  14820394 ccacttttggtccc 14820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 5554868 - 5554923
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5554868 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 5554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 21147927 - 21147990
Alignment:
Q  119 ttattgagagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21147927 ttattgaaagggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 21147990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 43851665 - 43851719
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43851665 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 43851719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 10108547 - 10108613
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  10108547 ttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 10108613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 17623115 - 17623029
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgta 290  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  17623115 gtccctgtaatttcaaattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgta 17623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 10108749 - 10108635
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108749 agggttaatacctctttt-cgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108651  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  10108650 ttccacttttggtccc 10108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 14820673 - 14820559
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  14820673 agggttaatacctctttta-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 14820575  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  14820574 ttccacttttggtccc 14820559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18044205 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 22494561 - 22494622
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  22494561 ttttggtcccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatg 22494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 10171522 - 10171467
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10171522 agggtaaataccgctttt-cgtccctgtaatattagcgaattccggttttagtccct 10171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 7689902 - 7689849
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  7689902 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 43851865 - 43851799
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||  ||||||| ||||    
T  43851865 ttttggtccctgtaatttcatattcctccacttttgatccctcattttacgtgtcatgtatgcagat 43851799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 2583470 - 2583563
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||| |||||| ||||||| ||| ||||||| ||||    
T  2583470 gtccctgtaatttcagattcctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgtatgcagat 2583563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 42113212 - 42113119
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| ||||||| ||| | ||||||||||  |||||||||||| ||||||||||||||||| |||||| |||  ||||||| ||||    
T  42113212 gtccctgtaatttcatattcctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgtatgcagat 42113119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21148315 - 21148260
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  21148315 agggtaaatacctctttt-cgtctctgtaatattagtgaattccggttttagtccct 21148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 30789886 - 30789831
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  30789886 agggtaaatacctctttt-cgtccctgtaatattagtaaattccggttttagtccct 30789831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 14767735 - 14767656
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||||||| || ||||||||||    
T  14767735 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 14767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 5555234 - 5555134
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||          ||||||||| |||||||||||| |||||||||||| |||||||||    
T  5555234 ttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcc 5555135  T
Q  240 c 240  Q
    |    
T  5555134 c 5555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 7689523 - 7689576
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  7689523 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggctttagtcc 7689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 7689700 - 7689766
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  7689700 ttttagtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 7689766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20877124 - 20877067
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  20877124 agggttaatacctcttttg-gtccctgtaatatgagcgaattccggttttagtccctat 20877067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 26136835 - 26136928
Alignment:
Q  205 gtccctgtaattccatatt-cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || ||| || ||| |||||||||  ||| ||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  26136835 gtccctgtaatttcagatttctcccacttttggtccttgtactttcagattcctccatttttggtccctcattttacgtgccatgtatgcagat 26136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 30789521 - 30789562
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  30789521 ttttcgtccctgtaatattagcgaattccgattttagtccct 30789562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 30789735 - 30789642
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||| ||||||| ||||||| ||| | |||||||||  ||||||||| ||||||||||||||| ||||| || |||||||| ||||||| ||||    
T  30789735 gtccttgtaatttcatattcctcccacttttggtccttgtaatttcagattcctccacttttgatccctcatcttacgtgccatgtatgcagat 30789642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 42112998 - 42113039
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42112998 ttttcgtccctgtaatattagcgaattccgattttagtccct 42113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 42605930 - 42605983
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgc 284  Q
    |||||||| | ||||||||| ||||||||||||||||||||| |||||||||||    
T  42605930 ttttggtcgctgtaatttcagattcctccacttttggtccctcattttacgtgc 42605983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 42606132 - 42606080
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  42606132 agggtaaatatctcttttt-gtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 43481694 - 43481642
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  43481694 agggtaaatatctctttt-cgtcactgtaatattagcgaattccggttttagtc 43481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 17622889 - 17622944
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  17622889 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagttttagtccct 17622944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26136684 - 26136739
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  26136684 agggtgaatacctctttt-cgttcctgtaatattagcgaattccagttttagtccct 26136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 35367409 - 35367464
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  35367409 agggtaaatacctcttttg-gtccctgcaatattagcgaattccggttttaatccct 35367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 21148164 - 21148086
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||||||| || |||| ||| | ||||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  21148164 gtccctgtaatttcagattcctcccacttttggtccta-taatttcaaattcctccacttttggtccctcattttacgtg 21148086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 26137063 - 26136950
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcccta-tnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| | ||||||||||||| |          |||||||| |||||||||||| || |||||    
T  26137063 agggtaaataccactttt-cgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattct 26136965  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  26136964 tccacttttggtccc 26136950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 5555046 - 5555112
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||  |||||| |||||||||||||| ||||||||||| || |||| ||||    
T  5555046 ttttggtccctgtaatttcgaattccttcacttttggtccctcattttacgtgccatttatgcagat 5555112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 38726686 - 38726743
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||| |||||| |||||| ||||||||||||| ||| |||||||||||||||||||||    
T  38726686 agggttaatacc-ctttttggtccctgtaatatgagcaaattccggttttagtccctat 38726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 5555169 - 5555129
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  5555169 gtccctgtaatttcatattcttccacttttggtcccttatt 5555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 10108670 - 10108630
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  10108670 gtccctgtaatttcatattcttccacttttggtcccttatt 10108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 14820594 - 14820554
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  14820594 gtccctgtaatttcatattcttccacttttggtcccttatt 14820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 42113360 - 42113309
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||||||||    
T  42113360 agggtaaatacatctttt-cgtccctgtaatattaacgaatttcggttttagt 42113309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22494454 - 22494497
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    |||||||| || ||||||||| ||||||||||||||||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtcc 22494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 21144865 - 21144827
Alignment:
Q  147 gtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctat 21144827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 21148005 - 21148050
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  21148005 tttagattttgtccctgtaatttcagattcttccacttttggtccc 21148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 40486642 - 40486683
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||||||||||||||| ||||||||| |||||||||||    
T  40486642 ttttggtccctgtaatattaacgaattccgattttagtccct 40486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 40487779 - 40487738
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  40487779 ttttggtccttgtaatattagcgaattccagttttagtccct 40487738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 1949651 - 1949702
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    ||||| ||||||||||||  ||||||||||||| | |||||||||||||||||    
T  1949651 agggttaatacctcttttg-gtccctgtaatatgatcgaattccggttttagt 1949702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 10108448 - 10108484
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10108448 gtccctgtaatttcatattcttccacttttggtccct 10108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 14820372 - 14820408
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  14820372 gtccctgtaatttcatattcttccacttttggtccct 14820408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 17623261 - 17623214
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||| | |||||||||||||||| ||||| |||||||||    
T  17623261 taaatacctctttt-catccctgtaatattagccaattctggttttagt 17623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 21148015 - 21148055
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  21148015 gtccctgtaatttcagattcttccacttttggtcccttatt 21148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 30789817 - 30789773
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  30789817 tttagattttgtccctgtaatttcagattcttccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 42605822 - 42605866
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccc 42605866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 7126145 - 7126052
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  7126145 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 7126052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 14143901 - 14144011
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  14143901 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 14143999  T
Q  226 tccatttttggt 237  Q
    |||| |||||||    
T  14144000 tccacttttggt 14144011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 14144051 - 14144144
Alignment:
Q  205 gtccctgtaattccatattc-ttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  14144051 gtccctgtaatttcagattccttccacttttggtccatgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 14144144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 14411696 - 14411751
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14411696 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 17762282 - 17762337
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17762282 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 17762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 23979279 - 23979166
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  23979279 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 23979181  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  23979180 tccacttttggtccc 23979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 24837168 - 24837282
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||          ||||||||| |||| ||||||| |||||||    
T  24837168 agggtaaatacctctttt-cgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24837266  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  24837267 ttccacttttggtccc 24837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 993751 - 993860
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 228  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||||||| ||||||| |||||||||||    
T  993751 ggtaaatacttctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaaa-ttagatttagtccttgtaatttcatattcttcc 993848  T
Q  229 atttttggtccc 240  Q
    | ||||||||||    
T  993849 acttttggtccc 993860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 20709439 - 20709347
Alignment:
Q  206 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||| || |||| ||| | ||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||    
T  20709439 tccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgtatgcagat 20709347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 41001729 - 41001678
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41001729 ggtaaatacct-tttttcgtccctgtaatattagcgaattccggttttagtcc 41001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 24650926 - 24650835
Alignment:
Q  206 tccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||| ||||||  |||   ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  24650926 tccctgtaatttcatatttctcccactttggtccctgtaatttcagattcctccatttttggtccctcattttacgtgccatgtatgcagat 24650835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 24837547 - 24837493
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  24837547 gggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccct 24837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 24651078 - 24651025
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24651078 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 993974 - 993882
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||| |||||| |||||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  993974 gtccctgtaatttcagattcctcccacttttggtccctgtaatt-catattcctccacttttggtccctcattttacgtgtcatgtatgcagat 993882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7126296 agggtaaatacctctttt-catccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 24074302 - 24074416
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||  ||          ||||||||| ||| |||||||| |||||||    
T  24074302 agggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattc 24074400  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  24074401 ttccacttttggtccc 24074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 41001370 - 41001465
Alignment:
Q  143 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 239  Q
    |||||||||||||||||||||||||| |||||||||||||| |          |||||||| |||||||||||| |||||||||||| |||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaa-ttagattttgtccctgtaatttcatattcttccacttttggtcc 41001465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 4919218 - 4919130
Alignment:
Q  205 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||| ||||||| ||||||| ||||  |||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | |||||||    
T  4919218 gtccttgtaatttcatattcctccaacttttggtcactgtaatttcaaattcctccacttttggtccctcattttacgtaccatgtatg 4919130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 6817122 - 6817177
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  6817122 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 6817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 17762661 - 17762606
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17762661 agggtaaatacctctttt-cgtccctgtagtattagcgaattctggttttagtccct 17762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 31799640 - 31799753
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||          ||||||||| |||||||||||| || |||||    
T  31799640 gggtaaatacctctttt-cgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  31799739 tccacttttggtccc 31799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 6817312 - 6817257
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  6817312 gtaatttcagattcctccatttttggtcccttattttacgtgccatgtatgcagat 6817257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 18336833 - 18336780
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18336833 gggtaaatacctctttt-cgtccctgtaa-attagcgaattccggttttagtccct 18336780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 27159327 - 27159222
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccattt 232  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||| | |         ||||||||| ||||||||||||  ||||||||||||||    
T  27159327 aatacctctttt-cgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaaa-tttagattttgtccctgtaattttatattcttccattt 27159230  T
Q  233 ttggtccc 240  Q
    ||||||||    
T  27159229 ttggtccc 27159222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 31800018 - 31799965
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31800018 agggaaaatacctctttt-cgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 17762432 - 17762520
Alignment:
Q  205 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| ||||||| |||   |||||||||| ||||||| | ||||||||||||||||||||| |||||| || | |||||||    
T  17762432 gtccctgtaatttcatattcctcccgcttttggtccctgtaattttagattcctccacttttggtccctcattttatgtcccatgtatg 17762520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 24837370 - 24837310
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 291  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||| | ||||||    
T  24837370 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtaccatgtat 24837310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 31799841 - 31799781
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 291  Q
    |||||||||| ||||||||| | ||||||||||||||||||| ||||||| ||| ||||||    
T  31799841 ttttggtccctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgtat 31799781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 4918988 - 4919103
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 223  Q
    |||||||||||||||||| | || |||||||||||||||||| |||||||||| ||| |            ||||||||| |||||||||||| ||||||    
T  4918988 agggtaaatacctctttt-catctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 4919086  T
Q  224 cttccatttttggtccc 240  Q
    |||||| ||||||||||    
T  4919087 cttccacttttggtccc 4919103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 18336467 - 18336521
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||    
T  18336467 gggtaaatatctctttt-cgtccctataatattagcgaattccgattttagtccct 18336521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 18336638 - 18336685
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccctcattttacgtg 18336685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 29445170 - 29445131
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  29445170 ttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 41001551 - 41001488
Alignment:
Q  234 tggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||| ||||||||| ||||||||| |||| |||||| ||||||||||| ||||||| ||||    
T  41001551 tggtccctgtaatttcagattcctccatttttagtccctcattttacgtgccatgtatgcagat 41001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 4919366 - 4919317
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  4919366 ggtaaatacctctttt-cgtctctggaatattagcgaattccggttttagt 4919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 7125923 - 7125972
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  7125923 aatacctctttt-cgttcctgtaatattagcgaattccgattttagtccct 7125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 7126227 - 7126182
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  7126227 tttagattttgtccctgtaatttcatattcttccacttttggtccc 7126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 14144280 - 14144166
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||| |||||||||||| |||| ||||||||||| ||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  14144280 agggttaatacctctttt-cgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattc 14144182  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  14144181 ttccacttttggtccc 14144166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 24650704 - 24650810
Alignment:
Q  130 gtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcca 229  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||| ||  | |         ||||||||| || ||||||||| ||||||||||||    
T  24650704 gtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaagatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  230 tttttggt 237  Q
     |||||||    
T  24650803 cttttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 30512287 - 30512342
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30512287 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 30552627 - 30552682
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30552627 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30552682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 6817431 - 6817388
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtc 238  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  6817431 tttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 24074490 - 24074545
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||| || |||| ||||    
T  24074490 gtaatttcaaatttctccacttttggtccctcattttacgtgccatatatgcagat 24074545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 24074596 - 24074561
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattt 277  Q
    |||||||||||||| |||||||||||||||||||||    
T  24074596 gtaatttcatattcttccacttttggtcccttattt 24074561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 14411847 - 14411909
Alignment:
Q  236 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||  ||||||| ||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgtatgtagat 14411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 994123 - 994011
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||| ||||  ||||| |||||| ||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  994123 gggtaaatacctttttt--gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattct 994026  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  994025 tccacttttggtccc 994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 22571090 - 22571131
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||| |||||||||||||||||||| |||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccct 22571131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 24074612 - 24074567
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24074612 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 27158990 - 27159042
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| | |||||||||    
T  27158990 agggttaatacctctttt-cgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 29444819 - 29444860
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  29444819 ttttcgtccctgtaatattaacgaattctgattttagtccct 29444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 4919068 - 4919104
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  4919068 gtccctgtaatttcatattcttccacttttggtccct 4919104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 7126217 - 7126181
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  7126217 gtccctgtaatttcatattcttccacttttggtccct 7126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 14144201 - 14144161
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  14144201 gtccctgtaatttcaaattcttccacttttggtcccttatt 14144161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14412044 - 14411989
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| | || || |||||||| |||||| ||||||||||||||    
T  14412044 agggtaaatacctctttt-catctctataatattaacgaatttcggttttagtccct 14411989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20709590 - 20709535
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||  |||||||||||||    
T  20709590 agggttaatacctctttt-cgtccatgtaatattaacgaattttggttttagtccct 20709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 27159068 - 27159108
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  27159068 gtccctgtaatttcagattcttccacttttggtcccttatt 27159108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 31799718 - 31799758
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  31799718 gtccctgtaatttcagattcttccacttttggtcccttatt 31799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 9266974 - 9267088
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  9266974 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 9267072  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  9267073 ttccacttttggtccc 9267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 30500042 - 30500154
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||| |         ||||||||| |||||||||||| |||||||||    
T  30500042 agggttaatacctctttt-catccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcatattctt 30500140  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  30500141 ccacttttggtccc 30500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14171965 - 14171910
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14171965 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14171910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14262415 - 14262360
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14262415 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 30500419 - 30500306
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |          ||||||||| |||||||||||| |||||| |    
T  30500419 agggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgt 30500321  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  30500320 tccacttttggtccc 30500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 27946246 - 27946189
Alignment:
Q  125 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  27946246 agagggtaaatacctctttt-cgtcccagtaatattagcgaattccggttttagtccct 27946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 14262244 - 14262171
Alignment:
Q  224 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||| ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  14262244 cttccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 14262171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 16721990 - 16722042
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16721990 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtc 16722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 16722370 - 16722256
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  16722370 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattc 16722272  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  16722271 ttccacttttggtccc 16722256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 35995677 - 35995791
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  35995677 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattc 35995775  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  35995776 ttccacttttggtccc 35995791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 5800605 - 5800718
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  5800605 gggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  226 tccatttttggtccc 240  Q
    |||||||||||||||    
T  5800704 tccatttttggtccc 5800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 14162021 - 14162109
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||    
T  14162021 gtccctgtaatttcagattcctcctaattttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgtatg 14162109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 19112763 - 19112818
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19112763 agggtaaatacctctttt-cgtccatgtaatattagcgaattccggttttagtccct 19112818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 45969914 - 45969969
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  45969914 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 45969969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 47575499 - 47575407
Alignment:
Q  206 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||| || |||| ||| |||||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  47575499 tccctgtaatttcaaattcctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatgcagat 47575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 14162248 - 14162194
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14162248 gggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 14162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 17465558 - 17465503
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  17465558 gtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagat 17465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 19720333 - 19720387
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  19720333 gggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 19720387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 43572541 - 43572620
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  43572541 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtg 43572620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 9267176 - 9267110
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  9267176 ttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtacaatgtatgcagat 9267110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 49986705 - 49986771
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  49986705 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagat 49986771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 21633046 - 21633139
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||  ||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  21633046 gtccctgtaatttcagattcctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagat 21633139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 49986526 - 49986578
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  49986526 agggtaaatacctctttt-cgtccctgtaatattagagaattccggttttagtc 49986578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 4204907 - 4204843
Alignment:
Q  233 ttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  4204907 ttggtctctgtaatttcatattactccacttttggtccctcattttacgtgccatgtatgcagat 4204843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 5800755 - 5800843
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||| ||||||||||| ||||||| ||| |||||||    
T  5800755 gtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacatgccatgtatg 5800843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 9267353 - 9267298
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  9267353 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 9267298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 11003731 - 11003786
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  11003731 agggtaaatacctcttttt-gtccttgtaatattaccgaattccggttttagtccct 11003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 14161871 - 14161984
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||           ||||||||  |||||||||||| ||||||||    
T  14161871 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattct 14161969  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  14161970 tccacttttggtccc 14161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 30500268 - 30500176
Alignment:
Q  206 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||| || |||| ||| | |||||||||  ||||||||| |||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  30500268 tccctgtaatttcagattcctcccacttttggtccatgtaatttcaaattccttcacttttggtccctcattttacgtgccatgtatgcagat 30500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 35996054 - 35995999
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  35996054 agggtaaatacatctttt-cgtccctgtaatattagcgaattccgattttagtccct 35995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 45970065 - 45970153
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||  |||||||    
T  45970065 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtgtcatgtatg 45970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 45970295 - 45970240
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  45970295 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtccct 45970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 14262049 - 14262088
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14262049 ttttcgtccctgtaatattagcgaattccggttttagtcc 14262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 15328610 - 15328689
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||||||| || ||||||||||    
T  15328610 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 15328689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 16722171 - 16722234
Alignment:
Q  234 tggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| ||||    
T  16722171 tggtccctgtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatgcagat 16722234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 19113143 - 19113089
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  19113143 gggtaaatacctctttt-cgtccctataatattaacgaattccggttttagtccct 19113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 38283738 - 38283793
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  38283738 gtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 38283793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 45003859 - 45003761
Alignment:
Q  143 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||||||||||||||||||||| |||||||||| ||| |          |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  45003859 tttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattcttccacttttggtccc 45003761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 14171787 - 14171721
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||| ||||||||||| ||||||| ||||    
T  14171787 ttttggtccctgtaatttcagattcctccatttttgatccctcattttacgtgccatgtatgcagat 14171721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 19112966 - 19112900
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| | ||||||| ||||    
T  19112966 ttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtaccatgtatgcagat 19112900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 20853694 - 20853743
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20853694 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 27946114 - 27946163
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27946114 aatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccct 27946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 35995879 - 35995813
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||| ||||| |||||||||| |||||||||||||||||||| ||||||||||  ||||||| ||||    
T  35995879 tttttgtccctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgtatgcagat 35995813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 45003673 - 45003739
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||| ||||    
T  45003673 ttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgtatgcagat 45003739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 21633275 - 21633161
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||||| || | ||||||||||||||||||||||| | ||||||||||||||           ||||||||| |||||||||||| || ||||    
T  21633275 agggtaaatacctattct-cgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattc 21633177  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  21633176 ttccacttttggtccc 21633161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 43572388 - 43572502
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  43572388 agggtaaatacatctttt-cgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattc 43572486  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  43572487 ttccacttttggtccc 43572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 5800982 - 5800870
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||  ||          ||||||||| |||| ||||||| ||||||||    
T  5800982 gggttaatacctctttt-cgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 5800885  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  5800884 tccacttttggtccc 5800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 24490298 - 24490243
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    
T  24490298 agggtaaatatct-tttttcctccctgtaatattagtgaattccggttttagtccct 24490243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 33372405 - 33372456
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  33372405 agggtaaatatctctttt-cgtccctgtaatattagcgaattctggttttagt 33372456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 33372583 - 33372635
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||| | ||||||||||||||||||||||||| ||||| ||||||||||    
T  33372583 ttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtg 33372635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 35740830 - 35740870
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccc 182  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  35740830 ttttggtccctgtaatattagcgaattccggttttagtccc 35740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 49986907 - 49986856
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  49986907 agggtaaatacctctttt-cgtcccagtaatattagcgaatttcggttttagt 49986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 52552891 - 52552827
Alignment:
Q  233 ttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||| ||||||||| |||||| |||||||||||||| ||||||||||  ||||||| ||||    
T  52552891 ttggtccctgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatgcagat 52552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 3426027 - 3425973
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 182  Q
    ||||| ||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  3426027 agggttaatacctcttttg-gcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 20853886 - 20853831
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||| | ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  20853886 gtaattttagattcctccacttttggtccctcattttacgtgccatgtatgcagat 20853831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 20854074 - 20853961
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  20854074 agggtaaatatctctttt-cgtccatgtaatattagcgaatttcggttttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  20853975 tccacttttggtccc 20853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 14171586 - 14171635
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  14171586 agggtaaataccactttt-cgtccctgtaatattagcgaattccgatttta 14171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 21632900 - 21632940
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaatt 168  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  21632900 agggtaaatacctctttt-cgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 35741949 - 35741908
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  35741949 ttttggtccctgtaatattagcgaattccagttttagtccct 35741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 36991024 - 36990983
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  36991024 ttttggtccctgtaatattagcgaatttcggttttagtccct 36990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 37016464 - 37016423
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  37016464 ttttggtccctgtaatattagcgaatttcggttttagtccct 37016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 45003496 - 45003552
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  45003496 gggtaaatatctctttt-cgtccccgtaatattagcaaattccggtttcagtccctat 45003552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 3424773 - 3424828
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  3424773 agggttaatacctcttttg-gtccctgtaatattagcgatttccggttttggtccct 3424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 16722291 - 16722251
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  16722291 gtccctgtaatttcatattcttccacttttggtcccttatt 16722251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 17649384 - 17649337
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||    
T  17649384 taaatacctctttt-cgaccctgtaatactagcgaattccggttttagt 17649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 30500119 - 30500159
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  30500119 gtccctgtaatttcatattcttccacttttggtcccttatt 30500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 33372783 - 33372732
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||| |||||| |||||||||||||||| || |||||||    
T  33372783 agggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagt 33372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 38283563 - 38283602
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  38283563 ttttcatccctgtaatattaacgaattccggttttagtcc 38283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 52553065 - 52552953
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||||||| |||||| ||||| ||||||||||||||||||  |||||||||||  ||          ||||||||| ||| |||||||| |||||||||    
T  52553065 ggtaaatacatctttt-cgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattctt 52552967  T
Q  227 ccatttttggtccc 240  Q
    ||| ||||||||||    
T  52552966 ccacttttggtccc 52552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 5800899 - 5800865
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttatt 276  Q
    |||||||||||||| ||||||||||||||||||||    
T  5800899 gtaatttcatattcttccacttttggtcccttatt 5800865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 17465746 - 17465697
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||    
T  17465746 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 11003882 - 11003943
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 265  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  11003882 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 14262104 - 14262149
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  14262104 tttagattttgtccctgtaatttcagattcttccacttttggtccc 14262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 19112833 - 19112878
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  19112833 tttagattttgtccctggaatttcatattcttccacttttggtccc 19112878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 20853764 - 20853809
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  20853764 tttagattttgtccctataatttcatattcttccacttttggtccc 20853809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 9267053 - 9267089
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  9267053 gtccctgtaatttcatattcttccacttttggtccct 9267089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 14161949 - 14161985
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  14161949 gtccctgtaatttcatattcttccacttttggtccct 14161985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 14262114 - 14262154
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  14262114 gtccctgtaatttcagattcttccacttttggtcccttatt 14262154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17465366 - 17465417
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    ||||||||||||||||||| |||| | |||||||||||||||| | |||||||    
T  17465366 agggtaaatacctcttttt-gtccttttaatattagcgaattctgattttagt 17465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 19112851 - 19112883
Alignment:
Q  244 aatttcatattcctccacttttggtcccttatt 276  Q
    |||||||||||| ||||||||||||||||||||    
T  19112851 aatttcatattcttccacttttggtcccttatt 19112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 43572769 - 43572718
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||    
T  43572769 agggtaaatacctctttt-catccctgtaatattgacaaattccggttttagt 43572718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 20419536 - 20419649
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  20419536 gggtaaatacctctttt-cgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 20419634  T
Q  226 tccatttttggtccc 240  Q
    |||||||||||||||    
T  20419635 tccatttttggtccc 20419649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 23705039 - 23704926
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  23705039 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  23704940 tccacttttggtccc 23704926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 20963872 - 20963760
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||| || |||||    
T  20963872 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattct 20963774  T
Q  226 tccatttttggtcc 239  Q
    | || |||||||||    
T  20963773 ttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 20963723 - 20963630
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| ||||||| ||| | |||||||||  |||||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||    
T  20963723 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcttccacttttggtccctcattttacgtgccatgtatgcagat 20963630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 28218542 - 28218428
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  28218542 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 28218444  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  28218443 ttccacttttggtccc 28218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 41600337 - 41600223
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  41600337 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 41600239  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  41600238 ttccacttttggtccc 41600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 23704812 - 23704904
Alignment:
Q  206 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  23704812 tccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagat 23704904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 28218177 - 28218232
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28218177 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 28218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 20419737 - 20419671
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  20419737 ttttggtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgtatgcagat 20419671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 31851467 - 31851374
Alignment:
Q  205 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| || || ||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  31851467 gtccctgtaatttcagattcctctcaattttgatccctgtaatttcatatttctccacttttggtccctcattttacgtgccatgtatgcagat 31851374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 44817043 - 44816970
Alignment:
Q  224 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  44817043 cttccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagat 44816970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 12006540 - 12006595
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  12006540 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 12006595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 20419915 - 20419861
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20419915 gggtaaatacctcttttt-gtccctgtaatattaacgaattccggttttagtccct 20419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 20458892 - 20458826
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  20458892 ttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagat 20458826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 41600159 - 41600093
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  41600159 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 41600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 23704662 - 23704710
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 177  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23704662 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 38880099 - 38879989
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 227  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||          ||||||||| |||||||||||| || |||||||    
T  38880099 gggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttagtcttta-aaaaaaaaatttagattttgtccctgtaatttcagattcttc 38880002  T
Q  228 catttttggtccc 240  Q
    || ||||||||||    
T  38880001 cacttttggtccc 38879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 20458691 - 20458746
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  20458691 agggtaaatacat-tttttcgtccctgtaatattaacgaattccggttttagtccct 20458746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 44816832 - 44816884
Alignment:
Q  129 ggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtc 44816884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 48672658 - 48672603
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  48672658 agggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagtccct 48672603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 6465855 - 6465909
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  6465855 gggtaaatatct-tttttcgtccatgtaatattagcgaattccggttttagtccct 6465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 16995200 - 16995313
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||| |          ||||||||| |||||||||||| || ||||||    
T  16995200 gggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattctt 16995298  T
Q  227 ccatttttggtccca 241  Q
    ||| |||||||||||    
T  16995299 ccacttttggtccca 16995313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 24194931 - 24195014
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattt 277  Q
    ||||||||| |||||||||||| || |||| || || ||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  24194931 tttagattttgtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcattt 24195014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 12006741 - 12006675
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||| | ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  12006741 ttttggtcactgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 12006675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 23383499 - 23383613
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat---nnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||            ||||||||| |||||| ||||| |||||||    
T  23383499 gggtaaatacttctttt-cgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  225 ttccatttttggtccc 240  Q
    |||||||||| |||||    
T  23383598 ttccattttttgtccc 23383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 38879723 - 38879837
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||   |          ||||||||| |||||||||||| |||||||    
T  38879723 gggtaaatacctctttt-cgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 38879821  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  38879822 ttccacttttggtccc 38879837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 12006919 - 12006805
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  12006919 agggtaaatacctctttt-cgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 12006821  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||||||||    
T  12006820 ttccacttttggtccc 12006805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 23383879 - 23383765
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct--atnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||  |          ||||||||| |||||||||||| |||||||    
T  23383879 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattc 23383781  T
Q  225 ttccatttttggtccc 240  Q
    |||||  |||||||||    
T  23383780 ttccacctttggtccc 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  24195250 gggtaaatacctctttt-cgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 41599958 - 41600010
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  41599958 gggtaaatacctctttt-catccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 48672276 - 48672328
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  48672276 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtc 48672328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 10409752 - 10409697
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  10409752 agggtaaatacctctttt-catccatgtaatattagcgaattccgattttagtccct 10409697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14647029 - 14646974
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  14647029 agggttaatacc-ctttttagtccctgtaatatgagcgaattccggttttagtccct 14646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 20459069 - 20459022
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttt 175  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20459069 agggtaaatacctctttt-cgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 25772363 - 25772414
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  25772363 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 7658342 - 7658292
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  7658342 ggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 7658292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 25772553 - 25772498
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  25772553 gtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagat 25772498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 10409551 - 10409617
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| ||||    
T  10409551 ttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatgcagat 10409617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 23383701 - 23383635
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| |||||| |||||||||||||| ||||||||||  ||||||| ||||    
T  23383701 ttttggtccttgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatgcagat 23383635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 33162915 - 33162862
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||||||||||||| |||| |||||||||||||||||| | ||||||||||    
T  33162915 agggtaaatacctctttt-cgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 48672480 - 48672414
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| ||||    
T  48672480 ttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatgcagat 48672414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 6466004 - 6466077
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattt 277  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  6466004 gtccctgtaatttcaaattcctcccacttttgatccctgtaatttcatattactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 31852209 - 31852157
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||    
T  31852209 agggttaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 33162705 - 33162778
Alignment:
Q  224 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||| |||||||||  ||||||||| ||| || |||||||||||||| |||||| |||| ||||||| ||||    
T  33162705 cttccacttttggtccgtgtaatttcagattacttcacttttggtccctcattttatgtgccatgtatgcagat 33162778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 38879952 - 38879859
Alignment:
Q  205 gtccctgtaattccatatt-cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| |||||| || ||| |||||||| |  |||||||| |||||||||  |||||||||| |||||| |||| ||||||| ||||    
T  38879952 gtccctgtaatttcatattcctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgtatgcagat 38879859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 48648457 - 48648396
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||| ||||||||| |||||||||||  |||||||||| ||||||| ||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgtatgcagat 48648396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 7657972 - 7658023
Alignment:
Q  131 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7657972 taaatacctctttt-cgtccatgtaatattagcgaatttcggttttaatccct 7658023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 25772710 - 25772655
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  25772710 agggtaaatatctctttt-cgtccctataatattagtgaattccagttttagtccct 25772655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 28218391 - 28218323
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtccct 272  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  28218391 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattactccacttttggtccct 28218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 1250571 - 1250533
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  1250571 ttttcgtccttgtaatattagcgaattccagttttagtc 1250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtc 238  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 1250434 - 1250373
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 265  Q
    |||||||||||| || |||| ||| |||||||||| | |||||| |||||||||||||||||    
T  1250434 gtccctgtaatttcaaattcctcctatttttggtcactgtaattccatattcctccactttt 1250373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 1250516 - 1250471
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  1250516 tttagattttgtccctttaatttcatattcttccacttttggtccc 1250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 6466184 - 6466132
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||| |||||||| ||  |||||||||||||||||| |||||||||||    
T  6466184 agggtaaatatctcttttt-gtatctgtaatattagcgaatttcggttttagtc 6466132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 20963507 - 20963548
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||||| ||||||  ||||||||||||    
T  20963507 ttttcgtccctgtaatattagtgaattctagttttagtccct 20963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 20963563 - 20963608
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  20963563 tttagatttagtccctgtaattttagattcttccacttttggtccc 20963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 23258289 - 23258248
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| ||| |||||||||||||||||||||||||| ||||||    
T  23258289 ttttggtctctgtaatattagcgaattccggttttggtccct 23258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 24195106 - 24195061
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24195106 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24195061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 28218247 - 28218292
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  28218247 tttagattttgtccctgtaatttcagattcttccacttttggtccc 28218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 14630335 - 14630390
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||| |||||| || | |||||||| |||||||||||||||||||||||    
T  14630335 agggttaatacc-ctttttagttcttgtaatatgagcgaattccggttttagtccct 14630390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 23704961 - 23704925
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  23704961 gtccctgtaatttcatattcttccacttttggtccct 23704925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 33131651 - 33131687
Alignment:
Q  147 gtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  33131651 gtccctgtaatatgagcgatttccggttttagtccct 33131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 38879802 - 38879838
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38879802 gtccctgtaatttcatattcttccacttttggtccct 38879838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 48648263 - 48648314
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||||||| ||||||| |||||||||||||| |||||||| || |||||||||    
T  48648263 ggtaaatatctctttt-cgtccctgtaatatcagcgaatttcgattttagtcc 48648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 22263419 - 22263326
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  22263419 gtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 22263326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 23806330 - 23806217
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23806330 gggtaaatacctcttttt-gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23806232  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  23806231 tccacttttggtccc 23806217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 19251470 - 19251583
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  19251470 agggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 19251568  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  19251569 tccacttttggtccc 19251583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 17463470 - 17463356
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  17463470 agggtaaatacctctttt-cgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattc 17463372  T
Q  225 ttccatttttggtccc 240  Q
    ||||| ||||| ||||    
T  17463371 ttccacttttgatccc 17463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 17850587 - 17850643
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  17850587 gggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccctat 17850643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 23854894 - 23854801
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  23854894 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagat 23854801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 26236277 - 26236338
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagat 26236338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 23806102 - 23806190
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||||| || |||| ||| | ||||||||||  |||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  23806102 gtccctgtaatttcagattcctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtgccatgtatg 23806190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 26236474 - 26236360
Alignment:
Q  126 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct-atnnnnnnnnntttagatttagtccctgtaattccatattc 224  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |            ||||||||| |||||||||||| || ||||    
T  26236474 gagggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattc 26236376  T
Q  225 ttccatttttggtccc 240  Q
    ||||||||||||||||    
T  26236375 ttccatttttggtccc 26236360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 26560569 - 26560667
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||||||||||||||| |||||| || ||||||||||| |         |||||||||||||||||||||| || ||||||||| ||||||||||    
T  26560569 ttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaagatttagatttagtccctgtaatttcagattcttccacttttggtccc 26560667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 15106244 - 15106310
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  15106244 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagat 15106310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 19251647 - 19251713
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| |||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||    
T  19251647 ttttgatccctgtaatttcatattcctccacttttggtccatcattttacgtgccatgtatgcagat 19251713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 15106443 - 15106332
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 227  Q
    ||||||||||||||||| |||||| |||||||||||||||| || ||||||||||| |         ||||||||| |||||||||||| || |||||||    
T  15106443 gggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcagattcttc 15106345  T
Q  228 catttttggtccc 240  Q
    || ||||| ||||    
T  15106344 cacttttgatccc 15106332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 17850965 - 17850913
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17850965 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 17850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 22263572 - 22263520
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22263572 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 26560782 - 26560689
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  26560782 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatgcagat 26560689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19251848 - 19251793
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  19251848 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 19251793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 23854688 - 23854797
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23854688 gggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23854786  T
Q  226 tccatttttgg 236  Q
    |||| ||||||    
T  23854787 tccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 176  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23855072 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 12419087 - 12419044
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12419087 ttttggtccctgtaatattagcgaattccggttttagtccctat 12419044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 12431147 - 12431104
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12431147 ttttggtccctgtaatattagcgaattccggttttagtccctat 12431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 39878100 - 39878156
Alignment:
Q  125 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||    
T  39878100 agagggtaaatacctttttt--gtccttgtaatattagcgaattccggttttagtccct 39878156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 39878252 - 39878331
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 283  Q
    |||||||||||| ||||||| ||| | ||||||||||  |||||||| ||| ||||||||||||||||| ||||||||||    
T  39878252 gtccctgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtg 39878331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 42670717 - 42670771
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42670717 gggttaatacctctttt-cgtccctgtaatagtagcgaattccggttttagtccct 42670771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 42670920 - 42670861
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgta 290  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  42670920 ttttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgta 42670861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 13254801 - 13254763
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13254801 ttttcgtccctgtaatattagcgaattccggttttagtc 13254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 26135994 - 26136060
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||| | ||||||||||||||||||||||||||||||| | ||||||| ||||    
T  26135994 ttttggtccttgtaattttagattcctccacttttggtcccttattttacgtaccatgtatgcagat 26136060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 26135830 - 26135871
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  26135830 ttttcgtccctgtaatattagcgaattccgattttagtccct 26135871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 182  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  26560932 ggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 20498746 - 20498801
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  20498746 agggtaaatacctctttt-cgtctatgtaatattagcgaattacggttttagtccct 20498801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 22263205 - 22263304
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||| ||||||||||||||| |||||| |||||||||| ||||          ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  22263205 ttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 22263304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26236126 - 26236181
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||    
T  26236126 agggtaaatatctctttt-cgtccttgtaatattagcgaattctggttttagtccct 26236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 30960036 - 30959997
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30960036 ttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 42671097 - 42671043
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  42671097 gggtaaatacctcttttt-gtccctgtagtattagcgaatttcagttttagtccct 42671043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 13284609 - 13284543
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||||||| || |||||||||||||| |||| |||||  ||||||| ||||    
T  13284609 ttttggtccctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgtatgcagat 13284543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 17463105 - 17463143
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17463105 ttttcgtccctataatattagcgaattccggttttagtc 17463143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 20498922 - 20498988
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||  ||||||||||| ||||| ||||||||||| ||||||| ||||    
T  20498922 ttttggtccctgtaatttcagatcactccacttttgatccctcattttacgtgctatgtatgcagat 20498988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 23046706 - 23046763
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||| ||| ||||    
T  23046706 agggtaaatacctctttt-cgtccttgtaatatgagcgaattccggttttggtctctat 23046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 33290061 - 33290103
Alignment:
Q  141 tttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  33290061 tttttggtccctgtaatattagcgaattccagttttagtccct 33290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 13284778 - 13284737
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  13284778 ttttggtccctgtaatattagcgaatttcggttttagtccct 13284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 17463241 - 17463334
Alignment:
Q  205 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||| | ||||||| | ||||||||||| ||||||| ||| ||||||| ||||    
T  17463241 gtccctgtaatttcagattcctcccacttttggtccctgtaattttagattcctctaattttggtccctcattttacatgccatgtatgcagat 17463334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23047961 - 23047913
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 176  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  23047961 agggtaaatacctatttt-cgtccctgtaatatgagcgaattccggtttt 23047913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||    
T  26136195 gggtaaatacctctttt-cgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 30390655 - 30390594
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||| ||||||||| |||||| || ||||||||||| ||||||||||| ||||||| ||||    
T  30390655 gtccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgtatgcagat 30390594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 30958697 - 30958738
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  30958697 ttttggtccctgtaatattagcgaatttcggttttagtccct 30958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 44097737 - 44097786
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 176  Q
    |||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  44097737 agggtaaatatctatttttcgtccctgtaataagagcgaattccggtttt 44097786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 22263269 - 22263309
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  22263269 gtccctgtaatttcatattcttccacttttggtcccttatt 22263309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 30390528 - 30390572
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccc 30390572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttag 178  Q
    ||||| |||||| |||||| ||||||||||||| ||||||||||||||||||    
T  13284411 agggttaataccacttttt-gtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 15106067 - 15106121
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||||| |||||    
T  15106067 gggtaaatatctctttt-cgtccccgtaatattagcgaatttcggttttaatccct 15106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 33290133 - 33290168
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttattt 277  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33290133 gtaatttcatactcctccacttttggtcccttattt 33290168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 33290412 - 33290314
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||| ||||||||||||||||||||||| ||||||| ||||| |          |||||||| | || ||||||| |||||||||||| ||||||||||    
T  33290412 ttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaaaattagattttgaccttgtaatttcatattcttccacttttggtccc 33290314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 34548574 - 34548628
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| |||||| ||||||||||||||||| |||||  |||||||||||||    
T  34548574 gggtaaatacttctttt-cgtccctgtaatattagtgaattttggttttagtccct 34548628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 39878450 - 39878397
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||    
T  39878450 gggtaaatacctcttttt-gtcc-tgtaatattagcgaattccagttttcgtccct 39878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 22263498 - 22263456
Alignment:
Q  198 agatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccc 22263456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 33290226 - 33290272
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattt 277  Q
    |||||||||| ||||||||| || |||||||||||||||||| ||||    
T  33290226 ttttggtccctgtaatttcagatacctccacttttggtccctcattt 33290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Original strand, 42670803 - 42670837
Alignment:
Q  242 gtaatttcatattcctccacttttggtcccttatt 276  Q
    |||||||||||||| ||||||||||||||||||||    
T  42670803 gtaatttcatattcttccacttttggtcccttatt 42670837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 17850896 - 17850851
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccc 17850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 30390472 - 30390513
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||| |||||||||||||||||||| ||||| |||||    
T  30390472 ttttcgtccatgtaatattagcgaattccgattttaatccct 30390513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13254496 - 13254551
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||  ||| |||||||||||||||||||  ||||||| |||||    
T  13254496 agggtaaatacctctttc-cgttcctgtaatattagcgaattttggttttactccct 13254551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 19251548 - 19251584
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  19251548 gtccctgtaatttcatattcttccacttttggtccct 19251584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 22263491 - 22263455
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  22263491 gtccctgtaatttcatattcttccacttttggtccct 22263455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 23806252 - 23806216
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  23806252 gtccctgtaatttcatattcttccacttttggtccct 23806216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 26560632 - 26560672
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtcccttatt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  26560632 gtccctgtaatttcagattcttccacttttggtcccttatt 26560672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 30390537 - 30390573
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccct 272  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  30390537 gtccctgtaatttcatattcttccacttttggtccct 30390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 42670788 - 42670832
Alignment:
Q  196 ttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtccc 42670832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 44099000 - 44098953
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 176  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  44099000 gggtaaatatctctttt-cgtccctgtaatatgagcgaattctggtttt 44098953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 12355 - 12248
Alignment:
Q  133 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattcttccat 230  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||| |||||||||||| || |||||||||     
T  12355 aatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 12257  T
Q  231 ttttggtcc 239  Q
    |||||||||    
T  12256 ttttggtcc 12248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 7579 - 7524
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  7579 agggtaaatacctatttt-cgtccctgtaatattagcgaattccggttttagtccct 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 7227 - 7339
Alignment:
Q  129 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 226  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||  ||          ||||||||| |||||||||||| |||||||||    
T  7227 ggtaaatacctctttt-cgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7325  T
Q  227 ccatttttggtccc 240  Q
    ||| ||| ||||||    
T  7326 ccactttcggtccc 7339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 3868 - 3923
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3868 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 4070 - 4012
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgt 289  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  4070 ttttggtcactgtaatttcatattcctccacttttggtccctcattttacttgccatgt 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1786 - 1728
Alignment:
Q  126 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1786 gagggtaaatccctctttt-cgtccctgtaatattaacgaattccggttttagtccctat 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 1587 - 1653
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||  ||||||||| ||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  1587 ttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgtatgcagat 1653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 1410 - 1465
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| || ||| |||||||| ||||||| || |||||||||||    
T  1410 agggtaaatacctctttt-cgacccggtaatatttgcgaatttcgattttagtccct 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 4941 - 4828
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 225  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |          ||||||||| |||| ||||||| ||||||||    
T  4941 agggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattct 4843  T
Q  226 tccatttttggtccc 240  Q
    |||| ||||||||||    
T  4842 tccacttttggtccc 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 4740 - 4806
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagat 297  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  4740 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagat 4806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4561 - 4616
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  4561 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 8324 - 8378
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 182  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  8324 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 8700 - 8646
Alignment:
Q  128 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||  |||||| || |||| |||||||||||||||||||||||||||||    
T  8700 gggtaaatactgcttttt-gttcctgcaatattagcgaattccggttttagtccct 8646  T

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Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 4879 - 4932
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  4879 agggtaaatacctcttttt-gttcctgtaatattagcgaatttcggttttagtcc 4932  T

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Target: scaffold0477; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 4935 - 4991
Alignment:
Q  242 gtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagat 297  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| ||||||| ||||    
T  4935 gtaatttcatatttctcccacttttggtccctcattttacgtgccatgtatgtagat 4991  T

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Target: scaffold0477; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 5112 - 5073
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtcc 181  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  5112 ttttcgtccatgtaatattagcgaattccggtttttgtcc 5073  T

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Target: scaffold0477; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 5058 - 5013
Alignment:
Q  195 tttagatttagtccctgtaattccatattcttccatttttggtccc 240  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  5058 tttagatttagtccctgtaattttagattcttccacttttggtccc 5013  T

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Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 4666 - 4723
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  4666 agggtaaatacctctttta-gtccctgcaatattagcgaattccagttttagtccctat 4723  T

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Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 6058 - 6003
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  6058 agggtaaatacctcttttg-gtccctgcaatattagcgaattccgattttagtccct 6003  T

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Target: scaffold0352; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 4745 - 4782
Alignment:
Q  236 gtcccagtaatttcatattcctccacttttggtccctt 273  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctt 4782  T

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Target: scaffold0881 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 421 - 360
Alignment:
Q  231 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 292  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | |||||||    
T  421 ttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtaccatgtatg 360  T

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Target: scaffold0881; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 218 - 269
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 179  Q
    |||||| ||| |||||||| |||||||||| |||||||||||| |||||||||    
T  218 agggtagatatctcttttt-gtccctgtaaaattagcgaattctggttttagt 269  T

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Target: scaffold0881; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 596 - 541
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 183  Q
    |||||||||||||||||||  || ||| ||||||| ||||||||||||||| |||||    
T  596 agggtaaatacctcttttta-tctctggaatattaacgaattccggttttactccct 541  T

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Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 16007 - 15955
Alignment:
Q  127 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 180  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  16007 agggtaaatatctctttt-cgtccatgtaatattagcgaattccggttttagtc 15955  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 267 - 224
Alignment:
Q  142 ttttcgtccctgtaatattagcgaattccggttttagtccctat 185  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  267 ttttagtccctataatattagcgaattccagttttagtccctat 224  T

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