View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1199_low_149 (Length: 315)

Name: NF1199_low_149
Description: NF1199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1199_low_149
NF1199_low_149
[»] chr4 (46 HSPs)
chr4 (30-315)||(6405421-6405706)
chr4 (64-307)||(13792631-13792873)
chr4 (64-303)||(19918426-19918667)
chr4 (92-307)||(41526371-41526585)
chr4 (122-303)||(16629821-16630003)
chr4 (118-294)||(11477181-11477357)
chr4 (114-303)||(14600263-14600453)
chr4 (68-306)||(30651813-30652050)
chr4 (70-140)||(521963-522033)
chr4 (122-256)||(2829811-2829945)
chr4 (57-113)||(11477150-11477206)
chr4 (68-140)||(17421067-17421139)
chr4 (122-217)||(16210847-16210942)
chr4 (56-110)||(13402833-13402887)
chr4 (68-307)||(16058503-16058741)
chr4 (68-140)||(26458583-26458655)
chr4 (185-291)||(15622376-15622483)
chr4 (56-106)||(16253598-16253648)
chr4 (120-294)||(16397177-16397351)
chr4 (88-140)||(26458663-26458715)
chr4 (122-174)||(44889028-44889080)
chr4 (122-212)||(7846431-7846522)
chr4 (141-303)||(9835661-9835824)
chr4 (64-113)||(9835832-9835881)
chr4 (88-140)||(26458633-26458685)
chr4 (63-106)||(3487407-3487450)
chr4 (63-106)||(3496730-3496773)
chr4 (63-106)||(16249692-16249735)
chr4 (63-106)||(17827945-17827988)
chr4 (63-106)||(17837336-17837379)
chr4 (63-106)||(17984644-17984687)
chr4 (63-106)||(18105194-18105237)
chr4 (63-106)||(21846349-21846392)
chr4 (63-106)||(21855941-21855984)
chr4 (63-106)||(21902212-21902255)
chr4 (63-106)||(21911804-21911847)
chr4 (63-106)||(40922089-40922132)
chr4 (64-110)||(15670336-15670382)
chr4 (56-102)||(17161440-17161486)
chr4 (56-106)||(52499340-52499390)
chr4 (66-106)||(5292868-5292908)
chr4 (66-106)||(5302527-5302567)
chr4 (66-106)||(6692467-6692507)
chr4 (66-106)||(6702873-6702913)
chr4 (66-106)||(27680531-27680571)
chr4 (66-106)||(27690186-27690226)
[»] chr7 (46 HSPs)
chr7 (64-306)||(14248100-14248348)
chr7 (68-292)||(2991499-2991723)
chr7 (120-303)||(19586030-19586214)
chr7 (120-303)||(12770363-12770547)
chr7 (122-303)||(45553490-45553672)
chr7 (68-307)||(15988250-15988488)
chr7 (122-303)||(24540412-24540594)
chr7 (68-140)||(13285529-13285601)
chr7 (122-224)||(10415988-10416090)
chr7 (68-140)||(12827105-12827177)
chr7 (68-140)||(42595607-42595679)
chr7 (56-106)||(6534723-6534773)
chr7 (56-106)||(7019188-7019238)
chr7 (56-106)||(7034550-7034600)
chr7 (56-106)||(27989080-27989130)
chr7 (56-106)||(44897534-44897584)
chr7 (88-140)||(13285469-13285521)
chr7 (36-86)||(9007116-9007165)
chr7 (56-106)||(14944494-14944544)
chr7 (56-106)||(15372087-15372137)
chr7 (122-302)||(12491618-12491799)
chr7 (123-175)||(9007225-9007277)
chr7 (88-140)||(13285499-13285551)
chr7 (56-88)||(42621396-42621428)
chr7 (97-140)||(5615221-5615264)
chr7 (68-115)||(5615266-5615313)
chr7 (63-106)||(5927381-5927424)
chr7 (63-106)||(6545051-6545094)
chr7 (63-106)||(8501295-8501338)
chr7 (63-106)||(8511765-8511808)
chr7 (63-110)||(9535009-9535056)
chr7 (63-110)||(9545292-9545339)
chr7 (63-106)||(16131687-16131730)
chr7 (63-106)||(16142236-16142279)
chr7 (68-115)||(31824973-31825020)
chr7 (63-106)||(43983723-43983766)
chr7 (63-106)||(44907966-44908009)
chr7 (64-106)||(42621426-42621468)
chr7 (71-140)||(41027797-41027866)
chr7 (66-106)||(11626137-11626177)
chr7 (66-106)||(26347922-26347962)
chr7 (66-106)||(26362974-26363014)
chr7 (66-106)||(32098629-32098669)
chr7 (66-106)||(32109066-32109106)
chr7 (66-106)||(46497363-46497403)
chr7 (66-106)||(46507975-46508015)
[»] scaffold0016 (1 HSPs)
scaffold0016 (84-301)||(15693-15910)
[»] chr5 (40 HSPs)
chr5 (84-301)||(23376555-23376772)
chr5 (122-303)||(27273967-27274149)
chr5 (122-303)||(42090304-42090486)
chr5 (122-303)||(13571466-13571648)
chr5 (122-303)||(22173038-22173220)
chr5 (122-303)||(31917100-31917282)
chr5 (122-303)||(37298600-37298782)
chr5 (122-303)||(37817886-37818068)
chr5 (122-303)||(4037765-4037947)
chr5 (122-303)||(20764642-20764824)
chr5 (122-292)||(34130287-34130457)
chr5 (123-256)||(205313-205446)
chr5 (68-142)||(19548206-19548280)
chr5 (123-212)||(20897239-20897328)
chr5 (122-256)||(19780872-19781006)
chr5 (123-217)||(20904408-20904501)
chr5 (54-105)||(27580220-27580271)
chr5 (56-106)||(19888003-19888053)
chr5 (56-106)||(26191795-26191845)
chr5 (56-106)||(37538540-37538590)
chr5 (56-106)||(37647651-37647701)
chr5 (56-106)||(22244932-22244982)
chr5 (30-102)||(31105615-31105687)
chr5 (63-106)||(8765137-8765180)
chr5 (63-106)||(11410881-11410924)
chr5 (63-106)||(18209421-18209464)
chr5 (63-106)||(18218759-18218802)
chr5 (137-196)||(21483720-21483779)
chr5 (63-106)||(27412394-27412437)
chr5 (63-106)||(30943431-30943474)
chr5 (63-106)||(30952853-30952896)
chr5 (63-106)||(32070686-32070729)
chr5 (63-106)||(33939563-33939606)
chr5 (63-106)||(33949963-33950006)
chr5 (68-115)||(36316613-36316660)
chr5 (66-106)||(18361526-18361566)
chr5 (66-106)||(18390483-18390523)
chr5 (66-106)||(21753692-21753732)
chr5 (66-106)||(21762979-21763019)
chr5 (66-106)||(26202377-26202417)
[»] chr8 (24 HSPs)
chr8 (120-303)||(2689881-2690065)
chr8 (122-303)||(14893627-14893809)
chr8 (90-307)||(20851733-20851951)
chr8 (134-303)||(31991243-31991413)
chr8 (122-303)||(14881277-14881459)
chr8 (122-303)||(33773720-33773902)
chr8 (122-303)||(31998832-31999014)
chr8 (122-256)||(11430307-11430441)
chr8 (122-224)||(20530991-20531093)
chr8 (68-140)||(26362105-26362177)
chr8 (56-113)||(17269057-17269114)
chr8 (122-194)||(5759687-5759759)
chr8 (56-106)||(21202606-21202656)
chr8 (56-106)||(21213022-21213072)
chr8 (56-106)||(791954-792004)
chr8 (191-303)||(17269169-17269282)
chr8 (63-106)||(9324806-9324849)
chr8 (63-106)||(13674832-13674875)
chr8 (68-115)||(14437626-14437673)
chr8 (97-140)||(14437675-14437718)
chr8 (63-106)||(21334544-21334587)
chr8 (92-140)||(18536860-18536908)
chr8 (66-106)||(21987710-21987750)
chr8 (66-106)||(21997244-21997284)
[»] chr6 (32 HSPs)
chr6 (122-303)||(18705929-18706111)
chr6 (122-303)||(18711864-18712046)
chr6 (205-307)||(27787102-27787204)
chr6 (122-294)||(26168690-26168862)
chr6 (122-303)||(16321596-16321778)
chr6 (122-303)||(16333744-16333926)
chr6 (68-140)||(24361437-24361509)
chr6 (70-140)||(34765582-34765652)
chr6 (122-219)||(24505076-24505173)
chr6 (78-127)||(27787310-27787359)
chr6 (68-140)||(22223335-22223407)
chr6 (68-140)||(22249170-22249242)
chr6 (122-174)||(30657874-30657926)
chr6 (64-106)||(1597053-1597095)
chr6 (56-106)||(18201430-18201480)
chr6 (63-106)||(3286092-3286135)
chr6 (63-106)||(12455299-12455342)
chr6 (63-106)||(14791848-14791891)
chr6 (63-106)||(16898192-16898235)
chr6 (63-106)||(16908845-16908888)
chr6 (63-106)||(18160307-18160350)
chr6 (63-106)||(18170119-18170162)
chr6 (63-106)||(20912528-20912571)
chr6 (63-106)||(24921773-24921816)
chr6 (63-106)||(24930809-24930852)
chr6 (63-106)||(31357806-31357849)
chr6 (63-106)||(31367535-31367578)
chr6 (122-212)||(790903-790992)
chr6 (64-106)||(29540687-29540729)
chr6 (243-303)||(19361297-19361358)
chr6 (278-307)||(22223169-22223198)
chr6 (278-307)||(22249004-22249033)
[»] chr1 (35 HSPs)
chr1 (122-303)||(26193039-26193221)
chr1 (31-303)||(34823147-34823419)
chr1 (128-303)||(20317633-20317809)
chr1 (151-303)||(27066397-27066550)
chr1 (122-256)||(4950813-4950947)
chr1 (122-303)||(20314719-20314901)
chr1 (122-303)||(20328115-20328297)
chr1 (141-294)||(18058683-18058836)
chr1 (68-140)||(1974450-1974522)
chr1 (120-211)||(21821151-21821242)
chr1 (90-256)||(22961144-22961311)
chr1 (64-113)||(2370171-2370220)
chr1 (122-211)||(49333633-49333722)
chr1 (56-106)||(13965100-13965150)
chr1 (120-214)||(22956874-22956968)
chr1 (64-113)||(8540497-8540546)
chr1 (64-113)||(8605736-8605785)
chr1 (123-303)||(18096525-18096706)
chr1 (122-219)||(20309157-20309254)
chr1 (57-106)||(42034412-42034461)
chr1 (122-294)||(25039014-25039186)
chr1 (122-294)||(25044226-25044398)
chr1 (122-194)||(37012279-37012351)
chr1 (85-140)||(52939513-52939568)
chr1 (56-106)||(30549399-30549449)
chr1 (64-113)||(18058844-18058893)
chr1 (134-215)||(21793044-21793125)
chr1 (63-106)||(16155129-16155172)
chr1 (64-113)||(18383604-18383653)
chr1 (122-294)||(25823053-25823225)
chr1 (56-88)||(8540467-8540499)
chr1 (56-88)||(8605706-8605738)
chr1 (66-106)||(19748352-19748392)
chr1 (66-106)||(21458877-21458917)
chr1 (36-88)||(22956768-22956819)
[»] scaffold0553 (1 HSPs)
scaffold0553 (122-303)||(441-623)
[»] scaffold0031 (1 HSPs)
scaffold0031 (122-303)||(111366-111548)
[»] chr2 (28 HSPs)
chr2 (120-294)||(37862649-37862823)
chr2 (122-303)||(45191125-45191307)
chr2 (122-313)||(12570873-12571063)
chr2 (122-256)||(574553-574687)
chr2 (120-307)||(21109539-21109726)
chr2 (120-303)||(69698-69883)
chr2 (68-140)||(19342539-19342611)
chr2 (68-140)||(22902334-22902406)
chr2 (56-106)||(38930193-38930243)
chr2 (122-224)||(3605594-3605696)
chr2 (64-110)||(16902263-16902309)
chr2 (64-110)||(16995654-16995700)
chr2 (57-106)||(38957541-38957590)
chr2 (58-106)||(45014951-45014999)
chr2 (88-140)||(22902384-22902436)
chr2 (63-106)||(2998387-2998430)
chr2 (63-106)||(9502450-9502493)
chr2 (63-106)||(9513816-9513859)
chr2 (122-303)||(22687261-22687444)
chr2 (63-106)||(24696275-24696318)
chr2 (63-106)||(45025055-45025098)
chr2 (66-106)||(4458444-4458484)
chr2 (66-106)||(4468069-4468109)
chr2 (66-106)||(5346678-5346718)
chr2 (66-106)||(18651467-18651507)
chr2 (66-106)||(18663585-18663625)
chr2 (92-140)||(40408797-40408845)
chr2 (56-88)||(44638751-44638783)
[»] scaffold1705 (1 HSPs)
scaffold1705 (127-294)||(1196-1363)
[»] scaffold0034 (1 HSPs)
scaffold0034 (123-294)||(7716-7887)
[»] scaffold0014 (3 HSPs)
scaffold0014 (122-303)||(114132-114314)
scaffold0014 (122-303)||(146979-147161)
scaffold0014 (63-106)||(233768-233811)
[»] scaffold0141 (1 HSPs)
scaffold0141 (123-303)||(19048-19226)
[»] scaffold0122 (1 HSPs)
scaffold0122 (122-292)||(23450-23620)
[»] chr3 (28 HSPs)
chr3 (122-303)||(19827825-19828007)
chr3 (120-303)||(10508277-10508461)
chr3 (127-256)||(20744704-20744833)
chr3 (56-106)||(20492263-20492313)
chr3 (123-224)||(12376840-12376941)
chr3 (68-137)||(17734363-17734432)
chr3 (68-137)||(19035632-19035701)
chr3 (63-256)||(10011856-10012050)
chr3 (56-106)||(4023910-4023960)
chr3 (56-106)||(4371594-4371644)
chr3 (56-106)||(25433074-25433124)
chr3 (243-307)||(11459536-11459600)
chr3 (122-193)||(20293321-20293392)
chr3 (56-106)||(2489005-2489055)
chr3 (63-106)||(1685030-1685073)
chr3 (63-106)||(4381342-4381385)
chr3 (63-106)||(4782396-4782439)
chr3 (63-106)||(5655405-5655448)
chr3 (63-106)||(6432974-6433017)
chr3 (63-106)||(16335223-16335266)
chr3 (64-106)||(11765-11807)
chr3 (151-217)||(51978475-51978541)
chr3 (68-113)||(49387146-49387191)
chr3 (56-88)||(11805-11837)
chr3 (66-106)||(8973095-8973135)
chr3 (66-106)||(8983650-8983690)
chr3 (66-106)||(9537384-9537424)
chr3 (66-106)||(9547710-9547750)
[»] scaffold0005 (2 HSPs)
scaffold0005 (114-303)||(216925-217115)
scaffold0005 (63-106)||(309799-309842)
[»] scaffold0265 (1 HSPs)
scaffold0265 (120-211)||(11567-11658)
[»] scaffold0018 (3 HSPs)
scaffold0018 (114-217)||(58872-58975)
scaffold0018 (114-217)||(60300-60403)
scaffold0018 (114-217)||(54920-55026)
[»] scaffold0764 (1 HSPs)
scaffold0764 (70-140)||(545-615)
[»] scaffold0313 (2 HSPs)
scaffold0313 (70-140)||(5994-6064)
scaffold0313 (70-140)||(20151-20221)
[»] scaffold0015 (1 HSPs)
scaffold0015 (114-256)||(197030-197172)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-140)||(267140-267206)
[»] scaffold1468 (1 HSPs)
scaffold1468 (122-211)||(1614-1703)
[»] scaffold0059 (1 HSPs)
scaffold0059 (68-140)||(40337-40409)
[»] scaffold0811 (2 HSPs)
scaffold0811 (68-138)||(3281-3351)
scaffold0811 (156-307)||(3082-3234)
[»] scaffold0086 (1 HSPs)
scaffold0086 (56-106)||(55620-55670)
[»] scaffold0065 (1 HSPs)
scaffold0065 (56-106)||(16064-16114)
[»] scaffold0434 (1 HSPs)
scaffold0434 (68-132)||(14243-14307)
[»] scaffold0406 (1 HSPs)
scaffold0406 (90-182)||(15674-15768)
[»] scaffold0058 (1 HSPs)
scaffold0058 (205-303)||(50088-50187)
[»] scaffold0043 (1 HSPs)
scaffold0043 (56-106)||(92653-92703)
[»] scaffold0277 (1 HSPs)
scaffold0277 (63-106)||(19144-19187)
[»] scaffold0234 (1 HSPs)
scaffold0234 (64-106)||(20937-20979)
[»] scaffold0142 (2 HSPs)
scaffold0142 (134-307)||(28379-28553)
scaffold0142 (36-88)||(28567-28618)
[»] scaffold0106 (1 HSPs)
scaffold0106 (64-106)||(17173-17215)
[»] scaffold0047 (1 HSPs)
scaffold0047 (64-106)||(74509-74551)
[»] scaffold0254 (1 HSPs)
scaffold0254 (66-106)||(7622-7662)


Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 6405706 - 6405421
Alignment:
Q  30 atgatgaacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6405706 atgatgaacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaa 6405607  T
Q  130 caatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagata 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||    
T  6405606 caatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggggcccaggacacatggaacaagaccattggtcaccttccaacggcta 6405507  T
Q  230 caagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagcaacaagaaaaacaatagaaaag 315  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6405506 caagagcccaagaactctataagtataagtgaaaggcacatcattacttgcaccattgtaaagcaacaagaaaaacaacagaaaag 6405421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 307
Target Start/End: Complemental strand, 13792873 - 13792631
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagatt 163  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||  ||||| ||| |||||| ||| |||||||||    
T  13792873 catgatgaatccagatgaagatcatcaagaacgcaacaacattctgaagtattgtcaagaacacaacac-attcttatgttcagaatgtttacccagatt 13792775  T
Q  164 ttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaa 263  Q
    || |||||||| ||||||| ||||| ||||||||| ||||||||||| |||||| |||||| | ||||||| ||||| |||||||||| ||||||||| |    
T  13792774 ttcaagtaaaagctagtggggcccatgacacatggcacaagaccattagtcaccctccaacggctacaagatcccaagaactctataaatagaagtgaga 13792675  T
Q  264 ggcacatcattacttgcaccattgcaaagcaacaagaaaaacaa 307  Q
    ||| ||||||||||||||| |||||||||||| |||| ||||||    
T  13792674 ggctcatcattacttgcactattgcaaagcaaaaagagaaacaa 13792631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 64 - 303
Target Start/End: Original strand, 19918426 - 19918667
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagatt 163  Q
    ||||||||||| | |||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||| ||||| ||| || ||||||||| |||    
T  19918426 catgatgaacctagatgaagatcatcaagaacacaacaacattctgatgtattctcaagaacacaacaatattttgatgttcataatgttcacccatatt 19918525  T
Q  164 ttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaata-actctataagtagaagtgaa 262  Q
    || ||||||||  ||||||  ||||||| |||||| |||||||||||| ||||  |||||||| ||||||||  ||| | || |||||| |||||||| |    
T  19918526 ttcaagtaaaagttagtgggacccaggaaacatggcacaagaccattgctcactctccaacagctacaagaggtcaagacaccctataaatagaagtgga 19918625  T
Q  263 aggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||| || ||||||||||||| || ||||||| |||||||||    
T  19918626 aggctcagcattacttgcacctttacaaagcatacaagaaaa 19918667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 307
Target Start/End: Original strand, 41526371 - 41526585
Alignment:
Q  92 gaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccagga 191  Q
    |||| |||||||||| |||||||| |||||||| ||||||| ||||||||| || ||| ||| ||| | | ||| ||||||||   ||||| ||| ||||    
T  41526371 gaacacaacaacattttgaagtattctcaagaaaacaacaacattctgatgttcggaatgtttacctaaaatttcaagtaaaagtcagtggggcc-agga 41526469  T
Q  192 cacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaa 291  Q
    ||||||| | |  |||| |||| ||  |||||| | || |||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||||    
T  41526470 cacatggcaaatcaccaatggttacactccaacggctataagagcccaagaactctataaatagaagtgaaaggctcagcattacttgcaccattgcaaa 41526569  T
Q  292 gcaacaagaaaaacaa 307  Q
    ||||||||||||||||    
T  41526570 gcaacaagaaaaacaa 41526585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 16629821 - 16630003
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  16629821 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 16629920  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  16629921 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 16630003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 294
Target Start/End: Original strand, 11477181 - 11477357
Alignment:
Q  118 tcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacc 217  Q
    |||||||| |||||| ||||||| | |||||| ||| ||||||| ||| ||||||||   ||||| ||||||||||||||| | ||||| | |||| | |    
T  11477181 tcaagaacgcaacaacattctgaagttcagaatgtttacccagaatttcaagtaaaagtcagtggggcccaggacacatggcagaagactaatggttatc 11477280  T
Q  218 ttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
     |||||| |  |||||||||||| |||||||||| |||||||||||| | || |||||||||||||||| |||||||    
T  11477281 ctccaacggcaacaagagcccaagaactctataaatagaagtgaaagactcagcattacttgcaccatttcaaagca 11477357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 303
Target Start/End: Complemental strand, 14600453 - 14600263
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggt 213  Q
    ||||| ||||||||||||| |||||| || |||||| | | ||||||| |||  |||||||  | |||| ||||| ||||| ||| | || |||||||||    
T  14600453 atcctgaagaacacaacaacattctggtggtcagaatgcttacccagaatttcgagtaaaagtttgtggggcccaagacacgtggcataacaccattggt 14600354  T
Q  214 caccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||||| |||| | || | |||||||| |||||||||| || |  | |||||| || |||||||||||||||||||||||| |||||||||    
T  14600353 caccttacaacggctatatgagcccaaaaactctataaataaagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 14600263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 306
Target Start/End: Original strand, 30651813 - 30652050
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatg-atcagaaggttcacccagattttg 166  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| || ||||||||||||| ||| ||| | |||  |  |||  |||||| |||     
T  30651813 atgaacccagatgaagatcatgatgaacacaacaacattctgaagtattcttaagaacacaacaacattttgaagtatctca--gtttgcccagaatttc 30651910  T
Q  167 aagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggc 266  Q
    |||| |||  | ||||  |||||||||| ||| |||||||||||||||||  |||||| | |||||  || ||| |||||||||| ||||  | ||   |    
T  30651911 aagtgaaagttggtgggtcccaggacacgtggcacaagaccattggtcactctccaacggttacaaaggctcaagaactctataaatagagatcaagacc 30652010  T
Q  267 acatcattacttgcaccattgcaaagcaacaagaaaaaca 306  Q
     || ||| || |||||||||||||||||||||||||||||    
T  30652011 tcaacataacatgcaccattgcaaagcaacaagaaaaaca 30652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 522033 - 521963
Alignment:
Q  70 gaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  522033 gaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 2829811 - 2829945
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||| ||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||  ||||| |    
T  2829811 gaacacaacaacattctaatggtcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgggtaccttac 2829910  T
Q  222 aacagatacaagagcccaataactctataagtaga 256  Q
    ||| | || | ||||||||  ||||||||| ||||    
T  2829911 aacggctatatgagcccaaagactctataaataga 2829945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 11477150 - 11477206
Alignment:
Q  57 attcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  11477150 attcatacatgatgaactcagatgaagatcatcaagaacgcaacaacattctgaagt 11477206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 17421139 - 17421067
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||||||||  ||||||||||||||| |||||||    
T  17421139 atgaacccagatgaagatcataaagaacacaacaacattctgaagtattatcaagaacacaacaacattctga 17421067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 16210942 - 16210847
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacc 217  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| |||| |||||| ||| | || |||||||| ||||    
T  16210942 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggcccgggacacgtggcaaaacaccattggacacc 16210847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 13402887 - 13402833
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  13402887 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacattatga 13402833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 307
Target Start/End: Original strand, 16058503 - 16058741
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatg-atcagaaggttcacccagattttg 166  Q
    ||||||||| ||||||||||| |  ||| |||||||||| | |||||| |||||||||||||| | ||||||| | |||  |  |||  |||||| |||     
T  16058503 atgaacccatatgaagatcatgataaacacaacaacattctaaagtattctcaagaacacaacgacattctgaagtatctca--gtttgcccagaatttc 16058600  T
Q  167 aagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggc 266  Q
    |||| | |  ||||||  |||||||||| ||| |||||||||||||||||  ||||||   |||||  || ||| |||||||||| ||||  | ||   |    
T  16058601 aagtgagagttagtgggtcccaggacacgtggcacaagaccattggtcactctccaacgactacaaaggctcaagaactctataaatagagatcaatacc 16058700  T
Q  267 acatcattacttgcaccattgcaaagcaacaagaaaaacaa 307  Q
     || ||| || ||||||||||||||||||||||||||||||    
T  16058701 tcaacataacatgcaccattgcaaagcaacaagaaaaacaa 16058741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 26458583 - 26458655
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| | |||| ||||| |||| |||||||| |||||||||||||||| |||||||    
T  26458583 atgaacccagatgaagatcatgatgaacacaacagcattctgaagtattctcaagaacacaacaacattctga 26458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 15622483 - 15622376
Alignment:
Q  185 cccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataa-ctctataagtagaagtgaaaggcacatcattacttgcacc 283  Q
    |||||||||||||| |||||||||||||||||  |||||    || |||||| ||| || |||||| | |||||||| ||||| || |||||||||||||    
T  15622483 cccaggacacatggcacaagaccattggtcactctccaatgactaaaagagctcaagaaactctattaatagaagtggaaggctcaacattacttgcacc 15622384  T
Q  284 attgcaaa 291  Q
    ||||||||    
T  15622383 attgcaaa 15622376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 16253598 - 16253648
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  16253598 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 16253648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 294
Target Start/End: Original strand, 16397177 - 16397351
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    ||||||||||||| ||||||||| | | || ||||||||| | ||| ||||||||    |||| ||| ||||||||||| | || |||||||| |||| |    
T  16397177 aagaacacaacaacattctgatggtaataatgttcacccatagtttcaagtaaaagtatgtggggcctaggacacatggcataacaccattggacaccct 16397276  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
     |||| | || | ||||||||  ||||||||| ||||  |  ||||| || |||||||||||| |||||||||||    
T  16397277 acaacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcactattgcaaagca 16397351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 26458663 - 26458715
Alignment:
Q  88 tcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  26458663 tcaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 26458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 44889028 - 44889080
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaa 174  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||    
T  44889028 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaa 44889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 7846522 - 7846431
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagt-aaaatctagtggagcccaggacacatggaacaagaccattgg 212  Q
    ||||||||||| ||||||| | |||||| ||||||||||||||| |||| |||| || ||||  |||||||||||||| | || ||||||||    
T  7846522 gaacacaacaacattctgaagttcagaatgttcacccagattttcaagtaaaaagcttgtgggacccaggacacatggcataacaccattgg 7846431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 9835824 - 9835661
Alignment:
Q  141 tgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaa 240  Q
    ||||||||| ||| ||||| | ||| ||||||||  | |||| ||||||||||||||  | || |||||||| |||| | |||  | ||   ||||||||    
T  9835824 tgatcagaatgtttacccataatttcaagtaaaagtttgtggggcccaggacacatgacataacaccattggacaccctacaatggctatgtgagcccaa 9835725  T
Q  241 taactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
     |||||||||| ||||  | ||| || || |||||||||||||||||||||||| |||||||||    
T  9835724 aaactctataaatagagatcaaatgctcaacattacttgcaccattgcaaagcatacaagaaaa 9835661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 9835881 - 9835832
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    |||||||||||||||||||||| |||| |||| |||||||||| ||||||    
T  9835881 catgatgaacccaaatgaagattatcatgaacacaacaacattctgaagt 9835832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 26458633 - 26458685
Alignment:
Q  88 tcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||| |||||||||| ||||||||  ||||||||||||||| |||||||    
T  26458633 tcaagaacacaacaacattctgaagtattttcaagaacacaacaacattctga 26458685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 3487450 - 3487407
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  3487450 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 3487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 3496773 - 3496730
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  3496773 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 3496730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 16249692 - 16249735
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16249692 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 17827988 - 17827945
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  17827988 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 17827945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 17837379 - 17837336
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  17837379 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 17837336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 17984687 - 17984644
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  17984687 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 17984644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 18105237 - 18105194
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  18105237 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 18105194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 21846349 - 21846392
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  21846349 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 21846392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 21855941 - 21855984
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  21855941 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 21855984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 21902212 - 21902255
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  21902212 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 21902255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 21911804 - 21911847
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  21911804 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 21911847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 40922089 - 40922132
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  40922089 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 40922132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 15670336 - 15670382
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||||||| | ||||||||||||| |||| ||||||||||||||    
T  15670336 catgatgaacctagatgaagatcatcatgaacacaacaacattatga 15670382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 17161440 - 17161486
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaa 102  Q
    ||||||||||||| ||||||| ||||||||||||| |||| ||||||    
T  17161440 cattcatacatgaagaacccagatgaagatcatcatgaacacaacaa 17161486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 52499340 - 52499390
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||| ||||| ||||||| |||| ||||||||||    
T  52499340 cattcatacattatgaacccatatgaaaatcatcatgaacacaacaacatt 52499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 5292908 - 5292868
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  5292908 tgatgaacccagatgaagatcatcatgaacacaacaacatt 5292868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 5302567 - 5302527
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  5302567 tgatgaacccagatgaagatcatcatgaacacaacaacatt 5302527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 6692467 - 6692507
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  6692467 tgatgaacccagatgaagatcatcatgaacacaacaacatt 6692507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 6702873 - 6702913
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  6702873 tgatgaacccagatgaagatcatcatgaacacaacaacatt 6702913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 27680571 - 27680531
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  27680571 tgatgaacccagatgaagatcatcatgaacacaacaacatt 27680531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 27690226 - 27690186
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  27690226 tgatgaacccagatgaagatcatcatgaacacaacaacatt 27690186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 64 - 306
Target Start/End: Complemental strand, 14248348 - 14248100
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagatt 163  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||| ||||||| | |||||| ||| ||||||| |    
T  14248348 catgatgaacccagatgaagatcatcaagaacgcaacaacattctgatgtattctcaacaacacaacaacattctgaagttcagaatgtttacccagaat 14248249  T
Q  164 ttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctata-----agtagaag 258  Q
    || ||||||||   ||||| ||||| |||||||||||||||||||||||||||| | |||| | ||||||||||||| |||||||||     | || |||    
T  14248248 ttcaagtaaaagtcagtggggcccatgacacatggaacaagaccattggtcacccttcaacggctacaagagcccaagaactctataaatataatataag 14248149  T
Q  259 tgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaaaca 306  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||    
T  14248148 tgaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaaca 14248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 292
Target Start/End: Complemental strand, 2991723 - 2991499
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttga 167  Q
    |||||| ||||||||||||| |||||||||| ||||||| ||| |||| || ||||||||||||| ||| ||| | |||||| ||| ||||||| ||| |    
T  2991723 atgaactcaaatgaagatcaccaagaacgcagcaacattctgatgtattctaaagaacacaacaacattttgaagttcagaatgtttacccagaatttca 2991624  T
Q  168 agtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggca 267  Q
    ||||||||  | ||| ||||| ||||||||  |||| ||||||||||||| |||||| | ||||||||||||| |||| ||||| ||||||| |||||      
T  2991623 agtaaaattcaatggggcccaagacacatgacacaacaccattggtcaccctccaacggctacaagagcccaagaactttataaatagaagtaaaaggtt 2991524  T
Q  268 catcattacttgcaccattgcaaag 292  Q
    || ||||||||||| ||||||||||    
T  2991523 cagcattacttgcatcattgcaaag 2991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 120 - 303
Target Start/End: Original strand, 19586030 - 19586214
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || |||||||||||||||    
T  19586030 aagaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcacctt 19586129  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
     |||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  19586130 acaacggctatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 19586214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 303
Target Start/End: Original strand, 12770363 - 12770547
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    |||||||| |||| ||| | |||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||| ||| | |||||||||||||||| |    
T  12770363 aagaacacgacaacattttaatgatcagaatgttcacccagattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattggtcaccct 12770462  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||||||  ||||||||| ||| |||||||||| ||||  | || | | || ||||||||||||| |||||||||| |||||||||    
T  12770463 ccaacaactacaagagctcaagaactctataaatagagatcaaggcctcagcattacttgcacctttgcaaagcatacaagaaaa 12770547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 45553490 - 45553672
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  45553490 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 45553589  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  45553590 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 45553672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 307
Target Start/End: Complemental strand, 15988488 - 15988250
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatg-atcagaaggttcacccagattttg 166  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||||||||||||| ||| ||| | ||   |  |||  |||| |||||     
T  15988488 atgaacccagatgaagatcatgatgaacacaacaacattctgaagtattctcaagaacacaacaacattttgaagtatttca--gtttgcccaaattttc 15988391  T
Q  167 aagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggc 266  Q
    ||||||||  |||||| ||||||||||||||  ||||||||||||| |||| | |||| | || | |||||||| |||||||||| || |  | |||| |    
T  15988390 aagtaaaagttagtggggcccaggacacatgtcacaagaccattggacaccctacaacggctatatgagcccaaaaactctataaataaagatcaaagtc 15988291  T
Q  267 acatcattacttgcaccattgcaaagcaacaagaaaaacaa 307  Q
      | |||||||||||||||||||||||||||||||||||||    
T  15988290 ttagcattacttgcaccattgcaaagcaacaagaaaaacaa 15988250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 24540594 - 24540412
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||| ||||| ||| | || ||||||| ||||||| |    
T  24540594 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacgtggcataacaccattgatcaccttac 24540495  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  24540494 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 24540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 13285601 - 13285529
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  13285601 atgaacccacatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 13285529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 10415988 - 10416090
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||  ||| | || |||||||| |||||| |    
T  10415988 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacatgtggcataacaccattgggcaccttac 10416087  T
Q  222 aac 224  Q
    |||    
T  10416088 aac 10416090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 12827177 - 12827105
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| | |||| |||| |||||||||||||| |||||||||||||||| |||||||    
T  12827177 atgaacccagatgaagatcatgatgaacacaacgacattatgaagtattctcaagaacacaacaacattctga 12827105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 42595607 - 42595679
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||| | | |||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  42595607 atgaacccagatgaagatcttgatgaacacaacaacattctgaagtattctcaagaacacaacaacattctga 42595679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 6534723 - 6534773
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  6534723 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 6534773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 7019238 - 7019188
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  7019238 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 7019188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 7034600 - 7034550
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  7034600 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 7034550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 27989080 - 27989130
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  27989080 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 27989130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 44897534 - 44897584
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  44897534 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 44897584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 13285521 - 13285469
Alignment:
Q  88 tcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  13285521 tcaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 13285469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 9007116 - 9007165
Alignment:
Q  36 aacctagaaactcatacatacattcatacatgatgaacccaaatgaagatc 86  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  9007116 aacccagaaactcat-catacattcatatatgatgaacccaaatgaagatc 9007165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 14944494 - 14944544
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  14944494 cattcatatatgatgaacccagatgaagatcatcatgaacacaacaacatt 14944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 15372087 - 15372137
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  15372087 cattcatatatgatgaacccagatgaagatcatcatgaacacaacaacatt 15372137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 302
Target Start/End: Original strand, 12491618 - 12491799
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| | |||| ||||||||||  ||| ||||||||    | || | ||| ||||| ||| | || |||||||| || | | |    
T  12491618 gaacacaacaacattctgatggttagaatgttcacccagggtttcaagtaaaaatatgcggggaccaagacacgtggcataacaccattggacatcctac 12491717  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaa 302  Q
    ||| | || | ||||||||  ||||||||| ||||  |  ||||| ||||||||||||||||||||||||||| ||||||||    
T  12491718 aacggctatatgagcccaaagactctataaatagagatctaaggctcatcattacttgcaccattgcaaagcatacaagaaa 12491799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 9007225 - 9007277
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaat 175  Q
    |||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  9007225 aacataacaacattctgatggtcagaatgttcacccagattttcaagtaaaat 9007277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 13285551 - 13285499
Alignment:
Q  88 tcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||| |||||||||| ||||||||  ||||||||||||||| |||||||    
T  13285551 tcaagaacacaacaacattctgaagtattttcaagaacacaacaacattctga 13285499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 42621396 - 42621428
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcat 88  Q
    |||||||||||||||||||||||||||||||||    
T  42621396 cattcatacatgatgaacccaaatgaagatcat 42621428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 5615264 - 5615221
Alignment:
Q  97 caacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||||| |||||||| |||||||||||||||| |||||||    
T  5615264 caacaacattctgaagtattctcaagaacacaacaacattctga 5615221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 5615313 - 5615266
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtat 115  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  5615313 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtat 5615266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 5927381 - 5927424
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  5927381 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 5927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 6545051 - 6545094
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  6545051 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 6545094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 8501295 - 8501338
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  8501295 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 8501338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 8511765 - 8511808
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  8511765 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 8511808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 9535056 - 9535009
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||||||    
T  9535056 acatgataaacccagatgaagatcatcatgaacacaacaacattatga 9535009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 9545339 - 9545292
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||||||    
T  9545339 acatgataaacccagatgaagatcatcatgaacacaacaacattatga 9545292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 16131730 - 16131687
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16131730 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 16142279 - 16142236
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16142279 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16142236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 31824973 - 31825020
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtat 115  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  31824973 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtat 31825020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 43983723 - 43983766
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  43983723 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 43983766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 44907966 - 44908009
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  44907966 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 44908009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 42621426 - 42621468
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  42621426 catgatgaacccagatgaagatcatcatgaacacaacaacatt 42621468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 41027797 - 41027866
Alignment:
Q  71 aacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||| ||||||||| | | |||  |||||||||| |||||||| ||||||||||| |||| |||||||    
T  41027797 aacccagatgaagatcgtgatgaatacaacaacattctgaagtattctcaagaacacgacaacattctga 41027866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 11626177 - 11626137
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  11626177 tgatgaacccagatgaagatcatcatgaacacaacaacatt 11626137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 26347962 - 26347922
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  26347962 tgatgaacccagatgaagatcatcatgaacacaacaacatt 26347922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 26363014 - 26362974
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  26363014 tgatgaacccagatgaagatcatcatgaacacaacaacatt 26362974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 32098629 - 32098669
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  32098629 tgatgaacccagatgaagatcatcatgaacacaacaacatt 32098669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 32109066 - 32109106
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  32109066 tgatgaacccagatgaagatcatcatgaacacaacaacatt 32109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 46497363 - 46497403
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  46497363 tgatgaacccagatgaagatcatcatgaacacaacaacatt 46497403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 46507975 - 46508015
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  46507975 tgatgaacccagatgaagatcatcatgaacacaacaacatt 46508015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 84 - 301
Target Start/End: Original strand, 15693 - 15910
Alignment:
Q  84 atcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtgga 183  Q
    |||||||||||| |||||||||| | |||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||| |||| ||| |||||||     
T  15693 atcatcaagaacacaacaacattctcaagtattctcaataacacaacaacattctggtgatcagaatgttcacccagattttcaagtcaaagctagtggg 15792  T
Q  184 gcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcacc 283  Q
     ||||||| |||||| |||||||||||| ||||| || ||| | |||||||||| || |||||||||| |||||||||||| | || ||||||| |||||    
T  15793 acccaggaaacatggcacaagaccattgttcaccctctaacggttacaagagccgaagaactctataaatagaagtgaaagactcagcattactcgcacc 15892  T
Q  284 attgcaaagcaacaagaa 301  Q
    ||||||||||||||||||    
T  15893 attgcaaagcaacaagaa 15910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 84 - 301
Target Start/End: Complemental strand, 23376772 - 23376555
Alignment:
Q  84 atcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtgga 183  Q
    |||||||||||| |||||||||| | |||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||| |||| ||| |||||||     
T  23376772 atcatcaagaacacaacaacattctcaagtattctcaataacacaacaacattctggtgatcagaatgttcacccagattttcaagtcaaagctagtggg 23376673  T
Q  184 gcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcacc 283  Q
     ||||||| |||||| |||||||||||| ||||| || ||| | |||||||||| || |||||||||| |||||||||||| | || ||||||| |||||    
T  23376672 acccaggaaacatggcacaagaccattgttcaccctctaacggttacaagagccgaagaactctataaatagaagtgaaagactcagcattactcgcacc 23376573  T
Q  284 attgcaaagcaacaagaa 301  Q
    ||||||||||||||||||    
T  23376572 attgcaaagcaacaagaa 23376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 27274149 - 27273967
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  27274149 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 27274050  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  27274049 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 27273967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 42090486 - 42090304
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||| ||||||  | || || |||||||||||| |    
T  42090486 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccagggcacatgtcataacacaattggtcaccttac 42090387  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||||  || | |||||||| |||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  42090386 aacaactatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 42090304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 13571648 - 13571466
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||| ||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  13571648 gaactcaacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 13571549  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  13571548 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 13571466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 22173220 - 22173038
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||| ||||| ||| | || ||||||||||||||| |    
T  22173220 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacgtggcataacaccattggtcaccttac 22173121  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  22173120 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 22173038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 31917100 - 31917282
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||  ||||||||||| ||| | || ||||||||||||||| |    
T  31917100 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtgaggcccaggacacgtggcataacaccattggtcaccttac 31917199  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  31917200 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 31917282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 37298782 - 37298600
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||| ||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  37298782 gaactcaacaacattatgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 37298683  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | |||||||| |||||||||| ||||  | |||||| || ||||||| |||||||||||||||| |||||||||    
T  37298682 aacggctatatgagcccaaaaactctataaatagagatcaaaggctcagcattactagcaccattgcaaagcatacaagaaaa 37298600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 37817886 - 37818068
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||| ||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  37817886 gaactcaacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 37817985  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  37817986 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 37818068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 4037947 - 4037765
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  4037947 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 4037848  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| ||  ||||||||||| ||||||||||| |||||||||    
T  4037847 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagaattacttgcacaattgcaaagcatacaagaaaa 4037765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 20764642 - 20764824
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||| ||||| |||||| ||||||||||||||| |||||||| || ||||  |||||||||| ||| | || ||||||| ||||||| |    
T  20764642 gaacacaacaacattatgatgttcagaaagttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattgatcaccttac 20764741  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||    || | |||||||| |||||||||| ||||  | |||||| ||||||||||||||||||||||||||| |||||||||    
T  20764742 aatgactatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgcaaagcatacaagaaaa 20764824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 292
Target Start/End: Complemental strand, 34130457 - 34130287
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||| ||||||| |    
T  34130457 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgatcaccttac 34130358  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaag 292  Q
    |||   || | ||||||||  ||||||||| ||||  | |||||| || ||||||||||| ||||||||||    
T  34130357 aacgactatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcatcattgcaaag 34130287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 256
Target Start/End: Complemental strand, 205446 - 205313
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcca 222  Q
    |||||||||| ||| ||||| |||||| ||||||| ||||||| |||||||| || |||| ||||||||||| ||| | || |||||||| |||||| ||    
T  205446 aacacaacaacattatgatggtcagaatgttcacctagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgggcaccttaca 205347  T
Q  223 acagatacaagagcccaataactctataagtaga 256  Q
    || | || | |||||||| |||||||||| ||||    
T  205346 acggttatatgagcccaaaaactctataaataga 205313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 19548280 - 19548206
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctgatg 142  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||||||||||||| |||||||||    
T  19548280 atgaacccagatgaagatcatgatgaacacaacaacattctgaagtattctcaagaacacaacaacattctgatg 19548206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 20897239 - 20897328
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattgg 212  Q
    |||||||||| |||||||||| | ||| ||||||||| ||||| |||||||||||||||| ||||||||||  ||| | |||||||||||    
T  20897239 aacacaacaacattctgatgaaccgaatgttcacccatattttcaagtaaaatctagtggggcccaggacatgtggcaaaagaccattgg 20897328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19780872 - 19781006
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| ||| ||  |||||||||||||| |||||||| || |||| ||||||||||||||  | || |||||||  |||||| |    
T  19780872 gaacacaacaacattctgatggtcaaaatattcacccagattttcaagtaaaagcttgtggggcccaggacacatgacataacaccattgagcaccttac 19780971  T
Q  222 aacagatacaagagcccaataactctataagtaga 256  Q
    ||| | || | ||||||||  ||||||||| ||||    
T  19780972 aacggctatatgagcccaaagactctataaataga 19781006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 20904501 - 20904408
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacc 217  Q
    ||||||| || ||||||||| |||||| ||||||||||||||| |||||||| ||||||| |||||||| |  ||| | ||||||||||||||||    
T  20904501 aacacaagaacattctgatggtcagaatgttcacccagattttcaagtaaaagctagtggggcccaggata-gtggcaaaagaccattggtcacc 20904408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 27580271 - 27580220
Alignment:
Q  54 tacattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacat 105  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  27580271 tacattcatacatgatgaacccagatgaagatcatcatgaacacaacaacat 27580220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 19888053 - 19888003
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  19888053 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 19888003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 26191845 - 26191795
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  26191845 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 26191795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 37538590 - 37538540
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  37538590 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 37538540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 37647701 - 37647651
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  37647701 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 37647651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 22244932 - 22244982
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| | ||||||||    
T  22244932 cattcatacatgatgaacccagatgaagatcatcatgaacacgacaacatt 22244982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 31105615 - 31105687
Alignment:
Q  30 atgatgaacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaa 102  Q
    ||||||| || | |||||||| | | |||| |||||||||||||||| |||||||||||||| ||| ||||||    
T  31105615 atgatgagcccataaactcatgcgttcatttatacatgatgaacccatatgaagatcatcaaaaacacaacaa 31105687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 8765180 - 8765137
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  8765180 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 8765137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 11410924 - 11410881
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  11410924 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 11410881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 18209464 - 18209421
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  18209464 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 18209421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 18218802 - 18218759
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  18218802 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 18218759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 21483779 - 21483720
Alignment:
Q  137 ctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacat 196  Q
    |||||| |||||  ||||||||||||||| ||||||||  |||||| |||||||||||||    
T  21483779 ctgatggtcagagcgttcacccagattttcaagtaaaagttagtggggcccaggacacat 21483720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 27412394 - 27412437
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  27412394 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 27412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 30943474 - 30943431
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  30943474 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 30943431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 30952896 - 30952853
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  30952896 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 30952853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 32070686 - 32070729
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  32070686 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 32070729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 33939563 - 33939606
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  33939563 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 33939606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 33949963 - 33950006
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  33949963 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 33950006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 36316613 - 36316660
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtat 115  Q
    ||||||||| | ||||||||| ||||||||||||||||| ||||||||    
T  36316613 atgaacccagacgaagatcatgaagaacgcaacaacattctgaagtat 36316660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 18361526 - 18361566
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  18361526 tgatgaacccagatgaagatcatcatgaacacaacaacatt 18361566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 18390483 - 18390523
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  18390483 tgatgaacccagatgaagatcatcatgaacacaacaacatt 18390523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 21753692 - 21753732
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  21753692 tgatgaacccagatgaagatcatcatgaacacaacaacatt 21753732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 21762979 - 21763019
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  21762979 tgatgaacccagatgaagatcatcatgaacacaacaacatt 21763019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 26202417 - 26202377
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  26202417 tgatgaacccagatgaagatcatcatgaacacaacaacatt 26202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 120 - 303
Target Start/End: Complemental strand, 2690065 - 2689881
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    ||||||| ||||| ||||||||| |||||| |||||| |||||||| ||||||||   ||||| ||||||||||||||| | || ||||||||||||| |    
T  2690065 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagtcagtggggcccaggacacatggcataacaccattggtcaccct 2689966  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    | ||| | ||||||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  2689965 ctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 2689881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 14893809 - 14893627
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  14893809 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 14893710  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  14893709 aacggctatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 14893627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 307
Target Start/End: Original strand, 20851733 - 20851951
Alignment:
Q  90 aagaacgcaacaacattatgaagt--atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagccc 187  Q
    |||||| |||||||||| ||| ||  ||||| ||||| ||||||| ||||||||| | |||  |||||||| ||||||  ||||||| ||||||| ||||    
T  20851733 aagaacacaacaacattctgatgttcatcctgaagaagacaacaacattctgatggttaga--gttcaccctgattttctagtaaaagctagtggggccc 20851830  T
Q  188 aggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattg 287  Q
    |||| |||||| | |||||||||||||||| || ||| | ||||||||| |||||||||||||| ||||  | |||| | || ||||||||||||| |||    
T  20851831 aggatacatggtaaaagaccattggtcaccctctaacggctacaagagctcaataactctataaatagagatcaaagcctcaacattacttgcaccgttg 20851930  T
Q  288 caaagca-acaagaaaaacaa 307  Q
    ||||||| |||||||||||||    
T  20851931 caaagcatacaagaaaaacaa 20851951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 31991413 - 31991243
Alignment:
Q  134 attctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaag 233  Q
    ||||||||| |||||| ||||||||||||||| |||||||| || |||||||||||||||| ||| | || ||||||||||||||| |||| | || | |    
T  31991413 attctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggagcccaggacacgtggcataacaccattggtcaccttacaacggctatatg 31991314  T
Q  234 agcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  31991313 agcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 31991243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 14881459 - 14881277
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| |||||| |||||||| |||||||| || |||| ||||| ||||| ||| | || ||||||||||||||| |    
T  14881459 gaactcaacaacattctgatgttcagaatgttcactcagattttcaagtaaaagcttgtggggcccatgacacgtggcataacaccattggtcaccttac 14881360  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  14881359 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 14881277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 33773902 - 33773720
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||| ||||  ||| | || ||||||||| ||||| |    
T  33773902 gaacacaacaatattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacatgtggcataacaccattggttaccttac 33773803  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||| ||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  33773802 aacggctatatgagccaaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 33773720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 31999014 - 31998832
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || |||||| |||||||| |    
T  31999014 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccatttgtcaccttac 31998915  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||  | || |  |||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  31998914 aatggctatatcagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 31998832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 11430441 - 11430307
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| ||| || ||||||||||||||| ||||||||  | |||| ||| ||||||| ||||| || |||||||| |||||| |    
T  11430441 gaacacaacaacattctgatggtcaaaatgttcacccagattttcaagtaaaagtttgtggggcctaggacacgtggaataacaccattgggcaccttac 11430342  T
Q  222 aacagatacaagagcccaataactctataagtaga 256  Q
    ||| | || | ||||||||  ||||||||| ||||    
T  11430341 aacggctatatgagcccaaagactctataaataga 11430307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 20531093 - 20530991
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| || |||||||| ||| | || |||||||| |||||| |    
T  20531093 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggctcaggacacgtggcataacaccattgggcaccttac 20530994  T
Q  222 aac 224  Q
    |||    
T  20530993 aac 20530991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 26362177 - 26362105
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||| ||| |||||||    
T  26362177 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacagcaacattctga 26362105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 17269057 - 17269114
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  17269057 cattcacacatgatgaacccatatgaagatcatcaagaacacaacaacattctgaagt 17269114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 5759687 - 5759759
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacac 194  Q
    ||||||||||| ||||||||| |||||| ||||||||| ||||| |||||||| || |||| |||||||||||    
T  5759687 gaacacaacaacattctgatggtcagaatgttcacccatattttcaagtaaaagcttgtggggcccaggacac 5759759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 21202656 - 21202606
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  21202656 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 21202606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 21213072 - 21213022
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  21213072 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 21213022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 791954 - 792004
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||| |||||||||||||||| ||||||||||||| |||| ||||||||||    
T  791954 cattaatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 792004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 17269169 - 17269282
Alignment:
Q  191 acacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaa 290  Q
    |||||||| | || |||||||| |||| | |||| | || | ||||||||  ||||||||| ||||  | |||||| || ||||||||||||||||||||    
T  17269169 acacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaa 17269268  T
Q  291 agca-acaagaaaa 303  Q
    |||| |||||||||    
T  17269269 agcatacaagaaaa 17269282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 9324849 - 9324806
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  9324849 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 9324806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 13674832 - 13674875
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  13674832 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 13674875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 14437626 - 14437673
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtat 115  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  14437626 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtat 14437673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 14437675 - 14437718
Alignment:
Q  97 caacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||||| |||||||| |||||||||||||||| |||||||    
T  14437675 caacaacattctgaagtattctcaagaacacaacaacattctga 14437718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 21334544 - 21334587
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  21334544 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 21334587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 18536860 - 18536908
Alignment:
Q  92 gaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||| |||||||||| |||||||| || |||||| ||||||||||||||    
T  18536860 gaacacaacaacattctgaagtattctgaagaactcaacaatattctga 18536908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 21987750 - 21987710
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  21987750 tgatgaacccagatgaagatcatcatgaacacaacaacatt 21987710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 21997284 - 21997244
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  21997284 tgatgaacccagatgaagatcatcatgaacacaacaacatt 21997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 18706111 - 18705929
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||||| | || ||||||||||||||| |    
T  18706111 gaacacaacaacattctgatgttcagaatgttcatccagattttcaagtaaaagcttgtggggcccaggacacatggcataacaccattggtcaccttac 18706012  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||  | || | |||||||| |||||||||| ||||  | |||||| |||||||||||||||||||| |||||| |||||||||    
T  18706011 aatggctatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgaaaagcatacaagaaaa 18705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 18712046 - 18711864
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||||| | || ||||||||||||||| |    
T  18712046 gaacacaacaacattctgatgttcagaatgttcatccagattttcaagtaaaagcttgtggggcccaggacacatggcataacaccattggtcaccttac 18711947  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||  | || | |||||||| |||||||||| ||||  | |||||| || ||||||||||||||||| |||||| |||||||||    
T  18711946 aatggctatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgaaaagcatacaagaaaa 18711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 27787204 - 27787102
Alignment:
Q  205 accattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagcaacaagaaaaa 304  Q
    ||||||||||||||| |||| | |||| || ||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  27787204 accattggtcacctttcaacggctacaggaacccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaagcatcaagaaaaa 27787105  T
Q  305 caa 307  Q
    |||    
T  27787104 caa 27787102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 26168690 - 26168862
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || ||||||| |||||| | ||| | || |||||| |||||||| |    
T  26168690 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggagctcaggacgcgtggcataacaccattagtcaccttac 26168789  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
    ||| | || | |||||||| ||| |||||| ||||  | ||| || || || |||||||||||||||||||||    
T  26168790 aacggctatatgagcccaaaaacactataaatagagatcaaatgctcagcactacttgcaccattgcaaagca 26168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 16321596 - 16321778
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||| ||| | |||| ||||||||||||||| |||||||| || |||| ||||| ||||||||| | || |||||| ||||||||      
T  16321596 gaacacaacaacattctaatggttagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacatggcataacaccatttgtcaccttaa 16321695  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | |||||||| ||||| |||| ||||  | |||||| || ||||||||||||| |||||||||| |||||||||    
T  16321696 aacggctatatgagcccaaaaactcaataaatagagattaaaggctcaacattacttgcacccttgcaaagcatacaagaaaa 16321778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 16333744 - 16333926
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||| ||| | |||| ||||||||||||||| |||||||| || |||| ||||| ||||||||| | || |||||| ||||||||      
T  16333744 gaacacaacaacattctaatggttagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacatggcataacaccatttgtcaccttaa 16333843  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | |||||||| ||||| |||| ||||  | |||||| || ||||||||||||| |||||||||| |||||||||    
T  16333844 aacggctatatgagcccaaaaactcaataaatagagattaaaggctcaacattacttgcacccttgcaaagcatacaagaaaa 16333926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 24361509 - 24361437
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  24361509 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 24361437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 34765582 - 34765652
Alignment:
Q  70 gaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  34765582 gaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 34765652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 24505173 - 24505076
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    |||| |||||| ||||||| | |||||| ||||||||| ||||| |||||||| || |||| ||||||||||| ||| | || |||||||||||||||    
T  24505173 gaactcaacaacattctgaagttcagaatgttcacccatattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcacctt 24505076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 27787359 - 27787310
Alignment:
Q  78 atgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacac 127  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  27787359 atgaagatcatcaagaacggaacaacattatgatgtattctcaagaacac 27787310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 22223407 - 22223335
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||  || ||||| |||||||| ||||||| |||||||    
T  22223407 atgaacccatatgaagatcatgaagaacacaacaacatactgtagtattctcaagaaaacaacaacattctga 22223335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 22249242 - 22249170
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||  || ||||| |||||||| ||||||| |||||||    
T  22249242 atgaacccatatgaagatcatgaagaacacaacaacatactgtagtattctcaagaaaacaacaacattctga 22249170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 30657926 - 30657874
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaa 174  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||    
T  30657926 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaa 30657874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 1597053 - 1597095
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  1597053 catgatgaacccagatgaagatcatcatgaacgcaacaacatt 1597095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 18201430 - 18201480
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  18201430 cattcatacatgatgaacccagatgaagatcatcatgaacataacaacatt 18201480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 3286092 - 3286135
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  3286092 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 3286135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 12455299 - 12455342
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  12455299 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 12455342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 14791848 - 14791891
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  14791848 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 14791891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 16898192 - 16898235
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16898192 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16898235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 16908845 - 16908888
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16908845 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16908888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 18160307 - 18160350
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  18160307 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 18160350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 18170119 - 18170162
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  18170119 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 18170162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 20912528 - 20912571
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  20912528 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 20912571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 24921816 - 24921773
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  24921816 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 24921773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 24930852 - 24930809
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  24930852 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 24930809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 31357806 - 31357849
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  31357806 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 31357849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 31367535 - 31367578
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  31367535 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 31367578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 790992 - 790903
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattgg 212  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||| |||||||| || |||| | |||| |||| ||| | || ||||||||    
T  790992 gaacacaacaacattctgatgttcagaatgttcacccagaattt-aagtaaaagcttgtggggtccagtacacgtggcataacaccattgg 790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 29540687 - 29540729
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  29540687 catgatgaacccagatgaagatcatcatgaacacaacaacatt 29540729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 19361297 - 19361358
Alignment:
Q  243 actctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||||||||| || ||||||||||| || ||||||||||||  |||||||||| |||||||||    
T  19361297 actctataaataaaagtgaaaggctcaacattacttgcacttttgcaaagcatacaagaaaa 19361358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 307
Target Start/End: Complemental strand, 22223198 - 22223169
Alignment:
Q  278 tgcaccattgcaaagcaacaagaaaaacaa 307  Q
    ||||||||||||||||||||||||||||||    
T  22223198 tgcaccattgcaaagcaacaagaaaaacaa 22223169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 307
Target Start/End: Complemental strand, 22249033 - 22249004
Alignment:
Q  278 tgcaccattgcaaagcaacaagaaaaacaa 307  Q
    ||||||||||||||||||||||||||||||    
T  22249033 tgcaccattgcaaagcaacaagaaaaacaa 22249004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 26193221 - 26193039
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  26193221 gaacacaacaaaattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 26193122  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  26193121 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 26193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 303
Target Start/End: Original strand, 34823147 - 34823419
Alignment:
Q  31 tgatgaacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaac 130  Q
    ||||||||| | |||||||| |||||||||||   |||||||| |  ||||||||||| | |||| |||||||||| ||| |||| ||||||||||||||    
T  34823147 tgatgaacccataaactcat-catacattcatgtgtgatgaactcgtatgaagatcatgatgaacacaacaacattctgatgtattctcaagaacacaac 34823245  T
Q  131 aatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatac 230  Q
    || ||| ||||| |||||| |||  |||| ||||| |||||||| || ||||| ||||||||| |||| |||| | ||||||||||  |||||||| ||     
T  34823246 aacattttgatgttcagaatgtttgcccatattttcaagtaaaaactggtggaccccaggacatatggcacaaaatcattggtcactctccaacagctat 34823345  T
Q  231 aagagcccaa-taactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||||  |||  |||||||||| ||| |||| || || ||||||||| | |||| |||||||||| |||||||||    
T  34823346 aagaggtcaagaaactctataaataggagtggaatgctcatcattacatacacc-ttgcaaagcatacaagaaaa 34823419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 303
Target Start/End: Complemental strand, 20317809 - 20317633
Alignment:
Q  128 aacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacaga 227  Q
    ||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |||| |     
T  20317809 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 20317710  T
Q  228 tacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    || | ||| ||||  ||| ||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  20317709 tatatgagtccaaagactatataaatagagatcaaaggcgcagcattacttgcaccattgcaaagcatacaagaaaa 20317633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 303
Target Start/End: Original strand, 27066397 - 27066550
Alignment:
Q  151 gttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctata 250  Q
    ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||| ||| |||| | || | ||||||||  ||||||||    
T  27066397 gttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcatcttacaacggctatatgagcccaaagactctata 27066496  T
Q  251 agtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    | ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  27066497 aatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 27066550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 4950813 - 4950947
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||  || || || | ||||||||||||| |    
T  4950813 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacaagtgaaataacaacattggtcaccttac 4950912  T
Q  222 aacagatacaagagcccaataactctataagtaga 256  Q
    ||| | || | |||||||| |||||||||| ||||    
T  4950913 aacggctatatgagcccaaaaactctataaataga 4950947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 20314719 - 20314901
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| | |||| ||| ||||||||||| || ||||  || |||| ||||||||||| ||| | || ||||||||||| ||| |    
T  20314719 gaactcaacaacattctgatgtttagaatgtttacccagattttcaattaaatgcttgtggggcccaggacacgtggcataacaccattggtcatcttac 20314818  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  20314819 aacggctatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 20314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 20328297 - 20328115
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| ||| || |||||||| |||||| |||||||| || ||||  |||||||||| ||| | || ||||||||||||||| |    
T  20328297 gaactcaacaacattctgatgttcataatgttcaccctgattttcaagtaaaagcttgtgggtcccaggacacgtggcataacaccattggtcaccttac 20328198  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||| ||||  ||| ||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  20328197 aacggctatatgagtccaaagactatataaatagagatcaaaggcgcagcattacttgcaccattgcaaagcatacaagaaaa 20328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 18058836 - 18058683
Alignment:
Q  141 tgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaa 240  Q
    ||||||||| ||| ||||||| ||| |||||||| || |||| ||||| ||||||||| | || |||||||| |||| | |||| | || | ||||||||    
T  18058836 tgatcagaatgtttacccagaatttcaagtaaaagcttgtggggcccaagacacatggcataacaccattggacaccctacaacggctatatgagcccaa 18058737  T
Q  241 taactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
     |||||||||| ||||  | |||| | || ||||||||||||||||||||||||    
T  18058736 aaactctataaatagagatcaaagactcaacattacttgcaccattgcaaagca 18058683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 1974522 - 1974450
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  1974522 atgaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 1974450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 21821242 - 21821151
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattg 211  Q
    ||||||||||||| ||||||||| ||| || ||||||||| ||||| |||||||| ||||||| ||||||||||| ||| | ||||||||||    
T  21821242 aagaacacaacaacattctgatggtcaaaatgttcacccatattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattg 21821151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 256
Target Start/End: Original strand, 22961144 - 22961311
Alignment:
Q  90 aagaacgcaacaacattatgaagt--atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagccc 187  Q
    |||||| |||||||||||||| ||  ||||| | ||||||||||| ||||| ||| ||||||  |||||||||||||| |||||||| || |||| ||||    
T  22961144 aagaacacaacaacattatgatgttcatcct-aggaacacaacaacattctaatggtcagaattttcacccagattttcaagtaaaagcttgtggggccc 22961242  T
Q  188 aggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtaga 256  Q
    || |||| ||| | || |||||||| |||| | |||| | || | |||||||| |||||||||| ||||    
T  22961243 agaacacgtggcataacaccattggacaccctacaactgctatatgagcccaaaaactctataaataga 22961311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 2370220 - 2370171
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  2370220 catgatgaacccatatgaagatcatcaagaacacaacaacattatgaagt 2370171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 49333633 - 49333722
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattg 211  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| | ||||||||| ||| | || |||||||    
T  49333633 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacgtggcataacaccattg 49333722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 13965100 - 13965150
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  13965100 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 13965150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 22956874 - 22956968
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtc 214  Q
    ||||||||||||| | || |||| |||||| ||||||| | ||||| |||||||| || |||| | ||| ||||||||| |||||||||||||||    
T  22956874 aagaacacaacaacactcagatggtcagaatgttcacctaaattttcaagtaaaagctggtggggtccatgacacatggcacaagaccattggtc 22956968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 8540497 - 8540546
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  8540497 catgatgaacccaaatgaagatcatcatgaacacaacaacattctgaagt 8540546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 8605736 - 8605785
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  8605736 catgatgaacccaaatgaagatcatcatgaacacaacaacattctgaagt 8605785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 303
Target Start/End: Complemental strand, 18096706 - 18096525
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcca 222  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| ||||||||    |||| ||||| ||||  |||   || |||||||| || | | ||    
T  18096706 aacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagtgtgtggggcccatgacatgtggcttaacaccattggacatcctaca 18096607  T
Q  223 acagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |  | || | ||||||||  ||||||||| ||||  |  ||||| || |||||||||||||||||||||||| |||||||||    
T  18096606 atggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 18096525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 20309157 - 20309254
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    |||| |||||| ||||||||| | |||| ||||||||| ||||| |||||||| || || | ||||||||||| ||| | || |||||||||||||||    
T  20309157 gaactcaacaacattctgatgttaagaatgttcacccatattttcaagtaaaagcttgtagggcccaggacacgtggcataacaccattggtcacctt 20309254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 42034412 - 42034461
Alignment:
Q  57 attcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  42034412 attcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 42034461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 25039186 - 25039014
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| ||||||  |||||| ||| ||| ||||||||    |||| ||||| ||||| ||  | || |||||||| |||| | |    
T  25039186 gaacacaacaacattctgatggtcagaattttcacctagagtttcaagtaaaagtatgtggggcccaagacacgtgacataacaccattggacaccctac 25039087  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
    ||| | || | ||||||||  ||||||||| ||||  |  ||||| || ||||||||||||||||||||||||    
T  25039086 aacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagca 25039014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 25044398 - 25044226
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| ||||||  |||||| ||| ||| ||||||||    |||| ||||| ||||| ||  | || |||||||| |||| | |    
T  25044398 gaacacaacaacattctgatggtcagaattttcacctagagtttcaagtaaaagtatgtggggcccaagacacgtgacataacaccattggacaccctac 25044299  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
    ||| | || | ||||||||  ||||||||| ||||  |  ||||| || ||||||||||||||||||||||||    
T  25044298 aacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagca 25044226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 37012279 - 37012351
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacac 194  Q
    ||||||||||| ||||||||| ||| || ||||||||||||||| |||||||| || |||| ||| |||||||    
T  37012279 gaacacaacaacattctgatggtcaaaatgttcacccagattttcaagtaaaagcttgtggggcctaggacac 37012351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 52939568 - 52939513
Alignment:
Q  85 tcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  52939568 tcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 52939513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 30549449 - 30549399
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| || | ||||||||||    
T  30549449 cattcatacatgatgaacccagatgaagatcatcatgatcacaacaacatt 30549399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 18058893 - 18058844
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||||||| ||||||||||||| |||| |||||||||| ||||||    
T  18058893 catgatgaacccatatgaagatcatcatgaacacaacaacattctgaagt 18058844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 21793044 - 21793125
Alignment:
Q  134 attctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtca 215  Q
    ||||||||| || ||| ||||||||| ||||| |||||||| ||||||| || |||||||| ||| | || |||||||||||    
T  21793044 attctgatggtccgaatgttcacccatattttcaagtaaaagctagtggggcacaggacacgtggcaaaataccattggtca 21793125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 16155129 - 16155172
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16155129 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16155172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 18383604 - 18383653
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    |||||||||||||| |||||||||||||||||  ||| ||||| ||||||    
T  18383604 catgatgaacccaagtgaagatcatcaagaacataactacattctgaagt 18383653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 25823225 - 25823053
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggag-cccaggacacatggaacaagaccattggtcaccttc 220  Q
    ||||||||||| ||||||||| | | || ||||||| ||||||| |||||||| || |||| | |||| ||||| ||| | || | ||||| |||||||     
T  25823225 gaacacaacaacattctgatggttaaaatgttcacc-agattttcaagtaaaagcttgtgggggcccatgacacgtggtataacatcattgttcacctta 25823127  T
Q  221 caacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
    |||| | || | ||| ||||  ||||||||| ||||  |  || || || ||||||||||||||||||||||||    
T  25823126 caacggctatatgagtccaaagactctataaatagatatctaaagctcaacattacttgcaccattgcaaagca 25823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 8540467 - 8540499
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcat 88  Q
    ||||||||||||||||||||| |||||||||||    
T  8540467 cattcatacatgatgaacccagatgaagatcat 8540499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 8605706 - 8605738
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcat 88  Q
    ||||||||||||||||||||| |||||||||||    
T  8605706 cattcatacatgatgaacccagatgaagatcat 8605738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 19748392 - 19748352
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  19748392 tgatgaacccagatgaagatcatcatgaacacaacaacatt 19748352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 21458877 - 21458917
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  21458877 tgatgaacccagatgaagatcatcatgaacacaacaacatt 21458917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 22956768 - 22956819
Alignment:
Q  36 aacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcat 88  Q
    ||||||||||||||| |||||| | ||| |||||||||||| |||||||||||    
T  22956768 aacctagaaactcat-catacacttataaatgatgaacccagatgaagatcat 22956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 623 - 441
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  623 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 524  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  523 aacggctatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 111548 - 111366
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  111548 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 111449  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  111448 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 111366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 294
Target Start/End: Complemental strand, 37862823 - 37862649
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||  ||| | || | |||||||||||||    
T  37862823 aagaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacatgtggcataacatcattggtcacctt 37862724  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
     |||| | || | |||||||| |||||||||| ||||  | |||||| || ||||||||||||||||||||||||    
T  37862723 acaacggctatatgagcccaaaaactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagca 37862649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 45191125 - 45191307
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  45191125 gaactcaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 45191224  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  45191225 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaa 45191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 313
Target Start/End: Original strand, 12570873 - 12571063
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || ||||  |||||||||| ||| | || |||||||||||||||      
T  12570873 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattggtcaccttat 12570972  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaaacaatagaaa 313  Q
    | | | || | || ||||| |||||||||| ||| ||  |||||| || ||||||||||| |||||||||||| ||||| |||||||||||||    
T  12570973 agcggctatatgaacccaaaaactctataaatag-agacaaaggctcaacattacttgcatcattgcaaagcatacaag-aaaacaatagaaa 12571063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 574553 - 574687
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||||| ||||| |||||||| || |||| ||||||||||| ||| | || ||||||||||||||| |    
T  574553 gaacacaacaacattctgatgttcagaatgttcacccaaattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 574652  T
Q  222 aacagatacaagagcccaataactctataagtaga 256  Q
    ||| | || | ||||||||  ||||||||| ||||    
T  574653 aacggctatatgagcccaaagactctataaataga 574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 307
Target Start/End: Original strand, 21109539 - 21109726
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    |||||||||||||  |||||||| |||||| ||| ||| ||||||| ||||||||   ||||| ||||| ||||||||  | || |||||||| |||| |    
T  21109539 aagaacacaacaacgttctgatggtcagaatgtttacctagattttcaagtaaaagtcagtgg-gcccaagacacatgacataacaccattggccaccct 21109637  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaaacaa 307  Q
    ||||| | || | |||||||| |||| ||||| ||||  | |||||| || |||||||||||||||||||||||| ||||| |||||||    
T  21109638 ccaacggctatatgagcccaaaaactttataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaaggaaaacaa 21109726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 303
Target Start/End: Complemental strand, 69883 - 69698
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaa-tctagtggagcccaggacacatggaacaagaccattggtcacct 218  Q
    ||||||| ||||| ||||||||| |||||| ||| | ||||| ||| || ||||| | | | |||||||| ||||| ||| | || ||||||||||||||    
T  69883 aagaacataacaacattctgatggtcagaatgtttatccagaatttcaattaaaagttttgcggagcccaagacacgtggcataacaccattggtcacct 69784  T
Q  219 tccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    | |||| | || | |||||||| |||||||||| ||||  | |||||  || ||||||||||||||||||||| || |||||||||    
T  69783 tacaacggctatatgagcccaaaaactctataaatagagatcaaaggatcaacattacttgcaccattgcaaatcatacaagaaaa 69698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 19342539 - 19342611
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  19342539 atgaacccagatgaagatcatgatgaacacaacaacattctgaagtattctcaagaacacaacaacattctga 19342611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 22902334 - 22902406
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||||||||| | |||| || ||||||| |||||||| ||||||||||||||||||||||||    
T  22902334 atgaacccagatgaagatcatgatgaacacatcaacattctgaagtattctcaagaacacaacaatattctga 22902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 38930243 - 38930193
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  38930243 cattcatacatgatgaacccaaatgaagatcatcatgaacacaacaacatt 38930193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 3605696 - 3605594
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||| ||||| |||||| ||||||||||||||| |||||||| || ||||  |||||||||| ||| | || |||||| | |||||| |    
T  3605696 gaacacaacaacattatgatggtcagaatgttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattaggcaccttac 3605597  T
Q  222 aac 224  Q
    |||    
T  3605596 aac 3605594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 16902309 - 16902263
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  16902309 catgatgaacccagatgaagatcatcatgaacgcaacaacattatga 16902263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 16995700 - 16995654
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacattatga 110  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  16995700 catgatgaacccagatgaagatcatcatgaacgcaacaacattatga 16995654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 38957590 - 38957541
Alignment:
Q  57 attcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  38957590 attcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 38957541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 45014951 - 45014999
Alignment:
Q  58 ttcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  45014951 ttcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 45014999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 22902384 - 22902436
Alignment:
Q  88 tcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||| |||||| ||| |||||||| |||||||||||||||| |||||||    
T  22902384 tcaagaacacaacaatattctgaagtattctcaagaacacaacaacattctga 22902436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 2998430 - 2998387
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  2998430 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 2998387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 9502493 - 9502450
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  9502493 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 9502450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 9513859 - 9513816
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  9513859 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 9513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 22687444 - 22687261
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatc-tagtggagcccaggacacatggaacaagaccattggtcaccttc 220  Q
    |||| |||||| ||||||||| ||| || ||||||||| ||||| ||||||||   | ||||  |||||||||  ||| | || ||||| |||||||||     
T  22687444 gaactcaacaacattctgatgttcaaaatgttcacccaaattttcaagtaaaaagattgtgggacccaggacatgtggcataacaccatcggtcacctta 22687345  T
Q  221 caacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||| | || | |||||||| |||||||||| ||||  | |||| | |  |||||||||||||| |||| |||| |||||||||    
T  22687344 caacggctatatgagcccaaaaactctataaatagagatcaaagactcggcattacttgcaccactgcatagcatacaagaaaa 22687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 24696318 - 24696275
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  24696318 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 24696275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 45025055 - 45025098
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  45025055 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 45025098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 4458444 - 4458484
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  4458444 tgatgaacccagatgaagatcatcatgaacacaacaacatt 4458484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 4468069 - 4468109
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  4468069 tgatgaacccagatgaagatcatcatgaacacaacaacatt 4468109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 5346718 - 5346678
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  5346718 tgatgaacccagatgaagatcatcatgaacacaacaacatt 5346678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 18651467 - 18651507
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  18651467 tgatgaacccagatgaagatcatcatgaacacaacaacatt 18651507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 18663585 - 18663625
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  18663585 tgatgaacccagatgaagatcatcatgaacacaacaacatt 18663625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 40408845 - 40408797
Alignment:
Q  92 gaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||| |||||||||| |||||||| || ||||||||||||| |||||||    
T  40408845 gaacacaacaacattttgaagtattctgaagaacacaacaacattctga 40408797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 44638783 - 44638751
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcat 88  Q
    ||||||||||||||||||||| |||||||||||    
T  44638783 cattcatacatgatgaacccagatgaagatcat 44638751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 127 - 294
Target Start/End: Original strand, 1196 - 1363
Alignment:
Q  127 caacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacag 226  Q
    |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || ||||||| ||||||| |||| |    
T  1196 caacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgatcaccttacaacgg 1295  T
Q  227 atacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
     || | |||||||| |||||||||| ||||  | |||||| || ||||||||||||||||||||||||    
T  1296 ctatatgagcccaaaaactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagca 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 123 - 294
Target Start/End: Original strand, 7716 - 7887
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcca 222  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||| ||||||||  | ||||  |||||||||||||| | || ||||||||||||||| ||    
T  7716 aacacaacaacattctgatggtcagaatgttcatccagattttaaagtaaaagtttgtgggacccaggacacatggcataacaccattggtcaccttaca 7815  T
Q  223 acagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca 294  Q
    |||| || | |||||||| |||||||||| ||||  | ||||||  | ||||||||||||||||||||||||    
T  7816 acagctatatgagcccaaaaactctataaatagagatcaaaggcttagcattacttgcaccattgcaaagca 7887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 114314 - 114132
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| ||| || ||||||| ||||||| |||||||| || |||| ||||||||||| ||  | || ||||||| ||||||| |    
T  114314 gaacacaacaacattctgatgttcaaaatgttcacctagattttcaagtaaaagcttgtggggcccaggacacgtgacataacaccattgatcaccttac 114215  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | |||||||| |||||||||| ||||  | |||||| |||||||||||||||||||| |||||| |||||||||    
T  114214 aacggctatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgaaaagcatacaagaaaa 114132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 146979 - 147161
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| ||||||||| |||||| ||||||| ||||||| |||||||| || ||||  |||||||||| ||| | || ||||||||||| |||      
T  146979 gaacacaacaacattctgatggtcagaatgttcacctagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattggtcatcttat 147078  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | |||||||| |||||||||| ||||  | |||||| || ||||||||||||||||||||| || |||||||||    
T  147079 aacggctatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgcaaatcatacaagaaaa 147161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 233811 - 233768
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  233811 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 233768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 303
Target Start/End: Original strand, 19048 - 19226
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcca 222  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| ||||||| ||| ||| | || ||||||||||||||| ||    
T  19048 aacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggtcacgtggcataacaccattggtcaccttaca 19147  T
Q  223 acagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    || | || | |||||||| |||||  ||| ||||  | |||||| || |||||||||||||||||||||||| |||||||||    
T  19148 acggctatatgagcccaa-aactc--taaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 292
Target Start/End: Original strand, 23450 - 23620
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    ||||||||||| |||||| || |||||| ||||||||||||||| |||||||| |  |||||||| ||||||| ||| | || ||||||||||||||| |    
T  23450 gaacacaacaacattctggtgttcagaatgttcacccagattttcaagtaaaagcatgtggagccaaggacacgtggcataacaccattggtcaccttac 23549  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaag 292  Q
    ||| | || | ||||| ||  ||||||||| ||||  | |||||| || ||||||||||||||||||||||    
T  23550 aacggctatatgagccgaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaag 23620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 19828007 - 19827825
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcc 221  Q
    |||| |||||| ||||||||| |||||| ||| ||||||||||| |||||||| || |||| ||||||||||| ||| | || |||| |||||||||| |    
T  19828007 gaactcaacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccactggtcaccttac 19827908  T
Q  222 aacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||| | || | ||||||||  ||||||||| ||||  | |||||| || |||||||  ||||||||||||||| |||||||||    
T  19827907 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattactcacaccattgcaaagcatacaagaaaa 19827825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 120 - 303
Target Start/End: Complemental strand, 10508461 - 10508277
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacctt 219  Q
    ||||||||||||| ||||||||| | | || ||||||||||||||| ||||| ||  | |||||||||||||||||||| | || |||| |||||||| |    
T  10508461 aagaacacaacaacattctgatggtgaaaatgttcacccagattttcaagtataagtttgtggagcccaggacacatggcataacaccaatggtcaccct 10508362  T
Q  220 ccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
     |||| | || | |||| ||| |||||||||| ||||  | ||||||  | |||||||||||| ||||||||||| |||||||||    
T  10508361 acaacggctatatgagctcaaaaactctataaatagagatcaaaggcttagcattacttgcactattgcaaagcatacaagaaaa 10508277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 20744833 - 20744704
Alignment:
Q  127 caacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacag 226  Q
    |||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| | ||||||||||||| | || |||||||| |||| | |||| |    
T  20744833 caacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacatggcataacaccattggacaccctacaacgg 20744734  T
Q  227 atacaagagcccaataactctataagtaga 256  Q
     || | ||||||||  ||||||||| ||||    
T  20744733 ctatatgagcccaaagactctataaataga 20744704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 20492263 - 20492313
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  20492263 cattcatacatgatgaacccagatgaagatcatcaagaacacaacaacatt 20492313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 12376840 - 12376941
Alignment:
Q  123 aacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttcca 222  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||| ||||||||  | |||| ||||||||||  ||| | || ||||||||||||||| ||    
T  12376840 aacacaacaacattctgatggtcagaatgttcatccagattttaaagtaaaaggttgtggggcccaggacatgtggcataacaccattggtcaccttaca 12376939  T
Q  223 ac 224  Q
    ||    
T  12376940 ac 12376941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 17734363 - 17734432
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattc 137  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||||||||||||| ||||    
T  17734363 atgaacccagatgaagatcatgatgaacacaacaacattttgaagtattctcaagaacacaacaacattc 17734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 19035632 - 19035701
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattc 137  Q
    ||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||||||||||||| ||||    
T  19035632 atgaacccagatgaagatcatgatgaacacaacaacattttgaagtattctcaagaacacaacaacattc 19035701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 256
Target Start/End: Complemental strand, 10012050 - 10011856
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt--atcctcaagaacacaacaatattctgatgatcagaaggttcacccag 160  Q
    |||||||||||||| ||||||||||||| |||| |||||||||| ||| ||  |||||   ||||||||||| ||||||||| ||| || |||  |||||    
T  10012050 acatgatgaacccagatgaagatcatcatgaacacaacaacattctgatgttcatcct-gggaacacaacaacattctgatgttcataatgtttgcccag 10011952  T
Q  161 attttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtaga 256  Q
    | ||| |||| ||| || ||||  |||||||||||||| |  | |||||||| |||| | |||| | || | ||||||||  ||||||||| ||||    
T  10011951 aatttcaagttaaagcttgtgggacccaggacacatggcattacaccattggacaccctacaacggctatatgagcccaaagactctataaataga 10011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 4023960 - 4023910
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  4023960 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 4023910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 4371594 - 4371644
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  4371594 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 4371644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 25433074 - 25433124
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  25433074 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 25433124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 11459536 - 11459600
Alignment:
Q  243 actctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagcaacaagaaaaacaa 307  Q
    ||||||||| |||||||| ||| |  | ||||||||||||||||| |||||||||||||||||||    
T  11459536 actctataaatagaagtggaagacttaacattacttgcaccattgaaaagcaacaagaaaaacaa 11459600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 20293321 - 20293392
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggaca 193  Q
    ||||| ||||| |||| |||| |||||| ||||||||||||||| |||||||| || |||| ||||||||||    
T  20293321 gaacaaaacaacattccgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggaca 20293392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 2489055 - 2489005
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  2489055 cattcatatatgatgaacccagatgaagatcatcatgaacacaacaacatt 2489005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 1685073 - 1685030
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  1685073 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 1685030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 4381342 - 4381385
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  4381342 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 4381385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 4782439 - 4782396
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  4782439 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 4782396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 5655448 - 5655405
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  5655448 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 5655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 6432974 - 6433017
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  6432974 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 6433017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 16335266 - 16335223
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  16335266 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 16335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 11807 - 11765
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  11807 catgatgaacccagatgaagatcatcatgaacacaacaacatt 11765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 51978541 - 51978475
Alignment:
Q  151 gttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcacc 217  Q
    ||||||||||||||| |||||||| || |||| ||||||||||| ||| | || |||||||| ||||    
T  51978541 gttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataataccattggacacc 51978475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 49387191 - 49387146
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagt 113  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||||||    
T  49387191 atgaacccagatgaagatcatgaagaacacaacaacattctgaagt 49387146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 11837 - 11805
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcat 88  Q
    ||||||||||||||||||||| |||||||||||    
T  11837 cattcatacatgatgaacccagatgaagatcat 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 8973095 - 8973135
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  8973095 tgatgaacccagatgaagatcatcatgaacacaacaacatt 8973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 8983650 - 8983690
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  8983650 tgatgaacccagatgaagatcatcatgaacacaacaacatt 8983690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 9537384 - 9537424
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  9537384 tgatgaacccagatgaagatcatcatgaacacaacaacatt 9537424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 9547710 - 9547750
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  9547710 tgatgaacccagatgaagatcatcatgaacacaacaacatt 9547750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 303
Target Start/End: Original strand, 216925 - 217115
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggt 213  Q
    ||||| ||||||||||||| |||||| || |||||| | | ||||||| |||  |||||||  | |||| ||||| ||||| ||| | || |||||||||    
T  216925 atcctgaagaacacaacaacattctggtggtcagaatgcttacccagaatttcgagtaaaagtttgtggggcccaagacacgtggcataacaccattggt 217024  T
Q  214 caccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    |||||| |||| | || | |||||||| |||||||||| || |  | |||||| || |||||||||||||||||||||||| |||||||||    
T  217025 caccttacaacggctatatgagcccaaaaactctataaataaagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaa 217115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 309842 - 309799
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  309842 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 309799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 11567 - 11658
Alignment:
Q  120 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattg 211  Q
    ||||||||||||| ||||||||| ||| || ||||||||| ||||| |||||||| ||||||| ||||||||||| ||| | ||||||||||    
T  11567 aagaacacaacaacattctgatggtcaaaatgttcacccatattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattg 11658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 58872 - 58975
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggt 213  Q
    ||||| ||||||||||||| ||| ||||| |||||| ||||||| || |||| |||||||| | ||||| ||||||||||| ||| | ||||||||||||    
T  58872 atcctgaagaacacaacaacattatgatggtcagaatgttcaccgagtttttcaagtaaaagccagtggggcccaggacacgtggcaaaagaccattggt 58971  T
Q  214 cacc 217  Q
    ||||    
T  58972 cacc 58975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 60300 - 60403
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggt 213  Q
    ||||| ||||||||||||| ||| ||||| |||||| ||||||| || |||| |||||||| | ||||| ||||||||||| ||| | ||||||||||||    
T  60300 atcctgaagaacacaacaacattatgatggtcagaatgttcaccgagtttttcaagtaaaagccagtggggcccaggacacgtggcaaaagaccattggt 60399  T
Q  214 cacc 217  Q
    ||||    
T  60400 cacc 60403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 54920 - 55026
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggag---cccaggacacatggaacaagaccatt 210  Q
    ||||| ||||||||||||| ||| | ||| ||| || ||||||| || |||| |||||||| | ||||| |   |||||||||| ||| | |||||||||    
T  54920 atcctgaagaacacaacaacattatcatggtcaaaatgttcaccgagtttttcaagtaaaagccagtggtggggcccaggacacgtggcaaaagaccatt 55019  T
Q  211 ggtcacc 217  Q
    |||||||    
T  55020 ggtcacc 55026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 615 - 545
Alignment:
Q  70 gaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  615 gaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 5994 - 6064
Alignment:
Q  70 gaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  5994 gaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 20151 - 20221
Alignment:
Q  70 gaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  20151 gaacccagatgaagatcatgaagaacacaacaacattctgaagtattctcaagaacacaacaacattctga 20221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 197172 - 197030
Alignment:
Q  114 atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggt 213  Q
    ||||| ||||||||||||| | || |||| | | || ||||||||| ||||| |||||||| |||| || | ||| ||||||||| ||||||||||||||    
T  197172 atcctgaagaacacaacaacactcagatggtgataatgttcacccaaattttcaagtaaaagctagcggggtccatgacacatggcacaagaccattggt 197073  T
Q  214 caccttccaacagatacaagagcccaataactctataagtaga 256  Q
    |||| || ||| | |||| |||||||| || ||||||| ||||    
T  197072 caccctctaacggctacaggagcccaagaattctataaataga 197030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 267206 - 267140
Alignment:
Q  74 ccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    |||||||||| |||| | |||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  267206 ccaaatgaaggtcatgatgaacacaacaacattatgaagtattctcaagaacacaacaacattctga 267140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1468 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1468
Description:

Target: scaffold1468; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 1614 - 1703
Alignment:
Q  122 gaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattg 211  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| |||||||| || |||| | ||||||||| ||| | || |||||||    
T  1614 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacgtggcataacaccattg 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 40409 - 40337
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattctga 140  Q
    ||||||||| ||||| ||||| | |||| |||||||||| |||||||| |||||||||||||| |||||||||    
T  40409 atgaacccatatgaatatcatgatgaacacaacaacattttgaagtattctcaagaacacaaccatattctga 40337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 3351 - 3281
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaatattct 138  Q
    ||||||||||||||||||||| | |||| ||||||||||  ||||||| ||| |||||||||||| |||||    
T  3351 atgaacccaaatgaagatcatgatgaacacaacaacattcggaagtattctctagaacacaacaacattct 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 307
Target Start/End: Complemental strand, 3234 - 3082
Alignment:
Q  156 cccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaagagcccaataactctataagtag 255  Q
    |||||||||| ||||||||  |||||| || |||||||||||| ||| |||| ||||  ||| | |||| | || | ||||| || |||||||||| |||    
T  3234 cccagattttcaagtaaaagttagtggggcacaggacacatggcacacgaccgttggataccctacaacggctatatgagccgaaaaactctataaatag 3135  T
Q  256 aagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaaacaa 307  Q
    |  | |||||| || ||| ||||| | | |||||||||| |||||||||||||    
T  3134 agatcaaaggctcaacatcacttgtagcgttgcaaagcatacaagaaaaacaa 3082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 55670 - 55620
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  55670 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 55620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 16064 - 16114
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  16064 cattcatacatgatgaacccagatgaagatcatcatgaacacaacaacatt 16114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 14243 - 14307
Alignment:
Q  68 atgaacccaaatgaagatcatcaagaacgcaacaacattatgaagtatcctcaagaacacaacaa 132  Q
    ||||||||| ||||||||||| | |||  |||||||||| |||||||| ||||||||||||||||    
T  14243 atgaacccagatgaagatcatgatgaaaacaacaacattttgaagtattctcaagaacacaacaa 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 15674 - 15768
Alignment:
Q  90 aagaacgcaacaacattatgaagt--atcctcaagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtgg 182  Q
    |||||| |||||||||| ||| ||  ||||| ||||| ||||||| ||||||||| | |||| |||||||||||||||  ||||||| |||||||    
T  15674 aagaacacaacaacattctgatgttcatcctgaagaagacaacaacattctgatggttagaatgttcacccagattttctagtaaaagctagtgg 15768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 50187 - 50088
Alignment:
Q  205 accattggtcaccttccaacagatacaagagcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaa 303  Q
    ||||||||||||||| |||| | || | ||||||||  ||||||||| ||||  | |||||| ||  ||||||||||||||||||||||| |||||||||    
T  50187 accattggtcaccttacaacggctatatgagcccaaagactctataaatagagatcaaaggctcagtattacttgcaccattgcaaagcatacaagaaaa 50088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 92703 - 92653
Alignment:
Q  56 cattcatacatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  92703 cattcatacatgatgaacccagatgaagatcatcatgaacataacaacatt 92653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 19187 - 19144
Alignment:
Q  63 acatgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||    
T  19187 acatgatgaacccagatgaagatcatcatgaacacaacaacatt 19144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 20979 - 20937
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  20979 catgatgaacccagatgaagatcatcatgaacacaacaacatt 20937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 307
Target Start/End: Complemental strand, 28553 - 28379
Alignment:
Q  134 attctgatgatcagaaggttcacccagattttgaagtaaaatctagtggagcccaggacacatggaacaagaccattggtcaccttccaacagatacaag 233  Q
    ||||||||| |||||| |||   ||||||||| ||||||||   ||||| ||| ||||||| ||| | |  | ||||||||||| |||||  | || | |    
T  28553 attctgatggtcagaatgttataccagattttcaagtaaaactcagtggggcctaggacacgtggcatatcatcattggtcaccctccaatggctatatg 28454  T
Q  234 agcccaataactctataagtagaagtgaaaggcacatcattacttgcaccattgcaaagca-acaagaaaaacaa 307  Q
    ||| ||| |||| ||||| ||||  | |||||| || |||||| ||||||||||||||||| | |||||||||||    
T  28453 agctcaaaaactgtataaatagatatcaaaggctcaacattacctgcaccattgcaaagcatataagaaaaacaa 28379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 28618 - 28567
Alignment:
Q  36 aacctagaaactcatacatacattcatacatgatgaacccaaatgaagatcat 88  Q
    |||| |||||||||| | |||||||||| |||||||||||| |||||||||||    
T  28618 aacccagaaactcat-cttacattcataaatgatgaacccagatgaagatcat 28567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 17215 - 17173
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  17215 catgatgaacccagatgaagatcatcatgaacacaacaacatt 17173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 74551 - 74509
Alignment:
Q  64 catgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||    
T  74551 catgatgaacccagatgaagatcatcatgaacacaacaacatt 74509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 7662 - 7622
Alignment:
Q  66 tgatgaacccaaatgaagatcatcaagaacgcaacaacatt 106  Q
    ||||||||||| ||||||||||||| |||| ||||||||||    
T  7662 tgatgaacccagatgaagatcatcatgaacacaacaacatt 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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