View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1199_low_66 (Length: 446)

Name: NF1199_low_66
Description: NF1199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1199_low_66
NF1199_low_66
[»] chr5 (28 HSPs)
chr5 (30-177)||(42407266-42407413)
chr5 (201-323)||(42407869-42407991)
chr5 (315-422)||(42408626-42408733)
chr5 (384-426)||(29816627-29816669)
chr5 (385-426)||(13606993-13607034)
chr5 (385-426)||(28411921-28411962)
chr5 (385-426)||(42576255-42576296)
chr5 (386-426)||(4496629-4496669)
chr5 (386-426)||(12492381-12492421)
chr5 (386-426)||(14665957-14665997)
chr5 (386-426)||(26884686-26884726)
chr5 (386-426)||(28976856-28976896)
chr5 (387-426)||(408492-408531)
chr5 (388-423)||(2645238-2645273)
chr5 (387-426)||(5860079-5860118)
chr5 (386-425)||(29929300-29929339)
chr5 (392-426)||(11002424-11002458)
chr5 (388-426)||(38132581-38132619)
chr5 (389-426)||(3000984-3001021)
chr5 (389-426)||(3302089-3302126)
chr5 (389-426)||(10989085-10989122)
chr5 (389-426)||(16347380-16347417)
chr5 (388-425)||(38684726-38684763)
chr5 (386-426)||(2915493-2915533)
chr5 (386-426)||(10639547-10639587)
chr5 (393-425)||(12006292-12006324)
chr5 (386-426)||(21193649-21193689)
chr5 (386-426)||(30213820-30213860)
[»] chr3 (42 HSPs)
chr3 (385-426)||(49503564-49503605)
chr3 (384-426)||(35701094-35701136)
chr3 (385-426)||(2133608-2133649)
chr3 (389-426)||(30797822-30797859)
chr3 (385-426)||(48532203-48532244)
chr3 (386-426)||(311306-311346)
chr3 (386-426)||(5169077-5169117)
chr3 (386-426)||(12096702-12096742)
chr3 (386-426)||(48508480-48508520)
chr3 (386-426)||(53262386-53262426)
chr3 (388-428)||(54128622-54128662)
chr3 (386-417)||(4660164-4660195)
chr3 (386-425)||(31452958-31452997)
chr3 (385-416)||(34067154-34067185)
chr3 (386-425)||(45374474-45374513)
chr3 (387-426)||(48259949-48259988)
chr3 (387-426)||(52139045-52139084)
chr3 (388-426)||(31454224-31454262)
chr3 (386-424)||(36764932-36764970)
chr3 (388-426)||(37083291-37083329)
chr3 (388-426)||(39512788-39512826)
chr3 (386-424)||(45834597-45834635)
chr3 (386-424)||(47555329-47555367)
chr3 (388-422)||(48328200-48328234)
chr3 (385-426)||(344768-344809)
chr3 (389-426)||(15296152-15296189)
chr3 (389-426)||(27192468-27192505)
chr3 (389-426)||(31566161-31566198)
chr3 (386-419)||(34878119-34878152)
chr3 (386-419)||(41452758-41452791)
chr3 (390-419)||(45468827-45468856)
chr3 (385-426)||(52156080-52156121)
chr3 (386-426)||(22317-22357)
chr3 (386-426)||(237293-237333)
chr3 (386-426)||(7895877-7895917)
chr3 (387-419)||(23610930-23610962)
chr3 (389-425)||(40106620-40106656)
chr3 (387-419)||(43529298-43529330)
chr3 (386-426)||(50249622-50249662)
chr3 (385-417)||(51447713-51447745)
chr3 (386-426)||(52927845-52927885)
chr3 (386-426)||(53519825-53519865)
[»] chr2 (42 HSPs)
chr2 (386-426)||(15775842-15775882)
chr2 (385-426)||(12489798-12489839)
chr2 (385-426)||(25834923-25834964)
chr2 (385-426)||(37520691-37520732)
chr2 (385-426)||(38429654-38429695)
chr2 (386-426)||(227434-227474)
chr2 (386-426)||(3635320-3635360)
chr2 (386-426)||(4807840-4807880)
chr2 (384-424)||(7326155-7326195)
chr2 (386-426)||(8197538-8197578)
chr2 (386-426)||(8202298-8202338)
chr2 (386-426)||(9531597-9531637)
chr2 (389-425)||(11992108-11992144)
chr2 (386-426)||(12734945-12734985)
chr2 (386-426)||(17670713-17670753)
chr2 (386-426)||(30306277-30306317)
chr2 (386-426)||(35643193-35643233)
chr2 (386-426)||(35755242-35755282)
chr2 (386-426)||(38328367-38328407)
chr2 (386-426)||(43573127-43573167)
chr2 (386-426)||(44437718-44437758)
chr2 (387-426)||(10403891-10403930)
chr2 (387-426)||(12520060-12520099)
chr2 (384-419)||(42543487-42543522)
chr2 (385-419)||(1648116-1648150)
chr2 (386-424)||(13188389-13188427)
chr2 (385-419)||(14444921-14444955)
chr2 (388-426)||(28508923-28508961)
chr2 (389-426)||(2073307-2073344)
chr2 (389-426)||(2901960-2901997)
chr2 (389-426)||(12474927-12474964)
chr2 (386-419)||(12882042-12882075)
chr2 (384-417)||(14520945-14520978)
chr2 (386-419)||(15025746-15025779)
chr2 (389-426)||(38452686-38452723)
chr2 (389-426)||(41763043-41763080)
chr2 (386-426)||(451645-451685)
chr2 (386-426)||(2610833-2610873)
chr2 (390-426)||(3243654-3243690)
chr2 (386-426)||(3866317-3866357)
chr2 (386-426)||(8560803-8560843)
chr2 (386-426)||(39029832-39029872)
[»] chr4 (46 HSPs)
chr4 (384-426)||(436474-436516)
chr4 (385-419)||(29283827-29283861)
chr4 (385-426)||(39100532-39100573)
chr4 (385-426)||(52569511-52569552)
chr4 (386-426)||(8327146-8327186)
chr4 (385-425)||(12494909-12494949)
chr4 (386-426)||(21528533-21528573)
chr4 (386-426)||(23294027-23294067)
chr4 (386-426)||(30634103-30634143)
chr4 (386-426)||(44719358-44719398)
chr4 (386-426)||(45209202-45209242)
chr4 (386-426)||(46153953-46153993)
chr4 (386-426)||(50238612-50238652)
chr4 (386-426)||(50238698-50238738)
chr4 (386-426)||(55007991-55008031)
chr4 (386-426)||(56130415-56130455)
chr4 (386-425)||(19154860-19154899)
chr4 (386-421)||(32339809-32339844)
chr4 (386-425)||(48174090-48174129)
chr4 (386-425)||(50869877-50869916)
chr4 (385-419)||(26772533-26772567)
chr4 (388-426)||(32479283-32479321)
chr4 (386-424)||(45204837-45204875)
chr4 (386-424)||(49454476-49454514)
chr4 (389-418)||(813171-813200)
chr4 (386-419)||(6957850-6957883)
chr4 (386-419)||(8286691-8286724)
chr4 (388-425)||(15665347-15665384)
chr4 (388-425)||(22420716-22420753)
chr4 (388-425)||(30662042-30662079)
chr4 (389-426)||(31959814-31959851)
chr4 (386-419)||(31961263-31961296)
chr4 (386-419)||(37488343-37488376)
chr4 (386-419)||(42293262-42293295)
chr4 (386-419)||(43434176-43434209)
chr4 (389-426)||(47372949-47372986)
chr4 (389-426)||(48622543-48622580)
chr4 (389-426)||(49416952-49416989)
chr4 (393-426)||(53517750-53517783)
chr4 (386-422)||(1328611-1328647)
chr4 (386-426)||(19061932-19061972)
chr4 (386-426)||(19969426-19969466)
chr4 (389-425)||(23906297-23906333)
chr4 (386-426)||(28236427-28236467)
chr4 (386-426)||(31459239-31459279)
chr4 (388-416)||(44385079-44385107)
[»] chr1 (37 HSPs)
chr1 (384-426)||(4707216-4707258)
chr1 (385-426)||(41560474-41560515)
chr1 (386-426)||(1210990-1211030)
chr1 (386-426)||(8809498-8809538)
chr1 (386-426)||(25979228-25979268)
chr1 (386-426)||(30202127-30202167)
chr1 (386-426)||(34444601-34444641)
chr1 (386-426)||(36402056-36402096)
chr1 (386-426)||(38758017-38758057)
chr1 (386-426)||(38807668-38807708)
chr1 (386-426)||(43481795-43481835)
chr1 (387-426)||(696515-696554)
chr1 (387-426)||(29577497-29577536)
chr1 (387-426)||(44941774-44941813)
chr1 (386-424)||(2914120-2914158)
chr1 (385-431)||(6757459-6757505)
chr1 (388-426)||(8796454-8796492)
chr1 (386-424)||(15086169-15086207)
chr1 (384-426)||(22090341-22090383)
chr1 (389-427)||(43028808-43028846)
chr1 (385-419)||(44751736-44751770)
chr1 (386-424)||(51602303-51602341)
chr1 (386-435)||(21519160-21519209)
chr1 (389-426)||(29975444-29975481)
chr1 (386-419)||(41017214-41017247)
chr1 (389-426)||(49347393-49347430)
chr1 (389-426)||(50806912-50806949)
chr1 (385-426)||(52901041-52901082)
chr1 (389-426)||(52921325-52921362)
chr1 (384-424)||(4001450-4001490)
chr1 (386-426)||(4029367-4029407)
chr1 (386-426)||(4318842-4318882)
chr1 (386-426)||(28090691-28090731)
chr1 (386-426)||(37311752-37311792)
chr1 (386-426)||(41165527-41165567)
chr1 (385-425)||(48431395-48431435)
chr1 (390-426)||(52561590-52561626)
[»] chr8 (33 HSPs)
chr8 (385-426)||(9842365-9842406)
chr8 (385-426)||(11523719-11523760)
chr8 (385-426)||(36545394-36545435)
chr8 (386-426)||(1064965-1065005)
chr8 (385-417)||(5908900-5908932)
chr8 (386-426)||(14742079-14742119)
chr8 (386-426)||(24837936-24837976)
chr8 (386-426)||(30198263-30198303)
chr8 (386-426)||(32978119-32978159)
chr8 (386-426)||(41031417-41031457)
chr8 (386-426)||(41031523-41031563)
chr8 (387-426)||(1928585-1928624)
chr8 (386-425)||(21425292-21425331)
chr8 (387-426)||(35324018-35324057)
chr8 (387-426)||(39651026-39651065)
chr8 (386-425)||(44047529-44047568)
chr8 (385-419)||(2027782-2027816)
chr8 (384-426)||(15215407-15215449)
chr8 (386-428)||(16008392-16008434)
chr8 (388-426)||(25473402-25473440)
chr8 (389-426)||(4061908-4061945)
chr8 (389-426)||(4213051-4213088)
chr8 (393-426)||(12026025-12026058)
chr8 (387-424)||(16918494-16918531)
chr8 (386-419)||(31716074-31716107)
chr8 (389-426)||(44529470-44529507)
chr8 (389-426)||(45419480-45419517)
chr8 (386-426)||(490580-490620)
chr8 (388-424)||(4558207-4558243)
chr8 (387-419)||(10668495-10668527)
chr8 (386-426)||(16921464-16921504)
chr8 (386-426)||(21121390-21121430)
chr8 (386-426)||(30559943-30559983)
[»] chr7 (51 HSPs)
chr7 (385-426)||(2885718-2885759)
chr7 (385-426)||(11594205-11594246)
chr7 (381-426)||(14593997-14594042)
chr7 (381-426)||(16013520-16013565)
chr7 (387-424)||(31840477-31840514)
chr7 (386-426)||(12841272-12841312)
chr7 (389-425)||(20158671-20158707)
chr7 (386-426)||(27893560-27893600)
chr7 (386-426)||(28208325-28208365)
chr7 (386-426)||(29650629-29650669)
chr7 (386-426)||(31005450-31005490)
chr7 (386-426)||(31682599-31682639)
chr7 (386-426)||(32631809-32631849)
chr7 (385-425)||(36101773-36101813)
chr7 (386-426)||(39906369-39906409)
chr7 (386-426)||(43423988-43424028)
chr7 (386-426)||(43491553-43491593)
chr7 (386-426)||(44855171-44855211)
chr7 (387-426)||(37618190-37618229)
chr7 (383-426)||(43281919-43281962)
chr7 (386-425)||(47413712-47413751)
chr7 (388-426)||(1011291-1011329)
chr7 (388-426)||(21244282-21244320)
chr7 (388-426)||(27649025-27649063)
chr7 (387-425)||(28355412-28355450)
chr7 (387-425)||(29012335-29012373)
chr7 (388-426)||(31869101-31869139)
chr7 (385-419)||(33281138-33281172)
chr7 (388-426)||(47652792-47652830)
chr7 (384-421)||(476025-476062)
chr7 (386-419)||(12966268-12966301)
chr7 (386-419)||(20899423-20899456)
chr7 (385-426)||(28708626-28708667)
chr7 (385-418)||(29312242-29312275)
chr7 (385-418)||(29318791-29318824)
chr7 (386-419)||(33469671-33469704)
chr7 (388-425)||(33650869-33650906)
chr7 (389-426)||(34869665-34869702)
chr7 (386-419)||(35725568-35725601)
chr7 (386-419)||(38900208-38900241)
chr7 (389-426)||(40979928-40979965)
chr7 (385-426)||(42187686-42187727)
chr7 (385-426)||(45836478-45836519)
chr7 (386-426)||(5418319-5418359)
chr7 (386-426)||(6375113-6375153)
chr7 (386-426)||(22349865-22349905)
chr7 (386-418)||(30199964-30199996)
chr7 (390-426)||(34745992-34746028)
chr7 (386-426)||(36869234-36869274)
chr7 (386-426)||(40630679-40630719)
chr7 (384-420)||(44951406-44951442)
[»] chr6 (13 HSPs)
chr6 (385-426)||(12890820-12890861)
chr6 (386-426)||(28085621-28085661)
chr6 (384-422)||(30789069-30789107)
chr6 (383-424)||(1008046-1008087)
chr6 (389-426)||(9707015-9707052)
chr6 (389-426)||(33730210-33730247)
chr6 (389-426)||(34934830-34934867)
chr6 (390-426)||(608406-608442)
chr6 (386-426)||(4245869-4245909)
chr6 (385-425)||(4878293-4878333)
chr6 (386-426)||(5258145-5258185)
chr6 (386-426)||(34143762-34143802)
chr6 (386-426)||(34156378-34156418)
[»] scaffold0168 (1 HSPs)
scaffold0168 (386-426)||(28886-28926)
[»] scaffold0157 (1 HSPs)
scaffold0157 (385-425)||(25528-25568)
[»] scaffold0018 (1 HSPs)
scaffold0018 (386-426)||(31713-31753)
[»] scaffold0024 (1 HSPs)
scaffold0024 (389-426)||(82963-83000)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 42407266 - 42407413
Alignment:
Q  30 gcgatgatgtgaaaaatacattgtctcactgattccttacctaagttaggccctaatgttcgattttccggattgtgcaaagaaatatgtttgcttacat 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42407266 gcgatgatgtgaaaaatacatcgtctcactgattccttacctaagttaggccctaatgttcgattttccggattgtgcaaggaaatatgtttgcttacat 42407365  T
Q  130 tgactgccaagaagaagccaagtaacggtataatcttcaaaaggaaat 177  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  42407366 tgactgccaagaagaagccaagtaactgtataatcttcaaaaagaaat 42407413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 201 - 323
Target Start/End: Original strand, 42407869 - 42407991
Alignment:
Q  201 tttagtattcatccctaaatatgtcagtaaacttttaattttagttactttgacctattgaatagtttattaaggaatacaagtgagaggaagggaggaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42407869 tttagtattcatccctaaatatgtcagtaaacttttaattttagttacttcgacctattgaatagtttattaaggaatacaagtgagaggaagggaggaa 42407968  T
Q  301 cttgataaaggtaatggtttatt 323  Q
    | |||||||||||||||||||||    
T  42407969 cctgataaaggtaatggtttatt 42407991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 42408626 - 42408733
Alignment:
Q  315 tggtttattatatcagaagttttaccgacgagtggatatataagttgaataccttcacgtccgacttatctacaacaacaacaaccaagccttattccac 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  42408626 tggtttattatatcagaagttttaccgacgagtggatatataagttgaataccttcacgtccgacttatctacaacaacaacaatcaagccttatcccac 42408725  T
Q  415 taagtagg 422  Q
    ||||||||    
T  42408726 taagtagg 42408733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 29816669 - 29816627
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  29816669 ctacaacaacaacaaccaagccttatcccactaagtggggtcg 29816627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 13606993 - 13607034
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  13606993 tacaacaacaacaaccaagccttatcccactaagtggggtcg 13607034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 28411962 - 28411921
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  28411962 tacaacaacaacaaccaagccttatcccactaagtggggtcg 28411921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 42576296 - 42576255
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  42576296 tacaacaacaacaaccaagccttatcccactaagtcgggtcg 42576255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 4496669 - 4496629
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  4496669 acaacaacaacaaccaagccttatcccactaagtggggtcg 4496629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 12492381 - 12492421
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  12492381 acaacaacaacaaccaagccttatcccactaagtggggtcg 12492421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 14665997 - 14665957
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  14665997 acaacaacaacaaccaagccttatcccactaagtggggtcg 14665957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 26884686 - 26884726
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  26884686 acaacaacaacaatcaagccttattccactaagtggggtcg 26884726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 28976856 - 28976896
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  28976856 acaacaacaacaaccaagccttatcccactaagtggggtcg 28976896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 408492 - 408531
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  408492 caacaacaacaaccaagccttatcccactaagtggggtcg 408531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 423
Target Start/End: Complemental strand, 2645273 - 2645238
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtaggg 423  Q
    |||||||||||||||||||||| |||||||||||||    
T  2645273 aacaacaacaaccaagccttatcccactaagtaggg 2645238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 5860118 - 5860079
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  5860118 caacaacaacaatcaagccttatcccactaagtagggtcg 5860079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Complemental strand, 29929339 - 29929300
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  29929339 acaacaacaacaaccaagccttatcccactaagtggggtc 29929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 11002424 - 11002458
Alignment:
Q  392 acaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||||||||||||||    
T  11002424 acaacaaccaagccttatcccactaagtagggtcg 11002458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 38132619 - 38132581
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  38132619 aacaacaacaaccaagccttatcccactaagtggggtcg 38132581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 3001021 - 3000984
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  3001021 acaacaacaaccaagccttatcccactaagtggggtcg 3000984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 3302126 - 3302089
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  3302126 acaacaacaaccaagccttatcccactaagtggggtcg 3302089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 10989085 - 10989122
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  10989085 acaacaacaaccaagccttatcccactaagtggggtcg 10989122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 16347380 - 16347417
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  16347380 acaacaacaaccaagtcttatcccactaagtagggtcg 16347417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 38684763 - 38684726
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  38684763 aacaacaacaaccaagctttattccactaagtggggtc 38684726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 2915493 - 2915533
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||| ||||||||||||| ||||||||| ||||||    
T  2915493 acaacaacaataaccaagccttatcccactaagtggggtcg 2915533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 10639587 - 10639547
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| |||| |||| ||||||    
T  10639587 acaacaacaacaaccaagccttatcccacaaagtggggtcg 10639547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 12006292 - 12006324
Alignment:
Q  393 caacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||||| |||||    
T  12006292 caacaaccaagccttattccactaagtggggtc 12006324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 21193649 - 21193689
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||| |||||||||||||||||||| || ||||||    
T  21193649 acaacaacaataaccaagccttattccactacgtggggtcg 21193689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 30213860 - 30213820
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  30213860 acaacaaaaacaaccaagccttatcccactaagtggggtcg 30213820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 49503564 - 49503605
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  49503564 tacaacaacaacaaccaagccttatcccactaagtagggtcg 49503605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 35701136 - 35701094
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  35701136 ctacaacaacaacaaccaagccttatcccactaagtggggtcg 35701094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 2133608 - 2133649
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  2133608 tacaacaacaacaaccaagccttatcccactaagtggggtcg 2133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 30797822 - 30797859
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30797822 acaacaacaaccaagccttattccactaagtggggtcg 30797859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 48532244 - 48532203
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  48532244 tacaacaacaacaaccaagccttatcccactaagtggggtcg 48532203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 311306 - 311346
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  311306 acaacaacaacaaccaagccttatcccactaagtggggtcg 311346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 5169117 - 5169077
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  5169117 acaacaacaacaaccaagccttatcccactaagtggggtcg 5169077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 12096702 - 12096742
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  12096702 acaacaacaacaaccaagccttatcccactaagtggggtcg 12096742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 48508520 - 48508480
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  48508520 acaacaacaacaaccaagccttatcccactaagtggggtcg 48508480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 53262426 - 53262386
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  53262426 acaacaacaacaaccaagccttatcccactaagtggggtcg 53262386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 54128662 - 54128622
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcgcc 428  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  54128662 aacaacaacaaccaagccttatcccactaagtggggtcgcc 54128622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 417
Target Start/End: Original strand, 4660164 - 4660195
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaa 417  Q
    ||||||||||||||||||||||||||||||||    
T  4660164 acaacaacaacaaccaagccttattccactaa 4660195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 31452958 - 31452997
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  31452958 acaaaaacaacaaccaagccttattccactaagtggggtc 31452997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 416
Target Start/End: Complemental strand, 34067185 - 34067154
Alignment:
Q  385 tacaacaacaacaaccaagccttattccacta 416  Q
    ||||||||||||||||||||||||||||||||    
T  34067185 tacaacaacaacaaccaagccttattccacta 34067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 45374474 - 45374513
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  45374474 acaacaacaacaaccaagccttatcccactaagtggggtc 45374513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 48259988 - 48259949
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  48259988 caacaacaacaaccaagccttatcccactaagtggggtcg 48259949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 52139084 - 52139045
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  52139084 caacaacaacaaccaagccttatcccactaagtggggtcg 52139045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 31454224 - 31454262
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  31454224 aacaacaacaaccaagccttatcccactaagtggggtcg 31454262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 36764970 - 36764932
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  36764970 acaacaacaacaaccaagccttataccactaagtggggt 36764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 37083291 - 37083329
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  37083291 aacaacaacaaccaagccttatcccactaagtggggtcg 37083329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 39512826 - 39512788
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  39512826 aacaacaacaaccaagccttatcccactaagtggggtcg 39512788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 45834597 - 45834635
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  45834597 acaacaacaacaaccaagccttatcccactaagtggggt 45834635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 47555329 - 47555367
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  47555329 acaacaacaacaaccaagccttatcccactaagtggggt 47555367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 48328200 - 48328234
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagg 422  Q
    |||||||||||||||||||||| ||||||||||||    
T  48328200 aacaacaacaaccaagccttatcccactaagtagg 48328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 344768 - 344809
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  344768 tacaacaacaacaaccaagccttatcctactaagttgggtcg 344809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 15296189 - 15296152
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  15296189 acaacaacaaccaagccttatcccactaagtggggtcg 15296152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 27192505 - 27192468
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  27192505 acaacaacaaccaagccttatcccactaagtggggtcg 27192468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 31566161 - 31566198
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  31566161 acaacaacaaccaagccttatcccactaagtggggtcg 31566198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 34878152 - 34878119
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||| |||||||||||||||||||||||||||||    
T  34878152 acaataacaacaaccaagccttattccactaagt 34878119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 41452758 - 41452791
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| ||||||||    
T  41452758 acaacaacaacaaccaagccttattgcactaagt 41452791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 419
Target Start/End: Complemental strand, 45468856 - 45468827
Alignment:
Q  390 caacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||||||||    
T  45468856 caacaacaaccaagccttattccactaagt 45468827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 52156080 - 52156121
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||| |||||||| ||||||||| ||||||    
T  52156080 tacaacaacaacaaccgagccttatcccactaagtggggtcg 52156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 22357 - 22317
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  22357 acaacaacaacaaccaagctttatcccactaagtggggtcg 22317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 237293 - 237333
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  237293 acaacaacaacaaccaagccttatcccattaagtggggtcg 237333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 7895877 - 7895917
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  7895877 acaacaacaacaaccaagccttatcccattaagtggggtcg 7895917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Original strand, 23610930 - 23610962
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||| |||||||||    
T  23610930 caacaacaacaaccaagccttatcccactaagt 23610962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40106620 - 40106656
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  40106620 acaacaacaaccaagccttatcccactaagtggggtc 40106656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Complemental strand, 43529330 - 43529298
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||| |||||||||    
T  43529330 caacaacaacaaccaagccttatcccactaagt 43529298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 50249662 - 50249622
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  50249662 acaacaacaacaaccaagccgtatcccactaagtggggtcg 50249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 51447713 - 51447745
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaa 417  Q
    ||||||||||||||||||||||||| |||||||    
T  51447713 tacaacaacaacaaccaagccttatcccactaa 51447745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 52927845 - 52927885
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||| ||||||||||||||||| ||||||||| ||||||    
T  52927845 acaacatcaacaaccaagccttatcccactaagtggggtcg 52927885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 53519865 - 53519825
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  53519865 acaacaacaacaaccaagccttatctcactaagtggggtcg 53519825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 15775842 - 15775882
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15775842 acaacaacaacaaccaagccttattccactaagtggggtcg 15775882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 12489798 - 12489839
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  12489798 tacaacaacaacaaccaagccttatcccactaagtggggtcg 12489839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 25834964 - 25834923
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  25834964 tacaacaacaacaaccaagccttatcccactaagtggggtcg 25834923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 37520732 - 37520691
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  37520732 tacaacaacaacaaccaagccttatcccactaagtggggtcg 37520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 38429695 - 38429654
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  38429695 tacaacaacaacaaccaagccttatcccactaagtggggtcg 38429654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 227474 - 227434
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  227474 acaacaacaacaaccaagccttatcccactaagtggggtcg 227434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 3635320 - 3635360
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  3635320 acaacaacaacaaccaagccttatcccactaagtggggtcg 3635360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 4807880 - 4807840
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  4807880 acaacaacaacaaccaagccttatcccactaagtggggtcg 4807840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 7326155 - 7326195
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  7326155 ctacaacaacaacaaccaagccttatcccactaagtggggt 7326195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 8197538 - 8197578
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  8197538 acaacaacaacaaccaagcattatcccactaagtagggtcg 8197578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 8202298 - 8202338
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  8202298 acaacaacaacaaccaagcattatcccactaagtagggtcg 8202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 9531597 - 9531637
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  9531597 acaacaacaacaaccaagccttatcccactaagtggggtcg 9531637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 11992108 - 11992144
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11992108 acaacaacaaccaagccttattccactaagtggggtc 11992144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 12734985 - 12734945
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  12734985 acaacaacaacaaccaagccttatcccactaagtggggtcg 12734945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 17670753 - 17670713
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  17670753 acaacaacaacaaccaagccttatcccactaagtggggtcg 17670713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 30306317 - 30306277
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30306317 acaacaacaacaaccaagccttatcccactaagtggggtcg 30306277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 35643233 - 35643193
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  35643233 acaacaacaacaaccaagccttatcccactaagtggggtcg 35643193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 35755242 - 35755282
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  35755242 acaagaacaacaaccaagccttatcccactaagtagggtcg 35755282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 38328367 - 38328407
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  38328367 acaacaacaacaaccaagccttatcccactaagtggggtcg 38328407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 43573127 - 43573167
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  43573127 acaacaacaacaaccaagccttatcccactaagtggggtcg 43573167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 44437718 - 44437758
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  44437718 acaacaacaacaaccaagccttatcccactaagtggggtcg 44437758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 10403891 - 10403930
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  10403891 caacaacaacaaccaagccttatcccactaagtggggtcg 10403930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 12520060 - 12520099
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  12520060 caacaacaacaaccaagccttatcccactaagtggggtcg 12520099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 419
Target Start/End: Complemental strand, 42543522 - 42543487
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||||| |||||||||    
T  42543522 ctacaacaacaacaaccaagccttatcccactaagt 42543487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 1648150 - 1648116
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  1648150 tacaacaacaacaaccaagccttatcccactaagt 1648116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 13188427 - 13188389
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  13188427 acaacaacaacaaccaagccttatcccactaagtggggt 13188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 14444955 - 14444921
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  14444955 tacaacaacaacaaccaagccttatcccactaagt 14444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 28508961 - 28508923
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  28508961 aacaacaacaaccaagccttatcccactaagtggggtcg 28508923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 2073307 - 2073344
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  2073307 acaacaacaaccaagccttatcccactaagtggggtcg 2073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 2901960 - 2901997
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  2901960 acaacaacaaccaagcctttttccactaagtggggtcg 2901997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 12474927 - 12474964
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  12474927 acaacaacaaccaagccttatcccactaagtggggtcg 12474964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 12882042 - 12882075
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  12882042 acaacaacaacaaccaagccttatcccactaagt 12882075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 14520945 - 14520978
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaa 417  Q
    |||||||||||||||||||||||||| |||||||    
T  14520945 ctacaacaacaacaaccaagccttatcccactaa 14520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 15025779 - 15025746
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  15025779 acaacaacaacaaccaagccttatcccactaagt 15025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 38452686 - 38452723
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  38452686 acaacaacaaccaagccttatcccactaagtggggtcg 38452723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 41763043 - 41763080
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcg 41763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 451645 - 451685
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  451645 acaacaacaacaaccaagccttgtcccactaagtggggtcg 451685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 2610873 - 2610833
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  2610873 acaacaacaacaaccaagccttatctcactaagtggggtcg 2610833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 3243654 - 3243690
Alignment:
Q  390 caacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  3243654 caacaacaaccaagccttatcccactaagtggggtcg 3243690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 3866357 - 3866317
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| | ||||||| ||||||    
T  3866357 acaacaacaacaaccaagccttatcctactaagtggggtcg 3866317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 8560803 - 8560843
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  8560803 acaacaacaacaaccaagtcttatcccactaagttgggtcg 8560843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 39029872 - 39029832
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  39029872 acaagaacaacaaccaagccttatcccactaagtggggtcg 39029832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 436516 - 436474
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  436516 ctacaacaacaacaaccaagccttatcccactaagtggggtcg 436474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 29283827 - 29283861
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||||||||||||||    
T  29283827 tacaacaacaacaaccaagccttattccactaagt 29283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 39100532 - 39100573
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  39100532 tacaacaacaacaaccaagccttatcccactaagtggggtcg 39100573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 52569511 - 52569552
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  52569511 tacaacaacaacaaccaagccttatcccactaagtggggtcg 52569552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 8327186 - 8327146
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  8327186 acaacaacaacaaccaagccttatcccactaagtggggtcg 8327146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 12494949 - 12494909
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  12494949 tacaacaacaacaaccaagccttatcccactaagtggggtc 12494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 21528573 - 21528533
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  21528573 acaacaacaacaaccaagccttatcccactaagtggggtcg 21528533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 23294067 - 23294027
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  23294067 acaacaacaacaaccacgccttatcccactaagtagggtcg 23294027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 30634103 - 30634143
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30634103 acaacaacaacaaccaagccttatcccactaagtggggtcg 30634143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 44719358 - 44719398
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  44719358 acaacaacaacaaccaagtcttatcccactaagtagggtcg 44719398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 45209202 - 45209242
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  45209202 acaacaacaacaaccaagccttatcccactaagtggggtcg 45209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 46153993 - 46153953
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  46153993 acaacaacaacaaccaagccttatcccactaagtggggtcg 46153953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 50238612 - 50238652
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  50238612 acaacaacaacaaccaagccttatcccactaagtggggtcg 50238652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 50238698 - 50238738
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  50238698 acaacaacaacaaccaagccttatcccactaagtggggtcg 50238738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 55008031 - 55007991
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  55008031 acaacaacaacaaccaagccttatcccactaagtggggtcg 55007991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 56130455 - 56130415
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  56130455 acaacaacaacaaccaagccttatcccactaagtggggtcg 56130415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 19154860 - 19154899
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  19154860 acaacaacaacaaccaagccttatcccactaagtggggtc 19154899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 421
Target Start/End: Complemental strand, 32339844 - 32339809
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtag 421  Q
    |||||||||||||||||||||||| |||||||||||    
T  32339844 acaacaacaacaaccaagccttatcccactaagtag 32339809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 48174090 - 48174129
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  48174090 acaacaacaacaaccaagccttatcccactaagtggggtc 48174129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 50869877 - 50869916
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  50869877 acaacaacaacaaccaagccttatcccactaagtggggtc 50869916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 26772533 - 26772567
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  26772533 tacaacaacaacaaccaagccttatcccactaagt 26772567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 32479321 - 32479283
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  32479321 aacaacaacaaccaagcctttttccactaagtggggtcg 32479283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 45204837 - 45204875
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  45204837 acaacaacaacaaccaagccttatcccactaagttgggt 45204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 49454476 - 49454514
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  49454476 acaacaacaacaaccaagccttatcccactaagtggggt 49454514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 418
Target Start/End: Complemental strand, 813200 - 813171
Alignment:
Q  389 acaacaacaaccaagccttattccactaag 418  Q
    ||||||||||||||||||||||||||||||    
T  813200 acaacaacaaccaagccttattccactaag 813171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 6957883 - 6957850
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  6957883 acaacaacaacaaccaagccttatcccactaagt 6957850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 8286724 - 8286691
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  8286724 acaacaacaacaaccaagccttatcccactaagt 8286691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 15665384 - 15665347
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  15665384 aacaacaacaaccaagccttatcccactaagtggggtc 15665347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 22420716 - 22420753
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  22420716 aacaacaacaaccaagccttatcccactaagtggggtc 22420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 30662042 - 30662079
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  30662042 aacaacaacaaccaagtcttatcccactaagtagggtc 30662079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 31959814 - 31959851
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcg 31959851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 31961263 - 31961296
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  31961263 acaacaacaacaaccaagccttatcccactaagt 31961296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 37488376 - 37488343
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  37488376 acaacaacaacaaccaagccttatcccactaagt 37488343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 42293262 - 42293295
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||| |||||||||||||||||    
T  42293262 acaacaacaacaaccaggccttattccactaagt 42293295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 43434209 - 43434176
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  43434209 acaacaacaacaaccaagccttatcccactaagt 43434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 47372986 - 47372949
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  47372986 acaacaacaatcaagccttatcccactaagtagggtcg 47372949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 48622543 - 48622580
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  48622543 acaacaacaaccaagccttatcccactaagtggggtcg 48622580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 49416989 - 49416952
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  49416989 acaacaacaaccaagccttatcccactaagtggggtcg 49416952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 53517783 - 53517750
Alignment:
Q  393 caacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||| ||||||||||||||||||||||    
T  53517783 caacaaccaagtcttattccactaagtagggtcg 53517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 1328611 - 1328647
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagg 422  Q
    |||||||||||||||||||||||| |||||| |||||    
T  1328611 acaacaacaacaaccaagccttatcccactaggtagg 1328647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 19061932 - 19061972
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| |||||| || ||||||    
T  19061932 acaacaacaacaaccaagccttatcccactaggtggggtcg 19061972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 19969466 - 19969426
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||| |||||||| ||||||||| ||||||    
T  19969466 acaacaacaacaaccgagccttatcccactaagtggggtcg 19969426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 23906297 - 23906333
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  23906297 acaacaacaaccaagccttatcccactaagtggggtc 23906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 28236467 - 28236427
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  28236467 acaacaacaacaaccaagtcttatcccactaagtggggtcg 28236427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 31459279 - 31459239
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  31459279 acaacgacaacaaccaagccttatcccactaagtggggtcg 31459239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 416
Target Start/End: Complemental strand, 44385107 - 44385079
Alignment:
Q  388 aacaacaacaaccaagccttattccacta 416  Q
    |||||||||||||||||||||||||||||    
T  44385107 aacaacaacaaccaagccttattccacta 44385079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 4707216 - 4707258
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  4707216 ctacaacaacaacaaccaagccttatcccactaagtggggtcg 4707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 41560515 - 41560474
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  41560515 tacaacaacaacaaccaagccttatcccactaagtggggtcg 41560474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 1211030 - 1210990
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  1211030 acaacaacaacaaccaagccttatcccactaagtggggtcg 1210990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 8809498 - 8809538
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  8809498 acaacaacaacaaccaagccttatcccactaagtggggtcg 8809538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 25979228 - 25979268
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  25979228 acaacaacaacaaccaagccttatcccactaagtggggtcg 25979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 30202127 - 30202167
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30202127 acaacaacaacaaccaagccttatcccactaagtggggtcg 30202167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 34444641 - 34444601
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  34444641 acaacaacaacaaccaagccttatcccactaagtggggtcg 34444601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 36402056 - 36402096
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  36402056 acaacaacaacaaccaagccttaatccactaagtggggtcg 36402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 38758017 - 38758057
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  38758017 acaacaacaacaaccaagccttatcccactaagtggggtcg 38758057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 38807668 - 38807708
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  38807668 acaacaacaacaaccaagccttatcccactaagtggggtcg 38807708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 43481795 - 43481835
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  43481795 acaacaacaacaaccaagccttatcccactaagtggggtcg 43481835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 696554 - 696515
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  696554 caacaacaacaaccaagccttatcccactaagtggggtcg 696515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 29577536 - 29577497
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  29577536 caacaacaacaaccaagccttatcccactaagtggggtcg 29577497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 44941774 - 44941813
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  44941774 caacaacaacaaccaagccttatcccactaagtggggtcg 44941813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 2914120 - 2914158
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  2914120 acaacaacaacaaccaagccttatcccactaagtggggt 2914158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 6757505 - 6757459
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcgccaag 431  Q
    |||||||||| |||||||||||||| ||||||||| |||||| ||||    
T  6757505 tacaacaacatcaaccaagccttatcccactaagtggggtcggcaag 6757459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 8796492 - 8796454
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  8796492 aacaacaacaaccaagccttatcccactaagtggggtcg 8796454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 15086207 - 15086169
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  15086207 acaacaacaacaaccaagccttatcccactaagtggggt 15086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 22090383 - 22090341
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||    
T  22090383 ctacaacaacaacaaccaagccttatcccacttagtggggtcg 22090341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 427
Target Start/End: Original strand, 43028808 - 43028846
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcgc 427  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  43028808 acaacaacaaccaagccttatcccactaagtggggtcgc 43028846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 44751770 - 44751736
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  44751770 tacaacaacaacaaccaagccttatcccactaagt 44751736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 51602341 - 51602303
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  51602341 acaacaacaacaaccaagccttatcccactaagtggggt 51602303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 21519209 - 21519160
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcgccaagtata 435  Q
    ||||||||||||||||||| |||| ||||||||| |||||| ||| ||||    
T  21519209 acaacaacaacaaccaagctttatcccactaagtggggtcggcaaatata 21519160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 29975481 - 29975444
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  29975481 acaacaacaaccaagccttatcccactaagtggggtcg 29975444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 41017214 - 41017247
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||| |||||||||||||||    
T  41017214 acaacaacaacaaccaagtcttattccactaagt 41017247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 49347393 - 49347430
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  49347393 acaacaacaaccaagccttatcccactaagtggggtcg 49347430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 50806949 - 50806912
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  50806949 acaacaacaaccaagccttattccactaaatggggtcg 50806912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 52901082 - 52901041
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||| |||||||||||| ||||||||| ||||||    
T  52901082 tacaacaacaaccaccaagccttatcccactaagtggggtcg 52901041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 52921362 - 52921325
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  52921362 acaacaacaaccaagccttatcccactaagtggggtcg 52921325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 4001450 - 4001490
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||||| | ||||||||| ||||    
T  4001450 ctacaacaacaacaaccaagccttttcccactaagtggggt 4001490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 4029407 - 4029367
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  4029407 acaacaacaacaaccaagtcttatcccactaagtggggtcg 4029367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 4318842 - 4318882
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  4318842 acaacaacaacaaccaagccttttcccactaagtggggtcg 4318882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 28090691 - 28090731
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  28090691 acaacaacaacaaccaagtcttatcccactaagtggggtcg 28090731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 37311752 - 37311792
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  37311752 acaacaacaacaaccaagccttttcccactaagtggggtcg 37311792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 41165567 - 41165527
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  41165567 acaacaacaacaaccaagccttttcccactaagtggggtcg 41165527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 48431395 - 48431435
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  48431395 tacaacaacaacaaccaagccttatcctactaagtggggtc 48431435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 52561590 - 52561626
Alignment:
Q  390 caacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcg 52561626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 9842406 - 9842365
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  9842406 tacaacaacaacaaccaagccttatgccactaagtggggtcg 9842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 11523719 - 11523760
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  11523719 tacaacaacaacaaccaagccttatcccactaagtggggtcg 11523760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 36545435 - 36545394
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  36545435 tacaacaacaacaaccaagccttatcccactaagtggggtcg 36545394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 1065005 - 1064965
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  1065005 acaacaacaacaaccaagccttatcccactaagtggggtcg 1064965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 5908932 - 5908900
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaa 417  Q
    |||||||||||||||||||||||||||||||||    
T  5908932 tacaacaacaacaaccaagccttattccactaa 5908900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 14742079 - 14742119
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  14742079 acaacaacaacaaccaagccttatcccactaagtggggtcg 14742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 24837976 - 24837936
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  24837976 acaacaacaacaaccaagccttatcccactaagtggggtcg 24837936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 30198263 - 30198303
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30198263 acaacaacaacaaccaagccttatcccactaagtggggtcg 30198303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 32978159 - 32978119
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  32978159 acaacaacaacaaccaagccttatcccactaagttgggtcg 32978119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 41031417 - 41031457
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  41031417 acaacaacaacaaccaagccttatcccactaagtggggtcg 41031457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 41031523 - 41031563
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  41031523 acaacaacaacaaccaagccttatcccactaagtggggtcg 41031563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 1928585 - 1928624
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  1928585 caacaacaacaaccaagccttatcccactaagtggggtcg 1928624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Complemental strand, 21425331 - 21425292
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  21425331 acaacaacaataaccaagccatattccactaagtagggtc 21425292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 35324057 - 35324018
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  35324057 caacaacaacaaccaagccttatcccactaagtggggtcg 35324018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 39651026 - 39651065
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  39651026 caacaacaacaaccaagccttatcccactaagtggggtcg 39651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 44047529 - 44047568
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  44047529 acaacaacaacaaccaagccttatcccactaagtggggtc 44047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 2027816 - 2027782
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  2027816 tacaacaacaacaaccaagccttatcccactaagt 2027782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 15215407 - 15215449
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||||| | ||||||| ||||||    
T  15215407 ctacaacaacaacaaccaagccttatcctactaagtggggtcg 15215449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 16008392 - 16008434
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcgcc 428  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  16008392 acaacaacaacaaccaagtcttatcccactaagtggggtcgcc 16008434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 25473402 - 25473440
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  25473402 aacaacaacaaccaagccttatcccactaagtggggtcg 25473440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 4061945 - 4061908
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  4061945 acaacaacaaccaagcctttttccactaagtggggtcg 4061908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 4213051 - 4213088
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  4213051 acaacaacaaccaagccttattccattaagtggggtcg 4213088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 12026058 - 12026025
Alignment:
Q  393 caacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||| |||||||||||||||||||||||    
T  12026058 caacaaccaaaccttattccactaagtagggtcg 12026025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 424
Target Start/End: Original strand, 16918494 - 16918531
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggt 424  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  16918494 caacaacaacaaccaagccttatcccactaagtggggt 16918531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 31716107 - 31716074
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  31716107 acaacaacaacaaccaagccttatcccactaagt 31716074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 44529507 - 44529470
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  44529507 acaacaacaaccaagccttatcccactaagtggggtcg 44529470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 45419517 - 45419480
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcg 45419480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 490620 - 490580
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  490620 acaacaacaacaaacaagccttatcccactaagtggggtcg 490580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 424
Target Start/End: Original strand, 4558207 - 4558243
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggt 424  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  4558207 aacaacaacaaccaagccttatcccactaagtggggt 4558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Original strand, 10668495 - 10668527
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||| |||||||||    
T  10668495 caacaacaacaaccaagccttatcccactaagt 10668527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 16921504 - 16921464
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  16921504 acaacaacaacaaccaagctttatcccactaagtacggtcg 16921464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 21121430 - 21121390
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  21121430 acaacaacaacaaccaagccttttcccactaagtggggtcg 21121390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 30559983 - 30559943
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||| | ||||||    
T  30559983 acaacaacaacaaccaagccttatcccactaactggggtcg 30559943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 2885718 - 2885759
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  2885718 tacaacaacaacaaccaagccttatcccactaagtggggtcg 2885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 11594246 - 11594205
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  11594246 tacaacaacaacaaccaagccttatcccactaagtggggtcg 11594205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 14594042 - 14593997
Alignment:
Q  381 tatctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||    
T  14594042 tatcaacaacaacaacaaccaagccttatcccactaagtggggtcg 14593997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 16013565 - 16013520
Alignment:
Q  381 tatctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||    
T  16013565 tatcaacaacaacaacaaccaagccttatcccactaagtggggtcg 16013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 387 - 424
Target Start/End: Complemental strand, 31840514 - 31840477
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggt 424  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31840514 caacaacaacaaccaagccttatcccactaagtagggt 31840477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 12841272 - 12841312
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  12841272 acaacaacaacaaccaagccttatcccactaagtggggtcg 12841312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 20158671 - 20158707
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20158671 acaacaacaaccaagccttatcccactaagtagggtc 20158707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 27893560 - 27893600
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  27893560 acaacaacaacaaccaagccttatcgcactaagtagggtcg 27893600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 28208325 - 28208365
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  28208325 acaacaacaacaaccaagccttatcccactaagtggggtcg 28208365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 29650669 - 29650629
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  29650669 acaacaacaacaaccaagccttatcccactaagtggggtcg 29650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 31005490 - 31005450
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  31005490 acaacaacaacaaccaagccttatcccactaagtggggtcg 31005450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 31682599 - 31682639
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  31682599 acaacaacaacaaccaagccttatcccactaagtggggtcg 31682639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 32631849 - 32631809
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  32631849 acaacaacaacaaccaagccttatcccactaagtggggtcg 32631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 36101773 - 36101813
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  36101773 tacaacaacaacaaccaagccttatcccactaagtggggtc 36101813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 39906369 - 39906409
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  39906369 acaacaacaacaaccaagccttatcccactaagtggggtcg 39906409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 43423988 - 43424028
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  43423988 acaacaacaacaaccaagccttatcccactaagtggggtcg 43424028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 43491593 - 43491553
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  43491593 acaacaacaacaaccaagccttatcccactaagtggggtcg 43491553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 44855171 - 44855211
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  44855171 acaacaacaacaaccaagccttatcccactaagtggggtcg 44855211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 37618229 - 37618190
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  37618229 caacaacaacaaccaagccttatcccactaagtggggtcg 37618190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 426
Target Start/End: Complemental strand, 43281962 - 43281919
Alignment:
Q  383 tctacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||    
T  43281962 tctacaacaacaacaaccaagccttgtcccactaagtggggtcg 43281919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 47413712 - 47413751
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  47413712 acaacaacaacaaccaagccttatcccactaagtggggtc 47413751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 1011329 - 1011291
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  1011329 aacaacaacaaccaagccttatcccactaagtggggtcg 1011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 21244282 - 21244320
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  21244282 aacaacaacaaccaagccttatcccactaagtggggtcg 21244320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 27649063 - 27649025
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  27649063 aacaacaacaaccaagccttatcccactaagtggggtcg 27649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 425
Target Start/End: Complemental strand, 28355450 - 28355412
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  28355450 caacaacaacaaccaagccttatcccactaagtggggtc 28355412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 425
Target Start/End: Original strand, 29012335 - 29012373
Alignment:
Q  387 caacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  29012335 caacaacaacaaccaagtcttatcccactaagtagggtc 29012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 31869101 - 31869139
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  31869101 aacaacaacaaccaagccttatcccactaagtggggtcg 31869139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 33281172 - 33281138
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagt 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  33281172 tacaacaacaacaaccaagccttatcccactaagt 33281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 47652830 - 47652792
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  47652830 aacaacaacaaccaagccttatcccactaagtggggtcg 47652792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 421
Target Start/End: Complemental strand, 476062 - 476025
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtag 421  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  476062 ctacaacaaaaacaaccaagccttatcccactaagtag 476025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 12966301 - 12966268
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  12966301 acaacaacaacaaccaagccttatcccactaagt 12966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 20899456 - 20899423
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  20899456 acaacaacaacaaccaagccttatcccactaagt 20899423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 28708667 - 28708626
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||| |||||||||||||| ||||||||| ||||||    
T  28708667 tacaacaacatcaaccaagccttatcccactaagtggggtcg 28708626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 29312275 - 29312242
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaag 418  Q
    ||||||||||||||||||||||||| ||||||||    
T  29312275 tacaacaacaacaaccaagccttatcccactaag 29312242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 29318791 - 29318824
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaag 418  Q
    ||||||||||||||||||||||||| ||||||||    
T  29318791 tacaacaacaacaaccaagccttatcccactaag 29318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 33469671 - 33469704
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||| |||||||||||||||||||||||    
T  33469671 acaacaacaaaaaccaagccttattccactaagt 33469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 33650869 - 33650906
Alignment:
Q  388 aacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  33650869 aacaacaacaaccaagccttatcccactaagtggggtc 33650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 34869702 - 34869665
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  34869702 acaacaacaaccaagccttatcccactaattagggtcg 34869665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 35725568 - 35725601
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  35725568 acaacaacaacaaccaagccttatcccactaagt 35725601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 38900241 - 38900208
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagt 419  Q
    |||||||||||||||||||||||| |||||||||    
T  38900241 acaacaacaacaaccaagccttatcccactaagt 38900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 40979928 - 40979965
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  40979928 acaacaacaaccaagccttatcccactaagtggggtcg 40979965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 42187727 - 42187686
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||    
T  42187727 tacaacaacaacaacaaagccttatcccactaagtggggtcg 42187686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 45836478 - 45836519
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||| |||||||| ||||||||| ||||||    
T  45836478 tacaacaacaacaaccgagccttatcccactaagtggggtcg 45836519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 5418359 - 5418319
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||| | ||||||    
T  5418359 acaacaacaacaaccaagccttatcccactaaatggggtcg 5418319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 6375153 - 6375113
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  6375153 acaacgacaacaaccaagccttatcccactaagtggggtcg 6375113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 22349905 - 22349865
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  22349905 acaacaacaacaatcaagccttatcccactaagtggggtcg 22349865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 418
Target Start/End: Original strand, 30199964 - 30199996
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaag 418  Q
    |||||||||||||||||||||||| ||||||||    
T  30199964 acaacaacaacaaccaagccttatcccactaag 30199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 426
Target Start/End: Complemental strand, 34746028 - 34745992
Alignment:
Q  390 caacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  34746028 caacaacaaccaagccttatcccactaagtggggtcg 34745992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 36869234 - 36869274
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  36869234 acaacaacaacaaccaagccttatcccattaagtggggtcg 36869274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 40630719 - 40630679
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  40630719 acaacaacaacaaccaagccttttcccactaagtggggtcg 40630679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 44951442 - 44951406
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagta 420  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  44951442 ctacaacaacaacaaccaaaccttataccactaagta 44951406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 12890861 - 12890820
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  12890861 tacaacaacaacaaccaagccttatcccactaagtggggtcg 12890820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 28085661 - 28085621
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  28085661 acaacaacaacaaccaagccttatcccactaagtggggtcg 28085621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 30789069 - 30789107
Alignment:
Q  384 ctacaacaacaacaaccaagccttattccactaagtagg 422  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  30789069 ctacaagaacaacaaccaagccttatcccactaagtagg 30789107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 424
Target Start/End: Original strand, 1008046 - 1008087
Alignment:
Q  383 tctacaacaacaacaaccaagccttattccactaagtagggt 424  Q
    ||||||||||||||||||||||||| | ||||||||| ||||    
T  1008046 tctacaacaacaacaaccaagccttttcccactaagtggggt 1008087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 9707052 - 9707015
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  9707052 acaacaacaaccaagccttatcccactaagtggggtcg 9707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 33730247 - 33730210
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcg 33730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 34934830 - 34934867
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  34934830 acaacaacaaccaagccttatcccactaagtggggtcg 34934867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 426
Target Start/End: Complemental strand, 608442 - 608406
Alignment:
Q  390 caacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  608442 caacaacaaccaagtcttatcccactaagtagggtcg 608406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 4245869 - 4245909
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  4245869 acaacaaaaacaaccaagccttatcccactaagtggggtcg 4245909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 4878293 - 4878333
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    |||||||||||||||||||||||||  |||||||| |||||    
T  4878293 tacaacaacaacaaccaagccttatcacactaagtggggtc 4878333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 5258145 - 5258185
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  5258145 acaacaacaacaaccaagacttatcccactaagtggggtcg 5258185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 34143762 - 34143802
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  34143762 acaacaacaacaaccaagccttatcccaataagtggggtcg 34143802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 34156378 - 34156418
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  34156378 acaacaacaacaaccaagccttatcccaataagtggggtcg 34156418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 28886 - 28926
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  28886 acaacaacaacaaccaagccttatcccactaagtggggtcg 28926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 25528 - 25568
Alignment:
Q  385 tacaacaacaacaaccaagccttattccactaagtagggtc 425  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  25528 tacaacaacaacaaccaagccttatcccactaagtggggtc 25568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 31753 - 31713
Alignment:
Q  386 acaacaacaacaaccaagccttattccactaagtagggtcg 426  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  31753 acaacaacaacaaccaagccttatcccactaagtggggtcg 31713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 83000 - 82963
Alignment:
Q  389 acaacaacaaccaagccttattccactaagtagggtcg 426  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  83000 acaacaacaaccaagccttattccattaagtggggtcg 82963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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