View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12003_low_2 (Length: 260)
Name: NF12003_low_2
Description: NF12003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12003_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 9721749 - 9721503
Alignment:
| Q |
17 |
gataggaccaccattttctgctaaaggagcttcccctaatctcttcaacattgccacattacattatt---------atgtaaccaaaaatcctaagacc |
107 |
Q |
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| T |
9721749 |
gataggacccccattttctgctaaaggagcttcccctaatctcttcaacattgccacattacattattttccactatatgtaaccaaaaatcctaagacc |
9721650 |
T |
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| Q |
108 |
tagattgaatacaaagagagtattgatggaagcttgtgaggaagaaaatggcaaaaagataccaaagttgccattattcatgagccctccaccaatgcat |
207 |
Q |
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| T |
9721649 |
tagattgaatacaaagagagtattgatggaagcttgtgaggaagaaaatggcaaaaagataccaaagttgccattattcatgagccctccaccaatgcat |
9721550 |
T |
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| Q |
208 |
tattcaccagagagaacaggaacaaaaactccaccacttcatctcac |
254 |
Q |
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| T |
9721549 |
tattcaccagagagatcaggaacaaaaactccaccacttcatatcac |
9721503 |
T |
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