View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12006_high_4 (Length: 331)

Name: NF12006_high_4
Description: NF12006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12006_high_4
NF12006_high_4
[»] chr2 (3 HSPs)
chr2 (172-321)||(38919249-38919398)
chr2 (1-117)||(38919453-38919569)
chr2 (272-321)||(11307971-11308020)
[»] chr6 (4 HSPs)
chr6 (229-306)||(24645528-24645605)
chr6 (234-306)||(4877990-4878061)
chr6 (236-272)||(5000557-5000593)
chr6 (228-272)||(17341615-17341659)
[»] chr8 (4 HSPs)
chr8 (229-306)||(36450689-36450766)
chr8 (276-321)||(13845277-13845322)
chr8 (234-299)||(39820482-39820547)
chr8 (234-266)||(34223021-34223053)
[»] chr7 (3 HSPs)
chr7 (230-305)||(7133208-7133284)
chr7 (234-283)||(40131939-40131989)
chr7 (234-299)||(23751953-23752018)
[»] chr5 (3 HSPs)
chr5 (257-305)||(43554574-43554622)
chr5 (236-299)||(7997108-7997172)
chr5 (234-305)||(32766872-32766943)
[»] chr3 (5 HSPs)
chr3 (234-305)||(4704220-4704292)
chr3 (232-283)||(27277778-27277829)
chr3 (233-305)||(21211341-21211414)
chr3 (232-272)||(17005546-17005586)
chr3 (236-299)||(24204983-24205047)
[»] chr1 (5 HSPs)
chr1 (234-305)||(9690213-9690285)
chr1 (234-283)||(34741916-34741965)
chr1 (234-270)||(32724044-32724080)
chr1 (233-305)||(42004881-42004953)
chr1 (234-282)||(48450550-48450598)
[»] chr4 (8 HSPs)
chr4 (254-312)||(10133749-10133808)
chr4 (234-299)||(18513175-18513241)
chr4 (232-321)||(31243474-31243564)
chr4 (234-306)||(34306744-34306816)
chr4 (234-305)||(16184879-16184950)
chr4 (234-305)||(24343560-24343632)
chr4 (237-304)||(46715416-46715484)
chr4 (234-305)||(53381530-53381602)
[»] scaffold0007 (1 HSPs)
scaffold0007 (236-316)||(225199-225279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (232-283)||(135261-135313)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 38919398 - 38919249
Alignment:
Q  172 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919398 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 38919299  T
Q  272 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38919298 gtgtcggacacgcatcagtatccgacaccgacactaacacgacacctatg 38919249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38919569 - 38919453
Alignment:
Q  1 ctcattcacttcttaactccacaaatccaagcccaagccccagcaccagcaccctcaggcccaatcaacatcacaacaatctttgaaaaagctggtcaat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919569 ctcattcccttcttaactccacaaatccaagcccaagccccagcaccagcaccctcaggcccaatcaacatcacaacaatctttgaaaaagctggtcaat 38919470  T
Q  101 acaacttcctcattcgt 117  Q
    |||||||||||||||||    
T  38919469 acaacttcctcattcgt 38919453  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 11307971 - 11308020
Alignment:
Q  272 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 321  Q
    |||||||||||||||| || ||| ||||||||||  ||||||||||||||    
T  11307971 gtgtcggacacgcgtcggtgtccaacaccgacaccgacacgacacctatg 11308020  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 24645605 - 24645528
Alignment:
Q  229 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 306  Q
    ||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||| ||| || || ||||||||||||    
T  24645605 ggtaactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtc-gtgtctgacaccgacact 24645528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 4878061 - 4877990
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacact 306  Q
    |||||||||||  |||||| || |||||| |||||||||||||||||| | ||| || |||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcctgtgtcggacatgtgtc-gtgtccgacaccgacact 4877990  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 5000557 - 5000593
Alignment:
Q  236 atgaagcacaaacactcttcagattagacgtgtcctg 272  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctg 5000593  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 17341615 - 17341659
Alignment:
Q  228 aggtaactatgaagcacaaacactcttcagattagacgtgtcctg 272  Q
    |||||| |||||||||||||||||| || |||||| |||||||||    
T  17341615 aggtaattatgaagcacaaacactcctcggattaggcgtgtcctg 17341659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 36450689 - 36450766
Alignment:
Q  229 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 306  Q
    |||| |||||||||||| |||||| || |||||| |||||||| |||||||||||||||| || ||||||||| |||||    
T  36450689 ggtagctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtc-gtgtccgacacctacact 36450766  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 13845322 - 13845277
Alignment:
Q  276 cggacacgcgtcagtatccgacaccgacactaacacgacacctatg 321  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  13845322 cggacacgcgtcagtgtccgacaccgacacagacacgacacctatg 13845277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 39820547 - 39820482
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 299  Q
    |||||||||||  |||||  || |||||| ||||||| |||||||||||||||| || ||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacac 39820482  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 34223053 - 34223021
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgt 266  Q
    ||||||||||||||||||||| |||||||||||    
T  34223053 ctatgaagcacaaacactctttagattagacgt 34223021  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 7133208 - 7133284
Alignment:
Q  230 gtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||||||  || ||| |||||||||  ||||||  |||||||||||||||| || ||||||||||||||    
T  7133208 gtaactatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacg 283  Q
    |||||||||||| |||||| || |||||||||||| |||||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 23752018 - 23751953
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 299  Q
    |||||||||||| |||||  || |||||| ||||||| ||||| |||||||||| || ||||||||    
T  23752018 ctatgaagcacagacacttatcggattaggcgtgtcccgtgtctgacacgcgtcggtgtccgacac 23751953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 43554622 - 43554574
Alignment:
Q  257 gattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||| ||||||| |||||||||||||||| || ||||||||||||||    
T  43554622 gattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 7997108 - 7997172
Alignment:
Q  236 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 299  Q
    ||||||||||||||||  ||  |||||  |||||||| |||||||||||||||||| ||||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac 7997172  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 32766872 - 32766943
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||  |||||| ||||||||||||| |||| |||||||||||| ||| || | ||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtc-gttttcgacaccgacac 32766943  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 4704220 - 4704292
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||| ||||||||| || |||||||||| ||||||| |||| |||||||||| ||| || |||||||||||    
T  4704220 ctatgacgcacaaacattcctcagattagatgtgtcctagtgttggacacgcgttagtgtcagacaccgacac 4704292  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 27277778 - 27277829
Alignment:
Q  232 aactatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 283  Q
    |||||||||||||| |||||| || |||||||| ||||| ||||||||||||    
T  27277778 aactatgaagcacatacactcctcggattagacatgtcccgtgtcggacacg 27277829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 21211414 - 21211341
Alignment:
Q  233 actatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||||||||||| || ||||||  |||| || |||||||||||||||| || ||  ||||||||||    
T  21211414 actatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacac 21211341  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 17005546 - 17005586
Alignment:
Q  232 aactatgaagcacaaacactcttcagattagacgtgtcctg 272  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  17005546 aactatgaagcacaaacactcctcggattagaggtgtcctg 17005586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 24204983 - 24205047
Alignment:
Q  236 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 299  Q
    |||||||||  |||||| ||  ||||| ||||||||| |||||||||||||||||| ||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 9690213 - 9690285
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||||||||||| | |||||| ||||| || |||||||||||| ||||||  ||||| |||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacac 9690285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 34741965 - 34741916
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 283  Q
    |||||||||||  ||||||||| |||||| ||||||| ||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtcccgtgtcggacacg 34741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 32724044 - 32724080
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcc 270  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  32724044 ctatgaagcacaaagactcttcagattaaacgtgtcc 32724080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 42004881 - 42004953
Alignment:
Q  233 actatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    ||||||||||||  |||||||||  ||||| |||||   |||||||||| ||||| || ||||||||||||||    
T  42004881 actatgaagcacggacactcttcgaattaggcgtgtttagtgtcggacatgcgtcggtgtccgacaccgacac 42004953  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 48450550 - 48450598
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacac 282  Q
    |||||||||||  |||||| || |||||||||||||||||||| |||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcctgtgtccgacac 48450598  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 10133808 - 10133749
Alignment:
Q  254 tcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacg 312  Q
    |||||||||  |||||||| |||||||||||||||||| || ||||||||||| ||||||    
T  10133808 tcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacaccaacacg 10133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 18513175 - 18513241
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacac 299  Q
    |||||||||||  |||||| ||||||||| |||||||| ||||||||||| |||| || ||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacac 18513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 31243474 - 31243564
Alignment:
Q  232 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 321  Q
    ||||||||| ||||||||||| ||| |||||  ||||||| |||||| |||||| || || ||||||||| ||||  ||| ||||||||||    
T  31243474 aactatgaaccacaaacactcctcatattaggtgtgtcctggtgtcgaacacgcatcggtgtccgacaccaacaccgacatgacacctatg 31243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 34306744 - 34306816
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtc-ctgtgtcggacacgcgtcagtatccgacaccgacact 306  Q
    ||||||||||| |||| || ||||||||| |||||| | |||||||||||| ||| || |||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacact 34306816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 16184950 - 16184879
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 305  Q
    ||||||||||||||||||| || |||||| ||||| || |||||||||| || || |||| ||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatc-gtatgcgacaccgacac 16184879  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 24343632 - 24343560
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||  |||||| ||||| ||| ||||||| | ||||||||||||||| || || |||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 46715416 - 46715484
Alignment:
Q  237 tgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgaca 304  Q
    |||||||| ||||||| || |||||||| ||| || |||||||||||||| |||| |||||||| ||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtccgacacagaca 46715484  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  234 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 305  Q
    |||||||||||  |||||| || ||||||  |||||| | ||||||| |||||||||| ||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 225199 - 225279
Alignment:
Q  236 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacgacac 316  Q
    |||||||||  |||||| ||  ||||| ||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgaca-cgacaccaacacgacac 225279  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 135261 - 135313
Alignment:
Q  232 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacg 283  Q
    ||||||||||||| ||||| | ||||||||| |||||||| ||||||||||||    
T  135261 aactatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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