View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12008_low_14 (Length: 237)

Name: NF12008_low_14
Description: NF12008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12008_low_14
NF12008_low_14
[»] chr3 (8 HSPs)
chr3 (3-82)||(46692066-46692145)
chr3 (3-71)||(46691972-46692041)
chr3 (55-101)||(42530737-42530783)
chr3 (3-71)||(42530736-42530804)
chr3 (3-101)||(50295558-50295657)
chr3 (54-143)||(50295546-50295636)
chr3 (42-101)||(46692075-46692133)
chr3 (19-102)||(50295526-50295610)
[»] chr5 (13 HSPs)
chr5 (1-71)||(24137046-24137116)
chr5 (54-128)||(9511781-9511856)
chr5 (7-97)||(9511782-9511873)
chr5 (3-71)||(24136891-24136960)
chr5 (4-71)||(9511777-9511845)
chr5 (42-101)||(24136892-24136951)
chr5 (85-164)||(9511776-9511856)
chr5 (54-101)||(24137047-24137093)
chr5 (3-97)||(11335392-11335485)
chr5 (55-97)||(24136813-24136855)
chr5 (65-127)||(24137051-24137113)
chr5 (42-71)||(24136984-24137013)
chr5 (65-101)||(24136985-24137021)
[»] chr6 (17 HSPs)
chr6 (3-71)||(21862241-21862309)
chr6 (3-71)||(21862144-21862212)
chr6 (7-71)||(28063554-28063618)
chr6 (44-101)||(21862145-21862201)
chr6 (3-127)||(28063641-28063771)
chr6 (42-101)||(21862242-21862300)
chr6 (3-78)||(21862044-21862119)
chr6 (58-101)||(28063575-28063617)
chr6 (3-41)||(10741529-10741567)
chr6 (55-97)||(21862056-21862098)
chr6 (65-127)||(21862246-21862308)
chr6 (3-71)||(13167485-13167554)
chr6 (38-71)||(13167579-13167612)
chr6 (32-103)||(13097901-13097973)
chr6 (91-162)||(13097903-13097975)
chr6 (5-97)||(13167368-13167459)
chr6 (75-127)||(21862149-21862201)
[»] chr7 (18 HSPs)
chr7 (3-71)||(15623106-15623174)
chr7 (3-71)||(15623013-15623081)
chr7 (3-71)||(15623199-15623267)
chr7 (3-71)||(44338471-44338539)
chr7 (55-101)||(44338380-44338426)
chr7 (1-97)||(21813824-21813921)
chr7 (3-112)||(11828577-11828688)
chr7 (54-143)||(11828598-11828688)
chr7 (56-129)||(21813822-21813896)
chr7 (55-97)||(44338292-44338334)
chr7 (55-97)||(46963840-46963882)
chr7 (3-71)||(44338287-44338355)
chr7 (3-71)||(44338379-44338447)
chr7 (53-101)||(15623033-15623080)
chr7 (54-101)||(15623127-15623173)
chr7 (54-101)||(15623220-15623266)
chr7 (54-101)||(44338472-44338518)
chr7 (3-97)||(46963819-46963913)
[»] chr2 (13 HSPs)
chr2 (3-71)||(1173304-1173372)
chr2 (24-168)||(1173541-1173687)
chr2 (3-71)||(1173397-1173465)
chr2 (3-147)||(1173490-1173635)
chr2 (4-97)||(38584136-38584234)
chr2 (1-127)||(38584102-38584234)
chr2 (55-97)||(8986221-8986263)
chr2 (49-101)||(1173413-1173464)
chr2 (42-101)||(1173313-1173371)
chr2 (3-97)||(8986190-8986284)
chr2 (54-128)||(38584125-38584200)
chr2 (68-98)||(32290651-32290681)
chr2 (5-78)||(38584168-38584246)
[»] chr1 (10 HSPs)
chr1 (3-71)||(15629951-15630019)
chr1 (3-66)||(15630043-15630107)
chr1 (42-97)||(15630052-15630107)
chr1 (35-101)||(19825087-19825153)
chr1 (65-128)||(15630044-15630108)
chr1 (9-78)||(19825091-19825161)
chr1 (54-97)||(2072389-2072432)
chr1 (54-101)||(2075919-2075966)
chr1 (4-42)||(19825117-19825155)
chr1 (65-101)||(15629952-15629988)
[»] chr4 (11 HSPs)
chr4 (3-97)||(54147687-54147782)
chr4 (5-101)||(42265397-42265492)
chr4 (3-71)||(16870748-16870816)
chr4 (55-97)||(16870659-16870701)
chr4 (54-143)||(54147671-54147761)
chr4 (3-40)||(54147869-54147906)
chr4 (3-97)||(16870628-16870722)
chr4 (4-102)||(54147651-54147750)
chr4 (91-127)||(24225514-24225551)
chr4 (4-71)||(42265396-42265462)
chr4 (65-101)||(54147869-54147905)
[»] chr8 (10 HSPs)
chr8 (3-71)||(20242148-20242216)
chr8 (55-101)||(20242057-20242103)
chr8 (55-101)||(20250964-20251010)
chr8 (55-97)||(20241969-20242011)
chr8 (55-97)||(20251056-20251098)
chr8 (3-71)||(20241964-20242032)
chr8 (3-71)||(20242056-20242124)
chr8 (3-71)||(20250943-20251011)
chr8 (3-71)||(20251035-20251103)
chr8 (54-101)||(20242149-20242195)
[»] scaffold0499 (1 HSPs)
scaffold0499 (4-103)||(7238-7335)


Alignment Details
Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 46692066 - 46692145
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaagtgtgagaact 82  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  46692066 aaaccaaattgtgagcactcgactcaccaaacaactaaatgtgagaattagactcaccaaacaaccaaattgtgagaact 46692145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 46691972 - 46692041
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaa-caaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  46691972 aaaccaaattgtgaacactcgactcaccaaaacaaccaaatgtgagaactagactcaccaaaccaccaaa 46692041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 42530783 - 42530737
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42530783 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 42530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 42530804 - 42530736
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||||||||||    
T  42530804 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaaa 42530736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 50295657 - 50295558
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||| |||| |||  ||||||| ||||| |||| |  |||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  50295657 aaaccaaattatgagtacttaactcaccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcactcgactcacgaaacaaccaa 50295558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 50295636 - 50295546
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaatcaattgtgagcact 143  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||| || ||| ||||||||| |||| ||||||   |||||||||||||    
T  50295636 actcaccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcactcgactcacgaaacaaccaaattgtgagcact 50295546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 46692075 - 46692133
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||| ||| ||||||||||||||| ||| |||||||| | ||||||||||||||||||    
T  46692075 tgtgagcactcgactcaccaaacaactaaa-tgtgagaattagactcaccaaacaaccaa 46692133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 50295610 - 50295526
Alignment:
Q  19 actcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaat 102  Q
    |||| ||||||| ||||||| || |||||| ||| ||||||| ||||||||||| |||||| ||| ||| ||| |||||| ||||    
T  50295610 actcaactcaccaaacaacccaagtgtgagcactcgactcacgaaacaaccaaattgtgagcacttgacccactaaacaaacaat 50295526  T

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Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24137116 - 24137046
Alignment:
Q  1 aaaaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24137116 aaaaaccaaattgtgagcactcaactcaccaaacaaccaaatgtgagaactagactcaccaaacaaccaaa 24137046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 9511856 - 9511781
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaa 128  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| || ||| ||||||||| ||||||||||||    
T  9511856 actcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaa 9511781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 9511873 - 9511782
Alignment:
Q  7 caaattgtgagcactcgactcacctaacaaccaaat-gtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||| | |  ||||||| ||||||||||| ||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  9511873 caaattgtgagtatttaactcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaa 9511782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 24136960 - 24136891
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||| ||||||||||||||||||||||| |||||||||| |||||||| | | |||||||||||||||||    
T  24136960 aaacaaaattgtgagcactcgactcaccaaacaaccaaattgtgagaagtcggctcaccaaacaaccaaa 24136891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 9511845 - 9511777
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaacc-aaatgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||||||||||||||||||||||||| ||||||| || |||||| ||| |||||||||||||| ||||    
T  9511845 aaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaa 9511777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 24136951 - 24136892
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||| ||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  24136951 tgtgagcactcgactcaccaaacaaccaaattgtgagaagtcggctcaccaaacaaccaa 24136892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 9511856 - 9511776
Alignment:
Q  85 actcaccaaacaaccaa-ttgtaagcactcgattcaccaaacaaatcaattgtgagcactcgacttatcaaacaaccaaac 164  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||   || ||||||||||||||| | ||||||| |||||    
T  9511856 actcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaac 9511776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 24137093 - 24137047
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  24137093 actcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaa 24137047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 11335392 - 11335485
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||| |||   | |||||||||| |||| |||||| ||| ||| | ||||||||    
T  11335392 aaaccaaattgtgagcattcgactcaccaaacaaccaaagtgtgagtact--tcccaccaaacaaacaaattgtgagcacttgacccgccaaacaa 11335485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 24136855 - 24136813
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||| | ||||||||||||||||||| |||||    
T  24136855 ctcaccaaacaaccataatgtgagaactcgactcacccaacaa 24136813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 24137113 - 24137051
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaaccaattgtaagcactcgattcaccaaacaa 127  Q
    ||||||| |||||| |||| ||||||||||||||||| ||| || ||| || |||||||||||    
T  24137113 aaccaaattgtgagcactcaactcaccaaacaaccaaatgtgagaactagactcaccaaacaa 24137051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 24137013 - 24136984
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||||||||||||||||||||||||||||    
T  24137013 tgtgagaactagactcaccaaacaaccaaa 24136984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 24137021 - 24136985
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  24137021 aaccaaattgtgagaactagactcaccaaacaaccaa 24136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 21862309 - 21862241
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21862309 aaaccaaattgtgagcactcgactcaccaaacaaccaaatgtgagagctagactcaccaaacaaccaaa 21862241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 21862212 - 21862144
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21862212 aaaccaaatattgagcactcgactcaccaaacaaccaaatgtgagaactagactcaccaaacaaccaaa 21862144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 28063554 - 28063618
Alignment:
Q  7 caaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||||| ||| | || ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  28063554 caaattgggagaattcaacttaccaaacaaccaaatgtgagaactagactcaccaaacaaccaaa 28063618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 21862201 - 21862145
Alignment:
Q  44 tgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  21862201 tgagcactcgactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaa 21862145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 28063641 - 28063771
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactag-------actcaccaaacaaccaaagtgtgagaactcgactcaccaaac 95  Q
    ||||||||||||||||||  |||||||| ||||||||| |||||| ||| |       ||||||||||||| | || |||||| |||| ||||| |||||    
T  28063641 aaaccaaattgtgagcacctgactcaccaaacaaccaattgtgagcactcggctcaccactcaccaaacaaactaattgtgagcactc-actcatcaaac 28063739  T
Q  96 aaccaattgtaagcactcgattcaccaaacaa 127  Q
    |||||||||| |||| |||| ||| |||||||    
T  28063740 aaccaattgtgagcaatcgactcaacaaacaa 28063771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 21862300 - 21862242
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||| ||| ||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  21862300 tgtgagcactcgactcaccaaacaaccaaa-tgtgagagctagactcaccaaacaaccaa 21862242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 21862119 - 21862044
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgag 78  Q
    |||||||||||||||||| || |||| | |||||||||| |||||||| | |||||||||||||| |||| ||||||    
T  21862119 aaaccaaattgtgagcacacg-ctcaacaaacaaccaaaatgtgagaattcgactcaccaaacaagcaaattgtgag 21862044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 28063575 - 28063617
Alignment:
Q  58 accaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  28063575 accaaacaaccaaa-tgtgagaactagactcaccaaacaaccaa 28063617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 10741567 - 10741529
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa 41  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  10741567 aaaccaaattgtgagtactcgactcaccgaacaaccaaa 10741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 21862098 - 21862056
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||| |||||||||||| |||||||| ||||||||||||||||    
T  21862098 ctcaacaaacaaccaaaatgtgagaattcgactcaccaaacaa 21862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 21862308 - 21862246
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaaccaattgtaagcactcgattcaccaaacaa 127  Q
    ||||||| |||||| |||||||||||||||||||||| ||| ||  || || |||||||||||    
T  21862308 aaccaaattgtgagcactcgactcaccaaacaaccaaatgtgagagctagactcaccaaacaa 21862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13167554 - 13167485
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacc-taacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||| |||||||||||||||||||  |||||  ||||||||||| |  |||||||| |||||||||    
T  13167554 aaaccaaactgtgagcactcgactcaccggaacaatgaaatgtgagaattttactcaccacacaaccaaa 13167485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 13167612 - 13167579
Alignment:
Q  38 caaatgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  13167612 caaatgtaagaactagactcaccaaacaaccaaa 13167579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 13097973 - 13097901
Alignment:
Q  32 aacaaccaaat-gtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaatt 103  Q
    ||||||||||| ||||| ||| | |||| ||||||| |||  |||||| |||||||||| |||||||||||||    
T  13097973 aacaaccaaattgtgagcacttgtctcaacaaacaaacaatttgtgagcactcgactcatcaaacaaccaatt 13097901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 13097975 - 13097903
Alignment:
Q  91 caaacaaccaa-ttgtaagcactcgattcaccaaacaaatcaattgtgagcactcgacttatcaaacaaccaa 162  Q
    ||||||||||| |||| |||||| |  ||| ||||||||  | |||||||||||||||| |||||||||||||    
T  13097975 caaacaaccaaattgtgagcacttgtctcaacaaacaaacaatttgtgagcactcgactcatcaaacaaccaa 13097903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 13167459 - 13167368
Alignment:
Q  5 accaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||||||||||||  || |||| | |||||| || |||||||| | |||||||||||||| |||| || ||| ||| ||| ||||||||||    
T  13167459 accaaattgtgagcatacg-ctcagcaaacaacaaagtgtgagaattcgactcaccaaacaagcaaattgcgagcacttgacccaccaaacaa 13167368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 21862201 - 21862149
Alignment:
Q  75 tgagaactcgactcaccaaacaaccaattgtaagcactcgattcaccaaacaa 127  Q
    |||| |||||||||||||||||||||| ||| || ||| || |||||||||||    
T  21862201 tgagcactcgactcaccaaacaaccaaatgtgagaactagactcaccaaacaa 21862149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15623106 - 15623174
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15623106 aaacaaaattgtgagcactcaactcaccaaacaaccaaatgtgagaactagactcaccaaacaaccaaa 15623174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15623013 - 15623081
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15623013 aaaccgaatcgtgagcacacgactcaccaaacaaccaaatgtgagaactagactcaccaaacaaccaaa 15623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15623199 - 15623267
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15623199 aaacaaaattgtgagcactcaactcaccaaacaatcaaatgtgagaactagactcaccaaacaaccaaa 15623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 44338539 - 44338471
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| | |||||||  |||||||||||||||||||  ||||||||||||||||||    
T  44338539 aaaccaaattgtgagcacactactcaccagacaaccaaatgtgagaactctactcaccaaacaaccaaa 44338471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 44338426 - 44338380
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  44338426 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaa 44338380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21813921 - 21813824
Alignment:
Q  1 aaaaaccaaattgtgagcactcgactcacctaacaaccaaat-gtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||| | |||    ||||| | ||||||||| ||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  21813921 aaaaaccaaattgtgggtacttatttcaccaagcaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcacttgactcaccaaacaa 21813824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 11828577 - 11828688
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaacc-aaatgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaac-aacca 100  Q
    ||||||||||||||| |||  ||||||| ||||||| ||||||||| ||  ||||||||| ||||||||| |||||| ||| ||| |||||||| ||| |    
T  11828577 aaaccaaattgtgagtacttaactcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgagcacttgacccaccaaactaacaa 11828676  T
Q  101 attgtaagcact 112  Q
    ||||| ||||||    
T  11828677 attgtgagcact 11828688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 11828598 - 11828688
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaatcaattgtgagcact 143  Q
    |||||||||||||||||| |||||| || |||||||||| |||||| |||||| |||||| ||  |||||||| ||  |||||||||||||    
T  11828598 actcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgagcacttgacccaccaaactaacaaattgtgagcact 11828688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 21813896 - 21813822
Alignment:
Q  56 tcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaat 129  Q
    ||||||| |||||||| |||||| |||||||||||||||||||| || ||| |||||| || |||||||||||||    
T  21813896 tcaccaagcaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaat 21813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 44338334 - 44338292
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  44338334 ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaa 44338292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 46963840 - 46963882
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46963840 ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaa 46963882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 44338355 - 44338287
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  44338355 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 44338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 44338447 - 44338379
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  44338447 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 44338379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 15623033 - 15623080
Alignment:
Q  53 gactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  15623033 gactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaa 15623080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 15623127 - 15623173
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  15623127 actcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaa 15623173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 15623220 - 15623266
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  15623220 actcaccaaacaatcaaa-tgtgagaactagactcaccaaacaaccaa 15623266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 44338518 - 44338472
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  44338518 actcaccagacaaccaaa-tgtgagaactctactcaccaaacaaccaa 44338472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 46963819 - 46963913
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||||  | |||||| |||||||||| |||||||| | |||||||||||||| |||| | ||||  || ||| ||||||||||    
T  46963819 aaaccaaattgtgagcacatg-ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaa 46963913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1173304 - 1173372
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  1173304 aaaccaaattgtgagcactcgactcactaaacaatcaaatgtgagaactagactcaccaaacaaccaaa 1173372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 1173541 - 1173687
Alignment:
Q  24 actcacctaacaaccaa-atgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaac-aaccaattgtaagcactcgattcacc 121  Q
    ||||||| ||||| ||| ||||||| ||||||||||||||||||||||| | |||| |||||||||||||||| ||| |||| | |||||||||  ||||    
T  1173541 actcaccaaacaaacaacatgtgagcactagactcaccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaattatgagcactcgacccacc 1173640  T
Q  122 aaacaaatcaattgtgagcactcgacttatcaaacaaccaaacaaac 168  Q
    |||||||  |||| |||||||| |||  | ||||||| |||||||||    
T  1173641 aaacaaacaaattatgagcacttgacccaccaaacaaacaaacaaac 1173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1173397 - 1173465
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  1173397 aaaccaaattgtgtgcactagactcaccaaacaaccaaatgtgagaattagactcaccaaacaaccaaa 1173465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 1173490 - 1173635
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-a 100  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||  ||  ||||||||||||| |||  |||||| ||| |||||||||||||||| |    
T  1173490 aaaccaaattgtgagcactagactcaccaaacaaccaaagtgtgagcgct-tactcaccaaacaaacaacatgtgagcactagactcaccaaacaaccaa 1173588  T
Q  101 attgtaagcactcgattcaccaaacaaatcaattgtgagcactcgac 147  Q
    | | | || |||||| ||||||||||||  |||| ||||||||||||    
T  1173589 aatatgagtactcgactcaccaaacaaacaaattatgagcactcgac 1173635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 38584136 - 38584234
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaaccaaat-gtgagaactagactcacca----aacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||||  ||||||| ||| ||||||| ||||| ||| |||||||||    |||||||||| |||||| ||||||||||||||||||    
T  38584136 aaccaaattgtgagcacttaactcaccaaactaccaaattgtgagcacttgactcaccaaccaaacaaccaaaatgtgagcactcgactcaccaaacaa 38584234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38584102 - 38584234
Alignment:
Q  1 aaaaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactc----accaaac 95  Q
    ||||| ||||||||||||| |  ||||||| |||||||||| |||||| |||  ||||||||||| |||||| |||||| ||| |||||    |||||||    
T  38584102 aaaaatcaaattgtgagcatttaactcaccaaacaaccaaattgtgagcacttaactcaccaaactaccaaattgtgagcacttgactcaccaaccaaac 38584201  T
Q  96 aacc-aattgtaagcactcgattcaccaaacaa 127  Q
    |||| || ||| ||||||||| |||||||||||    
T  38584202 aaccaaaatgtgagcactcgactcaccaaacaa 38584234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 8986263 - 8986221
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  8986263 ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaa 8986221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 1173413 - 1173464
Alignment:
Q  49 actagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  1173413 actagactcaccaaacaaccaaa-tgtgagaattagactcaccaaacaaccaa 1173464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 1173313 - 1173371
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||| ||| ||||||| |||||| |||| |||||||||| ||||||||||||||||||    
T  1173313 tgtgagcactcgactcactaaacaatcaaa-tgtgagaactagactcaccaaacaaccaa 1173371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 8986284 - 8986190
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||||  | |||||| |||||||||| |||||||| | |||||||||||||| |||| | ||||  || ||| ||||||||||    
T  8986284 aaaccaaattgtgagcacatg-ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaa 8986190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 38584125 - 38584200
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaa 128  Q
    |||||||||||||||||| |||||| |||  ||||||||||| ||| |||||| |||||| || ||||||| ||||    
T  38584125 actcaccaaacaaccaaattgtgagcacttaactcaccaaactaccaaattgtgagcacttgactcaccaaccaaa 38584200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Complemental strand, 32290681 - 32290651
Alignment:
Q  68 caaagtgtgagaactcgactcaccaaacaac 98  Q
    |||||||||||||||||||||||||||||||    
T  32290681 caaagtgtgagaactcgactcaccaaacaac 32290651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 38584168 - 38584246
Alignment:
Q  5 accaaattgtgagcactcgactcaccta----acaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgag 78  Q
    ||||||||||||||||| |||||||| |    ||||||||| |||||| ||| |||||||||||||| |||| ||||||    
T  38584168 accaaattgtgagcacttgactcaccaaccaaacaaccaaaatgtgagcactcgactcaccaaacaagcaaattgtgag 38584246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15629951 - 15630019
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  15629951 aaaccaaattgtgagcactcgactcaccaaacaaccaaatgtgagaattagactcactaaacaaccaaa 15630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 15630043 - 15630107
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaa 66  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||    
T  15630043 aaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaa 15630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 15630052 - 15630107
Alignment:
Q  42 tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15630052 tgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaa 15630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 19825087 - 19825153
Alignment:
Q  35 aaccaaatgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||| |||||| |||  |||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  19825087 aaccaattgtgagcacttaactcaccaaacaaccaaattgtgagcactcgactcgccaaacaaccaa 19825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 15630044 - 15630108
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaacc-aattgtaagcactcgattcaccaaacaaa 128  Q
    ||||||| |||||| |||||||||||||||||||| || ||| ||||||||| ||||||||||||    
T  15630044 aaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaaa 15630108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 19825091 - 19825161
Alignment:
Q  9 aattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgag 78  Q
    |||||||||||||  ||||||| |||||||||| |||||| ||| ||||| ||||||||||||| ||||||    
T  19825091 aattgtgagcacttaactcaccaaacaaccaaattgtgagcactcgactcgccaaacaaccaaattgtgag 19825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 2072389 - 2072432
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||||||||||||||||| |||| |||||||||| |||||||    
T  2072389 actcaccaaacaaccaaagtatgagcactcgactcatcaaacaa 2072432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 2075919 - 2075966
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||||||||||||||| |||| |||||||||  |||||||||||    
T  2075919 actcaccaaacaaccaaagtatgagcactcgactcgtcaaacaaccaa 2075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 19825117 - 19825155
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaaccaaat 42  Q
    |||||||||||||||||||||||| || |||||||||||    
T  19825117 aaccaaattgtgagcactcgactcgccaaacaaccaaat 19825155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 15629952 - 15629988
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  15629952 aaccaaattgtgagcactcgactcaccaaacaaccaa 15629988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 54147782 - 54147687
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||||   ||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  54147782 aaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaactaaagtgtgagcacctgactcaccaaacaa 54147687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 42265492 - 42265397
Alignment:
Q  5 accaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||| || ||||| |||||||||| |||||| ||| |||||||||||||||||||  ||||| ||| || |||||||||||||||    
T  42265492 accaaattgtgagcacttgaatcaccaaacaaccaaattgtgag-actcgactcaccaaacaaccaaacagtgagcacttga-tcaccaaacaaccaa 42265397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 16870816 - 16870748
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||| ||||||||||||||||  ||||||||||||| |||||| ||||||| || ||||||||    
T  16870816 aaaccaaattatgagcactcgactcacgaaacaaccaaatgtaagaacttgactcactaatcaaccaaa 16870748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 16870701 - 16870659
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  16870701 ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaa 16870659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 54147761 - 54147671
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaac-caattgtaagcactcgattcaccaaacaaatcaattgtgagcact 143  Q
    |||||||||||||||||| |||||||||| |||||||||||||||  || ||| |||||  || ||||||||||||  |||| ||||||||    
T  54147761 actcaccaaacaaccaaaatgtgagaactagactcaccaaacaactaaagtgtgagcacctgactcaccaaacaaacaaattatgagcact 54147671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 54147906 - 54147869
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaa 40  Q
    |||||||||||||||||||||||||||| |||||||||    
T  54147906 aaaccaaattgtgagcactcgactcaccaaacaaccaa 54147869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16870722 - 16870628
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||||  | |||||| |||||||||| |||||||| | |||||||||||||| |||| | ||||  || ||| ||||||||||    
T  16870722 aaaccaaattgtgagcacatg-ctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaa 16870628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 54147750 - 54147651
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaat 102  Q
    ||||||| |||||| ||| |||||||| |||||| ||| |||||| ||  |||||||||||||| |||| | |||| ||| ||| |||||||||| ||||    
T  54147750 aaccaaaatgtgagaactagactcaccaaacaactaaagtgtgagcacctgactcaccaaacaaacaaattatgagcacttgacccaccaaacaaacaat 54147651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 24225551 - 24225514
Alignment:
Q  91 caaacaaccaa-ttgtaagcactcgattcaccaaacaa 127  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  24225551 caaacaaccaaattgtaagcactcgattcaccaaacaa 24225514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42265462 - 42265396
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaaccaaat-gtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||| |||||||||||| ||||||||||  ||||| ||| || ||||||||||||||||    
T  42265462 aaccaaattgtgag-actcgactcaccaaacaaccaaacagtgagcacttga-tcaccaaacaaccaaa 42265396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 54147905 - 54147869
Alignment:
Q  65 aaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  54147905 aaccaaattgtgagcactcgactcaccaaacaaccaa 54147869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20242216 - 20242148
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| | |||||||  |||||||||||||||||||  ||||||||||||||||||    
T  20242216 aaaccaaattgtgagcacactactcaccagacaaccaaatgtgagaactctactcaccaaacaaccaaa 20242148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 20242103 - 20242057
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20242103 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaa 20242057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 20250964 - 20251010
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20250964 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaa 20251010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 20242011 - 20241969
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20242011 ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaa 20241969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 20251056 - 20251098
Alignment:
Q  55 ctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 97  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20251056 ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaa 20251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20242032 - 20241964
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  20242032 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 20241964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20242124 - 20242056
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  20242124 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 20242056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 20250943 - 20251011
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  20250943 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 20251011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 20251035 - 20251103
Alignment:
Q  3 aaaccaaattgtgagcactcgactcacctaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 71  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  20251035 aaaccaaattgtgagcacacg-ctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 20251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 20242195 - 20242149
Alignment:
Q  54 actcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 101  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  20242195 actcaccagacaaccaaa-tgtgagaactctactcaccaaacaaccaa 20242149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 7238 - 7335
Alignment:
Q  4 aaccaaattgtgagcactcgactcacctaacaaccaaatgtgagaactagactcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaatt 103  Q
    |||||||||||||||||  |||||||| ||| |  || |||||| | | | |||| ||||||| |||  |||||| ||||||||||||||||||||||||    
T  7238 aaccaaattgtgagcacctgactcaccaaacta--aattgtgagcatttgtctcaacaaacaatcaatttgtgagcactcgactcaccaaacaaccaatt 7335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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