View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12009_high_19 (Length: 338)

Name: NF12009_high_19
Description: NF12009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12009_high_19
NF12009_high_19
[»] chr6 (24 HSPs)
chr6 (1-158)||(9953036-9953193)
chr6 (1-154)||(23388995-23389149)
chr6 (1-154)||(23379656-23379810)
chr6 (3-158)||(5739034-5739190)
chr6 (49-124)||(13004434-13004509)
chr6 (3-110)||(34501462-34501569)
chr6 (1-157)||(2371414-2371570)
chr6 (77-158)||(28666095-28666176)
chr6 (67-158)||(10289186-10289277)
chr6 (49-158)||(31071494-31071603)
chr6 (88-143)||(20181288-20181343)
chr6 (88-143)||(22154648-22154703)
chr6 (51-112)||(6512442-6512503)
chr6 (49-112)||(28112641-28112704)
chr6 (121-158)||(12981151-12981188)
chr6 (60-108)||(12991556-12991604)
chr6 (119-158)||(9314765-9314804)
chr6 (119-158)||(21633551-21633590)
chr6 (119-158)||(22463515-22463554)
chr6 (119-158)||(28116940-28116979)
chr6 (119-156)||(9840320-9840357)
chr6 (118-158)||(2378435-2378475)
chr6 (9-41)||(13004611-13004643)
chr6 (118-158)||(15543215-15543255)
[»] chr3 (34 HSPs)
chr3 (1-158)||(35411676-35411834)
chr3 (1-158)||(538015-538172)
chr3 (1-158)||(23299396-23299553)
chr3 (1-158)||(16185499-16185656)
chr3 (1-158)||(6921890-6922047)
chr3 (1-158)||(52198305-52198462)
chr3 (1-158)||(10884018-10884175)
chr3 (1-158)||(18645584-18645741)
chr3 (67-158)||(53814971-53815062)
chr3 (33-158)||(10107489-10107614)
chr3 (4-158)||(29344618-29344773)
chr3 (48-158)||(3839790-3839903)
chr3 (67-158)||(16243166-16243257)
chr3 (67-157)||(9380012-9380102)
chr3 (68-158)||(54460367-54460457)
chr3 (68-158)||(34984668-34984758)
chr3 (49-158)||(19302255-19302364)
chr3 (71-158)||(10880776-10880863)
chr3 (67-158)||(41976321-41976412)
chr3 (67-150)||(54736759-54736842)
chr3 (77-158)||(20729395-20729477)
chr3 (66-155)||(43808881-43808970)
chr3 (60-136)||(31548573-31548649)
chr3 (54-158)||(17532565-17532669)
chr3 (56-137)||(19305445-19305526)
chr3 (1-136)||(22994435-22994570)
chr3 (30-74)||(55032789-55032833)
chr3 (1-46)||(9380143-9380188)
chr3 (122-158)||(31857055-31857091)
chr3 (118-158)||(50462415-50462455)
chr3 (119-158)||(9157508-9157547)
chr3 (120-158)||(2280741-2280779)
chr3 (120-158)||(42355298-42355336)
chr3 (118-158)||(43926124-43926164)
[»] chr5 (26 HSPs)
chr5 (1-158)||(43490793-43490950)
chr5 (3-158)||(32837083-32837238)
chr5 (1-158)||(22937898-22938055)
chr5 (1-158)||(37214766-37214923)
chr5 (1-158)||(42061486-42061643)
chr5 (1-158)||(28442024-28442181)
chr5 (1-158)||(31862872-31863029)
chr5 (30-158)||(14376706-14376834)
chr5 (66-158)||(28788309-28788401)
chr5 (49-158)||(14016927-14017036)
chr5 (67-158)||(21336650-21336742)
chr5 (67-158)||(21827949-21828041)
chr5 (49-158)||(17747617-17747726)
chr5 (67-156)||(39191333-39191422)
chr5 (67-158)||(40916795-40916889)
chr5 (67-158)||(18031710-18031801)
chr5 (4-153)||(4100278-4100431)
chr5 (94-158)||(7270241-7270305)
chr5 (77-136)||(2836702-2836761)
chr5 (77-158)||(30065562-30065643)
chr5 (67-124)||(2837584-2837641)
chr5 (109-158)||(25329456-25329505)
chr5 (49-112)||(7624303-7624366)
chr5 (118-158)||(41307405-41307445)
chr5 (1-46)||(21336564-21336609)
chr5 (67-107)||(33551385-33551425)
[»] chr7 (23 HSPs)
chr7 (1-158)||(8276012-8276169)
chr7 (1-158)||(26556510-26556667)
chr7 (1-158)||(10431386-10431543)
chr7 (3-158)||(4542074-4542229)
chr7 (3-158)||(2442122-2442277)
chr7 (67-158)||(45288047-45288138)
chr7 (67-158)||(45291383-45291474)
chr7 (48-158)||(20081530-20081640)
chr7 (60-158)||(17729973-17730071)
chr7 (67-158)||(9865551-9865642)
chr7 (67-158)||(9080376-9080467)
chr7 (67-158)||(10344616-10344707)
chr7 (67-158)||(4596833-4596924)
chr7 (67-158)||(4694723-4694814)
chr7 (5-127)||(9273882-9274003)
chr7 (49-158)||(16164889-16164998)
chr7 (49-158)||(48644616-48644725)
chr7 (49-158)||(6602621-6602730)
chr7 (89-158)||(48645852-48645921)
chr7 (118-158)||(37167030-37167070)
chr7 (120-158)||(11826392-11826430)
chr7 (77-107)||(18563366-18563396)
chr7 (129-158)||(13450736-13450765)
[»] chr4 (48 HSPs)
chr4 (1-158)||(15431164-15431321)
chr4 (1-158)||(15437778-15437935)
chr4 (1-158)||(18910604-18910761)
chr4 (1-158)||(33410805-33410962)
chr4 (6-158)||(3798644-3798796)
chr4 (8-158)||(5669628-5669778)
chr4 (3-158)||(5680469-5680624)
chr4 (1-158)||(5721814-5721971)
chr4 (1-158)||(19865486-19865643)
chr4 (1-158)||(9716951-9717108)
chr4 (40-158)||(14571026-14571144)
chr4 (9-158)||(12237354-12237503)
chr4 (8-158)||(49269735-49269885)
chr4 (1-157)||(19861130-19861286)
chr4 (9-108)||(40617663-40617762)
chr4 (30-158)||(37104113-37104241)
chr4 (223-318)||(18449136-18449231)
chr4 (67-150)||(21418987-21419070)
chr4 (67-158)||(3718336-3718427)
chr4 (67-158)||(12782106-12782197)
chr4 (67-150)||(40794200-40794283)
chr4 (1-112)||(53093767-53093878)
chr4 (49-158)||(29323979-29324088)
chr4 (49-158)||(44809795-44809904)
chr4 (70-158)||(44164001-44164090)
chr4 (77-158)||(52007350-52007431)
chr4 (67-158)||(15430674-15430766)
chr4 (67-158)||(15437288-15437380)
chr4 (67-158)||(27013229-27013321)
chr4 (77-158)||(53010377-53010458)
chr4 (67-158)||(27677874-27677966)
chr4 (67-158)||(24044966-24045057)
chr4 (52-153)||(34320738-34320839)
chr4 (50-158)||(56198029-56198137)
chr4 (67-158)||(19826701-19826793)
chr4 (67-158)||(27691933-27692025)
chr4 (77-158)||(19819950-19820032)
chr4 (49-158)||(56194722-56194831)
chr4 (77-158)||(35509201-35509280)
chr4 (49-158)||(47114776-47114885)
chr4 (53-158)||(15405793-15405898)
chr4 (49-158)||(33926121-33926230)
chr4 (49-112)||(15812973-15813036)
chr4 (67-108)||(37741471-37741512)
chr4 (118-158)||(38284375-38284415)
chr4 (130-158)||(17669447-17669475)
chr4 (118-158)||(34018659-34018699)
chr4 (118-158)||(48416408-48416448)
[»] chr8 (23 HSPs)
chr8 (1-158)||(45156761-45156918)
chr8 (1-158)||(14420864-14421021)
chr8 (1-158)||(5540838-5540995)
chr8 (1-158)||(18722152-18722310)
chr8 (1-158)||(10663011-10663168)
chr8 (9-158)||(33878089-33878238)
chr8 (1-154)||(25595527-25595681)
chr8 (1-158)||(43682640-43682798)
chr8 (1-123)||(25228049-25228169)
chr8 (1-154)||(25592342-25592496)
chr8 (49-158)||(18826725-18826834)
chr8 (4-158)||(12582218-12582372)
chr8 (223-318)||(15662654-15662749)
chr8 (49-158)||(22174782-22174891)
chr8 (67-158)||(30640505-30640598)
chr8 (49-158)||(14589707-14589816)
chr8 (67-158)||(19792926-19793019)
chr8 (82-158)||(23612569-23612645)
chr8 (88-158)||(5981150-5981220)
chr8 (48-112)||(38249248-38249312)
chr8 (119-158)||(20261647-20261686)
chr8 (119-158)||(21048277-21048316)
chr8 (118-158)||(16952998-16953038)
[»] chr1 (22 HSPs)
chr1 (1-158)||(29644151-29644308)
chr1 (1-158)||(2793299-2793456)
chr1 (3-158)||(1951190-1951345)
chr1 (3-158)||(49499413-49499568)
chr1 (60-158)||(41059135-41059234)
chr1 (71-158)||(2404722-2404809)
chr1 (49-158)||(45961598-45961707)
chr1 (49-157)||(27537104-27537212)
chr1 (1-112)||(34733106-34733217)
chr1 (77-158)||(21019287-21019367)
chr1 (67-158)||(42021721-42021812)
chr1 (67-158)||(21108302-21108393)
chr1 (49-158)||(31204014-31204123)
chr1 (49-112)||(6071791-6071854)
chr1 (119-158)||(47708778-47708817)
chr1 (121-158)||(22460406-22460443)
chr1 (118-158)||(45940621-45940661)
chr1 (119-158)||(3088696-3088735)
chr1 (129-158)||(22454290-22454319)
chr1 (121-158)||(49147113-49147150)
chr1 (118-158)||(28110283-28110323)
chr1 (118-158)||(37184743-37184783)
[»] chr2 (34 HSPs)
chr2 (1-158)||(25869835-25869992)
chr2 (1-158)||(25873203-25873360)
chr2 (4-158)||(16788389-16788542)
chr2 (1-158)||(26358672-26358829)
chr2 (1-158)||(36809278-36809435)
chr2 (1-158)||(38006129-38006286)
chr2 (1-158)||(25139883-25140040)
chr2 (1-158)||(25821760-25821922)
chr2 (4-158)||(30275537-30275691)
chr2 (30-158)||(15466170-15466298)
chr2 (67-158)||(10599951-10600042)
chr2 (49-158)||(38014636-38014745)
chr2 (67-158)||(3874482-3874573)
chr2 (49-158)||(31430529-31430638)
chr2 (83-158)||(5665830-5665905)
chr2 (77-158)||(43722904-43722985)
chr2 (70-158)||(13972725-13972813)
chr2 (77-158)||(5104953-5105032)
chr2 (67-156)||(13136764-13136853)
chr2 (30-158)||(29439597-29439723)
chr2 (49-155)||(36985626-36985732)
chr2 (77-158)||(6825974-6826055)
chr2 (49-158)||(45453051-45453160)
chr2 (49-123)||(31428340-31428414)
chr2 (49-158)||(45456300-45456409)
chr2 (118-158)||(9189532-9189572)
chr2 (118-158)||(37280556-37280596)
chr2 (118-158)||(43208769-43208809)
chr2 (120-158)||(31586785-31586823)
chr2 (130-158)||(1504290-1504318)
chr2 (130-158)||(1507492-1507520)
chr2 (118-158)||(8887842-8887882)
chr2 (118-158)||(25957323-25957363)
chr2 (118-158)||(40780658-40780698)
[»] scaffold0035 (1 HSPs)
scaffold0035 (8-158)||(61597-61747)
[»] scaffold0005 (2 HSPs)
scaffold0005 (40-158)||(246232-246350)
scaffold0005 (1-147)||(290974-291120)
[»] scaffold0015 (1 HSPs)
scaffold0015 (42-158)||(197242-197358)
[»] scaffold0757 (1 HSPs)
scaffold0757 (67-158)||(4563-4654)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-135)||(26277-26402)
[»] scaffold0270 (3 HSPs)
scaffold0270 (67-158)||(969-1060)
scaffold0270 (67-158)||(4329-4420)
scaffold0270 (67-158)||(11459-11550)
[»] scaffold0334 (1 HSPs)
scaffold0334 (34-158)||(18463-18588)
[»] scaffold0381 (1 HSPs)
scaffold0381 (67-158)||(6462-6554)
[»] scaffold0520 (1 HSPs)
scaffold0520 (68-158)||(4790-4880)
[»] scaffold0045 (1 HSPs)
scaffold0045 (52-158)||(88965-89071)
[»] scaffold1993 (1 HSPs)
scaffold1993 (67-158)||(1045-1136)
[»] scaffold1684 (1 HSPs)
scaffold1684 (53-158)||(369-474)
[»] scaffold0567 (1 HSPs)
scaffold0567 (119-158)||(7016-7055)


Alignment Details
Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9953193 - 9953036
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9953193 tgtgctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 9953094  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  9953093 gtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23388995 - 23389149
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||  |||||| ||||||||||     
T  23388995 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgctgtttaagcttgca 23389094  T
Q  100 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 154  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23389095 tgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23379656 - 23379810
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||  ||| || ||||||||||     
T  23379656 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgca 23379755  T
Q  100 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 154  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23379756 tgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23379810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 5739034 - 5739190
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||  |||||||||    
T  5739034 tgctccaaatcgtgacatgtttttaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgt 5739133  T
Q  103 gaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| || |||||||  ||||| || ||||||||||||||||||||||||||||||    
T  5739134 gaactc-aacatatcatgaaaaaaaactctaaaaatagtgaatgactgactgtcatca 5739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 13004509 - 13004434
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 124  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13004509 tttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 34501569 - 34501462
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| |||  |||||| |||| |||||||||    
T  34501569 tgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcatcaaaatcttctttttttcttgttttctttgctgtttaaacttgcttgt 34501470  T
Q  103 gaactcaa 110  Q
    ||||||||    
T  34501469 gaactcaa 34501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 2371570 - 2371414
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||  || || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |||||||    
T  2371570 tgtgctctaaatctcgatacattttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgttttatttgctgtttaaacttgctt 2371471  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 157  Q
     ||||||| |||||||||| ||||| ||| |||||||||||||| ||| ||| |||||    
T  2371470 atgaactc-aaaatatcataaaaaaaacattaaaaatagtgaataactaactatcatc 2371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 28666095 - 28666176
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  28666095 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 10289277 - 10289186
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  10289277 tttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacttactgtcatca 10289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 31071603 - 31071494
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||| |||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  31071603 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgctcgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgact 31071505  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  31071504 gactgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 20181343 - 20181288
Alignment:
Q  88 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 143  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  20181343 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 20181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 22154648 - 22154703
Alignment:
Q  88 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 143  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  22154648 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 22154703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 6512503 - 6512442
Alignment:
Q  51 tcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    |||||||||||||| | ||||| || ||| ||||||| ||||||||||||||||||||||||    
T  6512503 tcttcaaaatcttcaacttttcatgttttccttgctgtttaagcttgcttgtgaactcaaaa 6512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 28112641 - 28112704
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    |||||||||||||||| | ||||| || ||| ||||||  ||||||||||||||||||||||||    
T  28112641 tttcttcaaaatcttcaacttttcatgctttccttgctttttaagcttgcttgtgaactcaaaa 28112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 12981151 - 12981188
Alignment:
Q  121 aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  12981151 aaaagactctaaaaatagtgaatgactgactgtcatca 12981188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 12991556 - 12991604
Alignment:
Q  60 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 108  Q
    ||||| |||||||||| |||||||| || ||||||||||||||||||||    
T  12991556 tcttcaatttttcttgcttttcttgttgattaagcttgcttgtgaactc 12991604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 9314765 - 9314804
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9314765 taaaaagactctaaaaatagtgtatgactgactgtcatca 9314804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 21633590 - 21633551
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21633590 taaaaagactctaaaaatagtgtatgactgactgtcatca 21633551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 22463554 - 22463515
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  22463554 taaaaagactctaaaaatagtgtatgactgactgtcatca 22463515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 28116979 - 28116940
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  28116979 taaaaagactctaaaaatagtgtatgactgactgtcatca 28116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 9840320 - 9840357
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcat 156  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9840320 taaaaagactctaaaaatagtgaatgactggctgtcat 9840357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 2378475 - 2378435
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  2378475 ataaaaagactctaaaaatagcgaatgacggactgtcatca 2378435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 13004611 - 13004643
Alignment:
Q  9 aaatcgtgacacgttttcgacaatcgtgacacg 41  Q
    |||||||||||||||||| ||||||||||||||    
T  13004611 aaatcgtgacacgttttcaacaatcgtgacacg 13004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 15543255 - 15543215
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  15543255 ataaaaagactctaaaaatagcgaatgacggactgtcatca 15543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 35411834 - 35411676
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  35411834 tgtgttccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttctttgttttcttgctgcttaagtttgctt 35411735  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| ||||||||  || |||||| |||||||||||    
T  35411734 gtgaactcaaaaatatcataaaaagactctaaaaatgttgaaatgacagactgtcatca 35411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 538172 - 538015
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |||| ||    
T  538172 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaacttgttt 538073  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  538072 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 23299396 - 23299553
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |||||||    
T  23299396 tgtgctccaaattgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgctt 23299495  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  23299496 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16185499 - 16185656
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  16185499 tgtgctctaaaacgtgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttatatttttcttgcttttcttgctgcttaagcttgttt 16185598  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||| |||||||||||    
T  16185599 gtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 16185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6922047 - 6921890
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||| |||| |||||||    
T  6922047 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttatatttctcttgttttctttgctgtttaaacttgctt 6921948  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  6921947 gtgaactc-aaaatatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 52198462 - 52198305
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| || ||||||||||||    
T  52198462 tgtgctctaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgctt 52198363  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  52198362 gtgaactc-aaaatatcatgaaaatgacactaaacatagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10884175 - 10884018
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||  |||||| |||| |||||||    
T  10884175 tgtgcttcaaatcgtgacaggttttcaacaatcgtgacacgattttgctttcttcgaaatcttctattttttttgttttcattgctgtttaaacttgctt 10884076  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10884075 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 18645584 - 18645741
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||| ||    
T  18645584 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgttt 18645683  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  18645684 gtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 18645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 53815062 - 53814971
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53815062 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 10107489 - 10107614
Alignment:
Q  33 cgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| |||||||    
T  10107489 cgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacacta 10107587  T
Q  132 aaaatagtgaatgactgactgtcatca 158  Q
    |||| ||||||||||||||||||||||    
T  10107588 aaaacagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 29344618 - 29344773
Alignment:
Q  4 gctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    ||||||||||||| |||||||| | | ||||||||||||||    |||| ||||   ||||| |||||||||| |||||||||||||||| |||||||||    
T  29344618 gctccaaatcgtgtcacgtttttcaataatcgtgacacgatccc-cttttttcagtttcttcaatttttcttgcttttcttgctgcttaatcttgcttgt 29344716  T
Q  103 gaactcaaaaatatcataa-aaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  29344717 gaactcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 3839903 - 3839790
Alignment:
Q  48 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatg 144  Q
    ||||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||| || ||||||||||||||||    
T  3839903 ctttcttcaatttcttcggtttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatg 3839804  T
Q  145 actgactgtcatca 158  Q
    ||||||||||||||    
T  3839803 actgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 16243257 - 16243166
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  16243257 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgattgtcatca 16243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 9380102 - 9380012
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatc 157  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9380102 tttttcttgcttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 54460457 - 54460367
Alignment:
Q  68 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54460457 ttttctttcttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 34984668 - 34984758
Alignment:
Q  68 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  34984668 ttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 19302255 - 19302364
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||||||||||||| | ||| |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||   |||||| |    
T  19302255 tttcttcaaaatcttctatttttctcgctttccttgttgtttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacgg 19302354  T
Q  149 actgtcatca 158  Q
    ||| ||||||    
T  19302355 actatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 10880863 - 10880776
Alignment:
Q  71 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  10880863 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcaaataactgactgtcatca 10880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 41976412 - 41976321
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||    
T  41976412 tttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatattataaaaacactctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 54736759 - 54736842
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 150  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  54736759 ttttttttgcttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaatagtgaatgattgac 54736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 20729395 - 20729477
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| |||||||||||||||||||    
T  20729395 ttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 43808970 - 43808881
Alignment:
Q  66 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtca 155  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||| ||| |||||||    
T  43808970 attttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaataactaactgtca 43808881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 31548649 - 31548573
Alignment:
Q  60 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 136  Q
    ||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31548649 tcttcaatttttcttgcttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaat 31548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 17532565 - 17532669
Alignment:
Q  54 tcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactg 152  Q
    |||||||||||| ||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||    
T  17532565 tcaaaatcttctttttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 17532663  T
Q  153 tcatca 158  Q
    | ||||    
T  17532664 taatca 17532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 19305445 - 19305526
Alignment:
Q  56 aaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaata 137  Q
    |||| ||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  19305445 aaaaacttctatttttctcgctttccttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaata 19305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22994435 - 22994570
Alignment:
Q  1 tgtgctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    ||||||||||||||||||||||||| | |||| |||| ||| ||||  |||||  || |||||||  ||||||||| ||| ||||||| |||||||||||    
T  22994435 tgtgctccaaatcgtgacacgtttttcaacaaccgtgtcactatttcactttcaccacaatcttcagtttttcttgctttccttgctgtttaagcttgct 22994534  T
Q  100 tgtgaactcaaaaatatcataaaaagacactaaaaat 136  Q
    |||| |||| |||||||||||| |  |||||||||||    
T  22994535 tgtggactc-aaaatatcataatattacactaaaaat 22994570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 55032789 - 55032833
Alignment:
Q  30 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55032789 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 55032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9380188 - 9380143
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttt 46  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  9380188 tgtgctctaaatcgtgacacgttttcaacaaccgtgacacgatttt 9380143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 31857091 - 31857055
Alignment:
Q  122 aaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31857091 aaagactctaaaaatagtgaatgactgactgtcatca 31857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 50462415 - 50462455
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  50462415 ataaaaagactctaaaaatagtgaatgacggactgtcatca 50462455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 9157547 - 9157508
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9157547 taaaaagactctaaaaatagtgcatgactgactgtcatca 9157508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 2280741 - 2280779
Alignment:
Q  120 aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  2280741 aaaaagactctaaaaatagtgcatgactgactgtcatca 2280779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 42355298 - 42355336
Alignment:
Q  120 aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  42355298 aaaaaaactctaaaaatagtgaatgactgactgtcatca 42355336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 43926164 - 43926124
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  43926164 ataaaaagactctaaaaatagcgaatgacggactgtcatca 43926124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 9e-61; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 43490950 - 43490793
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  43490950 tgtgctcctaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgttt 43490851  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  43490850 gtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 32837238 - 32837083
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  32837238 tgctccaaatcgtgacacgttttcaacaatcatgacacgattttgctttcttcaaaatcttctatttttctttcttttcttgctgcttaagcttgcttgt 32837139  T
Q  103 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  32837138 gaactcaaaaatatcataaaaagactctaaaaatgtggaatgacatactgtcatca 32837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22937898 - 22938055
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22937898 tgtgctccaaatcgtgatacgttttcaacaaccgtggcacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgctt 22937997  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| |||||||    ||||||| |||||||||||    
T  22937998 gtgaactcaaaaatatcataaaaagactctaaaaacgtggaatgacagactgtcatca 22938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 37214923 - 37214766
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37214923 tgtgctccaaatcgtgacatgttttcaacaattgtgatacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgctt 37214824  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||| |||||| ||||    
T  37214823 gtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgttatca 37214766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 42061643 - 42061486
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  42061643 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgctt 42061544  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  42061543 gtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 42061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28442024 - 28442181
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||  |||||| |||| |||||||    
T  28442024 tgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgctt 28442123  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  28442124 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 31863029 - 31862872
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||| || ||||||||||||    
T  31863029 tgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaattttctatttttcttgctttctttgttgtttaagcttgctt 31862930  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| ||||||| || |||| |||||||||||||  |||||||||||||||||||    
T  31862929 gtgaactc-aaaatattatgaaaatgacactaaaaataaggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 14376706 - 14376834
Alignment:
Q  30 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 128  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||| || |||| ||||||||||||||| |||||||||| |||| ||||    
T  14376706 aatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgatttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 14376804  T
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||    
T  14376805 ctaaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 28788309 - 28788401
Alignment:
Q  66 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  28788309 atttttcttgtttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 14016927 - 14017036
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  14016927 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 14017026  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  14017027 actgtcatca 14017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 21336650 - 21336742
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  21336650 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 21827949 - 21828041
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  21827949 tttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 17747726 - 17747617
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||| ||| ||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  17747726 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagctttcttatgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 17747627  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  17747626 actgtcatca 17747617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 39191422 - 39191333
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 156  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||   ||||| ||||||||||    
T  39191422 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaataacaaatgattgactgtcat 39191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 40916795 - 40916889
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||   |||||||| ||||||||||  ||||||||||||||||||    
T  40916795 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatgataaaaaaaagactctaaaaatagcaaatgactgactgtcatca 40916889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 18031801 - 18031710
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||  ||||||| |||| ||||||    
T  18031801 tttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatcataaaaagactctaaaaatatggaatgacggactatcatca 18031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 4100278 - 4100431
Alignment:
Q  4 gctccaaatcgtgacacgttttcgac-aatcgtgacacgat----tttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgc 98  Q
    ||||||||||||| |||||||| ||  ||||||||||||||    |||  ||||||||   |||||  |||| |||| |||||||||||||||| |||||    
T  4100278 gctccaaatcgtgtcacgtttttgagtaatcgtgacacgatccctttttttttcttcagtttcttcagttttccttgcttttcttgctgcttaatcttgc 4100377  T
Q  99 ttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgt 153  Q
     |||||||||||||||||||||||||||| || ||||||| |||| |||||||||    
T  4100378 ctgtgaactcaaaaatatcataaaaagactct-aaaatagcgaataactgactgt 4100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 7270305 - 7270241
Alignment:
Q  94 cttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7270305 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 2836761 - 2836702
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 136  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2836761 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 2836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 30065643 - 30065562
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||  |||||| ||| ||||||||    
T  30065643 ttttcttgttgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataacgaatgaatgattgtcatca 30065562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 2837584 - 2837641
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 124  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  2837584 tttttcttgcttttattgctgcttaagcttgcttgtgaactccaaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 25329505 - 25329456
Alignment:
Q  109 aaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  25329505 aaaaatatcataaaaaaactctaaaaatagcgaatgactgactgtcatca 25329456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 7624366 - 7624303
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||| |||||||||||||    
T  7624366 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcctgtgaactcaaaa 7624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 41307405 - 41307445
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  41307405 ataaaaagactctaaaaatagcgaatgactgactgtcatca 41307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21336564 - 21336609
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttt 46  Q
    ||||||| ||||||||||| |||||| |||| ||||||||||||||    
T  21336564 tgtgctctaaatcgtgacatgttttcaacaaccgtgacacgatttt 21336609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 33551425 - 33551385
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaact 107  Q
    ||||||||| |||||||||||||||| ||| ||||||||||    
T  33551425 tttttcttgcttttcttgctgcttaaacttacttgtgaact 33551385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 8276169 - 8276012
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  8276169 tgtgctccaaatcgtgatacgttttcaacaatcatgacacgattttgttttcttcaaaatcttctatttttcttgcttttcttgctgcttgagcttgctt 8276070  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  8276069 gtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26556667 - 26556510
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || ||||||||||||    
T  26556667 tgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgctt 26556568  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26556567 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10431543 - 10431386
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||  |||||| |||| |||||||    
T  10431543 tgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgctt 10431444  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10431443 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 4542229 - 4542074
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    ||||||||||| |||||| ||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  |||||| |||| |||||||||    
T  4542229 tgctccaaatcatgacacattttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 4542130  T
Q  103 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4542129 gaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 2442122 - 2442277
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||  |||||| |||| |||||||||    
T  2442122 tgcttcaaatcgtgatacgttttcaacaatcgtgacacgaatttgctttcctcagaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 2442221  T
Q  103 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  2442222 gaactc-aaaatatcatgaaaatgacacttaaaatagtgaatgactgactgtcatca 2442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 45288047 - 45288138
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45288047 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 45291383 - 45291474
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45291383 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 20081530 - 20081640
Alignment:
Q  48 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20081530 ctttcttcaatttctttgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgact 20081629  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  20081630 gactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 17730071 - 17729973
Alignment:
Q  60 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  17730071 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 9865551 - 9865642
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9865551 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 9080467 - 9080376
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||  |||||||| ||||||||||    
T  9080467 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaattacataaaaagactctaaaaataacgaatgactaactgtcatca 9080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 10344707 - 10344616
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||| |||||| |||||||    
T  10344707 ttttttttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaatagcgaattactgacagtcatca 10344616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 4596833 - 4596924
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||| ||| ||||||| |||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  4596833 tttttcttgcttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 4596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 4694814 - 4694723
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||   ||||||||||| ||||||    
T  4694814 tttttcttacttttcttgctgcttaatcttgcttgtgaactcaaaaatatcatagaaagactctaaaaataacaaatgactgactttcatca 4694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 9273882 - 9274003
Alignment:
Q  5 ctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 104  Q
    ||||||||||||||||||||||   |||||||||| ||||   |||||||||   ||||| | |||||||  |||||||| |||||||||||||||||||    
T  9273882 ctccaaatcgtgacacgttttcagtaatcgtgacatgattcc-ctttcttcagtttcttcaacttttctttcttttcttggtgcttaagcttgcttgtga 9273980  T
Q  105 actcaaaaatatcataaaaagac 127  Q
    |||| ||||||||||||||||||    
T  9273981 actccaaaatatcataaaaagac 9274003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 16164998 - 16164889
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| ||||  ||||||||||||  ||||||||    
T  16164998 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaattacactaaaaataacgaatgact 16164900  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  16164899 gactgtcatca 16164889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 48644725 - 48644616
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  48644725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacattatgaaaatgacactaaaaataaagaatgact 48644627  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  48644626 gactgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 6602730 - 6602621
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| |  ||| |||| || |||||||||||||||||||  |||| || || || | |||||||||||||  ||||||||    
T  6602730 tttcttcaaaatcttgtatttttcatactttccttgttgtttaagcttgcttgtgaact-taaaacattatgaacatgacactaaaaataacgaatgact 6602632  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  6602631 gactgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 48645852 - 48645921
Alignment:
Q  89 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||||||||  |||||||||||||||||||    
T  48645852 ttaagcttgcttgtgaactcaaaac-atcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 37167030 - 37167070
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37167030 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 11826392 - 11826430
Alignment:
Q  120 aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  11826392 aaaaagactctaaaaatagtgcatgactgactgtcatca 11826430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 107
Target Start/End: Original strand, 18563366 - 18563396
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaact 107  Q
    |||||||||||||||||||||||||||||||    
T  18563366 ttttcttgctgcttaagcttgcttgtgaact 18563396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 13450736 - 13450765
Alignment:
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||    
T  13450736 ctaaaaatagtgaatgactgactgtcatca 13450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 15431321 - 15431164
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |||||||    
T  15431321 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgctt 15431222  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15431221 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 15437935 - 15437778
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |||||||    
T  15437935 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgctt 15437836  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15437835 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18910761 - 18910604
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || ||||| ||||||    
T  18910761 tgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagtttgctt 18910662  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18910661 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 33410805 - 33410962
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||| |||||||    
T  33410805 tgtgcttcaaatcgtaacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgctt 33410904  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33410905 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 3798644 - 3798796
Alignment:
Q  6 tccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaa 105  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||||| |||| ||||||||||||    
T  3798644 tccaaatcgtgacacattttcaacaatcgtgacaagattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttgtgaa 3798743  T
Q  106 ctcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3798744 ctc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 5669778 - 5669628
Alignment:
Q  8 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 107  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||| ||||||||||||||    
T  5669778 caaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaact 5669679  T
Q  108 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    | |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5669678 c-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 5669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 5680624 - 5680469
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||| |    
T  5680624 tgctctaaattgtgacacgttttcaacaatcgtgacatgattttgcttttttcaaaatcttctatttttcttgcttttcttgttgtttaagcttgcttat 5680525  T
Q  103 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||| ||||||||   ||||||| | |||||||||    
T  5680524 gaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagtctgtcatca 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5721814 - 5721971
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||| ||    
T  5721814 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgttt 5721913  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  5721914 gtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 5721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 19865486 - 19865643
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||| || ||||| | |||||||||||||||||| ||||||||||||||||||||||||||| |||  ||| || ||||||||||||    
T  19865486 tgtgctccaaatcgtgatacattttcaataatcgtgacacgattttgttttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgctt 19865585  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  19865586 gtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 19865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9717108 - 9716951
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||| || |||| |||||||    
T  9717108 tgtgctctaaattgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttgttgtttaaacttgctt 9717009  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  9717008 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 14571144 - 14571026
Alignment:
Q  40 cgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagt 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       
T  14571144 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 14571045  T
Q  140 gaatgactgactgtcatca 158  Q
    ||||||| ||| |||||||    
T  14571044 gaatgacagaccgtcatca 14571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 12237503 - 12237354
Alignment:
Q  9 aaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||| || ||||||||||||||||||||    
T  12237503 aaattgtgacacattttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgcttgtgaactc 12237404  T
Q  109 aaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
     |||||||||| |||| ||||||||||| ||||||||| ||||| ||||||    
T  12237403 -aaaatatcatgaaaatgacactaaaaacagtgaatgaatgactatcatca 12237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 49269885 - 49269735
Alignment:
Q  8 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 107  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||  ||||    
T  49269885 caaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgctttctttgccgtttaagcttgtttgctaact 49269786  T
Q  108 caaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||| || ||||||||    ||||||||||||||||||    
T  49269785 caaaaatatcataaaaaaactctaaaaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 19861130 - 19861286
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||| |||  |||||| ||||||||||||    
T  19861130 tgtgctccaaatcgtgatacgttttcaacaatcgtgacacaattttgtgttcttcaaaatcttatatttttcttgctttctttgctgtttaagcttgctt 19861229  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 157  Q
    |||||||| |||||||||| |||| ||||||||||| |||||||||||| ||| ||||    
T  19861230 gtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 40617663 - 40617762
Alignment:
Q  9 aaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 108  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40617663 aaatcgtgacacgttttcaacaatcgtggcacgattttgccttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactc 40617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 37104113 - 37104241
Alignment:
Q  30 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||| |||||||||| |||| || |    
T  37104113 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgata 37104211  T
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| | ||||||||||||| ||||||||    
T  37104212 ctaaacacagtgaatgactgagtgtcatca 37104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 18449231 - 18449136
Alignment:
Q  223 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatgatgt 318  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18449231 agtcgtgtgcttggatatctttacttgatgatgttagtgcacttgagatgatgttgtagttgtaagaatgatgtgatgatttgttgatgatgatgt 18449136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 21419070 - 21418987
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 150  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21419070 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagcgaatgactgac 21418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 3718427 - 3718336
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  3718427 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaatagtgaatgagtgactgtcatca 3718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 12782197 - 12782106
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  12782197 tttttcttgcttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 40794283 - 40794200
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 150  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  40794283 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgac 40794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 53093878 - 53093767
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| | ||||| || ||| ||||||| ||||||||||||    
T  53093878 tgtgctccaattcgtgacacgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgctttccttgctgtttaagcttgctt 53093779  T
Q  101 gtgaactcaaaa 112  Q
    ||||||||||||    
T  53093778 gtgaactcaaaa 53093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 29324088 - 29323979
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  29324088 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 29323989  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  29323988 actgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 44809795 - 44809904
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  44809795 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 44809894  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  44809895 actgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 44164090 - 44164001
Alignment:
Q  70 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  44164090 ttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 52007350 - 52007431
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  52007350 ttttcttgctgcttaagcttgcttttgaactcaacaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 15430674 - 15430766
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15430674 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 15437288 - 15437380
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15437288 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 27013321 - 27013229
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  27013321 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 53010377 - 53010458
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  53010377 ttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatca 53010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 27677874 - 27677966
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| ||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  27677874 ttttttttgcttttcttgctgcttaatcttgattgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatca 27677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 24044966 - 24045057
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||| |||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||||    
T  24044966 ttttccttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatca 24045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 34320738 - 34320839
Alignment:
Q  52 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgact 151  Q
    |||||||||||| |||||||| || ||| |||  || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||    
T  34320738 cttcaaaatcttgtatttttcatgctttccttattgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgact 34320837  T
Q  152 gt 153  Q
    ||    
T  34320838 gt 34320839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 56198137 - 56198029
Alignment:
Q  50 ttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||    
T  56198137 ttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactg 56198039  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  56198038 actgtcatca 56198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 19826793 - 19826701
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||| ||| |||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||    
T  19826793 tttttcttgcttttcttgttgcttaatcttacttgtgaactcaaaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 27691933 - 27692025
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||| | ||||||||    
T  27691933 tttttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatcgtaaaaaagactctaaaaatagtgaatgactaattgtcatca 27692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 19820032 - 19819950
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  19820032 ttttcttgctacttaatcttgcttgtgaactcaaaaaatatcataaaaagactttaaaaatagcgaatgactgactgtcatca 19819950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 56194831 - 56194722
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    |||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||| |    
T  56194831 tttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgatt 56194733  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  56194732 gactgtcatca 56194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 35509280 - 35509201
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||||||||  |||||||||||||| ||||    
T  35509280 ttttcttgttgcttaatcttgcttgtgaactcaaaaatatcatataaag--actaaaaataacgaatgactgactgttatca 35509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 47114885 - 47114776
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||  || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  47114885 tttcttcaaaatcttgtatttttcatgttttccttattgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 47114787  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  47114786 gactgtcatca 47114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 15405793 - 15405898
Alignment:
Q  53 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 151  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  15405793 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 15405891  T
Q  152 gtcatca 158  Q
     ||||||    
T  15405892 ttcatca 15405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 33926230 - 33926121
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||| |  |||||  ||| |||||||||| ||   |||||||    
T  33926230 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaagac-atcatgcaaatgacactaaaagtaacaaatgact 33926132  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  33926131 gactgtcatca 33926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 15812973 - 15813036
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| |||||||||||||||||||    
T  15812973 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaa 15813036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 37741471 - 37741512
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactc 108  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  37741471 tttttcttgtttttcttgctgtttaagcttgcttgtgaactc 37741512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 38284375 - 38284415
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  38284375 ataaaaagactctaaaaatagcgaatgactgactgtcatca 38284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 17669475 - 17669447
Alignment:
Q  130 taaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||||||||    
T  17669475 taaaaatagtgaatgactgactgtcatca 17669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 34018659 - 34018699
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  34018659 ataaaaagactctaaaaatagcgaatgacggactgtcatca 34018699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 48416408 - 48416448
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  48416408 ataaaaagactctaaaaatagcgaatgacggactgtcatca 48416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 9e-58; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 45156761 - 45156918
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  45156761 tgtgctccaaatcgtgacacattttcaacaatcgtgacacgattgtgctttcttcaaaatcttctatttttcttgcttttcttgctgctaaagcttgctt 45156860  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||   ||||||||||    
T  45156861 gtgaactcaaaaatatcataaaaagactctaaaaatatagaatgataaactgtcatca 45156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 14421021 - 14420864
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  14421021 tgtgttccaaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttatatttttcttgcttttcttgttgcttaagcttgctt 14420922  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||| ||||||||||||||||||| ||||||||   ||||||  |||||||||||    
T  14420921 gtgaactaaaaaatatcataaaaagactctaaaaatgtggaatgagagactgtcatca 14420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5540838 - 5540995
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||  || |||||||||||| ||||||||    
T  5540838 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacatgattttgcttccttcaaaatcttctatttttcttacttgtcttgctgcttatgcttgctt 5540937  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  5540938 gtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacaaactgtcatca 5540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 18722152 - 18722310
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || ||||||||||     
T  18722152 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgca 18722251  T
Q  100 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  18722252 tgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10663168 - 10663011
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||  |||||||    
T  10663168 tgtgctccaaatcatgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgctt 10663069  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10663068 gtgaactc-aacatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 33878089 - 33878238
Alignment:
Q  9 aaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 108  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| ||| |||||||||||    
T  33878089 aaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaactttcttgtgaactc 33878188  T
Q  109 aaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
     |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33878189 -aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 25595527 - 25595681
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || ||||||||||     
T  25595527 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgca 25595626  T
Q  100 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 154  Q
    ||||||||| |||||||||| |||| ||||||||||| | ||||||||||||||||    
T  25595627 tgtgaactc-aaaatatcatgaaaatgacactaaaaacaatgaatgactgactgtc 25595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 43682640 - 43682798
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |||||||    
T  43682640 tgtgttccaaattgtgacacgttttcaataatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgctt 43682739  T
Q  101 gtgaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
     ||||||| ||||||||||  |||| || ||||||||||||||||||||||||| |||||    
T  43682740 atgaactc-aaaatatcatgaaaaatgatactaaaaatagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 25228169 - 25228049
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||| ||| |||||||||    
T  25228169 tgtgctccaaatcgtgacacgttttcagcaatcgagacacgatttt--tttcttcaaaatcttctatttttcttgtttttcttgcttcttgagcttgctt 25228072  T
Q  101 gtgaactcaaaaatatcataaaa 123  Q
    |||||||||||||||||||||||    
T  25228071 gtgaactcaaaaatatcataaaa 25228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 25592342 - 25592496
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || ||||||||||     
T  25592342 tgtgctccaaatcgggacacattttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgca 25592441  T
Q  100 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 154  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  25592442 tgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 25592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 18826725 - 18826834
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||| |||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  18826725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagtttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 18826824  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  18826825 actgtcatca 18826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 12582372 - 12582218
Alignment:
Q  4 gctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||||||||||||||||||||| | | ||||||||||||||    |||| ||||   |||||  ||||||||| ||||||| |||||||| |||||||||    
T  12582372 gctccaaatcgtgacacgtttttcaataatcgtgacacgatccc-cttttttcagtttcttcagtttttcttgcttttctttctgcttaatcttgcttgt 12582274  T
Q  103 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||| | ||||||    
T  12582273 gaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgattttcatca 12582218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 15662654 - 15662749
Alignment:
Q  223 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatgatgt 318  Q
    |||||||||||||||||| ||||||| |||||| ||||||  || |||| ||||||||||| ||||||||||||||| |||| |||||||||||||    
T  15662654 agtcgtgtgcttggatatatttacttgatgatgctagtgcactttagataatgttgtagttgtaagaatgatgtgatgatttattgatgatgatgt 15662749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 22174782 - 22174891
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||||||||||||||||| ||||| |||| |||||| |||||| |||||| ||    
T  22174782 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaaacatcatgaaaatgacact-aaaataatgaatggct 22174880  T
Q  148 gactgtcatca 158  Q
    |||||||||||    
T  22174881 gactgtcatca 22174891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 30640598 - 30640505
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata--aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| |||||||  ||||||  || |||||||||||||| ||||||||||||    
T  30640598 tttttcttgcatttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaaaagattcttaaaatagtgaatgattgactgtcatca 30640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 14589707 - 14589816
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| ||  ||||||||||||||||||| |||| ||||| |||| ||||||||||||| |||||||||    
T  14589707 tttcttcaaaatcttgtatttttcatgctttccttgttgtgtaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataatgaatgact 14589805  T
Q  148 gactgtcatca 158  Q
     ||| ||||||    
T  14589806 aactatcatca 14589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 19793019 - 19792926
Alignment:
Q  67 tttttcttggttttcttgctgcttaagctt-gcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||| | |||||||| || |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  19793019 tttttctagcttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatca 19792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 23612645 - 23612569
Alignment:
Q  82 ttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||| ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||    
T  23612645 ttgctgtttaaacttgcttgtgaactcaaaa-tctcatcaaaatgacactaaaaatagtgaatgactgactgtcatca 23612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 5981150 - 5981220
Alignment:
Q  88 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 158  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  5981150 cttaaacttgcttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacggactgtcatca 5981220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 38249248 - 38249312
Alignment:
Q  48 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    ||||||||||||||||  | ||||| || ||| ||||||| ||||||||||||||||| ||||||    
T  38249248 ctttcttcaaaatctttaacttttcatgttttccttgctgtttaagcttgcttgtgaattcaaaa 38249312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 20261686 - 20261647
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  20261686 taaaaagactctaaaaatagtgtatgactgactgtcatca 20261647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 21048316 - 21048277
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21048316 taaaaagactctaaaaatagtgtatgactgactgtcatca 21048277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 16953038 - 16952998
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  16953038 ataaaaagactctaaaaatagcgaatgacggactgtcatca 16952998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 29644151 - 29644308
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||| ||||||    
T  29644151 tgtgctccaaatcgtgatacgttttcaacaatcgtgacacgattttactttcttcaaagtcttctatttttcttgctttttttgctgcttaagtttgctt 29644250  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||| ||| ||||   ||||||| |||||||||||    
T  29644251 gtgaactcaaaaatatcataaaaagactctataaatgtggaatgacagactgtcatca 29644308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 2793456 - 2793299
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  || ||| |||| |||||||    
T  2793456 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttactgtttaaacttgctt 2793357  T
Q  101 gtgaactcaaaaatatca-taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  2793356 gtgaactc-aaaatatcattaaaaagactctaaaaatagtgaacgactgactgtcatca 2793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 1951190 - 1951345
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||| |||| |||||||||    
T  1951190 tgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttctttgaaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 1951289  T
Q  103 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| || ||||||| |||| || ||| |||||||||||||||||||||||||||    
T  1951290 gaactc-aagatatcatgaaaatgatacttaaaatagtgaatgactgactgtcatca 1951345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 49499413 - 49499568
Alignment:
Q  3 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 102  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| || |||||||||| |||    
T  49499413 tgctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgt 49499512  T
Q  103 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||||||||| ||||  |||||||||| || |||||||||||||||||||    
T  49499513 gaactc-aaaatatcatgaaaataacactaaaaacagcgaatgactgactgtcatca 49499568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 41059135 - 41059234
Alignment:
Q  60 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  41059135 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 2404809 - 2404722
Alignment:
Q  71 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  2404809 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatattataaaaagactctaaaaatagcgaatgactgactgtcatca 2404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 45961598 - 45961707
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||    
T  45961598 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaatagcaaatgactg 45961697  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  45961698 actgtcatca 45961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 27537104 - 27537212
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| ||||||||||||||  |||||||||  ||||||||    
T  27537104 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaatagcaaatgactg 27537203  T
Q  149 actgtcatc 157  Q
    |||||||||    
T  27537204 actgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34733106 - 34733217
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||| ||||| |||||| ||||||||| ||||||||| ||||||||||||||||| | ||||| || ||| ||| ||| |||| |||||||    
T  34733106 tgtgctccaaatcctgacatgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgatttccttactgtttaatcttgctt 34733205  T
Q  101 gtgaactcaaaa 112  Q
    ||||||||||||    
T  34733206 gtgaactcaaaa 34733217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 21019287 - 21019367
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  21019287 ttttcttgctgcttaagcttggttgcgaactcaaaaatatcat-aaaagactctaaaaatagcgaatgactgactgtcatca 21019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 42021812 - 42021721
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  42021812 tttttcttgcttttattgctgcttaaacttgcttgtgaactcagtaatattataaaaagactctaaaaatagcgaatgattgactgtcatca 42021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 21108302 - 21108393
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||| |||||| ||||||| |||  ||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  21108302 tttttcttgcttttcttgcagcttaatcttgcttttgagttcaaaaatatcataagaagactctaaaaagagcgaatgactgactgtcatca 21108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 31204123 - 31204014
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  31204123 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 31204025  T
Q  148 gactgtcatca 158  Q
    |||| ||||||    
T  31204024 gactatcatca 31204014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 6071791 - 6071854
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 112  Q
    ||||||||||||||| |||||||| || |||||||| || ||||||||||||||||||||||||    
T  6071791 tttcttcaaaatcttgtatttttcatgtttttcttgttgtttaagcttgcttgtgaactcaaaa 6071854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 47708778 - 47708817
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  47708778 taaaaagactctaaaaatagtgaatgactgactgtcatca 47708817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 22460406 - 22460443
Alignment:
Q  121 aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22460406 aaaagactctaaaaatagtgaatgactgactgtcatca 22460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 45940661 - 45940621
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  45940661 ataaaaagactctaaaaatagcgaatgactgactgtcatca 45940621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 3088696 - 3088735
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  3088696 taaaaagactctaaaaatagtgcatgactgactgtcatca 3088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 22454290 - 22454319
Alignment:
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||    
T  22454290 ctaaaaatagtgaatgactgactgtcatca 22454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 49147150 - 49147113
Alignment:
Q  121 aaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  49147150 aaaagactctaaaaatagtgaatgattgactgtcatca 49147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 28110323 - 28110283
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  28110323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 28110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 37184743 - 37184783
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  37184743 ataaaaagactctaaaaatagcgaatgacggactgtcatca 37184783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 25869992 - 25869835
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||  ||| || |||| ||| |||    
T  25869992 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaactttctt 25869893  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25869892 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 25873360 - 25873203
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||  ||| || |||| |||||||    
T  25873360 tgtgctccaaatcatgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaacttgctt 25873261  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25873260 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 16788542 - 16788389
Alignment:
Q  4 gctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtg 103  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  16788542 gctctaaatcgtgacacgttttcaacaatcgtgacacgattgtgctttcatcaaaatcttatatttttcttgcttttcttgttgcttaagcttgcttgtg 16788443  T
Q  104 aactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||| ||||||  ||||||||||  ||||||||||||||||||    
T  16788442 aactcaaaattatcat-aaaagattctaaaaatagcaaatgactgactgtcatca 16788389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26358829 - 26358672
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||  |||||| |||| ||| |||    
T  26358829 tgtgctccaaatcgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgtcttctttgctgtttaaacttcctt 26358730  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26358729 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 36809278 - 36809435
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  ||| || |||| |||||||    
T  36809278 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgctt 36809377  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36809378 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 38006129 - 38006286
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||  ||| || ||||||||| ||    
T  38006129 tgtgctccaaatcgtgacacgttttcgacaatcgtcacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgttt 38006228  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| ||||    
T  38006229 gtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtaatca 38006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 25139883 - 25140040
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||| | |||||||| |||    
T  25139883 tgtgctccaaatcgtgacacgttgtcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgctttctttgccgtttaagcttactt 25139982  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||| || |||||| |   |||||||||||||||||||    
T  25139983 gtgaactcaaaaatatcataaaaaaactctaaaattgtggaatgactgactgtcatca 25140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 25821760 - 25821922
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 99  Q
    |||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||| || |||||||||||    
T  25821760 tgtgttccaaatcgtgacaccttttcaacaatcttgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgct 25821859  T
Q  100 tgtgaactcaaaa---atatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||   ||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  25821860 tgtgaactcaaaatatatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 25821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 30275537 - 30275691
Alignment:
Q  4 gctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtg 103  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||| || |||| |||| |||||    
T  30275537 gctccaaatcgtgacacgttttcaacaatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgtttgtg 30275636  T
Q  104 aactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    || || |||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  30275637 aattc-aaaatatcatgaaaatgacactaaaaatattgaatgactgactatcatca 30275691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 15466298 - 15466170
Alignment:
Q  30 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 128  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||    
T  15466298 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgaca 15466200  T
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||| ||||||||    
T  15466199 ctaaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 10600042 - 10599951
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10600042 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatca 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 38014745 - 38014636
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  38014745 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 38014646  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  38014645 actgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 3874573 - 3874482
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3874573 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 31430529 - 31430638
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 148  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||     
T  31430529 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgacta 31430628  T
Q  149 actgtcatca 158  Q
    ||||||||||    
T  31430629 actgtcatca 31430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 5665905 - 5665830
Alignment:
Q  83 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  5665905 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgactgtcatca 5665830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 43722985 - 43722904
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  43722985 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 43722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 13972725 - 13972813
Alignment:
Q  70 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  13972725 ttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 13972813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 5105032 - 5104953
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||||    
T  5105032 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaaactctaaaa--agtgaatgactgactgtcatca 5104953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 13136853 - 13136764
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 156  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||   ||||||||||||||||    
T  13136853 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaatgactctaaaaataacaaatgactgactgtcat 13136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 29439723 - 29439597
Alignment:
Q  30 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 128  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| |||  |||||| |||| |||||||||||||||   || ||||| |||| ||||    
T  29439723 aatcgtgacacgattttgctttcttcgaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactc---aacatcatgaaaatgaca 29439627  T
Q  129 ctaaaaatagtgaatgactgactgtcatca 158  Q
    |||||| ||  ||||||| |||||||||||    
T  29439626 ctaaaattaacgaatgacggactgtcatca 29439597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 36985626 - 36985732
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    |||||||||||||||||||||||  || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  36985626 tttcttcaaaatcttctattttttctgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgact 36985724  T
Q  148 gactgtca 155  Q
    ||||||||    
T  36985725 gactgtca 36985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 6826055 - 6825974
Alignment:
Q  77 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||| |||  |||||| ||||||||||||    
T  6826055 ttttcttgatgcttaatcttgcttgtgaactcaaaaatatcataaaaagactttaaatataacgaatgattgactgtcatca 6825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 45453160 - 45453051
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| ||| |||||||||  ||||||||    
T  45453160 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgaccctaaaaataaagaatgact 45453062  T
Q  148 gactgtcatca 158  Q
    || ||||||||    
T  45453061 gattgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 31428340 - 31428414
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaa 123  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| ||||||||||||||||||| ||||||||||    
T  31428340 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaattatcataaaa 31428414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 45456409 - 45456300
Alignment:
Q  49 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    ||||||||||||||| |||||||| || |||  ||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||| ||    
T  45456409 tttcttcaaaatcttgtatttttcatgctttctttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatggct 45456311  T
Q  148 gactgtcatca 158  Q
    || ||||||||    
T  45456310 gattgtcatca 45456300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 9189532 - 9189572
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  9189532 ataaaaagactctaaaaatagcgaatgactgactgtcatca 9189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 37280556 - 37280596
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37280556 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37280596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 43208769 - 43208809
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  43208769 ataaaaagactctaaaaatagcgaatgactgactgtcatca 43208809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 31586785 - 31586823
Alignment:
Q  120 aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  31586785 aaaaagactctaaaaatagcgaatgactgactgtcatca 31586823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 1504290 - 1504318
Alignment:
Q  130 taaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||||||||    
T  1504290 taaaaatagtgaatgactgactgtcatca 1504318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 1507492 - 1507520
Alignment:
Q  130 taaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||||||||||||||||||||||    
T  1507492 taaaaatagtgaatgactgactgtcatca 1507520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 8887882 - 8887842
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  8887882 ataaaaagactctaaaaatagcgaatgacggactgtcatca 8887842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 25957323 - 25957363
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  25957323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 25957363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 40780698 - 40780658
Alignment:
Q  118 ataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||||| |||||||||| |||||| ||||||||||||    
T  40780698 ataaaaagactctaaaaatagcgaatgattgactgtcatca 40780658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 61747 - 61597
Alignment:
Q  8 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||  ||| || |||||||||||||||||||    
T  61747 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttctttaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaact 61648  T
Q  108 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    | |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  61647 c-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 61597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 246232 - 246350
Alignment:
Q  40 cgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagt 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       
T  246232 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 246331  T
Q  140 gaatgactgactgtcatca 158  Q
    ||||||| ||| |||||||    
T  246332 gaatgacagaccgtcatca 246350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 291120 - 290974
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  ||| || |||| |||||||    
T  291120 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgctt 291021  T
Q  101 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 147  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||    
T  291020 gtgaact-taaaatatcatgaaaatgacactaaaaatagtgaatgact 290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 197358 - 197242
Alignment:
Q  42 attttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtga 141  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  197358 attttactttcttcaaaatcttctatttttcttgcttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgga 197259  T
Q  142 atgactgactgtcatca 158  Q
    ||||| |||||||||||    
T  197258 atgacagactgtcatca 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 4654 - 4563
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4654 tttttcttgattttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26402 - 26277
Alignment:
Q  1 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         |||| ||||||||| | ||||||    
T  26402 tgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatt---------tttcatgctgcttatgtttgctt 26312  T
Q  101 gtgaactcaaaaatatcataaaaagacactaaaaa 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  26311 gtgaactcaaaaatatcataaaaagactctaaaaa 26277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 969 - 1060
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  969 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaagtagcgaatgactgactgtcatca 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 4329 - 4420
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  4329 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 4420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 11459 - 11550
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  11459 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 11550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 18588 - 18463
Alignment:
Q  34 gtgacacgattttgctttcttcaaaa-tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 131  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||  ||| || |||||||||| ||||||||| |||||||||| |||| |||||||    
T  18588 gtgacacgtttttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactc-aaaatatcatgaaaatgacacta 18490  T
Q  132 aaaatagtgaatgactgactgtcatca 158  Q
    |||| ||||||||||||||||||||||    
T  18489 aaaacagtgaatgactgactgtcatca 18463  T

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Target: scaffold0381 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 6462 - 6554
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  6462 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

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Target: scaffold0520 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 4790 - 4880
Alignment:
Q  68 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    |||||||  |||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  4790 ttttctttctttttttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 4880  T

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Target: scaffold0045 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 89071 - 88965
Alignment:
Q  52 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgac 150  Q
    ||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||||    
T  89071 cttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactgac 88973  T
Q  151 tgtcatca 158  Q
    ||||||||    
T  88972 tgtcatca 88965  T

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Target: scaffold1993 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 1136 - 1045
Alignment:
Q  67 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 158  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  1136 tttttcttgcttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaat-gtgaaatgactgactgtcatca 1045  T

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Target: scaffold1684 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 369 - 474
Alignment:
Q  53 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 151  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  369 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 467  T
Q  152 gtcatca 158  Q
     ||||||    
T  468 ttcatca 474  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 7016 - 7055
Alignment:
Q  119 taaaaagacactaaaaatagtgaatgactgactgtcatca 158  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  7016 taaaaagactctaaaaatagtgaatgactgactgtcatca 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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