View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12010_high_3 (Length: 337)

Name: NF12010_high_3
Description: NF12010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12010_high_3
NF12010_high_3
[»] chr8 (2 HSPs)
chr8 (20-321)||(5788808-5789109)
chr8 (20-260)||(33186536-33186776)
[»] chr2 (4 HSPs)
chr2 (20-278)||(42898081-42898339)
chr2 (28-251)||(38895950-38896173)
chr2 (49-251)||(5435530-5435732)
chr2 (20-71)||(40040779-40040830)
[»] chr1 (9 HSPs)
chr1 (31-290)||(4160145-4160407)
chr1 (20-285)||(36989116-36989381)
chr1 (20-149)||(12804596-12804725)
chr1 (20-149)||(12774849-12774978)
chr1 (214-290)||(28496388-28496464)
chr1 (184-272)||(31644310-31644398)
chr1 (214-290)||(50789098-50789174)
chr1 (20-275)||(42286903-42287158)
chr1 (20-71)||(28496191-28496242)
[»] chr4 (2 HSPs)
chr4 (28-257)||(30518241-30518470)
chr4 (20-137)||(22085591-22085708)
[»] chr3 (3 HSPs)
chr3 (142-251)||(12105921-12106030)
chr3 (142-251)||(46987917-46988026)
chr3 (39-80)||(52248459-52248500)
[»] chr7 (1 HSPs)
chr7 (195-263)||(40749188-40749256)


Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 20 - 321
Target Start/End: Original strand, 5788808 - 5789109
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5788808 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 5788907  T
Q  120 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5788908 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 5789007  T
Q  220 ctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttttttgctagtaaactctttggtgacatagctataa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5789008 ctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttttttgctagtaaactctttggtgacatagctataa 5789107  T
Q  320 ct 321  Q
    ||    
T  5789108 ct 5789109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 260
Target Start/End: Complemental strand, 33186776 - 33186536
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||||||||| ||||| || |||||||||||||| ||||||||||| |||||  ||||||| || || || ||||| ||||| ||||| ||||| || ||    
T  33186776 catatttcttagaacatttctcacatttccactttttctcaccatgttttctacaaaagtgcttttttatcccagttaaatcacctaaagctctagaagg 33186677  T
Q  120 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 219  Q
    ||||||||| |||||||| ||||| ||||| ||||| ||  | || ||||| |||||||||| ||||||| |||  |||||||||| |||||| ||||||    
T  33186676 atcatgatgaacacaagtaggttcaggacaaacataaacccttttcctaatttctttacttgatctttgtctcagtttccatggtagattatgtcctctt 33186577  T
Q  220 ctgtgaagttgaagattttgatctctttgaaaccctttgtt 260  Q
    || || ||||||||||| |||||||||||||||||||||||    
T  33186576 ctatgtagttgaagattctgatctctttgaaaccctttgtt 33186536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 42898339 - 42898081
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||| ||||| || ||||| ||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||||| |  ||||| || |||||||||||    
T  42898339 catacttcttagagcacttgtcacatttccacttcttctcaccgtgctttctgcagaagtgcttcttgataccagttaggtcccccaaggctcttgatgg 42898240  T
Q  120 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 219  Q
     ||||| ||||||||||||||||||||||| ||||| |||||||| || ||||| || ||||||||||| |||||||||||||| ||||| || ||||||    
T  42898239 gtcatggtgcacacaagttggttctggacacacataaactttcttccttatctcattgcttgttctttgcttcaacttccatggcaaattgtgtcctctt 42898140  T
Q  220 ctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaa 278  Q
     | |||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||    
T  42898139 ttatgaagttgaagattctgatctctttgaaatcctttgttacagatctcacaaatgaa 42898081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 38895950 - 38896173
Alignment:
Q  28 tttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatggatcatgat 127  Q
    ||||| ||||| ||||| ||||||||||||||||| || || ||  ||||||| ||||| || ||||| ||||| || || || ||||| |||| || ||    
T  38895950 tttgagcacttctcacacttccacttcttctcaccgtgtttcctacaaaagtgcttctttatcccagttaaatctcccaaagcccttgaaggatgattat 38896049  T
Q  128 gcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctcttctgtgaag 227  Q
    | ||||| ||    |||||||| ||||| ||| |||| || || |||||||||||||||||||||| |||||| ||||  ||||| || | ||  |||||    
T  38896050 gaacacatgtcttctctggacacacatacactctcttccttatttctttacttgttctttgtttcagcttccaaggtaggttatgtccacgtcgatgaag 38896149  T
Q  228 ttgaagattttgatctctttgaaa 251  Q
    ||||||||||||||| ||||||||    
T  38896150 ttgaagattttgatccctttgaaa 38896173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 5435530 - 5435732
Alignment:
Q  49 cacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatggatcatgatgcacacaagttggttctggac 148  Q
    |||||||||||||| ||||| ||  ||||||| ||||| || || || ||||| || || || ||||| |||| || ||| ||||   ||   |||||||    
T  5435530 cacttcttctcaccgtgcttcctacaaaagtgcttctttatccctgttaaatctcccaaagcccttgaaggatgattatgaacacggattttctctggac 5435629  T
Q  149 atacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctcttctgtgaagttgaagattttgatctctttg 248  Q
    | ||||| ||| |||| || || | |||||||||||||||||||| |||||| ||||  ||||| || | ||  |||||||||||||||||||| |||||    
T  5435630 acacatacactctcttccttatttttttacttgttctttgtttcagcttccaaggtaggttatgtccacgtcgatgaagttgaagattttgatccctttg 5435729  T
Q  249 aaa 251  Q
    |||    
T  5435730 aaa 5435732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 40040830 - 40040779
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttct 71  Q
    |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||    
T  40040830 catatttcttagaacacttatcacacttccacttcttctcaccgtgctttct 40040779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 290
Target Start/End: Complemental strand, 4160407 - 4160145
Alignment:
Q  31 gaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatggatcatgatgca 130  Q
    ||||| || ||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||||| |  || || | ||| ||||| || ||||| || |    
T  4160407 gaacatttctcacacttccacttcttctcaccgtgcttcctgaaaaagtgcttcttgattccagttaggtcaccaagtgcccttgaagggtcatggtgaa 4160308  T
Q  131 cacaagttggttctggacatacatatactttctttctaatctctttacttg----ttctttgtttcaacttccatggtaaattatgacctcttctgtgaa 226  Q
    |||| ||||| |||||||| ||||||||||||||||| ||   |||  |||    ||||||  || | ||||||||| |||||||| |||||  | ||||    
T  4160307 cacatgttggctctggacaaacatatactttctttcttat-gatttcattgacgtttcttttctttagcttccatggcaaattatgtcctctcttatgaa 4160209  T
Q  227 gttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttttttgc 290  Q
    | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| ||||    
T  4160208 gctgaagattttgatctctttgaaaacctttgttacaaatctcacaaatgaacctgtttgttgc 4160145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 36989381 - 36989116
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||||||||  ||||||| || || |||||||| | ||| || | ||||||||  ||    
T  36989381 catatttcttagaacacttatcacatttccactttttctcaccatgctttctacaaaagtgctttttaattccagtaagatcaccaagtgctcttgcagg 36989282  T
Q  120 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 219  Q
     | ||| || ||||| |  ||||| ||||| ||||| ||  |||||||||| |||  ||| ||||||||||| | |||||| || || || || ||||||    
T  36989281 gttatggtgtacacatgaaggttcaggacaaacataaaccctctttctaatttctgcactagttctttgttttagcttccaaggcaagttgtgtcctctt 36989182  T
Q  220 ctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttt 285  Q
    | ||| |||||||||||||| ||||||||||| || ||||| || || ||||||| ||| ||||||    
T  36989181 cggtgcagttgaagattttggtctctttgaaaacccttgttacatatttcacatacgaatctgttt 36989116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 12804596 - 12804725
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| |  || || |  || ||||| ||    
T  12804596 catatttcttagaacacttttcacatttccactttttctcaccatgctttctagaaaagtgcttcttaattccagtgaggtcaccaagagcccttgaagg 12804695  T
Q  120 atcatgatgcacacaagttggttctggaca 149  Q
     ||||| || ||||| ||||||||||||||    
T  12804696 gtcatggtgaacacatgttggttctggaca 12804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 12774978 - 12774849
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||| ||||| |||||||||||||| ||||| || |||||||||||||||||  || |||||||||| |||||||| |  || || |  || ||||| ||    
T  12774978 catacttcttagaacacttttcacacttccattttttctcaccatgctttctaaaatagtgtttcttaattccagtgaggtcaccaagagcccttgaagg 12774879  T
Q  120 atcatgatgcacacaagttggttctggaca 149  Q
     ||||| || ||||| ||||||||||||||    
T  12774878 gtcatggtgaacacatgttggttctggaca 12774849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 28496388 - 28496464
Alignment:
Q  214 cctcttctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttttttgc 290  Q
    |||||||| || |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| |||||| ||||    
T  28496388 cctcttctatgtagttgaaggttttgatctctttggaaccctttgttgcatatttcacagatgaatctgtttgttgc 28496464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 31644310 - 31644398
Alignment:
Q  184 ctttgtttcaacttccatggtaaattatgacctcttctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcaca 272  Q
    ||||| ||||||||||||||||  ||||| ||||| || || || || || ||||||||||||||||| || |||||||||||||||||    
T  31644310 ctttgcttcaacttccatggtaggttatgtcctctcctatgtagctgtaggttttgatctctttgaaaacccttgttgcagatctcaca 31644398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 50789098 - 50789174
Alignment:
Q  214 cctcttctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatatgaacctgttttttgc 290  Q
    |||||||||||||| || |||||||| |||||||| |||||||||||||| | |||||| || ||||||||| ||||    
T  50789098 cctcttctgtgaagctgtagattttgctctctttggaaccctttgttgcatacctcacaaataaacctgtttgttgc 50789174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 275
Target Start/End: Complemental strand, 42287158 - 42286903
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||| |  || || || || || |||||||| | ||| ||||| |||||||| ||    
T  42287158 catatttctttgagcatttttcacatttccacttcttctcaccgtgcttacgagagaaatgctttttaattccagttagatctcctaaagctcttgaagg 42287059  T
Q  120 atcatgatgcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctctt 219  Q
     || ||||| || || || || || ||||| | ||| || ||  | ||   ||||||  | |   |||| || | |||||| || | ||| || ||||||    
T  42287058 gtcgtgatggacgcatgtgggctcaggacacaaataaacctttctccttggctctttgttggacttttgctttagcttccaaggaagattgtgtcctctt 42286959  T
Q  220 ctgtgaagttgaagattttgatctctttgaaaccctttgttgcagatctcacatat 275  Q
    || ||||||||||||||||| || |||||||||||||| ||||| | |||||||||    
T  42286958 ctatgaagttgaagattttgctccctttgaaaccctttattgcaaacctcacatat 42286903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 28496191 - 28496242
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttct 71  Q
    ||||||| || ||||| |||||||||||||||||||||||||| ||||||||    
T  28496191 catattttttggaacatttttcacatttccacttcttctcaccgtgctttct 28496242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 30518241 - 30518470
Alignment:
Q  28 tttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatggatcatgat 127  Q
    ||||| ||||| ||||| ||||||||||| ||||||||||||||  ||||||| || || || ||||| || || || | ||| ||||| |||||||| |    
T  30518241 tttgagcacttctcacacttccacttcttttcaccatgctttctacaaaagtgcttttttatcccagttaagtcaccaagtgcccttgaaggatcatggt 30518340  T
Q  128 gcacacaagttggttctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctcttctgtgaag 227  Q
    | |||||||||   |||||||| ||||| ||| ||||  | || |||||  ||||||| || || | ||||||||| | |||||| || | ||| || ||    
T  30518341 ggacacaagttttctctggacacacataaactctcttctttatttctttgtttgttctctgcttaagcttccatggaagattatgtccacgtctatgcag 30518440  T
Q  228 ttgaagattttgatctctttgaaacccttt 257  Q
    |||||||||||||||||||||||| |||||    
T  30518441 ttgaagattttgatctctttgaaaaccttt 30518470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 22085591 - 22085708
Alignment:
Q  20 catatttctttgaacacttttcacatttccacttcttctcaccatgctttctggaaaagtgtttcttgattccagtcaaatcccctaatgctcttgatgg 119  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||   | | |||||||| ||||| |||||||| || || ||||| || ||    
T  22085591 catatttcttggaacacttttcacacttccacttcttctcaccatgttttctactataatgtttctttattcctgtcaaatctcccaaagctctagaagg 22085690  T
Q  120 atcatgatgcacacaagt 137  Q
     ||||| |||||||||||    
T  22085691 ttcatggtgcacacaagt 22085708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 251
Target Start/End: Complemental strand, 12106030 - 12105921
Alignment:
Q  142 tctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctcttctgtgaagttgaagattttgat 241  Q
    |||||||| ||||| ||| |||| || || |||||||||||||||||||||| |||||| ||||  ||||  || | ||  |||||||||||||||||||    
T  12106030 tctggacacacatacactctcttccttatttctttacttgttctttgtttcagcttccaaggtaggttatatccacgtcgatgaagttgaagattttgat 12105931  T
Q  242 ctctttgaaa 251  Q
      ||||||||    
T  12105930 tcctttgaaa 12105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 46987917 - 46988026
Alignment:
Q  142 tctggacatacatatactttctttctaatctctttacttgttctttgtttcaacttccatggtaaattatgacctcttctgtgaagttgaagattttgat 241  Q
    |||||||| ||||| ||| |||| || || |||||||||||||||||||||| |||||| ||||  ||||  || | ||  |||||||||||||||||||    
T  46987917 tctggacacacatacactctcttccttatttctttacttgttctttgtttcagcttccaaggtaggttatatccacgtcgatgaagttgaagattttgat 46988016  T
Q  242 ctctttgaaa 251  Q
      ||||||||    
T  46988017 tcctttgaaa 46988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 52248459 - 52248500
Alignment:
Q  39 ttcacatttccacttcttctcaccatgctttctggaaaagtg 80  Q
    |||||||||||| ||||||||||||||||||||  |||||||    
T  52248459 ttcacatttccatttcttctcaccatgctttctacaaaagtg 52248500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 40749256 - 40749188
Alignment:
Q  195 cttccatggtaaattatgacctcttctgtgaagttgaagattttgatctctttgaaaccctttgttgca 263  Q
    |||||||||||  || ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||    
T  40749256 cttccatggtaggttgtgacctcttctatgaagctgaagattctgatctctttggaatcctttgttgca 40749188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University