View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12014_low_5 (Length: 205)
Name: NF12014_low_5
Description: NF12014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12014_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 44174202 - 44174388
Alignment:
| Q |
2 |
aaaataagacccaagttttgagggatcttgtccgatcgactccttcacacaaaggtgtttctccctttgggaccaccccctacaatgccatccctccttt |
101 |
Q |
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| T |
44174202 |
aaaataagacccaagttttgagggatcttgtccagtcgactccttcacacaaaggtgtttctccctttgggaccaccccctacaatgccatccctccttt |
44174301 |
T |
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| Q |
102 |
gagagtactttcatcgcctcatatagatgcaaatgaagatgcagggctgctcaaagtcaaagacatacctttgagtggattttctcc |
188 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44174302 |
gacggtactttcatcgcctcatatagatgcaaatgaagatgcagggctgctcaaagtcaaagacatacctttgagtggattttctcc |
44174388 |
T |
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