View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12017_high_3 (Length: 240)
Name: NF12017_high_3
Description: NF12017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12017_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 32669064 - 32669285
Alignment:
| Q |
18 |
ccttcgtcgtcgagtcgaatggcatcgaacgaagcgtcatcgtcgttgacgttgtaagagtcaccgtcgtcgtgatgtaaggttccggcttctgacgccg |
117 |
Q |
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| T |
32669064 |
ccttcgtcgtcgagtcgaatggcatcgaacgaagcgtcatcgtcgttgacgttgtaagagtcaccgtcgtcgtgatgtaaggttccggcttctgacgccg |
32669163 |
T |
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| Q |
118 |
ctggaggtgaggcggcggtgggaaaggacatcgttttggtaccggcgcgaaatgcattgaaagttaaaatgcgatttggttttttaaatgaaccagcggg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32669164 |
ctggaggtgaggcggcggtgggaaaggacatcgttttggtaccggcgcgaaatgcattgaaagttgaaatgcgatttggttttttaaatgaaccagcggg |
32669263 |
T |
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| Q |
218 |
aaggaagattaagagcctgttt |
239 |
Q |
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|||||||||||||| ||||||| |
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| T |
32669264 |
aaggaagattaagatcctgttt |
32669285 |
T |
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