View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12018_low_37 (Length: 280)
Name: NF12018_low_37
Description: NF12018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12018_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 40253514 - 40253765
Alignment:
| Q |
19 |
gcaagttgggttgagaaaactgtgtattttttacattaacaaatgtttaacttgttttgattgattccttaattttcttattttacactttactcactta |
118 |
Q |
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| T |
40253514 |
gcaagtttgtttgagaaaactgtgtattttttacattaacaaatgttttacttgttttgattgattccttaattttcttattttacactttactcactta |
40253613 |
T |
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| Q |
119 |
ggaaattcatatatttcaatgaatcaatagtaaataaattccatatggataagattcctaacaatcactaatgaggttactttttcttaattttcatgga |
218 |
Q |
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| T |
40253614 |
ggaaattcatatatttcaatgaatcaatagtaaataaattccatatggataagattcctaacaatcactaatgaggttactttttcttaattttcatgga |
40253713 |
T |
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| Q |
219 |
aaggatcaattcccactttctttgtctccaattttctccaattagatctctg |
270 |
Q |
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| T |
40253714 |
aaggatcaattcccactttctttgtctccaattttctccaattagatctctg |
40253765 |
T |
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