View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12019_low_11 (Length: 413)
Name: NF12019_low_11
Description: NF12019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12019_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 18 - 410
Target Start/End: Complemental strand, 7750609 - 7750217
Alignment:
| Q |
18 |
aactgtctagacttaataatctcaatcttcgcgcaaaccatctcaccggtacaataccaaattccttgagcaagctgacaaaccttaacctccttgtgct |
117 |
Q |
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| T |
7750609 |
aactgtctagacttaataatctcaaccttcgcgcaaaccatctcaccggtacaataccgaattccttgagcaagctgacaaaccttaacctccttgtgct |
7750510 |
T |
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| Q |
118 |
ggacacaaacagacttagtggaccaattccatcgttcttgggccgtttaaaaaacctcaccttaatcgtcctagcaaataaccgtttttctggcccaatt |
217 |
Q |
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| T |
7750509 |
cgacacaaacagacttagtggaccaattccatcgttcttgggccgtttaaaaaagctcaccttaatcgtcctagcaaataaccgtttttctggcccaatt |
7750410 |
T |
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| Q |
218 |
caggcctctctcggaaacctgccggctctgtctcttcttgatgtctcccataacaagctcactggttcaatacccaaattccccaagagcctaacaaacc |
317 |
Q |
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| T |
7750409 |
ccggcctctctcggaaacctgccggctctgtctcttcttgatgtctcccataacaagctcactggttcaatacccgaattccccaagagcctaacaaacc |
7750310 |
T |
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| Q |
318 |
ttgatgttagtttcaataggctttgtggcccaattcccaaaaggtggttcaattttgattcacatgttttttatcataataaatgcctctgtg |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
7750309 |
ttgatgttagtttcaataggctttgtggcccaattcccaaaaggtggttcaattttgattcacatgttttttatcataataaatgcctttgtg |
7750217 |
T |
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