View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_high_106 (Length: 223)
Name: NF12023_high_106
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_high_106 |
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Alignment Details
Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 38379235 - 38379099
Alignment:
| Q |
14 |
cacagacagcgtttcaagccaatgctaatctattattaaaacaaagagccatagttaattcttcagcatcaaacacaacgaattatcattctcttccaca |
113 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
38379235 |
cacaaacagcgtttcaagccaatgctaatctattattaaaacaaagagccatagttaattcttcagcatcaaacacaacgaattatcatcatcttccaca |
38379136 |
T |
|
| Q |
114 |
aattttatgtttgaagcaattttgaattaaacaaaca |
150 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
38379135 |
aattttatgtttgaagcaattttgaattaaacaaaca |
38379099 |
T |
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