View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_high_112 (Length: 207)
Name: NF12023_high_112
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_high_112 |
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Alignment Details
Target: chr6 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 1824129 - 1824301
Alignment:
| Q |
20 |
atatagtgtgaaagcaatcattcacattaagttttttcggtttgattagcaaatatatagcatagtttttgcattaggatgaaaaatccataagtttcaa |
119 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1824129 |
atatagtgtgaaagcaatcattcacattaacttttttcggtttgattagcaaatatatagcatagtttttgcattaggatgaaaaatccataagtttcaa |
1824228 |
T |
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| Q |
120 |
tgaaacaatgatatatcaaacactctctcttacatttcctttatgttatctgttggattttttgtcatctgtg |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1824229 |
tgaaacaatgatatatcaaacactctctcttacatttcctttatgttatctgttggattttttgtcatctgtg |
1824301 |
T |
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