View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_high_46 (Length: 339)
Name: NF12023_high_46
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_high_46 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 3 - 339
Target Start/End: Original strand, 33195257 - 33195593
Alignment:
| Q |
3 |
acaagcaacttttaaatattataggatttaataattgtaaaatgggcatgaaatcatgatccgcataataagccgtgggacatgtatatttgtaaaaata |
102 |
Q |
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| T |
33195257 |
acaagcaacttttaaatattataggatttaataattgtaaaatgggcatgaaatcatgatccgcataataagctgtgggacatgtatatttgtaaaaata |
33195356 |
T |
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| Q |
103 |
ataactaatgttcatacacatatgtggcctcttatcaaccaacaattacaaaattatggatacaatggatttacctatgcacaagaataggactatttaa |
202 |
Q |
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| T |
33195357 |
ataactaatgttcatacacatatgtggcctcttatcaaccaacaattacaaagttatggatacaatggatttacctatgcacaagaataggactatttaa |
33195456 |
T |
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| Q |
203 |
cattttaactacactacactatagcctagttgttgttccttagttcctacctcacctgaatcatacctcttcacataattttgtagccatttagaaccaa |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33195457 |
cattttaactacactacactatagcctagttgttgttccttagttcctacctcacctgaatcatacctcttcacataattttgtagccatttagaaccaa |
33195556 |
T |
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| Q |
303 |
acacaatttcactttagatacagattccaaaccattt |
339 |
Q |
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| T |
33195557 |
atacaatttccatttagatacagattccaaaccattt |
33195593 |
T |
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