View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_high_50 (Length: 320)
Name: NF12023_high_50
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_high_50 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 45681208 - 45681502
Alignment:
| Q |
18 |
attatgagcttccggggagttaagttatgtcctaattcggacattcaattggacgttggaattatatttaaattctcattagaaagatgcttctaaaatt |
117 |
Q |
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| T |
45681208 |
attatgagcttccggggacttaagttatgtcctaattcagacatccaattggacgttggaattatatttaaattctcattagaaagatgcttctaaaatt |
45681307 |
T |
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| Q |
118 |
ctaatctccataatacatacccttatcttatcttatac--ttcccaatcccatatgagttgttcagctaagtcaaactccaaatattaaaatagaaatgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
45681308 |
ctaatctccataatacatacccttatcttatcttatacacttcccaatcccatatgagttgttcagctaagtcaaactccaaatattaaaataaaaatgt |
45681407 |
T |
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| Q |
216 |
aacttgtattttattgacagaacaaaaaatgtaatgctccattgctcttgctgtatatatatgcctataatatatgtcggcttcgttgtcctatg |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
45681408 |
aacttgtattttattgacagaacaaaaaatgtaatgctccattgctcttgctgtatatatatgcctataatatatatcggcttcgttgtcctatg |
45681502 |
T |
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