View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12023_low_1 (Length: 1341)

Name: NF12023_low_1
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12023_low_1
NF12023_low_1
[»] chr8 (22 HSPs)
chr8 (17-1332)||(22267669-22268984)
chr8 (17-105)||(40136926-40137013)
chr8 (17-95)||(34778760-34778838)
chr8 (18-102)||(6536546-6536631)
chr8 (21-102)||(11793486-11793568)
chr8 (18-102)||(968388-968473)
chr8 (17-102)||(16317636-16317721)
chr8 (20-66)||(9126585-9126631)
chr8 (18-102)||(3624606-3624690)
chr8 (17-78)||(6530832-6530893)
chr8 (17-90)||(21239371-21239444)
chr8 (18-105)||(2203518-2203606)
chr8 (23-102)||(28787461-28787541)
chr8 (17-57)||(34639345-34639385)
chr8 (21-56)||(5438450-5438485)
chr8 (18-102)||(18540324-18540409)
chr8 (20-57)||(22779683-22779720)
chr8 (21-66)||(26168978-26169023)
chr8 (17-57)||(26688890-26688931)
chr8 (18-102)||(28783086-28783171)
chr8 (27-64)||(29695331-29695368)
chr8 (17-66)||(41070783-41070832)
[»] chr2 (31 HSPs)
chr2 (17-102)||(18825366-18825451)
chr2 (18-102)||(42602580-42602665)
chr2 (17-102)||(6099484-6099569)
chr2 (27-102)||(41908603-41908679)
chr2 (17-102)||(16525203-16525288)
chr2 (18-102)||(30410514-30410599)
chr2 (17-66)||(43963990-43964039)
chr2 (18-102)||(3697365-3697449)
chr2 (17-97)||(25384561-25384641)
chr2 (23-66)||(7250260-7250303)
chr2 (18-100)||(42327362-42327445)
chr2 (17-95)||(13747606-13747684)
chr2 (17-102)||(30359679-30359764)
chr2 (17-62)||(36538873-36538919)
chr2 (17-102)||(342420-342505)
chr2 (17-66)||(8192481-8192530)
chr2 (17-66)||(26482118-26482167)
chr2 (17-102)||(28105532-28105617)
chr2 (17-90)||(29698165-29698238)
chr2 (18-90)||(28194239-28194311)
chr2 (31-102)||(37971934-37972006)
chr2 (16-67)||(40591200-40591251)
chr2 (17-66)||(12517754-12517804)
chr2 (17-67)||(36097414-36097464)
chr2 (33-102)||(45026784-45026854)
chr2 (18-102)||(12086094-12086179)
chr2 (18-102)||(19016057-19016142)
chr2 (17-66)||(19605975-19606024)
chr2 (18-102)||(21213795-21213880)
chr2 (21-101)||(26545869-26545950)
chr2 (18-102)||(37480101-37480186)
[»] chr4 (29 HSPs)
chr4 (17-102)||(25414180-25414265)
chr4 (17-103)||(21344842-21344928)
chr4 (19-69)||(38206124-38206174)
chr4 (17-102)||(46295122-46295208)
chr4 (17-102)||(29195120-29195205)
chr4 (17-102)||(32992637-32992723)
chr4 (18-102)||(7949419-7949504)
chr4 (17-66)||(37980149-37980198)
chr4 (17-90)||(41621702-41621775)
chr4 (17-66)||(56409976-56410025)
chr4 (17-65)||(42281236-42281284)
chr4 (20-102)||(4249205-4249288)
chr4 (17-103)||(8325343-8325430)
chr4 (19-66)||(25434660-25434707)
chr4 (18-99)||(37109319-37109401)
chr4 (17-66)||(4686129-4686178)
chr4 (18-102)||(30938184-30938269)
chr4 (19-102)||(2184997-2185081)
chr4 (18-105)||(13015453-13015541)
chr4 (18-61)||(27908530-27908573)
chr4 (23-57)||(5998698-5998732)
chr4 (21-102)||(19680753-19680835)
chr4 (21-55)||(31141356-31141390)
chr4 (18-102)||(15180767-15180849)
chr4 (18-102)||(23377982-23378067)
chr4 (18-102)||(37274424-37274509)
chr4 (18-102)||(38869794-38869879)
chr4 (17-90)||(40058958-40059031)
chr4 (18-102)||(51250487-51250572)
[»] chr1 (29 HSPs)
chr1 (17-105)||(34228899-34228987)
chr1 (17-95)||(39714751-39714829)
chr1 (17-102)||(6127952-6128037)
chr1 (17-100)||(31605815-31605899)
chr1 (17-95)||(39012316-39012394)
chr1 (17-66)||(37047010-37047059)
chr1 (17-90)||(39964530-39964603)
chr1 (17-102)||(44486123-44486208)
chr1 (17-105)||(15581104-15581192)
chr1 (21-102)||(19940837-19940919)
chr1 (17-102)||(36428737-36428823)
chr1 (17-102)||(43445988-43446074)
chr1 (18-102)||(27476736-27476821)
chr1 (17-66)||(38939227-38939276)
chr1 (21-102)||(17297013-17297096)
chr1 (19-66)||(44417463-44417510)
chr1 (18-89)||(48400198-48400269)
chr1 (17-102)||(952536-952622)
chr1 (17-66)||(4824996-4825046)
chr1 (17-66)||(3334794-3334843)
chr1 (18-102)||(18037578-18037663)
chr1 (17-66)||(41470612-41470661)
chr1 (17-91)||(24216996-24217070)
chr1 (34-103)||(51814536-51814606)
chr1 (18-102)||(8177147-8177232)
chr1 (17-57)||(9570668-9570709)
chr1 (18-98)||(33700742-33700823)
chr1 (18-102)||(40257425-40257510)
chr1 (17-105)||(45266859-45266948)
[»] chr7 (24 HSPs)
chr7 (17-102)||(5273555-5273641)
chr7 (17-102)||(38374564-38374650)
chr7 (17-102)||(48125140-48125225)
chr7 (17-90)||(5579211-5579285)
chr7 (18-102)||(2446334-2446419)
chr7 (23-90)||(22696348-22696415)
chr7 (17-83)||(12211648-12211714)
chr7 (17-90)||(29385720-29385794)
chr7 (19-69)||(37507024-37507073)
chr7 (17-102)||(18847388-18847473)
chr7 (18-55)||(25956305-25956342)
chr7 (18-102)||(26459375-26459460)
chr7 (18-102)||(30579361-30579446)
chr7 (20-60)||(21050148-21050188)
chr7 (46-102)||(21558183-21558239)
chr7 (17-102)||(31835217-31835303)
chr7 (33-102)||(37162315-37162385)
chr7 (21-66)||(44628184-44628230)
chr7 (16-66)||(46279038-46279088)
chr7 (18-102)||(22932677-22932761)
chr7 (17-90)||(23330845-23330918)
chr7 (18-102)||(41487388-41487470)
chr7 (18-102)||(43215210-43215295)
chr7 (18-47)||(45093631-45093660)
[»] chr3 (25 HSPs)
chr3 (17-102)||(44069783-44069869)
chr3 (17-102)||(40268514-40268599)
chr3 (17-105)||(53863830-53863918)
chr3 (24-99)||(40777045-40777120)
chr3 (17-83)||(4252509-4252575)
chr3 (17-66)||(35623268-35623317)
chr3 (17-97)||(11092140-11092220)
chr3 (17-57)||(42799758-42799798)
chr3 (18-102)||(2667888-2667973)
chr3 (17-66)||(34844396-34844445)
chr3 (18-102)||(47454582-47454667)
chr3 (17-66)||(53167793-53167842)
chr3 (19-55)||(18316511-18316547)
chr3 (16-76)||(36803083-36803143)
chr3 (19-102)||(44743820-44743904)
chr3 (23-66)||(31714348-31714391)
chr3 (17-66)||(16900682-16900732)
chr3 (17-102)||(19716222-19716308)
chr3 (17-91)||(26158836-26158910)
chr3 (17-102)||(54990727-54990813)
chr3 (18-102)||(8051240-8051325)
chr3 (22-90)||(14186678-14186746)
chr3 (18-102)||(46518654-46518739)
chr3 (17-66)||(50731363-50731412)
chr3 (17-66)||(50781442-50781491)
[»] chr6 (13 HSPs)
chr6 (27-105)||(6691513-6691591)
chr6 (34-102)||(9583408-9583476)
chr6 (18-56)||(22683-22721)
chr6 (17-57)||(6384013-6384053)
chr6 (44-102)||(24256787-24256845)
chr6 (18-102)||(12188268-12188353)
chr6 (17-96)||(24762379-24762458)
chr6 (17-102)||(24333990-24334076)
chr6 (17-98)||(24507505-24507587)
chr6 (31-76)||(10007212-10007257)
chr6 (17-66)||(17149586-17149635)
chr6 (18-102)||(31622956-31623041)
chr6 (18-102)||(33549130-33549215)
[»] chr5 (20 HSPs)
chr5 (18-102)||(8278240-8278325)
chr5 (17-66)||(15485421-15485470)
chr5 (18-99)||(16457836-16457918)
chr5 (17-66)||(16172985-16173034)
chr5 (17-90)||(23270628-23270701)
chr5 (17-78)||(31669014-31669075)
chr5 (17-66)||(33025498-33025547)
chr5 (23-83)||(11064540-11064600)
chr5 (18-105)||(18595963-18596051)
chr5 (17-56)||(5943893-5943932)
chr5 (20-55)||(32340349-32340384)
chr5 (21-105)||(3315244-3315329)
chr5 (22-102)||(14495770-14495851)
chr5 (17-66)||(14656645-14656694)
chr5 (22-102)||(16773837-16773918)
chr5 (21-58)||(17648977-17649014)
chr5 (18-102)||(21549103-21549187)
chr5 (18-102)||(21589314-21589399)
chr5 (53-102)||(21701097-21701146)
chr5 (30-67)||(25343270-25343307)
[»] scaffold0065 (1 HSPs)
scaffold0065 (17-102)||(12214-12300)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-102)||(15288-15373)
[»] scaffold0172 (1 HSPs)
scaffold0172 (18-102)||(15742-15827)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-70)||(240883-240936)
[»] scaffold0337 (1 HSPs)
scaffold0337 (17-98)||(1778-1860)
[»] scaffold0068 (1 HSPs)
scaffold0068 (53-102)||(12764-12813)


Alignment Details
Target: chr8 (Bit Score: 1186; Significance: 0; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 1186; E-Value: 0
Query Start/End: Original strand, 17 - 1332
Target Start/End: Complemental strand, 22268984 - 22267669
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttattnnnnnnnnn-g 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |    
T  22268984 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttattaaaaaaaaaag 22268885  T
Q  116 atgatacatactattgttttacagggttcaataatggttttagtgatgagttagtaatgtgatacatgtaggaatttactgatcggtgggaagtggatcg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268884 atgatacatactattgttttacagggttcaataatggttttagtgatgagttagtaatgtgatacatgtaggaatttactgatcggtgggaagtggatcg 22268785  T
Q  216 ctatttgagtgcaagtggttaccttggagacaacactcggccnnnnnnngtggcacttcctaaggatagaggcaacatttcaaatgaagagttccgcagg 315  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22268784 ctatttgagtgcaagtggttaccttggagacaacactcggcctttttttgtggcccttcctaaggatagaggcaacatttcaaatgaagagttccgcagg 22268685  T
Q  316 cagatctctcatgtggactcggaggttatgcatcatctccgcgacggtgtcaagggaggttttgatgaagaaaagttcaagtcctatattggttttggcc 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268684 cagatctctcatgtggactcggaggttatgcatcatctccgcgacggtgtcaagggaggttttgatgaagaaaagttcaagtcctatattggttttggcc 22268585  T
Q  416 gtctgagggattatttggagtctgagcttcagaagaaatacaaagaagctgctccatcaactcttgccttgcttgagcaaaggtgtagtgaggtcacttg 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22268584 gtctgagggattatttggagtctgagcttcagaagaaatacaaagaagctgctccatcaactcttgccttgcttgagcaaaggtgtagtgaggtcacctg 22268485  T
Q  516 tgaactttctggattggattcaaaaattgaggccacttcagatatttctcatctgaggaaatttgcaatgctgtgtgcagcttctatcagcaaccatgtg 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268484 tgaactttctggattggattcaaaaattgaggccacttcagatatttctcatctgaggaaatttgcaatgctgtgtgcagcttctatcagcaaccatgtg 22268385  T
Q  616 gtgggtaatcatagttattattgtgacaaagcaatatttattttgaacttggtcatgaactgaagattattatgtatatgcaagctaataactaactatt 715  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22268384 gtgggtaatcatagttattattgtgacaaagcaatatttattttgaacttggttatgaactgaagattattatgtatatgcaagctaataactaactatt 22268285  T
Q  716 ttactctgcaaatgggtgttccatcagggtgccttgattgatggtgcagcagatccttcccctgagcagtggggaaaaacaacagtagaagagcggtctc 815  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268284 ttactctgcaaatggatgttccatcagggtgccttgattgatggtgcagcagatccttcccctgagcagtggggaaaaacaacagtagaagagcggtctc 22268185  T
Q  816 aaagtggcattgggatttggcctggtgtcatcaccgatgtgaannnnnnnaatgccactcttcgtctttatggaggggctgcatttgagagggtgatgca 915  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22268184 aaagtggcattgggatttggcctggtgtcatcaccgatgtgaacccccccaatgccactcttcgtctttatggaggggctgcatttgagagggtgatgca 22268085  T
Q  916 tgaatttcgctgtgctgcatattccattgaatgccccccagtctcaagggaaaaggtgatattatttatgtacnnnnnnncataaactcatgatctgagt 1015  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||     
T  22268084 tgaatttcgctgtgctgcatattccattgaatgccccccagtctcaagggaaaaggtgatattatttatgtac-ttttttcataaactcatgatctgagg 22267986  T
Q  1016 aatcttttatcttctttattccttttatttcaaattgaaattcattggtatctatcattactttaataggttgcaaatatattgctggcccatgctggcc 1115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22267985 aatcttttatcttctttattcctttcatttcaaattgaaattcattggtatctatcattactttaataggttgcaaatatattgctggcccatgctggcc 22267886  T
Q  1116 gaggtgggggaagaggactaacagaggctgctgcagagattgcacgtgctgctgctagatcatggcttgctcctcttcttgatactgcatgtgaccgcct 1215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22267885 gaggtgggggaagaggactaacagaggctgctgcagagattgcacgtgctgctgctagatcatggcttgctcctcttcttgatactgcatgtgaccgcct 22267786  T
Q  1216 tgcttttgttttaggaagcttatttgatttggctctagaaagaaaccgtaggcatgattcagcatgtatgtgaagcttcttccttgctggcatacccttt 1315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22267785 tgcttttgttttaggaagcttatttgatttggctctagaaagaaaccgtaggcatgattcagcatgtatgtgaagcttcttccttgctggcttacccttt 22267686  T
Q  1316 tgtctaatttatgatgt 1332  Q
    |||||||||||||||||    
T  22267685 tgtctaatttatgatgt 22267669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 40137013 - 40136926
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||| |||| |||||| |||| | |||||||    
T  40137013 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattctc-ccggtgccaatttcggtgggctagtctggcttatt 40136926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 34778760 - 34778838
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagt 95  Q
    ||||||||| ||||||| ||||||||| | |||||||||||||||||||||||  ||||||| |||| |||||| ||||    
T  34778760 gttggcttgagaccttgcagtgtgctcctttcaaggtctcaagtttgattttccacggtgccaatttcggtgggctagt 34778838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 6536546 - 6536631
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || ||||||||||| |||  ||| |||| |||||| |||||||||||||| ||||||||    
T  6536546 ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagctt 6536631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 11793568 - 11793486
Alignment:
Q  21 gcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||||||| || ||||||||| | |||||||| |  |||||||| |||| |||||| |||||||||||    
T  11793568 gcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggtgggctagtttagctt 11793486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 968388 - 968473
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| |||| ||||||||||| || ||||||||    
T  968388 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagctt 968473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 16317636 - 16317721
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||| |||||||||| |||||  |||||| ||| |||| |||| |||||| ||||  ||||| |||||||||||    
T  16317636 gttggcttgggaccttagagtgtgctcctctcagcgtctcatgttcgattctctctggtgccaatttcagtgggctagtttagctt 16317721  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 9126631 - 9126585
Alignment:
Q  20 ggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  9126631 ggcttgggaccttggagtgtgctcctctcaaggactcaagttcgatt 9126585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 3624606 - 3624690
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||| |||| ||||||| | | ||||||||||| || ||||||||    
T  3624606 ttggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccgg-gtcaatttaggtgggctaatttagctt 3624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 6530832 - 6530893
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcc 78  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||| |||| || ||||||||    
T  6530832 gttggcttgggacctaggagtgtgctcctctcaatgtctcaggttcgattctccccggtgcc 6530893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 21239371 - 21239444
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||| || ||||||||||| || | ||||||| ||||||||||||||| | |||||| |||| ||||||    
T  21239371 gttggcttgcgatcttggagtgtgttcctttcaaggtttcaagtttgattttccctggtgccaatttcggtggg 21239444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 2203518 - 2203606
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    |||||||||||||| |||||||||| || |||||||||||| | |  ||| || |||||||| |||| |||||| || |||||||||||    
T  2203518 ttggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaatttagcttatt 2203606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 28787541 - 28787461
Alignment:
Q  23 ttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||  ||||||||| || ||||||||||| |||||||| || || ||||| |||||||||||  ||||||||||    
T  28787541 ttgggaccttcaagtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaatttaggtgggaaagtttagctt 28787461  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 34639385 - 34639345
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctca 57  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  34639385 gttggcttgggatcttggagtgtgctcctctcaaggtctca 34639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 5438485 - 5438450
Alignment:
Q  21 gcttgggaccttggagtgtgctcttctcaaggtctc 56  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5438485 gcttgggaccttggagtgtgctcctctcaaggtctc 5438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 18540324 - 18540409
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||| || || |||||||||||| ||| |||| |||| |||||| ||||  | |||||| ||||||||    
T  18540324 ttggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagctt 18540409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 22779683 - 22779720
Alignment:
Q  20 ggcttgggaccttggagtgtgctcttctcaaggtctca 57  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  22779683 ggcttgggaccttggaatgtgctcctctcaaggtctca 22779720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 26169023 - 26168978
Alignment:
Q  21 gcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||||||| |||||||| ||||| ||||||||||||| ||||||||    
T  26169023 gcttgggatcttggagtttgctcctctcaaggtctcaggtttgatt 26168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 26688890 - 26688931
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctca 57  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  26688890 gttggcttgggaccttggagtgtgctcctcctcaaggtctca 26688931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 28783086 - 28783171
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| ||||| ||||||||||| || ||||||||||| ||| |||| ||  ||||||| |||| |||||| || ||||||||    
T  28783086 ttggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagctt 28783171  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 29695368 - 29695331
Alignment:
Q  27 gaccttggagtgtgctcttctcaaggtctcaagtttga 64  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  29695368 gaccttggagtatgctcctctcaaggtctcaagtttga 29695331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 41070783 - 41070832
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||| ||||    
T  41070783 gttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgatt 41070832  T

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Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 18825366 - 18825451
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||| || ||||| |||||    
T  18825366 gttggcttgggacctaggagtgtgctcctctcaaggtctcaagtttgattttccccggtgccaatttcggtaggctagttgagctt 18825451  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 42602580 - 42602665
Alignment:
Q  18 ttggcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| |||||||||||| | |||||||| ||||||||||| |||| |||||| || ||||||||    
T  42602580 ttggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagctt 42602665  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6099569 - 6099484
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| |||| || ||| |||| || | |||||| |||||| ||||    
T  6099569 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccccgctgccaatatcggtgggctagtttggctt 6099484  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 41908679 - 41908603
Alignment:
Q  27 gaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||| || ||||||||||||||| |||| || |||||||| |||| |||||| |||||||||||    
T  41908679 gaccttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagctt 41908603  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 16525203 - 16525288
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||| |||||||||||   ||||||||||||| ||| |||| || |||||||| |||| ||||| ||||||| ||||    
T  16525203 gttggcttgggacgttggagtgtgcgactctcaaggtctcaggttcgattctccccggtgccaatttcggtggattagtttggctt 16525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 30410599 - 30410514
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || |||||| |||| ||| ||||||||| |||||| ||||  | |||||||||||||||    
T  30410599 ttggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagctt 30410514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 43964039 - 43963990
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  43964039 gttggtttgggaccttggagtgtgctcctctcaaggtctcatgtttgatt 43963990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 3697449 - 3697365
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||| |||| ||  ||||||| |||| || |||||||||| ||||    
T  3697449 ttggcttgggaccttggagagtgctcctctcaaggtctctggttcgattctcctcggtgccaatttcggcgggttagtttggctt 3697365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 25384561 - 25384641
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagttt 97  Q
    ||||||||||||||||||||||||||| ||||| ||||||  ||| |||| |   ||||||| |||| |||||||||||||    
T  25384561 gttggcttgggaccttggagtgtgctcctctcagggtctcgggttcgattatgctcggtgccaattttggtgggttagttt 25384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 7250260 - 7250303
Alignment:
Q  23 ttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  7250260 ttgggaccttggagtgtgctcctctcaagatctcaagtttgatt 7250303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 42327445 - 42327362
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagc 100  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||| |||| ||| ||||||| |||| |||||| || ||||||    
T  42327445 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagc 42327362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13747684 - 13747606
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagt 95  Q
    ||||||||||||||||||||| ||||| || |||||||||| |||||| |  | |||||||| |||| |||||| ||||    
T  13747684 gttggcttgggaccttggagtatgctcctcccaaggtctcaggtttgaatccccccggtgccgatttcggtgggctagt 13747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 30359679 - 30359764
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||||||||||| || ||||||||||| | || |||| || || ||||| |||| |||||| |||||||||||    
T  30359679 gttggcttgggaccttggagtgtgctcctcctcaaggtctc-atttcgattctccccagtgccaatttgggtgggctagtttagctt 30359764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 36538873 - 36538919
Alignment:
Q  17 gttggcttgggaccttggagtgtgctctt-ctcaaggtctcaagttt 62  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  36538873 gttggcttgggaccttggaatgtgctcttcctcaaggtctcaagttt 36538919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 342420 - 342505
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| ||||||||||||| ||| || ||||||||||||||  ||| ||  ||||||| |||| |||||||| |||| ||||    
T  342420 gttggcttgtgaccttggagtgtactcatcgcaaggtctcaagttcaattctcctcggtgccaatttcggtgggttggtttggctt 342505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 8192530 - 8192481
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||| ||||    
T  8192530 gttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 8192481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 26482118 - 26482167
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||| ||||    
T  26482118 gttggcttgggacctaggagtgtgctcctctcaaggtctcaggttcgatt 26482167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 28105532 - 28105617
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||| ||| |||||||||||||||||  || |||| |||| | || | |||| |||||||| |||| ||||    
T  28105532 gttggcttgggaccttggattgtactcttctcaaggtctcagattagattctctctgatggcaattttggtgggttcgtttggctt 28105617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 29698165 - 29698238
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||||||||| |||||| | ||||| |||||||||||||||||| |||| ||| |||| | |||| ||||||    
T  29698165 gttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtggg 29698238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28194311 - 28194239
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||||| |||||||||||||| ||| ||||||| | ||| |||| |||| |||||| |||| ||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtggg 28194239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 37971934 - 37972006
Alignment:
Q  31 ttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||| || |||| |||||| ||| |||| ||||||||||| ||||||||||| || ||||||||    
T  37971934 ttggagtgtgctccttgtcaaagtctcaggttcgattctctccggtgccaatttaggtgggctaatttagctt 37972006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 40591200 - 40591251
Alignment:
Q  16 agttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattt 67  Q
    |||||||||| || |||||||||||||| |||||| |||||| |||||||||    
T  40591200 agttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgattt 40591251  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 12517804 - 12517754
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||| |||| || |||||||||||| ||||||||    
T  12517804 gttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgatt 12517754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 36097464 - 36097414
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattt 67  Q
    ||||| |||| || ||||||||||||| ||||||||||||| |||||||||    
T  36097464 gttggattggaactttggagtgtgctcatctcaaggtctcatgtttgattt 36097414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 45026784 - 45026854
Alignment:
Q  33 ggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || ||||||||||| |||||||| |||| |||||| ||||  | |||||||||||||||    
T  45026784 ggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaatttgagggggttagtttagctt 45026854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 12086179 - 12086094
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| | ||||||||| || ||||||||||  ||| ||||  |||||||||  ||||||||||| || ||||||||    
T  12086179 ttggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagctt 12086094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 19016057 - 19016142
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| ||| | ||||||||||| || || ||||||||||||||||| || |||||||| ||||| || || || ||||||||    
T  19016057 ttggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagctt 19016142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 19606024 - 19605975
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||||||||||| ||||||||| |||| ||||||||||||| ||| ||||    
T  19606024 gttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgatt 19605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 21213795 - 21213880
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||| || || |  |||||||| ||| |||| || |||||||| ||||||||||| |||||| ||||    
T  21213795 ttggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgctt 21213880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 26545869 - 26545950
Alignment:
Q  21 gcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagct 101  Q
    |||||||| || | ||||||||| ||||| ||||||||||||||||| ||| || |  | |||||||||||||| |||||||    
T  26545869 gcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctcttcgatatcaatttaggtgggttaatttagct 26545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37480101 - 37480186
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||  |||||||||| || ||||||||||| ||| |||| || ||||| || |||| |||||| || ||||||||    
T  37480101 ttggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagctt 37480186  T

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Target: chr4 (Bit Score: 50; Significance: 6e-19; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 25414265 - 25414180
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| ||||||||||||||||| |||||| |||||| |||||||| || |||||||| |||| ||||||||||||| ||||    
T  25414265 gttggcttgagaccttggagtgtgctcctctcaaagtctcaggtttgattctccccggtgccaattttggtgggttagtttggctt 25414180  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 21344842 - 21344928
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctta 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||  ||| || || ||| | ||||||||||| |||||| |||||    
T  21344842 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcaattctccccagtgtcaatttaggtgggctagtttggctta 21344928  T

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Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 38206174 - 38206124
Alignment:
Q  19 tggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttc 69  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  38206174 tggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattttc 38206124  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 46295122 - 46295208
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||| ||||||||||||| || ||||||||||| ||| |||| || |||||||| |||| |||||| |||||||||||    
T  46295122 gttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagctt 46295208  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 29195120 - 29195205
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||   |||| |||| ||| || |||||||||||    
T  29195120 gttggcttgggaccttggagtgtgctcctctcaaggtcgcaagttcgattctctctaatgccaattttggttggctagtttagctt 29195205  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 32992637 - 32992723
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||||||||||| || |||||||||||||||| |||| || |||||| | ||||  ||||  |||||||||||    
T  32992637 gttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagctt 32992723  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 7949504 - 7949419
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||| |||| |||| |||| | ||||||||||| || ||||||||    
T  7949504 ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagctt 7949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 37980198 - 37980149
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  37980198 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgatt 37980149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 41621775 - 41621702
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||| || |||||||| ||||| ||||||||||||| ||||||||| ||| |||||| |||| ||||||    
T  41621775 gttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtggg 41621702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 56409976 - 56410025
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgatt 56410025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 42281284 - 42281236
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgat 65  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  42281284 gttggcttgggaccttgtagtgtgctcctctcaaggtctcaggtttgat 42281236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 4249205 - 4249288
Alignment:
Q  20 ggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||  ||||||||||||| || ||||||||||| |||||||| |||| |||||| ||||  | |||||||||||||||    
T  4249205 ggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagctt 4249288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 8325430 - 8325343
Alignment:
Q  17 gttggcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctta 103  Q
    ||||||||| ||||||||||||||||| | |||||||||| | ||| |||| || |||||| | |||| |||||| ||||||||||||    
T  8325430 gttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgggctagtttagctta 8325343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25434707 - 25434660
Alignment:
Q  19 tggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  25434707 tggcttgggaccttggagtgtgcttctctcaaggtctcaggtttgatt 25434660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 37109401 - 37109319
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttag 99  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||| |||| |||| |||||| ||||  | ||||||||||||    
T  37109401 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttag 37109319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 4686178 - 4686129
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| ||||||||||||||||| |||||| |||||| ||||||||    
T  4686178 gttggcttgagaccttggagtgtgctcctctcaatgtctcaggtttgatt 4686129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 30938269 - 30938184
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||| |||||| |||||||||||||| || || |||||||| ||| |||| || ||  |||| |||||||||||||||||||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagctt 30938184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 2185081 - 2184997
Alignment:
Q  19 tggcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| |||| ||||||||||| ||||||| |||||| ||| |||| |||||| |||| ||||  | |||||||||||||||    
T  2185081 tggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagctt 2184997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 13015453 - 13015541
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    |||||||||||| | ||||||||||| || || | |||||| ||| |||| |||| |||| | |||||||||||||| |||||||||||    
T  13015453 ttggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagcttatt 13015541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 27908530 - 27908573
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtt 61  Q
    ||||||| ||||||||||||||| || |||||||||||||||||    
T  27908530 ttggctttggaccttggagtgtgttcctctcaaggtctcaagtt 27908573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 5998732 - 5998698
Alignment:
Q  23 ttgggaccttggagtgtgctcttctcaaggtctca 57  Q
    ||||||||||||||||||||| |||||||||||||    
T  5998732 ttgggaccttggagtgtgctcctctcaaggtctca 5998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 19680835 - 19680753
Alignment:
Q  21 gcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| | |||||||||||||| ||||||||| | ||| |||| |||| |||||| ||||| |  ||||||||||||||    
T  19680835 gcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaaggaggttagtttagctt 19680753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 31141390 - 31141356
Alignment:
Q  21 gcttgggaccttggagtgtgctcttctcaaggtct 55  Q
    ||||||||||||||||||||||| |||||||||||    
T  31141390 gcttgggaccttggagtgtgctcctctcaaggtct 31141356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 15180767 - 15180849
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||| |||  |||||||||| | ||| |||| |||| |||||| ||||  | |||||||||||||||    
T  15180767 ttggcttgggacctgggagtgtactc--ctcaaggtcttaggttcgattctctctggtgccaatttgagggggttagtttagctt 15180849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 23377982 - 23378067
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || |||||||||||| ||| |||| ||||  ||||| ||||  | ||| |||||||||||    
T  23377982 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagctt 23378067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 37274509 - 37274424
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || |||||||||| | ||| |||| |||| |||||  ||||| ||||| || ||||||||    
T  37274509 ttggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagctt 37274424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 38869794 - 38869879
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || ||||||||||| || ||||||||||| ||| ||||  ||| |||||| ||||  | |||||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagctt 38869879  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 40059031 - 40058958
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||||||||| |||||||| ||||| |||  |||||||| ||| |||| |||| |||||| |||| ||||||    
T  40059031 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtggg 40058958  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 51250572 - 51250487
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || |||||||||| |  |||||| ||||||||| ||||  |||||||||| |||| |||||| || ||||||||    
T  51250572 ttggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatttagctt 51250487  T

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Target: chr1 (Bit Score: 49; Significance: 2e-18; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 34228899 - 34228987
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||||||||||||| |||||||| || ||||||||||||| ||| |||| ||||||||||| |||| |||||| |||||| |||||||    
T  34228899 gttggcttgggacctcggagtgtgttcctctcaaggtctcaggttggattctctccggtgccaattttggtgggctagtttggcttatt 34228987  T

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Target: chr1; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 39714829 - 39714751
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagt 95  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||| ||  ||||||| |||| |||||| ||||    
T  39714829 gttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattctcctcggtgccgatttcggtgggctagt 39714751  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6128037 - 6127952
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| |||| || |||||||| |||| |||||| |||||| ||||    
T  6128037 gttggtttgggaccttggagcgtgctcctctcaaggtctcaagttcgattctccccggtgccaattttggtgggctagtttggctt 6127952  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 31605899 - 31605815
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagc 100  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||| |||| || |||||||| |||| |||||| |||||||||    
T  31605899 gttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagtttagc 31605815  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 39012316 - 39012394
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagt 95  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||  |  ||||||| |||| |||||| ||||    
T  39012316 gttggcttgggaccttggagtgtgctcttctcaaggtcttaggtttgattcccctcggtgccaatttcggtgggctagt 39012394  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 37047010 - 37047059
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgatt 37047059  T

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Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 39964530 - 39964603
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||||  ||| |||||| |||| ||||||    
T  39964530 gttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 39964603  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 44486208 - 44486123
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||| |||| |||||||||||||||| |||||||||||||| ||  ||| || |||||||| |||| ||||||||||||| ||||    
T  44486208 gttggtttggaaccttggagtgtgctcctctcaaggtctcaaattcaattctccccggtgccaatttcggtgggttagtttggctt 44486123  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 15581192 - 15581104
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||  ||| || |||||||  |||| |||||| |||||| |||||||    
T  15581192 gttggcttgggaccttggagtgtgctcctctaaaggtctcaggttcaattctccccggtgctgatttcggtgggctagtttggcttatt 15581104  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 19940919 - 19940837
Alignment:
Q  21 gcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||| ||||||||||||||| || | ||||||||| |||||||| ||||||||||| ||||| ||||| | |||||||||    
T  19940919 gcttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtgggctggtttagctt 19940837  T

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Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36428737 - 36428823
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||| |||||||||| ||||| || ||||||||||| |||||||| || |||||||| |||| |||||| |||||| ||||    
T  36428737 gttggcttggtaccttggagtatgctcctcctcaaggtctcatgtttgattctccccggtgccaatttgggtgggctagttttgctt 36428823  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 43445988 - 43446074
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| ||||||||||||||| || ||||||||||| ||| |||| || |||||||| ||||  ||||| |||||||||||    
T  43445988 gttggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagtttagctt 43446074  T

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Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 27476821 - 27476736
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||| | ||||||||||| || || || |||||||||||||| |||| |||||| ||||||||||| || ||||||||    
T  27476821 ttggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagctt 27476736  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 38939227 - 38939276
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  38939227 gttggcttgggaccttggagtgtgctcctctcaaggtctctggtttgatt 38939276  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 17297013 - 17297096
Alignment:
Q  21 gcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgatt-ttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| | | |||||||| |||| |||||| || ||||||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaatttagctt 17297096  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 44417510 - 44417463
Alignment:
Q  19 tggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  44417510 tggcttgggaccttggagtgtgctgctctcaaggtctcaggtttgatt 44417463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 48400198 - 48400269
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgg 89  Q
    ||||||||||||||||||| |  ||| ||||||||||||| ||  |||| ||||||||||| ||||||||||    
T  48400198 ttggcttgggaccttggagcgcactcctctcaaggtctcaggtgcgattctctccggtgccaatttaggtgg 48400269  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 952536 - 952622
Alignment:
Q  17 gttggcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||| ||||||||||| | ||||| |||||| ||| |||| || ||| || | |||||||||||||| ||||||||    
T  952536 gttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtgggttaatttagctt 952622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 4824996 - 4825046
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  4824996 gttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgatt 4825046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 3334794 - 3334843
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| || ||| |||||||||||||||||||||||||||| ||||    
T  3334794 gttggcttgagatcttagagtgtgctcttctcaaggtctcaagttcgatt 3334843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 18037663 - 18037578
Alignment:
Q  18 ttggcttgggaccttggagtgtgctc-ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||| ||||||| | ||||||||||| || || || ||||||||| |||| ||||||||||| ||||||||||| || ||||||||    
T  18037663 ttggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagctt 18037578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 41470661 - 41470612
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||| ||||    
T  41470661 gttggcttgagaccttggagtatgctcctctcaaggtctcaagttcgatt 41470612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 24216996 - 24217070
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggt 91  Q
    |||| ||||||| |||||||||||||| ||||||||||||| ||| ||||  ||  |||||| |||| |||||||    
T  24216996 gttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggt 24217070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 51814536 - 51814606
Alignment:
Q  34 gagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctta 103  Q
    |||||||||| || ||||||||||| ||| |||| ||||||||||| |||| |||||| || |||||||||    
T  51814536 gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctta 51814606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 8177232 - 8177147
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || ||||||||||| || ||||||| ||| ||| |||| |||| |||||| ||||  | |||||||||||||||    
T  8177232 ttggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagctt 8177147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 9570668 - 9570709
Alignment:
Q  17 gttggcttgggaccttggagtgtgctctt-ctcaaggtctca 57  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  9570668 gttggcttgagaccttggagtgtgctcttcctcaaggtctca 9570709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 33700823 - 33700742
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagttta 98  Q
    ||||||||| | || ||||||||||| || ||||||||||| ||| |||| |||| |||||| ||||| | |||||||||||    
T  33700823 ttggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggttagttta 33700742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 40257425 - 40257510
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| ||||| ||||||||||| || || ||||||||||||  ||| | ||||||| | |||| |||||| |||||||||||    
T  40257425 ttggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagctt 40257510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 45266859 - 45266948
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    |||| |||||| | ||||||| ||||| || ||||||||||| ||| |||| || |||||||| |||| | |||| ||||||||||||||    
T  45266859 gttgacttggggctttggagtttgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggctagtttagcttatt 45266948  T

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Target: chr7 (Bit Score: 47; Significance: 3e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5273641 - 5273555
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||| |||||||||| || ||||||||| | |||||||| ||||||||||| |||| |||||| |||||||||||    
T  5273641 gttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgggctagtttagctt 5273555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 38374650 - 38374564
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||| |||||||||| || ||||||||| | ||| |||| || |||||||| ||||||||||| |||||||||||    
T  38374650 gttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagctt 38374564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 48125225 - 48125140
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||  |||||| |||||||| |||| |||||| |||||| ||||    
T  48125225 gttggcttgggaccttggagtgtgctcctccgaaggtctcaggttcaattttccccggtgccaatttcggtgggctagtttggctt 48125140  T

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Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 5579285 - 5579211
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||| | || |||||||| |||| ||||||    
T  5579285 gttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtggg 5579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2446334 - 2446419
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||| | ||||||||||| || || || ||||||||| |||| ||||||||||| ||||||||||| || ||||||||    
T  2446334 ttggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagctt 2446419  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 22696348 - 22696415
Alignment:
Q  23 ttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||| |||| ||||||    
T  22696348 ttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 12211714 - 12211648
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccattt 83  Q
    |||||||| ||| |||||||||||||| ||||||| ||||| ||||||||| ||| |||||| ||||    
T  12211714 gttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaattt 12211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 29385794 - 29385720
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||||||| |||||||||||| || |||||||||||| |||||||| |||  |||||| |||| ||||||    
T  29385794 gttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtggg 29385720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 37507024 - 37507073
Alignment:
Q  19 tggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttc 69  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  37507024 tggcttgtgaccttggagtgtactct-ctcaaggtctcaagtttgattttc 37507073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 18847473 - 18847388
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| || ||| |||||||||| ||||||| ||||||||| | || ||||||||||| |||| || |||||| ||| ||||    
T  18847473 gttggcttgagatcttcgagtgtgctcctctcaagatctcaagttcgtttctctccggtgccaattttggcgggttaatttggctt 18847388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25956342 - 25956305
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtct 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25956342 ttggcttgggaccttggagtgtgctcctctcaaggtct 25956305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 26459460 - 26459375
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || |||||||||||| ||| |||| |||| |||||| ||||    |||||||||||||||    
T  26459460 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagctt 26459375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 30579361 - 30579446
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| ||||| ||||||| | | || ||||||||||| ||| ||||||||| |||||| ||||||||||| || ||||||||    
T  30579361 ttggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagctt 30579446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 21050188 - 21050148
Alignment:
Q  20 ggcttgggaccttggagtgtgctcttctcaaggtctcaagt 60  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  21050188 ggcttgagaccttggagtgtgctcctctcaaggtctcaagt 21050148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 21558183 - 21558239
Alignment:
Q  46 ctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||| ||| |||| |||| |||||| |||||||||||||| ||||||||    
T  21558183 ctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagctt 21558239  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 31835217 - 31835303
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||  |||||||||||||| || ||||||||||| ||| |||| || | |||||| |||| || ||| |||||||||||    
T  31835217 gttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttggcgggctagtttagctt 31835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 37162385 - 37162315
Alignment:
Q  33 ggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||| ||||||||||||||||||| |||| |||| |||||| ||||  | || ||||||||||||    
T  37162385 ggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggattagtttagctt 37162315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 44628230 - 44628184
Alignment:
Q  21 gcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgatt 66  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||    
T  44628230 gcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgatt 44628184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 46279038 - 46279088
Alignment:
Q  16 agttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||| ||| |||||||||||||||||| ||||||||||||  ||||||||    
T  46279038 agttgactttggaccttggagtgtgctcctctcaaggtctccggtttgatt 46279088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 22932761 - 22932677
Alignment:
Q  18 ttggcttgggaccttggagtgtgctctt-ctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||| ||||||  ||||| ||||| |||||| | ||| ||||||| ||||||||||| || ||||||||    
T  22932761 ttggcttgggacctgggagtgcgctcttattcaagatctcaggtttgaatctct-cggtgccaatttaggtgggctaatttagctt 22932677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 23330918 - 23330845
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    ||||||||||||  || |||||||||| ||||||||||||| ||| || |  |||||||||| |||| ||||||    
T  23330918 gttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtggg 23330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 41487388 - 41487470
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||| | ||||||| |||  |||||||||||| ||| |||| |  |||||||| ||||||||||| || ||||||||    
T  41487388 ttggcttgggacttgggagtgttctc--ctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagctt 41487470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 43215210 - 43215295
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || |||||||||||| ||| |||| ||||   |||| ||||  | |||||||||||||||    
T  43215210 ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggttagtttagctt 43215295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 45093660 - 45093631
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttct 47  Q
    ||||||||||||||||||||||||||||||    
T  45093660 ttggcttgggaccttggagtgtgctcttct 45093631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 3e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 44069783 - 44069869
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| || |||||||||||||| || ||||||||||| |||||||| | ||||||||| ||||||||||| |||||||||||    
T  44069783 gttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagctt 44069869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 40268514 - 40268599
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||||||| |||| ||| ||||||||| ||| |||| || ||| |||| |||| ||||||||||||||||||    
T  40268514 gttggcttgggaccttggagtgggctcctcttaaggtctcaggttcgattctccccgatgccaatttcggtgggttagtttagctt 40268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 53863918 - 53863830
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||  ||| |||| |||||| |||| | ||||||||||| |||||||    
T  53863918 gttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctctctggtgccaatttcgttgggttagtttggcttatt 53863830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 40777045 - 40777120
Alignment:
Q  24 tgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttag 99  Q
    |||||| ||||||||||||| ||||||||||||| |||||||| ||||  ||||| |||| |||||| ||||||||    
T  40777045 tgggacattggagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcggtgggctagtttag 40777120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4252575 - 4252509
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccattt 83  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||||  ||| |||||| ||||    
T  4252575 gttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaattt 4252509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 35623317 - 35623268
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  35623317 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcgatt 35623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 11092220 - 11092140
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagttt 97  Q
    ||||||||||||||||| ||||||||  |||||||||||||| || |||| || | |||||  |||| |||||||||||||    
T  11092220 gttggcttgggaccttgtagtgtgctactctcaaggtctcaacttcgattctccctggtgctaatttcggtgggttagttt 11092140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 42799798 - 42799758
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctca 57  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  42799798 gttggcttgggaccttggagtgtgctcctctcaaggtctca 42799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2667888 - 2667973
Alignment:
Q  18 ttggcttgggaccttggagtgtgctctt-ctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || ||||||||||||| ||| |||||||| ||| |||| ||||  ||| | ||||||||||| |||||||||||    
T  2667888 ttggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagctt 2667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 34844396 - 34844445
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||| ||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgatt 34844445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 47454667 - 47454582
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||| || |||||||||||||| || || |||||||| ||| |||| || ||  |||| |||||||||||||||||||||||    
T  47454667 ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagctt 47454582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 53167842 - 53167793
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| |||| |||||||||||  ||||||||||||||||||||||    
T  53167842 gttggcttgagaccatggagtgtgcttctctcaaggtctcaagtttgatt 53167793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 18316547 - 18316511
Alignment:
Q  19 tggcttgggaccttggagtgtgctcttctcaaggtct 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18316547 tggcttgggaccttggagtgtgctcctctcaaggtct 18316511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 36803143 - 36803083
Alignment:
Q  16 agttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtg 76  Q
    ||||||||| | | |||||||||||||| |||||| |||||||||| ||||| ||||||||    
T  36803143 agttggcttagaatcttggagtgtgctcctctcaaagtctcaagttcgatttcctccggtg 36803083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 44743904 - 44743820
Alignment:
Q  19 tggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||| || |||||||||| || ||| |||||||| ||| |||| ||||| ||||| |||| ||||||||| ||||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagctt 44743820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 31714348 - 31714391
Alignment:
Q  23 ttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  31714348 ttgggaccttgaagtgtgctcctctcaaggtctcaagttcgatt 31714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 16900732 - 16900682
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| ||||    
T  16900732 gttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgatt 16900682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 19716222 - 19716308
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||||||||| || |||||||||||  ||| |||| || |||||| | |||| |||||| || ||||||||    
T  19716222 gttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagctt 19716308  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 26158836 - 26158910
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggt 91  Q
    ||||||||| || |||||||||||||| ||||||||||||| |||| |||  ||  |||||| |||| |||||||    
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggt 26158910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 54990727 - 54990813
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||||| ||||| || |||||||||||| ||| |||| ||  || || | ||||||||||| || ||||||||    
T  54990727 gttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaatttagctt 54990813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 8051240 - 8051325
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| | ||| |||| || ||| |||||||||||| ||||  |||||||||| |||||| |||| | |||||||||    
T  8051240 ttggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttgggctcgtttagctt 8051325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 14186678 - 14186746
Alignment:
Q  22 cttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||||||| ||||||||||| || ||||||||||| ||| |||| ||||||||| | |||||||||||    
T  14186678 cttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtggg 14186746  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 46518654 - 46518739
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||| || ||||||||||| || ||||||| ||| |||||||| |||| | |||| ||||  | |||||||||||||||    
T  46518654 ttggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggttagtttagctt 46518739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 50731412 - 50731363
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||| |||| || |||| ||||||||| ||||||||||||||||||||||    
T  50731412 gttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgatt 50731363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 50781442 - 50781491
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||| |||| || |||| ||||||||| ||||||||||||||||||||||    
T  50781442 gttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgatt 50781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000008; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 6691591 - 6691513
Alignment:
Q  27 gaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||||||||||||||| ||||||||||||| ||| |||| ||||||||||| |||| ||| || |||||| |||||||    
T  6691591 gaccttggagtgtgctcctctcaaggtctcaggttcgattctctccggtgccaatttcggtagggtagtttggcttatt 6691513  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 9583408 - 9583476
Alignment:
Q  34 gagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||| |||||||||||| |||| |||| |||| |||||| |||| ||||||||||||||||||    
T  9583408 gagtgtgctcctctcaaggtctccagttcgattctctctggtgccaatttcggtgggttagtttagctt 9583476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22721 - 22683
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttctcaaggtctc 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22721 ttggcttgggaccttggagtgtgctcttctcaaggtctc 22683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 6384053 - 6384013
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctca 57  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  6384053 gttggcttgggaccttggagtgtgctcctctcaaggtctca 6384013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 24256845 - 24256787
Alignment:
Q  44 ttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||||||| |||| |||| |||| | |||||||| ||||||||||||||    
T  24256845 ttctcaaggtctcaagttcgattctctctggtgtcaatttaggtaggttagtttagctt 24256787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 12188353 - 12188268
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || |||||||| ||||||| |||| ||||  ||||| ||||  | |||||||||||||||    
T  12188353 ttggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagctt 12188268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 24762458 - 24762379
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtt 96  Q
    |||||||||||||||||| |||||||| ||| ||||||| | ||| |||  || |||||||| |||| |||||| |||||    
T  24762458 gttggcttgggaccttggtgtgtgctcctcttaaggtcttaggttcgatcctccccggtgccaattttggtgggctagtt 24762379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 24334076 - 24333990
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||| ||| ||| ||||| || ||||||||||| |||  ||| || |||||||| |||| |||||| |||||||||||    
T  24334076 gttggcttgggacattgcagtatgctcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagctt 24333990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 24507587 - 24507505
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagttta 98  Q
    ||||||||||||||||||||| |||| || ||||||||||   |||  ||| ||||||||  | |||||||||||||||||||    
T  24507587 gttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgggttagttta 24507505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 10007212 - 10007257
Alignment:
Q  31 ttggagtgtgctcttctcaaggtctcaagtttgattttctccggtg 76  Q
    ||||||||| ||| |||||||||||||||||||||| |||| ||||    
T  10007212 ttggagtgtcctcctctcaaggtctcaagtttgattatctctggtg 10007257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 17149635 - 17149586
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||| |||||| |||||||||||||| ||||||||||||| ||| ||||    
T  17149635 gttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 17149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 31623041 - 31622956
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || ||| |||||||| |||||| |  |||||||| | |||| |||||| || ||||||||    
T  31623041 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagctt 31622956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 33549130 - 33549215
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || ||| |||||||| ||| |||| |||| | |||| ||||||||| | || ||||||||    
T  33549130 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagctt 33549215  T

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Target: chr5 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 8278325 - 8278240
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||| | ||||||||||| || || || |||||||||||||| ||||||||||| ||||||||||| || ||||||||    
T  8278325 ttggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagctt 8278240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 15485470 - 15485421
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  15485470 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgatt 15485421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 16457836 - 16457918
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttag 99  Q
    ||||||||||||||||||||||||| || |||||||||||| |||  ||| || |||||||| ||||  ||||| ||||||||    
T  16457836 ttggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttgcgtgggctagtttag 16457918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 16173034 - 16172985
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||| ||||    
T  16173034 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgatt 16172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 23270701 - 23270628
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 90  Q
    |||||||||||| |||||||| ||||| ||  ||||||||||||| ||||| ||||| |||| |||| ||||||    
T  23270701 gttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtggg 23270628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 31669075 - 31669014
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcc 78  Q
    ||||||||||||||||||||| ||||| ||||||||||| | ||| |||| || ||||||||    
T  31669075 gttggcttgggaccttggagtctgctcctctcaaggtcttaggttcgattctccccggtgcc 31669014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 33025498 - 33025547
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    |||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  33025498 gttggcttgggatcttggagtgtgctcctctcaagatctcaactttgatt 33025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 11064540 - 11064600
Alignment:
Q  23 ttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttctccggtgcccattt 83  Q
    |||||||||||||||||| |||||||||||||| ||||| | ||  |||||||||| ||||    
T  11064540 ttgggaccttggagtgtgttcttctcaaggtcttaagttcgtttacctccggtgccaattt 11064600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 18596051 - 18595963
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    |||||||| ||||| ||| ||||||| || ||||||||| | ||| ||||||||| |||||| ||||  | ||||||||||||||||||    
T  18596051 ttggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggttagtttagcttatt 18595963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 5943932 - 5943893
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctc 56  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  5943932 gttgacttgggaccttggagtgtgctcctctcaaggtctc 5943893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 32340384 - 32340349
Alignment:
Q  20 ggcttgggaccttggagtgtgctcttctcaaggtct 55  Q
    |||||||||||||||||||||||| |||||||||||    
T  32340384 ggcttgggaccttggagtgtgctcctctcaaggtct 32340349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 3315244 - 3315329
Alignment:
Q  21 gcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagcttatt 105  Q
    ||||| |||||||||||| |||| || ||||||||||| ||| |||| || | |||||| ||||||| || ||| |||||||||||    
T  3315244 gcttgagaccttggagtgcgctcctcctcaaggtctcaggttcgattctcccaggtgccaatttaggcggattaatttagcttatt 3315329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 14495851 - 14495770
Alignment:
Q  22 cttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||| || ||||||||||| || || ||||||||  ||||||| |||||| |||| |||||| |||| |||||||||||    
T  14495851 cttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagtttagctt 14495770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 14656694 - 14656645
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 66  Q
    ||||||||| ||||||||||| ||||| ||||||||||||| ||| ||||    
T  14656694 gttggcttgagaccttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 16773837 - 16773918
Alignment:
Q  22 cttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||| ||||||||||| || || |||||||| ||| |||| |||| | |||| ||||||||||| || ||||||||    
T  16773837 cttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagctt 16773918  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 17648977 - 17649014
Alignment:
Q  21 gcttgggaccttggagtgtgctcttctcaaggtctcaa 58  Q
    |||||||||||||||||||| || ||||||||||||||    
T  17648977 gcttgggaccttggagtgtgatcctctcaaggtctcaa 17649014  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 21549187 - 21549103
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || || || |||||||||| |||||||||  ||||| |||| |  |||||||||||||||    
T  21549187 ttggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt-gaggggttagtttagctt 21549103  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 21589314 - 21589399
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| ||||| |||| || ||| | |||||| ||| ||||  ||| |||||| ||||||||||| |||||||||||    
T  21589314 ttggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggctagtttagctt 21589399  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 21701146 - 21701097
Alignment:
Q  53 tctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| |||| |||||||| || |||||||||||||| ||||||||    
T  21701146 tctcaagttcgattctctccggtaccgatttaggtgggttaatttagctt 21701097  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 25343270 - 25343307
Alignment:
Q  30 cttggagtgtgctcttctcaaggtctcaagtttgattt 67  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  25343270 cttggattgtgctcttttcaaggtctcaagtttgattt 25343307  T

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Target: scaffold0065 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 12214 - 12300
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||  ||| |||| |||  | |||||||||| ||||||||||||    
T  12214 gttggcttgggaccttggagtttgctcctcctcaaggtctaaagttaaattctctctggtatcaatttaggtggattagtttagctt 12300  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 15373 - 15288
Alignment:
Q  18 ttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||||| |||||||||| || ||| |||||||| ||| |||| |||| | |||| ||||||||||| || ||||||||    
T  15373 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagctt 15288  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 15827 - 15742
Alignment:
Q  18 ttggcttgggaccttggagtgtgctcttc-tcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    |||||||||||  ||||||| ||||| || |||||||||||||||||||| ||  ||||||| |||| |||||| || ||||||||    
T  15827 ttggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaatttagctt 15742  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 240936 - 240883
Alignment:
Q  17 gttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgattttct 70  Q
    ||||| |||||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  240936 gttggtttgggatcttggagtatgctcctctcaaggtctcatgtttgattttct 240883  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 1778 - 1860
Alignment:
Q  17 gttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtgggttagttta 98  Q
    ||||||||||||||||||||| |||| || ||||||||||   |||  ||| ||||||||  | |||||||||||||||||||    
T  1778 gttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgggttagttta 1860  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 12764 - 12813
Alignment:
Q  53 tctcaagtttgattttctccggtgcccatttaggtgggttagtttagctt 102  Q
    ||||||||| |||| |||||||| || |||||||||||||| ||||||||    
T  12764 tctcaagttcgattctctccggtaccgatttaggtgggttaatttagctt 12813  T

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