View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_low_100 (Length: 238)
Name: NF12023_low_100
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_low_100 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33195585 - 33195807
Alignment:
| Q |
1 |
aaaccatttgaaacttcttgatgttgtacaaaggtgattttcataagattcnnnnnnngttgtattagcaaatatttggcccaatactatcacataacgt |
100 |
Q |
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| T |
33195585 |
aaaccatttgaaacttcttgatgttgtacaaaggtgattttcataagattctttttttgttgtattagcaaatatttggcccaatactatcacataacgt |
33195684 |
T |
|
| Q |
101 |
gacatatatattttcaataaaaaggacaaggtgtttcgctacacatttcattcaaaagctggttaaggtaatgttttaattaagattttctgaaattgtt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33195685 |
gacatatatattttcaataaaaaggacaaggtgtttggctacacatttcattcaaaagctggttaaggtaatgttttaattaagattttctgaaattgtt |
33195784 |
T |
|
| Q |
201 |
acacataggtgcatgcttgattt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
33195785 |
acacataggtgcatgcttgattt |
33195807 |
T |
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