View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12023_low_51 (Length: 324)
Name: NF12023_low_51
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12023_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 6 - 309
Target Start/End: Original strand, 26933721 - 26934024
Alignment:
| Q |
6 |
agaagcagagacagtagaaagcacatcagaagcagctctacgttgctccaacagagaggtgaagggaaagattcatcaacagttgaacattgacgaagga |
105 |
Q |
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|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
26933721 |
agaaacagaaacagtagaaagcacatcagaagcagctctacgttgctccaacagagaggtgaagggaaagattcatcaacagttgaacattgatgaagga |
26933820 |
T |
|
| Q |
106 |
aactgtagtttcaatttagaggactataacattaataacaatgttccactattgccctactggcctgctgctgtaccttataactatcacccttaattat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26933821 |
aactgtagtttcaatttagaggactataacattaataacaatgttccactattgccctactggcctgctgctgtaccttataactatcacccttaattat |
26933920 |
T |
|
| Q |
206 |
attattaagtaatctttgtttgaagtttgaacaacagctttatgtgagtctgagattaattaattttactggttgtgtagattagaatcgataatagtag |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26933921 |
attattaagtaatctttgtttgaagtttgaacaacagctttatgtgagtctgagattaattaattttactggttgtgtagattagaatcgataatagtag |
26934020 |
T |
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| Q |
306 |
tagt |
309 |
Q |
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|||| |
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| T |
26934021 |
tagt |
26934024 |
T |
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