View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12023_low_58 (Length: 312)

Name: NF12023_low_58
Description: NF12023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12023_low_58
NF12023_low_58
[»] chr4 (74 HSPs)
chr4 (1-298)||(35369339-35369630)
chr4 (5-92)||(35370446-35370533)
chr4 (37-294)||(12073407-12073668)
chr4 (1-275)||(33089857-33090137)
chr4 (53-285)||(26699342-26699580)
chr4 (41-285)||(12119557-12119812)
chr4 (1-130)||(32091457-32091586)
chr4 (37-283)||(50673750-50673999)
chr4 (7-261)||(46703485-46703744)
chr4 (37-255)||(379395-379617)
chr4 (1-285)||(22882653-22882940)
chr4 (1-285)||(22934317-22934604)
chr4 (37-257)||(8665423-8665646)
chr4 (1-127)||(26175700-26175825)
chr4 (44-257)||(8648161-8648377)
chr4 (42-266)||(34112837-34113062)
chr4 (106-174)||(35370073-35370141)
chr4 (43-127)||(44570429-44570513)
chr4 (1-127)||(5429658-5429783)
chr4 (1-127)||(54199970-54200095)
chr4 (1-127)||(56178701-56178826)
chr4 (1-89)||(47038511-47038598)
chr4 (37-175)||(5349925-5350061)
chr4 (37-136)||(21688264-21688362)
chr4 (1-127)||(36994503-36994628)
chr4 (37-127)||(24969127-24969216)
chr4 (37-127)||(27417029-27417118)
chr4 (45-294)||(33989867-33990121)
chr4 (7-256)||(40632430-40632682)
chr4 (7-294)||(2209698-2209994)
chr4 (5-127)||(6677451-6677574)
chr4 (7-127)||(54883005-54883124)
chr4 (9-124)||(26364223-26364337)
chr4 (1-127)||(48142441-48142567)
chr4 (212-294)||(3786156-3786239)
chr4 (1-127)||(3913427-3913552)
chr4 (1-127)||(9927522-9927647)
chr4 (1-127)||(12745500-12745625)
chr4 (1-127)||(34570478-34570603)
chr4 (43-118)||(34788847-34788922)
chr4 (37-294)||(41964430-41964689)
chr4 (37-127)||(35662456-35662545)
chr4 (1-127)||(41961396-41961522)
chr4 (37-127)||(46147455-46147544)
chr4 (1-127)||(48143021-48143147)
chr4 (210-294)||(55085334-55085418)
chr4 (219-294)||(32091642-32091716)
chr4 (210-265)||(26364428-26364483)
chr4 (1-127)||(29999870-29999995)
chr4 (1-88)||(38811291-38811378)
chr4 (210-261)||(44570287-44570338)
chr4 (210-294)||(6199758-6199844)
chr4 (5-127)||(6542243-6542366)
chr4 (97-199)||(21703827-21703929)
chr4 (1-127)||(48893702-48893831)
chr4 (1-114)||(52095438-52095551)
chr4 (1-114)||(52467430-52467543)
chr4 (1-73)||(5871799-5871871)
chr4 (59-124)||(53345254-53345319)
chr4 (1-89)||(55085466-55085553)
chr4 (43-127)||(22628956-22629042)
chr4 (223-285)||(41961603-41961666)
chr4 (45-127)||(45687246-45687328)
chr4 (210-256)||(27416896-27416942)
chr4 (1-114)||(52082733-52082846)
chr4 (43-127)||(5370147-5370231)
chr4 (210-283)||(46703740-46703813)
chr4 (244-295)||(6719781-6719833)
chr4 (43-127)||(12743989-12744072)
chr4 (43-127)||(12744111-12744194)
chr4 (43-127)||(12745378-12745461)
chr4 (43-127)||(13992357-13992439)
chr4 (210-266)||(35662632-35662688)
chr4 (212-256)||(50262627-50262671)
[»] chr5 (39 HSPs)
chr5 (43-285)||(316783-317031)
chr5 (1-292)||(10054708-10055005)
chr5 (1-127)||(35616148-35616274)
chr5 (7-127)||(40147246-40147365)
chr5 (7-257)||(213450-213707)
chr5 (1-127)||(25412740-25412864)
chr5 (37-155)||(33831695-33831812)
chr5 (1-124)||(13695757-13695880)
chr5 (1-124)||(16452059-16452181)
chr5 (220-283)||(4160801-4160864)
chr5 (5-127)||(13488186-13488307)
chr5 (1-127)||(39468613-39468738)
chr5 (1-127)||(13239730-13239855)
chr5 (7-127)||(28278301-28278420)
chr5 (48-133)||(30802854-30802939)
chr5 (1-127)||(533748-533873)
chr5 (43-197)||(3075652-3075805)
chr5 (1-127)||(42309999-42310124)
chr5 (1-127)||(42428494-42428619)
chr5 (37-266)||(27637533-27637766)
chr5 (48-126)||(32579250-32579328)
chr5 (37-127)||(38747020-38747109)
chr5 (43-128)||(3325934-3326019)
chr5 (26-127)||(33906094-33906195)
chr5 (43-127)||(10700712-10700795)
chr5 (43-114)||(16641013-16641085)
chr5 (48-127)||(32609561-32609640)
chr5 (5-127)||(42426299-42426420)
chr5 (97-197)||(30793211-30793310)
chr5 (7-241)||(5058032-5058267)
chr5 (43-127)||(16409495-16409579)
chr5 (43-127)||(26177902-26177986)
chr5 (1-114)||(30683000-30683110)
chr5 (43-127)||(37439162-37439245)
chr5 (1-127)||(8566010-8566135)
chr5 (212-282)||(33905927-33905998)
chr5 (1-127)||(36074107-36074234)
chr5 (75-127)||(8445768-8445820)
chr5 (43-127)||(18441712-18441796)
[»] chr2 (43 HSPs)
chr2 (1-286)||(30217944-30218234)
chr2 (52-176)||(24398087-24398212)
chr2 (53-237)||(33648202-33648391)
chr2 (43-127)||(42261549-42261633)
chr2 (1-127)||(2334482-2334607)
chr2 (9-127)||(7597074-7597193)
chr2 (1-127)||(36318073-36318198)
chr2 (1-127)||(38312219-38312344)
chr2 (43-283)||(35446788-35447031)
chr2 (1-127)||(42362331-42362456)
chr2 (1-127)||(4503197-4503322)
chr2 (214-294)||(7451314-7451394)
chr2 (1-89)||(24885640-24885728)
chr2 (43-127)||(36988140-36988223)
chr2 (43-127)||(41454255-41454339)
chr2 (1-127)||(723808-723933)
chr2 (1-127)||(17057433-17057558)
chr2 (1-127)||(17085416-17085541)
chr2 (1-127)||(33162514-33162639)
chr2 (37-156)||(42288145-42288263)
chr2 (37-127)||(1631796-1631885)
chr2 (1-127)||(5723320-5723444)
chr2 (1-114)||(11690480-11690593)
chr2 (1-127)||(45099733-45099858)
chr2 (1-126)||(36205730-36205853)
chr2 (1-201)||(17490138-17490331)
chr2 (219-285)||(16676430-16676497)
chr2 (1-127)||(29867848-29867973)
chr2 (1-114)||(11151667-11151780)
chr2 (1-127)||(12123648-12123773)
chr2 (37-127)||(45726944-45727033)
chr2 (43-127)||(6595070-6595153)
chr2 (43-127)||(32289584-32289668)
chr2 (43-179)||(42019881-42020020)
chr2 (1-155)||(11067284-11067437)
chr2 (212-278)||(17450770-17450837)
chr2 (1-89)||(14633927-14634015)
chr2 (43-127)||(26353204-26353288)
chr2 (1-89)||(34139872-34139960)
chr2 (43-127)||(4484394-4484478)
chr2 (68-124)||(7815340-7815395)
chr2 (43-127)||(34811285-34811369)
chr2 (219-294)||(42288003-42288078)
[»] chr6 (27 HSPs)
chr6 (37-283)||(5043642-5043892)
chr6 (37-294)||(17763005-17763267)
chr6 (37-294)||(17758038-17758300)
chr6 (1-127)||(28137472-28137597)
chr6 (37-127)||(2973003-2973092)
chr6 (7-127)||(21588916-21589035)
chr6 (7-127)||(21593649-21593768)
chr6 (64-294)||(26800629-26800863)
chr6 (1-127)||(5406264-5406388)
chr6 (1-127)||(5410589-5410713)
chr6 (43-127)||(3808772-3808856)
chr6 (43-127)||(186735-186819)
chr6 (1-127)||(4045402-4045528)
chr6 (1-127)||(9183095-9183220)
chr6 (1-155)||(33211221-33211374)
chr6 (1-127)||(5413458-5413582)
chr6 (32-118)||(12221176-12221262)
chr6 (7-127)||(26830187-26830307)
chr6 (1-127)||(31404739-31404863)
chr6 (1-153)||(33160390-33160542)
chr6 (1-127)||(25073547-25073673)
chr6 (1-127)||(30834600-30834726)
chr6 (37-254)||(22424758-22424980)
chr6 (26-133)||(5740055-5740162)
chr6 (212-285)||(3808604-3808678)
chr6 (67-127)||(2908503-2908563)
chr6 (219-294)||(5739885-5739961)
[»] chr3 (57 HSPs)
chr3 (1-127)||(35138769-35138895)
chr3 (37-283)||(46860489-46860740)
chr3 (1-127)||(51398793-51398918)
chr3 (1-127)||(20937635-20937761)
chr3 (1-175)||(39127526-39127702)
chr3 (1-127)||(5236520-5236645)
chr3 (1-127)||(40734477-40734602)
chr3 (10-120)||(8166527-8166636)
chr3 (37-127)||(34491227-34491316)
chr3 (7-127)||(30236110-30236229)
chr3 (1-125)||(5373210-5373336)
chr3 (43-127)||(7762286-7762369)
chr3 (1-127)||(7764446-7764568)
chr3 (1-127)||(22835066-22835191)
chr3 (7-285)||(43403640-43403928)
chr3 (212-285)||(5270566-5270640)
chr3 (1-127)||(9581262-9581386)
chr3 (1-127)||(45095143-45095267)
chr3 (220-294)||(49228738-49228811)
chr3 (1-127)||(29196450-29196576)
chr3 (1-156)||(44700513-44700667)
chr3 (1-127)||(760826-760951)
chr3 (1-127)||(4569931-4570056)
chr3 (212-294)||(20937851-20937934)
chr3 (44-127)||(25491031-25491114)
chr3 (1-127)||(39153425-39153550)
chr3 (1-127)||(40735362-40735487)
chr3 (212-294)||(49199357-49199439)
chr3 (1-127)||(53921567-53921692)
chr3 (37-285)||(36018867-36019116)
chr3 (7-127)||(43401865-43401985)
chr3 (98-285)||(55301871-55302064)
chr3 (70-127)||(2020187-2020244)
chr3 (2-127)||(26323137-26323262)
chr3 (5-153)||(37408441-37408588)
chr3 (7-127)||(54593689-54593808)
chr3 (43-127)||(54739017-54739101)
chr3 (1-119)||(5433947-5434067)
chr3 (37-265)||(6095521-6095752)
chr3 (43-127)||(46173378-46173461)
chr3 (13-127)||(4055827-4055941)
chr3 (1-127)||(19683953-19684078)
chr3 (212-294)||(43401689-43401771)
chr3 (1-127)||(44331524-44331649)
chr3 (1-127)||(5258208-5258334)
chr3 (1-127)||(9636190-9636316)
chr3 (1-73)||(26386598-26386670)
chr3 (55-127)||(1313868-1313940)
chr3 (43-127)||(29810889-29810972)
chr3 (212-285)||(1683667-1683742)
chr3 (106-193)||(33191914-33192001)
chr3 (26-127)||(3148054-3148155)
chr3 (1-127)||(5260387-5260513)
chr3 (43-124)||(29813084-29813164)
chr3 (37-73)||(23392026-23392062)
chr3 (43-127)||(24635278-24635362)
chr3 (219-263)||(35138625-35138669)
[»] chr7 (53 HSPs)
chr7 (7-294)||(8359208-8359500)
chr7 (44-285)||(22328290-22328538)
chr7 (37-283)||(48599238-48599487)
chr7 (1-175)||(5116583-5116758)
chr7 (7-127)||(2361036-2361155)
chr7 (43-127)||(23565125-23565209)
chr7 (1-127)||(27347796-27347921)
chr7 (43-127)||(43363535-43363621)
chr7 (1-127)||(48491558-48491683)
chr7 (1-197)||(4253522-4253718)
chr7 (37-127)||(29608752-29608841)
chr7 (1-158)||(47673976-47674132)
chr7 (219-294)||(1360064-1360140)
chr7 (1-156)||(26417295-26417449)
chr7 (44-127)||(1113679-1113761)
chr7 (1-127)||(8153321-8153446)
chr7 (1-127)||(31733033-31733158)
chr7 (210-291)||(8452094-8452175)
chr7 (1-126)||(31518774-31518898)
chr7 (7-294)||(3258980-3259270)
chr7 (37-126)||(4508771-4508859)
chr7 (7-127)||(22269958-22270077)
chr7 (1-127)||(23555018-23555144)
chr7 (1-166)||(4178753-4178917)
chr7 (1-128)||(31105456-31105582)
chr7 (1-127)||(3904680-3904807)
chr7 (1-127)||(4586140-4586265)
chr7 (1-127)||(30024796-30024921)
chr7 (1-127)||(35853893-35854018)
chr7 (37-127)||(6431986-6432075)
chr7 (37-114)||(2390297-2390374)
chr7 (43-127)||(36574579-36574664)
chr7 (1-156)||(14069868-14070022)
chr7 (1-127)||(36146472-36146597)
chr7 (212-294)||(2390479-2390561)
chr7 (1-127)||(14379925-14380050)
chr7 (1-127)||(18126623-18126748)
chr7 (1-127)||(38671286-38671411)
chr7 (1-115)||(43864223-43864337)
chr7 (37-127)||(496047-496136)
chr7 (7-127)||(34310780-34310899)
chr7 (44-127)||(19502200-19502282)
chr7 (1-127)||(47676200-47676325)
chr7 (1-120)||(1360221-1360342)
chr7 (1-73)||(24526013-24526086)
chr7 (1-127)||(29991033-29991157)
chr7 (62-127)||(6360016-6360080)
chr7 (81-126)||(27073875-27073920)
chr7 (81-126)||(27204393-27204438)
chr7 (31-166)||(43504178-43504315)
chr7 (212-294)||(29608930-29609013)
chr7 (43-127)||(39731389-39731473)
chr7 (43-127)||(41649075-41649157)
[»] chr1 (59 HSPs)
chr1 (37-266)||(47255257-47255493)
chr1 (7-294)||(47115156-47115448)
chr1 (49-294)||(6808479-6808729)
chr1 (13-285)||(22079307-22079580)
chr1 (37-166)||(23555290-23555418)
chr1 (7-266)||(29136232-29136495)
chr1 (7-256)||(13547020-13547272)
chr1 (37-283)||(7482134-7482384)
chr1 (7-257)||(13548930-13549183)
chr1 (13-127)||(16914238-16914353)
chr1 (5-127)||(41360897-41361018)
chr1 (1-127)||(12318586-12318712)
chr1 (7-283)||(37168282-37168562)
chr1 (4-127)||(44455142-44455264)
chr1 (1-127)||(8550851-8550976)
chr1 (7-176)||(42297989-42298158)
chr1 (1-154)||(4552674-4552826)
chr1 (1-127)||(3156844-3156969)
chr1 (1-127)||(49918329-49918454)
chr1 (1-155)||(50169246-50169399)
chr1 (1-127)||(15820286-15820411)
chr1 (1-127)||(28220290-28220415)
chr1 (1-127)||(28265618-28265743)
chr1 (1-127)||(31659217-31659342)
chr1 (1-127)||(50167239-50167364)
chr1 (37-127)||(19754510-19754599)
chr1 (43-119)||(3460716-3460793)
chr1 (7-127)||(11348683-11348802)
chr1 (37-153)||(34603591-34603707)
chr1 (43-127)||(4535544-4535628)
chr1 (1-155)||(37559904-37560058)
chr1 (1-124)||(46064897-46065019)
chr1 (1-127)||(834231-834356)
chr1 (1-127)||(1833501-1833626)
chr1 (1-127)||(28223485-28223610)
chr1 (7-89)||(37033174-37033256)
chr1 (37-127)||(193626-193715)
chr1 (5-127)||(1050507-1050629)
chr1 (7-65)||(6398631-6398688)
chr1 (37-127)||(19752701-19752790)
chr1 (1-127)||(25652065-25652191)
chr1 (37-127)||(31925771-31925860)
chr1 (37-127)||(40122262-40122351)
chr1 (44-124)||(928043-928123)
chr1 (4-124)||(37282758-37282877)
chr1 (1-89)||(37503655-37503743)
chr1 (43-127)||(196972-197055)
chr1 (47-127)||(3189355-3189434)
chr1 (47-127)||(3198172-3198251)
chr1 (47-127)||(3207011-3207090)
chr1 (212-294)||(25652279-25652362)
chr1 (212-294)||(37032961-37033043)
chr1 (7-89)||(37879012-37879094)
chr1 (1-119)||(9109491-9109609)
chr1 (210-283)||(34603754-34603827)
chr1 (59-127)||(2263038-2263106)
chr1 (43-127)||(13316416-13316499)
chr1 (43-127)||(20762693-20762776)
chr1 (43-103)||(36683711-36683771)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-199)||(27433-27633)
[»] chr8 (41 HSPs)
chr8 (1-201)||(11711989-11712191)
chr8 (162-294)||(10240263-10240400)
chr8 (1-155)||(4731637-4731790)
chr8 (5-127)||(19491763-19491884)
chr8 (1-155)||(27811257-27811410)
chr8 (1-127)||(43036402-43036527)
chr8 (37-294)||(11384000-11384260)
chr8 (1-127)||(42498172-42498298)
chr8 (1-155)||(3303706-3303859)
chr8 (1-155)||(15212765-15212918)
chr8 (37-127)||(40328794-40328884)
chr8 (1-176)||(7597592-7597769)
chr8 (44-294)||(3772214-3772467)
chr8 (1-127)||(33352129-33352254)
chr8 (37-283)||(42434894-42435144)
chr8 (1-155)||(44353772-44353925)
chr8 (3-128)||(3231858-3231984)
chr8 (37-127)||(30143355-30143444)
chr8 (37-127)||(40221760-40221849)
chr8 (7-127)||(4283509-4283628)
chr8 (1-127)||(4162479-4162601)
chr8 (1-120)||(41266947-41267067)
chr8 (1-127)||(8965755-8965880)
chr8 (5-127)||(9765728-9765849)
chr8 (1-114)||(30291585-30291699)
chr8 (1-127)||(34254395-34254519)
chr8 (150-285)||(11137152-11137294)
chr8 (44-159)||(1822313-1822429)
chr8 (44-159)||(1856758-1856874)
chr8 (43-127)||(12702698-12702781)
chr8 (1-155)||(1345407-1345560)
chr8 (1-127)||(18141800-18141924)
chr8 (53-127)||(10240185-10240259)
chr8 (1-127)||(34256571-34256695)
chr8 (3-193)||(29796317-29796510)
chr8 (1-127)||(31218235-31218361)
chr8 (43-114)||(30909389-30909459)
chr8 (223-285)||(40328980-40329043)
chr8 (210-268)||(40221936-40221994)
chr8 (43-127)||(1746283-1746365)
chr8 (184-266)||(2999723-2999809)
[»] scaffold0002 (2 HSPs)
scaffold0002 (43-127)||(490384-490468)
scaffold0002 (1-127)||(434511-434637)
[»] scaffold0236 (1 HSPs)
scaffold0236 (97-294)||(10564-10765)
[»] scaffold0176 (1 HSPs)
scaffold0176 (43-294)||(17895-18150)
[»] scaffold0197 (1 HSPs)
scaffold0197 (5-285)||(1296-1580)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-136)||(80338-80466)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-127)||(11536-11661)
[»] scaffold0066 (1 HSPs)
scaffold0066 (37-127)||(20479-20568)
[»] scaffold0053 (1 HSPs)
scaffold0053 (43-127)||(25074-25158)


Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 35369630 - 35369339
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  35369630 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactct--- 35369534  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgata 200  Q
      || ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||      
T  35369533 --atctctttgtaaagaactcattgatggtgaattgaagaggtcgatctctccc-atagtaggtcattgttggaccaaacaaggtaaacatttcttgacg 35369437  T
Q  201 ttgctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatctagaattgttgtttgtg 298  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35369436 ttgctttcttttactctctttatcttgtttattttttgctttgattatagttttgctttacacttgtttctagattagatctagaattgttgtttgtg 35369339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 35370533 - 35370446
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaa 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35370533 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaa 35370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 12073407 - 12073668
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| ||||||| ||  ||||| ||||||| ||||||| ||||||||||||||  || ||||    
T  12073407 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 12073505  T
Q  137 aataggtcgatctctc-cccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||  ||| || |||||||||||||||| ||| |||| ||||||||||| | |||    ||||  |||||||| |||||||||||||    
T  12073506 gagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgttta 12073605  T
Q  232 ttctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    ||||||| || |||||| |||||| | | ||||| ||||||||||||||||||| |||||||||    
T  12073606 ttctttggttagattgtggttttgttatgcacttggtttctagattagatctag-attgttgtt 12073668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 33089857 - 33090137
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||| | |||| |||| || |||| ||||||||| |||||||||||| ||||||| |||| ||||||| ||| |||  ||||    
T  33089857 aatcattgagtgtcttgttcatgggaagagattgagagatgaatagaaattatgtttgttcttggagagcttgttgaagctaatttattataaccatttt 33089956  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttc-ttga 198  Q
    |||| ||| ||||||||||||||||||  || |||  | || || |||||||| | | || |||| |||||||||||  || || |||||| ||| ||||    
T  33089957 gtatctctctgtaaagaactcattgatagtggattagagagatcaatctctcctctagagtaggttattgttggaccggactagataaacaattctttga 33090056  T
Q  199 tattgctttcttt----tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagat 275  Q
      ||| | |||||    | |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||  |||||||    
T  33090057 agttgttctcttttctctgctctctttatcttgtttattttttggttcgattgtggttttgctttacacttggatctagat 33090137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 285
Target Start/End: Complemental strand, 26699580 - 26699342
Alignment:
Q  53 ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctct- 151  Q
    ||||||||||| ||||||||| |||| ||||||||||  ||||||||||||| ||||||||||||||||||| || ||| |||| | || || ||||||     
T  26699580 ggtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctcta 26699481  T
Q  152 ccccatagcaggtcattgttggaccaaacaaggtaaacatttctt------gatattgctttcttttactctttttatcttgtttattctttgcttcgat 245  Q
     |||| || |||||||||||||||| |||  |||||| |||||||      | |||  ||||  |||||||| |||||||||||||||||||| ||| ||    
T  26699480 tcccagagtaggtcattgttggaccgaactgggtaaaaatttcttagtgccgttat--cttttctttactctctttatcttgtttattctttggttcaat 26699383  T
Q  246 tgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    | | |||||||| | ||||| | ||||||||||||||||||    
T  26699382 tatggttttgctatgcacttggattctagattagatctaga 26699342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 41 - 285
Target Start/End: Original strand, 12119557 - 12119812
Alignment:
Q  41 gagtagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaat 139  Q
    |||||||||||| ||||||||||| |||| |||  |||| ||||||||||  ||| ||||||||| ||||||||||||||||||| ||  || |||| |     
T  12119557 gagtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggag 12119656  T
Q  140 aggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaac-atttcttgatattg----ctttcttt----tactctttttatcttgttt 230  Q
    || || ||||||||| | || |||||||||||||||| ||| |||| ||| |||||||| | |||    || | |||    |||||| ||||||||||||    
T  12119657 agatcaatctctcccaagagtaggtcattgttggaccgaactaggtgaacaatttcttggtgttgtcatctattttttctctactctctttatcttgttt 12119756  T
Q  231 attctttgcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    | |||||| | ||||||| |||||||| | ||||| ||||||||||||||||||||    
T  12119757 agtctttggtccgattgtggttttgctatgcacttagtttctagattagatctaga 12119812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 32091457 - 32091586
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| |||||||||| | |  | |||||||||    |||||||||||||||||||||| ||| ||| |||||||||||||||  |||||||||    
T  32091457 aatcattgagtctcttgttcatgggagaagattgggaaaatgctagaaattaggtttgttcttggagagtttgttgaaactaatttcttgtaactctttt 32091556  T
Q  101 gtatttctttgtaaagaactcattgatgat 130  Q
    |||| |||||||||||||| ||||||||||    
T  32091557 gtatctctttgtaaagaacacattgatgat 32091586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 283
Target Start/End: Complemental strand, 50673999 - 50673750
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    |||||||||||||||||| ||| |||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||||||||||  || ||||    
T  50673999 aaatgagtagaaattaggattg-tctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattg 50673902  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| ||| || ||||||  |||||||| ||| |||| ||||||||||| | |||    ||||  |||||||| |||||||||||||    
T  50673901 gagagatcaatctctcctccagagtaggtca-agttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgttta 50673803  T
Q  232 ttctttgc-ttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    ||| |||| || |||||| |||||||| | |||||| || |||| ||||||||    
T  50673802 ttccttgctttggattgtggttttgctatgcacttgattatagactagatcta 50673750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 46703485 - 46703744
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| ||||||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | ||||||||    
T  46703485 tgagtgtcttgttcattggt-gagattgggaaaatgagtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtat 46703583  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg 203  Q
     ||||||| ||||||||||| ||  || |||| | || || |||||||| ||| || |||||||||||||||| ||   ||| ||||||||||| | |||    
T  46703584 ctctttgt-aagaactcatttatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaacatttcttggtgttg 46703682  T
Q  204 ----ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgctttac 261  Q
        ||||  |||||||| ||||||||||||||  |||| || |||||| ||||||||||||    
T  46703683 ttatcttttctttactctctttatcttgtttatcatttggttagattgtggttttgctttac 46703744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 255
Target Start/End: Original strand, 379395 - 379617
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||  ||| | |||||||  |||||| ||||||| ||||||  || ||||    
T  379395 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgt-aagaactaattgatagtggattg 379493  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| ||| || |||||||||||||||| |||  | | ||||||||||| | |||    ||||  |||||||| |||||||||||||    
T  379494 gagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctttactctctttatcttgttta 379593  T
Q  232 ttctttgcttcgattgtagttttg 255  Q
    | ||||| || |||||| ||||||    
T  379594 tcctttggttagattgtggttttg 379617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 22882940 - 22882653
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||| ||||||||| | |||| ||||  |||||  || ||||||||||||||||||| ||| ||| |||| ||||||||||  ||| |||||    
T  22882940 aatcattgagtgccttgttcatggaaagagattgaaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaaccctttt 22882841  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgata 200  Q
    |||| |||| ||||||||||||||| |  || |||  | |  || ||||| ||||  || |||||||||||||||| |||  | ||||||||||||| |     
T  22882840 gtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctc-ccccggagtaggtcattgttggaccgaactggataaacatttcttggtg 22882742  T
Q  201 ttgctttct-tttactctttttatcttgtttattctttg--cttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    ||  ||| | | |||||| |||||||| |||||||||||   ||| ||||| ||||| ||||| |||| |||| ||||||| |||||||    
T  22882741 ttattttttctatactctctttatcttatttattctttgatattccattgtggttttactttaaacttggtttttagattatatctaga 22882653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 22934604 - 22934317
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||| ||||||||| | |||| ||||  |||||  || ||||||||||||||||||| ||| ||| |||| ||||||||||  ||| |||||    
T  22934604 aatcattgagtgccttgttcatggaaagagattgaaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttgtaaccctttt 22934505  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgata 200  Q
    |||| |||| ||||||||||||||| |  || |||  | |  || ||||| ||||  || |||||||||||||||| |||  | ||||||||||||| |     
T  22934504 gtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctc-ccccggagtaggtcattgttggaccgaactggataaacatttcttggtg 22934406  T
Q  201 ttgctttct-tttactctttttatcttgtttattctttg--cttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    ||  ||| | | |||||| |||||||| |||||||||||   ||| ||||| ||||| ||||| |||| |||| ||||||| |||||||    
T  22934405 ttattttttctatactctctttatcttatttattctttgatattccattgtggttttactttaaacttggtttttagattatatctaga 22934317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 257
Target Start/End: Original strand, 8665423 - 8665646
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| | ||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  8665423 aaatgggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 8665521  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| ||| || ||||||  |||||||||||| ||||  |||||||||| | |||    ||||  |||||||| |||||||||||||    
T  8665522 gagagatcaatctctcctccagagtaggtca-agttggaccaaactaggtgtacatttcttggtgttgttatcttttctttactctctttatcttgttta 8665620  T
Q  232 ttctttgcttcgattgtagttttgct 257  Q
    ||| ||| || |||||| ||||||||    
T  8665621 ttccttggttggattgtggttttgct 8665646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26175825 - 26175700
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || | |||||||||| |||||||| ||||||||| |||||||||||||||  ||| | ||    
T  26175825 aatcattgagtgtcttgttcattggt-gagattgggaaaatggggagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatt 26175727  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  26175726 tgtatctctttgt-aagaactcattgat 26175700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 257
Target Start/End: Original strand, 8648161 - 8648377
Alignment:
Q  44 tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggt 143  Q
    ||||||||||| |||||| | ||||| ||| |||| ||||||||||| ||| | ||||||| ||||||| ||||||||||||||  || |||| | || |    
T  8648161 tagaaattagggttgttcattgtgagtttgttgaagctaatttcttataacccatttgtatctctttgt-aagaactcattgatattggattggagagat 8648259  T
Q  144 cgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgtttattctttg 238  Q
    | |||||||| ||| || ||||||  ||||||||||||  ||| ||||||||||| | |||    ||||  |||||||| |||||||||||||||| |||    
T  8648260 caatctctcctccagagtaggtca-agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttg 8648358  T
Q  239 cttcgattgtagttttgct 257  Q
     || |||||| ||||||||    
T  8648359 gttggattgtggttttgct 8648377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 34112837 - 34113062
Alignment:
Q  42 agtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatag 141  Q
    ||||||||||| ||||||||| || ||||||| |||| |||||||| |  ||| |||||| || ||||||||||||||||||||||  |||| || | ||    
T  34112837 agtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagag 34112936  T
Q  142 gtcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaac-atttcttgatatt-gctttcttttactctttttatcttgtttattctttg 238  Q
     ||  ||||||||| |||| |||||||||||||||| ||   ||||||| |||  ||| | ||  ||||  | |||||  ||||||||||||||||||||    
T  34112937 atc--tctctcccctatagtaggtcattgttggaccgaatttggtaaacaattatttggtgttctcttttctctactcactttatcttgtttattctttg 34113034  T
Q  239 cttcgattgtagttttgctttacacttg 266  Q
      | |||||||||||| |||||||||||    
T  34113035 acttgattgtagtttttctttacacttg 34113062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 35370141 - 35370073
Alignment:
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttgga 174  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||||| | ||||||||||||||    
T  35370141 tctttgtaaagaactcattgatggtgaattgaagaggtagatctctccccatggtaggtcattgttgga 35370073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 44570513 - 44570429
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| ||||||| |||| ||||||| |||||||||||||||  |||  |||||||| ||||||||||||||||||||||    
T  44570513 gtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattgat 44570429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 5429658 - 5429783
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| ||||||||||||||| || ||||| ||||||||| |||| ||||||||||  ||| | ||    
T  5429658 aatcattgagtgtcttgttcattggt-gagattgggaaaatgagtagaaattagggttattcttcgtgagcttgttgaagctaatttcttgtaacccatt 5429756  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| | ||||| ||||||||||||||    
T  5429757 tgtatctatttgt-aagaactcattgat 5429783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 54200095 - 54199970
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  54200095 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 54199997  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  54199996 tgtatctctttgt-aagaactcattgat 54199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 56178826 - 56178701
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  | |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| ||||    
T  56178826 aatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttt 56178728  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  56178727 tgtatctctttgt-aagaactcattgat 56178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47038598 - 47038511
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    ||||||||||||||||||||||||   || ||||| ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  47038598 aatcattgagtgtcttgttcattggt-gagattggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttctt 47038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 5349925 - 5350061
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| ||||||||||||||||||||| |||| ||||  ||| |||||| |||  | ||| ||||||| |||||||||||||||| ||||| |||||  |    
T  5349925 aaatgggtagaaattaggtttgttctttgtgaacttgtcgaagctaattccttgtagctcgtttgtatctctttgtaaagaactcgttgataatgaagcg 5350024  T
Q  137 aataggtcgatctctccccatagcaggtcattgttggac 175  Q
     | || ||  |||||||||| || |||||||||||||||    
T  5350025 gagagatc--tctctccccagagtaggtcattgttggac 5350061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 21688264 - 21688362
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||||||||||| ||  ||||| ||||||| |||| |  |||||||||||||| ||||||||    
T  21688264 aaatgggtagaaattagggttgttctttgtgagcttgttgaaactaattttttgtaactcatttgtatctcttcg-gaagaactcattgataatgaattg 21688362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36994503 - 36994628
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||| | |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  36994503 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatt 36994601  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  36994602 tgtatccctttgt-aagaactcattgat 36994628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 24969127 - 24969216
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||||||| ||||||||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||| ||||||    
T  24969127 aaatgggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactaattgat 24969216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 27417118 - 27417029
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| |||||||||| |||||||||||    
T  27417118 aaatgtgtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgat 27417029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 294
Target Start/End: Original strand, 33989867 - 33990121
Alignment:
Q  45 agaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggtc 144  Q
    ||||| ||||||||||||| | ||| ||| |||| ||||||||||  ||  ||||||||| |||||||||| ||||| || ||  || |||| | || ||    
T  33989867 agaaactaggtttgttcttagagagtttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagatc 33989966  T
Q  145 gatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttctttt----actctttttatcttgtttattctttgc 239  Q
     |||||||| ||| || |||||||| |||||   |||  ||||||||||||||| | ||  | | ||||    ||||| ||||||||||||||||||||     
T  33989967 aatctctccaccagagtaggtcattcttggattgaactgggtaaacatttcttggtgttattatattttttctactctctttatcttgtttattctttgg 33990066  T
Q  240 ttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    ||| ||| | | |||||| | ||||| ||||||||||||||||||| |||||||||    
T  33990067 ttcaattctggatttgctatgcacttggtttctagattagatctag-attgttgtt 33990121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 40632430 - 40632682
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||  |||||||| ||||||||| |||| ||||||||||  |||   |||||||     
T  40632430 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatc 40632528  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| | | || | ||||  |||||||| |||  ||||||||||||||| | |||     
T  40632529 tctttgt-aagaactcattgatagtggattggagagatcaatctctcctctaaagtaagtca-agttggaccgaactgggtaaacatttcttggtgttgt 40632626  T
Q  204 ---ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgc 256  Q
       |||| ||||||||| |||||||||||||| ||||| ||  ||||| |||||||    
T  40632627 tatcttttttttactctctttatcttgtttatcctttggttgaattgtggttttgc 40632682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 2209698 - 2209994
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| || ||||| ||||||||| |||| ||||||||||  ||| | ||||||||    
T  2209698 tgagtgtcttgttcattgtt-gagattgggaaaatgggtagaaattagggtttttctttgtgagcttgttgaagctaatttcttgtaacccattttgtat 2209796  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaac-atttcttgatatt 202  Q
     ||||||| ||||||||||||||  || |||| | || |  |||||||| ||| || ||||||| |||||||| |||  ||| ||| || ||||| | ||    
T  2209797 ctctttgt-aagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgtt 2209895  T
Q  203 gctttct-------tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    | | |||       | |||||| ||||||||||||||  |||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  2209896 gttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 2209994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 6677451 - 6677574
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgtt--cttggtgagcttgatgaaactaatttcttaaaactcttttgt 102  Q
    ||||||| |||||||| | | |||| ||||| ||||| ||||||||||||||| ||  ||||| ||||||| |||| ||||||||||  ||| |||||||    
T  6677451 attgagtctcttgttcttgggaagaaattggaaaatg-gtagaaattaggttttttttcttggagagcttgttgaagctaatttcttgtaacccttttgt 6677549  T
Q  103 atttctttgtaaagaactcattgat 127  Q
    || ||||||||||||| || |||||    
T  6677550 atatctttgtaaagaagtctttgat 6677574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 54883005 - 54883124
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| ||||| || ||||||||| |||| ||||||||||  ||| | |||||||     
T  54883005 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 54883103  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  54883104 tctttgt-aagaactcattgat 54883124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 26364223 - 26364337
Alignment:
Q  9 agtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttc 107  Q
    ||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||||| ||||||| ||    
T  26364223 agtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctc 26364321  T
Q  108 tttgtaaagaactcatt 124  Q
    ||||| |||||||||||    
T  26364322 tttgt-aagaactcatt 26364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48142567 - 48142441
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaa-atgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    |||||||||||||||||  ||||| | || |||||||| |||| ||||||||||| ||||||||| ||||||||| |||| ||| ||||||  ||| |||    
T  48142567 aatcattgagtgtcttgcccattg-atgagattgggaacatga-tagaaattagggtttgttctttgtgagcttgttgaagctagtttcttgtaaccctt 48142470  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
     | ||| ||||||||||||||||||||||    
T  48142469 gtatatctctttgtaaagaactcattgat 48142441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 3786156 - 3786239
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||| ||||||||||| |||||||| |||||||||| ||||| ||||||||| ||| ||| ||||||||||||  |||||||    
T  3786156 tactctctttatcttgttcattctttggttcgattgtaattttgttttacacttggttgctatattagatctagatatgttgtt 3786239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3913427 - 3913552
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| ||||||||||||||   ||||||| ||||| ||| |||| ||||||||||  ||| | ||    
T  3913427 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgagtagaaattagagctgttctttgtgagtttgttgaagctaatttcttttaacccatt 3913525  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  3913526 tgtatatctttgt-aagaactcattgat 3913552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9927647 - 9927522
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||| |||||||||| |||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  9927647 aatcactgagtgtcttattcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 9927549  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  9927548 tgtatctctttgt-aagaactcattgat 9927522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12745625 - 12745500
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||| ||||| || |||||||||||| |||||||| |||| ||||   |||||||||||||  ||| | ||    
T  12745625 aatcattgagtgtcttgttcattggc-gagattaggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatt 12745527  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  12745526 tgtatctctttgt-aagaactcattgat 12745500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34570603 - 34570478
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag-tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  || ||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| |  |    
T  34570603 aatcattgagtgtcttgttcattggt-gagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaat 34570505  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  34570504 tgtatctctttgt-aagaactcattgat 34570478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 34788922 - 34788847
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaa 118  Q
    |||||||||||| ||| |||||| ||||||| ||||  |||||||||  ||||||||||||| |||||||||||||    
T  34788922 gtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgtatctctttgtaaagaa 34788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 41964430 - 41964689
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaatt 135  Q
    ||||| |||||||||||| |||||||| ||||||||| | || ||||||| ||  ||| | ||||||||  |||||||| ||||||||||||  || |||    
T  41964430 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacccattttgtatccctttgtaa-gaactcattgatagtggatt 41964528  T
Q  136 gaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttcttttact--ctttttatcttgtttat 232  Q
    | | || || |||||||| ||| || ||||||  |||||||| |||  ||| | ||||||||| | ||| | ||||||  |  || | ||||||||||||    
T  41964529 ggagagatcaatctctcctccagagtaggtcaa-gttggaccgaactgggtgagcatttcttggtgttgttatcttttctttactctctatcttgtttat 41964627  T
Q  233 tctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
     ||||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  41964628 cctttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 41964689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 35662456 - 35662545
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| ||||||||  |||| ||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||||||||||    
T  35662456 aaatgggtagaaattagggttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgat 35662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41961396 - 41961522
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| ||||||||||   |||| ||||| ||| |||||||||||| |||||||| ||| ||||||| |    ||||||||||  ||   ||||    
T  41961396 aatcattgagtctcttgttcatgagaagagattggaaaaagagtagaaattaagtttgttcatggagagcttggtagtgctaatttcttgtaatcatttt 41961495  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||||||||| ||||||||    
T  41961496 gtatctctttgtaaagaagtcattgat 41961522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 46147544 - 46147455
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||| | ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| |||||||| |||||    
T  46147544 aaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactctttgat 46147455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 48143021 - 48143147
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  |  |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| |||    
T  48143021 aatcattgagtgtcttgttcattggt-gagattgggaaaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaaccctt 48143119  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||  | ||||||||||||||    
T  48143120 ttgtatctcttcat-aagaactcattgat 48143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 55085418 - 55085334
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||||| |||||||||||||||| ||| || |||||| |||||||| | ||||| ||||||| ||||||||||| |||||||||    
T  55085418 tttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatctag-attgttgtt 55085334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 32091642 - 32091716
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacacttgttt-ctagattagatctagaattgttgtt 294  Q
    |||||||||||||||||||  ||| ||||| ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  32091642 tttatcttgtttattctttagttcaattgtggtttt-ctttacacttgtttgctagattagatcta-aattgttgtt 32091716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 26364428 - 26364483
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt 265  Q
    |||||||| |||||||||||||||| |||||| |||||| |||||||| |||||||    
T  26364428 tttactctctttatcttgtttattccttgcttggattgtggttttgctatacactt 26364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29999995 - 29999870
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||| |||||||||||||||||||   || ||||||||| | |||||||||||| |||||||| |||| | ||   || ||||||||||  |||||||||    
T  29999995 aatcgttgagtgtcttgttcattggt-gagattgggaaaagggtagaaattagggttgttctttgtgaacatgtcaaagctaatttcttgtaactctttt 29999897  T
Q  101 gtat-ttctttgtaaagaactcattgat 127  Q
    |||| || ||||| ||||||||||||||    
T  29999896 gtatcttttttgt-aagaactcattgat 29999870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38811378 - 38811291
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttct 88  Q
    ||||||||||| |||||||||| | |||| |||| |||||| ||| |||||| |||||||||||| ||| ||| ||||  ||||||||    
T  38811378 aatcattgagtctcttgttcatagaaagagattgagaaatgggtacaaattaagtttgttcttggagagtttgttgaatttaatttct 38811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 44570338 - 44570287
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttac 261  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| ||||||    
T  44570338 tttactctttttatcttatttattctttggtttgattgtagttttactttac 44570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 6199844 - 6199758
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttt-tgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||||| |||||||||||| ||||||| ||||||||| |||| |||||| || || |||  ||||||||||||||| ||||||||    
T  6199844 tttactctctttatcttgtttgttctttggttcgattgtggtttgtgctttgcaattagttgttagattagatctagatttgttgtt 6199758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 6542366 - 6542243
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttg 101  Q
    ||||||||||||||||||||   || |||||||||  |  |||||||||||| ||||||||| ||||||||| |||||||||||||||   |  ||||||    
T  6542366 attgagtgtcttgttcattggg-gagattgggaaaaaatggtagaaattaggatttgttctttgtgagcttgttgaaactaatttcttgttagccttttg 6542268  T
Q  102 tatttctttgtaaagaactcattgat 127  Q
    ||| ||||||| |||||||| |||||    
T  6542267 tatctctttgt-aagaactcgttgat 6542243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 21703929 - 21703827
Alignment:
Q  97 ttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttctt 196  Q
    |||||||| | |||||||||||||||||||   || |||| | |  || |||| ||||||||| ||||||||||| |||| |||  ||||||||||||||    
T  21703929 ttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatccccatagtaggtcattgtttgaccgaactgggtaaacatttctt 21703830  T
Q  197 gat 199  Q
    |||    
T  21703829 gat 21703827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48893831 - 48893702
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttc----ttggtgagcttgatgaaactaatttcttaaaact 95  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| ||||||    || ||||||||| |||| ||||||||||  ||||    
T  48893831 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttcattgtttgtgagcttgttgaagctaatttcttgtaact 48893733  T
Q  96 cttttgtatttctttgtaaagaactcattgat 127  Q
    | ||||||| ||||||| |||||||| |||||    
T  48893732 catttgtatctctttgt-aagaactctttgat 48893702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52095551 - 52095438
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||    
T  52095551 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatt 52095453  T
Q  100 tgtatttctttgtaa 114  Q
    ||||| |||||||||    
T  52095452 tgtatctctttgtaa 52095438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52467543 - 52467430
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    ||  |||||||| || ||||||||||||||||||||| ||||||||| |||| ||||| ||||  ||| | ||    
T  52467543 aatcattgagtgtcttgttcatttgt-gaggttgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatt 52467445  T
Q  100 tgtatttctttgtaa 114  Q
    |||||  ||||||||    
T  52467444 tgtatcactttgtaa 52467430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5871799 - 5871871
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttg 73  Q
    ||||||||||||||||||||||||   || ||||| ||| || ||||||||||||||||||||| |||||||||    
T  5871799 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattaggtttgttctttgtgagcttg 5871871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 53345254 - 53345319
Alignment:
Q  59 ttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcatt 124  Q
    ||||| ||||||||| |||||||||||||||  ||| ||||| ||| | |||||||||||||||||    
T  53345254 ttctttgtgagcttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaactcatt 53345319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 55085553 - 55085466
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    ||||||||| ||||||||||||||   || ||||| ||||  |||||||||| | |||||||| ||||||||| |||| ||||||||||    
T  55085553 aatcattgactgtcttgttcattg-gtgagattggaaaataggtagaaattaaggttgttctttgtgagcttgttgaagctaatttctt 55085466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 22629042 - 22628956
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttg--tatttctttgtaaagaactcattgat 127  Q
    |||||||||||| ||| |||||| ||||||  ||||  |||||||||| ||||||||||  | | |||| |||||||||||||||||    
T  22629042 gtagaaattaggattgctcttggagagcttattgaagttaatttcttataactcttttgcatctctcttagtaaagaactcattgat 22628956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 41961603 - 41961666
Alignment:
Q  223 tcttgtttattctttgcttcgattgtagttttgctttaca-cttgtttctagattagatctaga 285  Q
    |||||||||||||||| || |||||| ||||||||||| | || ||| ||||||||||||||||    
T  41961603 tcttgtttattctttggtttgattgtggttttgctttaaacctggttactagattagatctaga 41961666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 45687328 - 45687246
Alignment:
Q  45 agaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||| |||||| |||||||||   || ||||||||||| ||||| ||||||| | ||||| ||||||||||||||    
T  45687328 agaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatctatttgt-aagaactcattgat 45687246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 27416942 - 27416896
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgc 256  Q
    |||||||| |||||||||||||||||||| || |||||| |||||||    
T  27416942 tttactctctttatcttgtttattctttggttggattgtggttttgc 27416896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52082846 - 52082733
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||| ||||||||||||||   || ||||||||| || ||||||| |||| |||||||| |||| ||||   |||||||||||||  ||| | ||    
T  52082846 aatcattgactgtcttgttcattggt-gagattgggaaaatgggtagaaactagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatt 52082748  T
Q  100 tgtatttctttgtaa 114  Q
    ||||| |||||||||    
T  52082747 tgtatctctttgtaa 52082733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 5370231 - 5370147
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaa-ctaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   ||| ||||||||||  ||| ||||||||| ||||||| ||||||||||||||    
T  5370231 gtagaaattagggttgttctttgtgaacttgtcaaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgat 5370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 46703740 - 46703813
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    |||||||| |||||||||||||| ||||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  46703740 tttactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgattatagaataggtcta 46703813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 6719781 - 6719833
Alignment:
Q  244 attgtagttttgctttacacttg-tttctagattagatctagaattgttgttt 295  Q
    ||||| |||||||||| |||||| |||||||||||||||||||  ||||||||    
T  6719781 attgtggttttgctttgcacttggtttctagattagatctagatctgttgttt 6719833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 12744072 - 12743989
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  12744072 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 12743989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 12744194 - 12744111
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  12744194 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 12744111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 12745461 - 12745378
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  12745461 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 12745378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 13992439 - 13992357
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||||||||||||| || |||| ||||||||||||||    
T  13992439 gtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctc-ttgt-aagaactcattgat 13992357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 35662632 - 35662688
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg 266  Q
    |||||||| |||||||||||||||| ||| || |||||| |||||||| | ||||||    
T  35662632 tttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttg 35662688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 50262671 - 50262627
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgc 256  Q
    ||||||||||||||||||||||| || ||| |||||| |||||||    
T  50262671 tactctttttatcttgtttattccttacttggattgtggttttgc 50262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 285
Target Start/End: Original strand, 316783 - 317031
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||  ||  ||||||||| |||||||||||||||||||||| ||| || | |  |     
T  316783 gtagaaattaggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggatcggaggga 316882  T
Q  143 tcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttcttt----tactctttttatcttgtttattcttt 237  Q
    || |||||||||| | || |||||||||||||||| |||  |||||||| |||||  | ||| | |||||    |||||| ||||| |||||||||||||    
T  316883 tcaatctctcccctagagtaggtcattgttggaccgaacttggtaaacaattctttgtgttgttctcttttccctactctctttattttgtttattcttt 316982  T
Q  238 gcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    | ||| ||||| |||||||||||||||| ||| |||||| |||||||||    
T  316983 ggttcaattgtggttttgctttacacttggttgctagataagatctaga 317031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 10055005 - 10054708
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| | |||||||| | |||| |||| |||||| |||||||||| |||||||||||  ||| ||| |||| ||||||||||| ||| |||||    
T  10055005 aatcattgagtctattgttcatagaaagagattgagaaatgggtagaaattatgtttgttcttgaagagtttgttgaagctaatttcttataac-ctttt 10054907  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttctt--- 196  Q
    |||| ||||||||| ||||||||||||  || |||| | |  || || ||||||| | ||  ||| ||||||||||||||| ||||||||   ||||       
T  10054906 gtatctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaattgttggaccaaactaggtaaacgactctttgg 10054807  T
Q  197 -gatattgctttcttt-tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttg 292  Q
     | | || | || | | |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  10054806 tgttgttccattttctgtactctttttatcttgtttattttttgcttcgattgtaattttgctttacacttggttgctagattagatctagatttgttg 10054708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35616148 - 35616274
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| |||||||||  | |||| |||| |||||||||||||||||||||||||||||| ||||| | | ||  |||||||||  ||| |||||    
T  35616148 aatcattgagtctcttgttcacgggaagagattgagaaatgagtagaaattaggtttgttcttggagagctcgtttaagttaatttcttgtaaccctttt 35616247  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||||||||||||||||||||||||||    
T  35616248 gtatttctttgtaaagaactcattgat 35616274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 40147246 - 40147365
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| |||||||     
T  40147246 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatc 40147344  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  40147345 tctttgt-aagaactcattgat 40147365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 213450 - 213707
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | |||||||     
T  213450 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatc 213548  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| |||||| ||||||   ||||||| |||  ||| ||||||||||| | |||     
T  213549 tctttgt-aagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacatttcttggtgttgt 213647  T
Q  204 ---ctttctttta--ctctttttatcttgtttattctttgc-ttcgattgtagttttgct 257  Q
       ||||| ||||  |||| |||||||||||||||| |||| || |||||| ||||||||    
T  213648 tatctttcctttactctctctttatcttgtttattccttgcttttgattgtggttttgct 213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25412740 - 25412864
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || ||||||||| | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||||    
T  25412740 aatcattgagtgtcttgttcattggt-gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 25412838  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  25412839 gtatctctttgt-aagaactcattgat 25412864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 33831695 - 33831812
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  33831695 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 33831793  T
Q  137 aataggtcgatctctcccc 155  Q
    || || || ||||||||||    
T  33831794 aagagatcaatctctcccc 33831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13695880 - 13695757
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| |||| ||| ||| | || ||||||||| | ||| |||||||| ||||||||| ||||||||| | || ||||||||||  ||| ||||    
T  13695880 aatcattgagtatctttttctttgga-gagattgggaaaagggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttt 13695782  T
Q  100 tgtatttctttgtaaagaactcatt 124  Q
    ||||| |||||||||||||||||||    
T  13695781 tgtatctctttgtaaagaactcatt 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16452059 - 16452181
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgg-gaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||| | || |||||  ||||| |||||||||| ||||||||||  |||||||| |||| ||||||||||  ||| | ||    
T  16452059 aatcattgagtgtcttgttcattg-atgagattggaaaaatgggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatt 16452157  T
Q  100 tgtatttctttgtaaagaactcatt 124  Q
    ||||| ||||||| |||||||||||    
T  16452158 tgtatctctttgt-aagaactcatt 16452181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 4160801 - 4160864
Alignment:
Q  220 ttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||| || |||||||||||||    
T  4160801 ttatcttgtttattctttggttcgattatggttttgctttacacttggttgtagattagatcta 4160864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 13488186 - 13488307
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||  | | ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||||||    
T  13488186 attgagtgtcttgttcattggta-agattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgta 13488284  T
Q  104 tttctttgtaaagaactcattgat 127  Q
    | ||||||| ||||||||||||||    
T  13488285 tctctttgt-aagaactcattgat 13488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39468738 - 39468613
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  39468738 aatcattgagtgtcttgttcattagt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 39468640  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  39468639 tgtatctctttgt-aagaactcattgat 39468613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13239730 - 13239855
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa--tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || ||||| |||  || |||||||||||| || ||||| |||| |||| |||| ||||||||||  |||||||    
T  13239730 aatcattgagtgtcttgttcattggt-gagattggaaaaaatg-gtagaaattagggtttttctttgtgaacttgttgaagctaatttcttgtaactctt 13239827  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||| ||||||||||||||    
T  13239828 ttgtatctctttgt-aagaactcattgat 13239855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 28278301 - 28278420
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || |||||| ||||| |||||||||| | |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  28278301 tgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 28278399  T
Q  106 tctttgtaaagaactcattgat 127  Q
    |||||||||| |||||||||||    
T  28278400 tctttgtaaa-aactcattgat 28278420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 30802854 - 30802939
Alignment:
Q  48 aattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaa 133  Q
    |||||||||||||||| ||||||||| |||||||||||| ||  ||  ||||||||| | |||||||||||||| ||||| |||||    
T  30802854 aattaggtttgttctttgtgagcttgttgaaactaatttattgtaatccttttgtatctatttgtaaagaactcgttgataatgaa 30802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 533748 - 533873
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||| |||||||||||||||   || ||||||||| || |||||||||||| ||| |||| ||||||||| |||| ||||||| ||  ||| | ||    
T  533748 aatcattgcgtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttggtctttgtgagcttgttgaagctaattttttgtaacccatt 533846  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  533847 tgtatctctttgt-aagaactcattgat 533873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 3075805 - 3075652
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||  ||| | ||||||| | ||||| ||||| || |||||  ||||||| | ||     
T  3075805 gtagaaattaggtttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatctttttgt-aagaattcgttgatagtgaattggagaga 3075707  T
Q  143 tcgatctctccc-catagcaggtcattgttggaccaaacaaggtaaacatttcttg 197  Q
    || ||||||||| ||||| ||||||  |||||||||||   ||| |||||||||||    
T  3075706 tcaatctctccctcatagtaggtca-agttggaccaaattgggtgaacatttcttg 3075652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42310124 - 42309999
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||| ||||||   || |||| ||||| | |||||||| | ||||| |||| ||||||||| |||| ||||||||||  ||||||||    
T  42310124 aatcattgagtgtcttgctcattggt-gagattgagaaattgggtagaaatcaagtttgatctttgtgagcttgttgaagctaatttcttgtaactcttt 42310026  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||| ||||||    
T  42310025 tgtatctctttgt-aagaacttattgat 42309999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42428619 - 42428494
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||| | || ||||| |||| |||| |||| ||||||||||  ||| | ||    
T  42428619 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattatggtttttctttgtgaacttgttgaagctaatttcttgtaacccatt 42428521  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  42428520 tgtatctctttgt-aagaactcattgat 42428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 266
Target Start/End: Complemental strand, 27637766 - 27637533
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaatt 135  Q
    ||||| |||||||||||| ||||||||  |||||||| | |||||||||||||  ||| | |||||||| ||||||| ||||||||||| ||  || |||    
T  27637766 aaatgggtagaaattagggttgttctttatgagcttgtttaaactaatttcttgtaacccattttgtatctctttgt-aagaactcatt-atagtggatt 27637669  T
Q  136 gaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttt 230  Q
    | | || || ||||||||  || || |||||||||||||||| |||  ||| || |||||||| | |||    ||||  |||||||| ||||||||||||    
T  27637668 ggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaatatttcttggtgttgttatcttttctttactctctttatcttgttt 27637569  T
Q  231 attctttgcttcgattgtagttttgctttacacttg 266  Q
    |||| ||  || |||||| |||||||| | ||||||    
T  27637568 attccttagttggattgtggttttgctatgcacttg 27637533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 32579250 - 32579328
Alignment:
Q  48 aattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattga 126  Q
    |||||||||| || |||| ||||||  |||||||||||||||  ||||||| ||||| |||||||||| ||||||||||    
T  32579250 aattaggtttatttttggagagcttattgaaactaatttcttgtaactcttatgtatgtctttgtaaataactcattga 32579328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 38747020 - 38747109
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| |||||| ||| |||||||||||    
T  38747020 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaaa-aactcattgat 38747109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 3325934 - 3326019
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatg 128  Q
    ||||||||||| ||||||||||  ||||||| |||| ||||||||||  |||  || ||||| ||||||||||||||||| |||||    
T  3325934 gtagaaattagttttgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatg 3326019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 33906195 - 33906094
Alignment:
Q  26 aagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattg 125  Q
    |||| |||| |||||| ||| |||||||||| || ||||| |||||||  ||| |||| |||||  ||  ||||||||| ||||||||||||||||||||    
T  33906195 aagaaattgtgaaatgggtataaattaggttagtgcttggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattg 33906096  T
Q  126 at 127  Q
    ||    
T  33906095 at 33906094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 10700795 - 10700712
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||||||||||| | ||||||| |||| |||| |||||| |||  |||||||| |||||  |||||||||||||||    
T  10700795 gtagaaattaggtttgttcttagagagcttgttgaagctaa-ttcttataacatttttgtatctctttaaaaagaactcattgat 10700712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 16641085 - 16641013
Alignment:
Q  43 gtagaaattag-gtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaa 114  Q
    ||||||||||| |||||||||| ||||||||| |||| || |||||| | ||||||||||||| |||||||||    
T  16641085 gtagaaattagtgtttgttctttgtgagcttgttgaagctgatttctgataactcttttgtatctctttgtaa 16641013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 32609561 - 32609640
Alignment:
Q  48 aattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||| ||||| | ||| ||| ||||  |||||||||  ||||||||||||||||||||||||||||| ||||||    
T  32609561 aattaagtttattctttgagagtttgttgaagttaatttcttgtaactcttttgtatttctttgtaaagaacttattgat 32609640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 42426420 - 42426299
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| ||||  ||| |||| ||||||||||  ||| | ||||||    
T  42426420 attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgcaacccatttgta 42426322  T
Q  104 tttctttgtaaagaactcattgat 127  Q
    | ||||||| ||||||||||||||    
T  42426321 tctctttgt-aagaactcattgat 42426299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 30793211 - 30793310
Alignment:
Q  97 ttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttct 195  Q
    |||||||| ||||||||||||||| ||||||  |||| || | || ||  ||||||||| | || | |||||||||||||| ||||||||||||||||||    
T  30793211 ttttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttct 30793308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 5058032 - 5058267
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || |||||| ||||| |||||||||||| |||||||  ||||||||| |||| ||| ||||||  | | | |||||||     
T  5058032 tgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattagggttgttct--gtgagcttgttgaagctattttcttgtatcccatttgtatc 5058128  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| | | || ||||||  |||||||| |||  ||| ||||||||||| | |||     
T  5058129 tctttgt-aagaactcattgatagtggattggagagatcaatctctcctctagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttgt 5058226  T
Q  204 ---ctttcttttactctttttatcttgtttattctttgctt 241  Q
       ||||  |||||||| |||||||||||||||| ||||||    
T  5058227 tatcttttctttactctctttatcttgtttattccttgctt 5058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 16409495 - 16409579
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||||||||||||| |||||   ||||||||||||||    
T  16409495 gtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 16409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 26177902 - 26177986
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||||||||||||| |||||   ||||||||||||||    
T  26177902 gtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 26177986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30683110 - 30683000
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || |||||||||  | ||||||||||||   |||||| |||| |||| |||| ||||||||||  ||| ||||    
T  30683110 aatcattgagtgtcttgttcatttgt-gagattgggaaaaagggtagaaattagg---gttctttgtgaacttgttgaagctaatttcttgtaacccttt 30683015  T
Q  100 tgtatttctttgtaa 114  Q
    |||||||||||||||    
T  30683014 tgtatttctttgtaa 30683000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 37439162 - 37439245
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   ||  |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  37439162 gtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaactcttttgtatctctttgt-aagaactcattgat 37439245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8566135 - 8566010
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || |||| |||| || |||||| |||||||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  8566135 aatcattgagtgtcttgttcatttgt-gagattgagaaaatgggtagaacttaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 8566037  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  || ||| ||||||||||||||    
T  8566036 tgtatccctctgt-aagaactcattgat 8566010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 33905998 - 33905927
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatct 282  Q
    |||||| |||||||||||||||| ||| ||||| ||| ||||| ||||||||||| || |||||||| ||||    
T  33905998 tactctctttatcttgtttattcattggttcgaatgtggttttactttacacttgattgctagattaaatct 33905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 36074234 - 36074107
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga----gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc 96  Q
    ||||||||||||||||||||||||   || |||||||||  |    |||||||||||| |||||||| | || ||||   || ||||||||||  |||||    
T  36074234 aatcattgagtgtcttgttcattggt-gagattgggaaaaaaaagggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaactc 36074136  T
Q  97 ttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||| ||||||  ||||||||||||||    
T  36074135 ttttgtatctctttg--aagaactcattgat 36074107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 8445768 - 8445820
Alignment:
Q  75 tgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||||||  ||| ||||||||||||||| ||||||||| ||||||    
T  8445768 tgaagctaatttcttgtaacccttttgtatttctttataaagaactaattgat 8445820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 18441796 - 18441712
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||| | |||| ||||   || ||||||||||  ||||||||||||| |||||   ||||||||||||||    
T  18441796 gtagaaattagggttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 18441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 30218234 - 30217944
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||| | | || |||| |||||| |||||| |||||||||||||||| ||||||  |||| ||||||||||  |||  ||||    
T  30218234 aatcattgagtgtcttgttcatggaaggagattgagaaatgggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccatttt 30218135  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctct-ccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgat 199  Q
    |||| |||||||||| || ||||||||  ||  ||||| || || ||| || ||||| || | |||||||||||||  |||  ||||||||||| ||| |    
T  30218134 gtatctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttggactgaactcggtaaacattttttggt 30218035  T
Q  200 attgctttcttt---tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaa 286  Q
     | ||| | |||   |||||| |||||||||||||||||||| || |||||| ||| || ||||||||| ||||||||||| |||||||||    
T  30218034 gtagctctttttctctactctctttatcttgtttattctttggtttgattgtggttgtgttttacacttggtttctagattggatctagaa 30217944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 24398087 - 24398212
Alignment:
Q  52 aggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctct 151  Q
    |||||||||||| ||||||||| |||| ||||||||||  ||| ||||||||| |||||||||||||||||||||| ||| |||| | || || ||||||    
T  24398087 aggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctct 24398186  T
Q  152 -ccccatagcaggtcattgttggacc 176  Q
     |||||||| ||||||||||||||||    
T  24398187 cccccatagtaggtcattgttggacc 24398212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 237
Target Start/End: Original strand, 33648202 - 33648391
Alignment:
Q  53 ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctc 152  Q
    ||||||||||| ||||||||| |||| |||||||| |  ||| ||||||||||||||||||||||||||||||||   | |||| | || || |||||||    
T  33648202 ggtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctc 33648301  T
Q  153 c-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttcttt----tactctttttatcttgtttattcttt 237  Q
    | ||| || |||||||||||||||| |||  ||||||||||| ||| | ||| | |||||    |||||| |||||||||||||||||||    
T  33648302 ctccagagtaggtcattgttggaccgaactgggtaaacatttattggtgttgttgtcttttctctactctctttatcttgtttattcttt 33648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 42261633 - 42261549
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  42261633 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgat 42261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2334607 - 2334482
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||| ||| |||||||| |||| |||| |||| |||||||||   ||||||||    
T  2334607 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaataagggttgttctttgtgaacttgttgaagctaatttctagtaactcttt 2334509  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  2334508 tgtatctctttgt-aagaactcattgat 2334482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 7597193 - 7597074
Alignment:
Q  9 agtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttc 107  Q
    |||||||||||||| | |||| |||| ||||||| |||||||||||||| |||| |  ||| ||||  ||||||||||||||  || |||||||||| |     
T  7597193 agtgtcttgttcatgggaagagattgagaaatgaatagaaattaggttttgttccttatgaacttgtcgaaactaatttcttgtaagtcttttgtatctt 7597094  T
Q  108 tttgtaaagaactcattgat 127  Q
    ||||||||||||||||||||    
T  7597093 tttgtaaagaactcattgat 7597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 36318198 - 36318073
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||| |||||||| ||||||||| |||||||||||| ||  ||| | ||    
T  36318198 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatt 36318100  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  36318099 tgtatctctttgt-aagaactcattgat 36318073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38312219 - 38312344
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||||||||||||||  ||| | ||    
T  38312219 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatt 38312317  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| |||| |||||||||    
T  38312318 tgtatctctttgt-aagatctcattgat 38312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 283
Target Start/End: Complemental strand, 35447031 - 35446788
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || |||| | ||     
T  35447031 gtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagaga 35446933  T
Q  143 tcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgtttattcttt 237  Q
    ||  ||||||| ||| || ||||||  |||||||| |||  ||| ||||||||||| | |||    ||||  |||||||| |||||||||||||| ||||    
T  35446932 tcactctctcctccagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgcttt 35446834  T
Q  238 gcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    | ||  ||||| |||||||| | |||||| || |||| ||||||||    
T  35446833 ggttgaattgtggttttgctatgcacttgattatagactagatcta 35446788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42362331 - 42362456
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  42362331 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 42362429  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  42362430 tgtatccctttgt-aagaactcattgat 42362456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4503322 - 4503197
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    |||||||||||||||||||||||| | || |||||||||  |  |||||||||||| |||||||| |||| ||||   || ||||||||||  |||||||    
T  4503322 aatcattgagtgtcttgttcattgga-gagattgggaaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactctt 4503224  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  4503223 ttgtatctctttg--aagaactcattgat 4503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 7451314 - 7451394
Alignment:
Q  214 ctctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||| |||||||||||||||||||| ||||||||| |||||| | | |||||| |||||||||||||||||| |||||||||    
T  7451314 ctctctttatcttgtttattctttggttcgattgtggttttgttatgcacttgttttctagattagatctag-attgttgtt 7451394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24885640 - 24885728
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    |||||||||||||||||||||||   | | ||||||||| |||||||||||||||||||||||| ||||||||| | || ||||||||||    
T  24885640 aatcattgagtgtcttgttcatttgtaaa-attgggaaaatgagtagaaattaggtttgttctttgtgagcttgtttaagctaatttctt 24885728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 36988223 - 36988140
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||  |||||||||   |||||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  36988223 gtagaaattagggttgttctatgtgagcttgtcaaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgat 36988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 41454255 - 41454339
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||| |||||| || | ||||||| |||| |||||||||   ||||||||||||| | ||||||||||||||||||||    
T  41454255 gtagaaattagatttgttttttgagagcttgttgaagctaatttctagcaactcttttgtatatatttgtaaagaactcattgat 41454339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 723933 - 723808
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||| ||| || ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  723933 aatcattgagtgtcttgttcatttgt-gagattggaaaactgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 723835  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  723834 tgtatccctttgt-aagaactcattgat 723808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17057558 - 17057433
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||| |||||||| |  |||||| |||| ||||||| ||  ||||| ||    
T  17057558 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatt 17057460  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  17057459 tgtatctctttgt-aagaactcattgat 17057433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17085541 - 17085416
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||| |||||||| |  |||||| |||| ||||||| ||  ||||| ||    
T  17085541 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatt 17085443  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  17085442 tgtatctctttgt-aagaactcattgat 17085416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33162639 - 33162514
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||| |||||||||||||||||   || ||| ||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  33162639 aatcatcgagtgtcttgttcattggt-gaaattaggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatt 33162541  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||| ||| ||||||||||||||    
T  33162540 tgtatctctctgt-aagaactcattgat 33162514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 42288263 - 42288145
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||| | |||||||| ||||||||| |||| ||||||| ||  ||| | ||||||||||||||| |||| ||||||||| ||| ||||    
T  42288263 aaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatttctttgt-aagagctcattgataatggattg 42288165  T
Q  137 aataggtcgatctctcccca 156  Q
     | || || |||||||||||    
T  42288164 gagagatcaatctctcccca 42288145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 1631885 - 1631796
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||| ||||  ||| | ||||||| ||||||| ||||||||||||||    
T  1631885 aaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttgt-aagaactcattgat 1631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5723444 - 5723320
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || |||| |||| | |||||||||||| |||||||| |||| ||||   || ||||||||||  |||  ||||    
T  5723444 aatcattgagtgtcttgttcattggt-gagattgagaaaagggtagaaattaggcttgttctttgtgaacttgtcaaagctaatttcttgtaaccttttt 5723346  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  5723345 gtatctctttgt-aagaactcattgat 5723320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11690480 - 11690593
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  11690480 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 11690578  T
Q  100 tgtatttctttgtaa 114  Q
    |||||  ||||||||    
T  11690579 tgtatccctttgtaa 11690593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 45099733 - 45099858
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag--tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  ||  ||||||||||| |||||||| |||| ||||   || ||||||||||  |||||||    
T  45099733 aatcattgagtgtcttgttcattggt-gagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactctt 45099831  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  45099832 ttgtatctctttg--aagaactcattgat 45099858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36205853 - 36205730
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa--tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  || |||||||||||| |||||||| |||| ||||   || ||||||||||  |||||||    
T  36205853 aatcattgagtgtcttgttcattggt-gagattgggaaaaatg-gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactctt 36205756  T
Q  99 ttgtatttctttgtaaagaactcattga 126  Q
    |||||| ||||||  |||||||||||||    
T  36205755 ttgtatctctttg--aagaactcattga 36205730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 17490331 - 17490138
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||| ||||||||||||||   || ||||| ||||| |||||||||    || ||||| ||||||||| |||| ||||||||||  |||||||||    
T  17490331 aatcattgaatgtcttgttcattgtt-gagattggaaaatg-gtagaaatt----ttattctttgtgagcttgttgaagctaatttcttgtaactctttt 17490238  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttcttgat 199  Q
    |||  ||||||| ||||||||||||||  || |||| | || || |||||||||| | || |||||| | ||||||| |||  |||||||||||||| ||    
T  17490237 gtaactctttgt-aagaactcattgatagtggattgtagagatcaatctctcccctagagtaggtcaat-ttggaccgaactgggtaaacatttcttaat 17490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 16676430 - 16676497
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    ||||||| |||| ||||||| ||||||||| |||||| ||||||||| ||| ||||||||||||||||    
T  16676430 tttatctagtttgttctttggttcgattgtggttttgatttacactttgttgctagattagatctaga 16676497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29867848 - 29867973
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||    
T  29867848 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatt 29867946  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| |||||||| |||||    
T  29867947 tgtatctctttgt-aagaactctttgat 29867973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11151780 - 11151667
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| ||||||||||||   || ||||||||| || ||||||||||| ||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  11151780 aatcattgagtctcttgttcattggt-gaaattgggaaaatgggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 11151682  T
Q  100 tgtatttctttgtaa 114  Q
    |||||  ||||||||    
T  11151681 tgtatcactttgtaa 11151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12123773 - 12123648
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||| ||||||||||||||||  | || ||||| ||||||||| |||||||  ||||||||  |||  ||| |||| || |||||||  |||||||||    
T  12123773 aatcatcgagtgtcttgttcatttga-gagattggaaaatgagtataaattagagttgttctttatgattttgttgaagcttatttcttgtaactctttt 12123675  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    ||||   ||||||||||||||| ||||    
T  12123674 gtatcattttgtaaagaactcaatgat 12123648  T

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Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 45726944 - 45727033
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||  |||||||| ||||||||| |||| ||||||||||  |||   ||||||| ||||||| ||||||||||||||    
T  45726944 aaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgat 45727033  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 6595153 - 6595070
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| |||||| || ||||||| |||||||| |||||    
T  6595153 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgt-aagaactcgttgat 6595070  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 32289584 - 32289668
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||||||||||||| |||||   ||||||||||||||    
T  32289584 gtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 32289668  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 42020020 - 42019881
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgt--aaagaactcattgatgatgaattgaata 140  Q
    |||||| ||| ||||||||||    ||||||  ||| ||||||||||  ||||||||||||| |||||||  ||| |||||||||||  ||||||  | |    
T  42020020 gtagaatttatgtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttgaga 42019921  T
Q  141 ggtcgatctc-tccccatagcaggtcattgttggaccaaa 179  Q
    | || ||||| ||||||||| |||| ||||||||||||||    
T  42019920 gatcaatctcttccccatagtaggttattgttggaccaaa 42019881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 11067284 - 11067437
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||| |||||||   || ||||| ||| || |||||||||||  |||| ||| |||||||||   || ||||||||||  ||| | ||    
T  11067284 aatcattgagtgtcttattcattggt-gaaattggaaaaatgggtagaaattagtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatt 11067382  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| ||||||||||| || ||| |||||| || || ||||||||||    
T  11067383 tgtatctctttgt-aagaactcatttataatggattgaagagatcaatctctcccc 11067437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 17450770 - 17450837
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattag 278  Q
    |||||| |||||||||||||| ||||| || |||||| |||||||| | ||||| |||||||||||||    
T  17450770 tactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttctagattag 17450837  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14634015 - 14633927
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    |||||||||||||||||||||||    || ||||| ||| || |||||||||||| |||||||| ||||||||| | || ||||||||||    
T  14634015 aatcattgagtgtcttgttcatttgt-gagattggtaaaatgggtagaaattaggattgttctttgtgagcttgtttaagctaatttctt 14633927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 26353204 - 26353288
Alignment:
Q  43 gtagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| ||||||||||| ||||| ||| |||| ||||||||||  ||| ||||||||| | ||||| ||| ||||||||||    
T  26353204 gtagaaattaaggtttgttctttgtgagtttgttgaagctaatttcttgtaacacttttgtatctttttgt-aagtactcattgat 26353288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34139960 - 34139872
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    |||||||||||||||||||||||    || |||| |||| || |||||||||||| |||||||| ||||||||| | || ||||||||||    
T  34139960 aatcattgagtgtcttgttcatttgt-gagattgagaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttctt 34139872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 4484478 - 4484394
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||||||| |||||   ||||||||||||||    
T  4484478 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaactcattgat 4484394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 7815395 - 7815340
Alignment:
Q  68 agcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcatt 124  Q
    |||||| |||| ||||||||||  ||||||||||||| ||||||| |||||||||||    
T  7815395 agcttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcatt 7815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 34811369 - 34811285
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| | ||| |||| | ||||||| |||| ||||||| ||  ||||||||| ||| |||||||||  |||||||||||    
T  34811369 gtagaaattaagattgctcttagagagcttgttgaagctaatttattgtaactcttttatatctctttgtaagaaactcattgat 34811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 42288078 - 42288003
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||| ||||||||||| ||| || |||||| ||||| || | |||||| |||||||||||||||||| |||||||||    
T  42288078 tttaacttgtttattccttggttggattgtggtttttctatgcacttgttttctagattagatctag-attgttgtt 42288003  T

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Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 283
Target Start/End: Original strand, 5043642 - 5043892
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||||||||||  |  ||||    
T  5043642 aaatgagtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtagattg 5043740  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| |||||| |||||||||||||||| |||  ||| ||||||||||| | |||    ||||  |||||||| |||||||||||||    
T  5043741 gagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgttta 5043840  T
Q  232 ttctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    ||  ||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  5043841 tttcttggttggattgtggttttgctatgcacttgattatagaataggtcta 5043892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 17763005 - 17763267
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| ||||||| | |||| || ||||||||||||  || ||||    
T  17763005 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctttttggaa-gaactcattgatagtggattg 17763103  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgct-----ttcttttactctttttatcttgttt 230  Q
     |  | || |||||||| ||| || || |||   ||||||| ||| |||| ||||||||||| | ||| |     |||||||||||| |||||||||||     
T  17763104 gagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaacatttcttggtgttgttatcttttcttttactctctttatcttgttc 17763203  T
Q  231 attctttgcttcgattgtagttttgctttacacttgtt-tctagattagatctagaattgttgtt 294  Q
    || ||||| || ||||||||||||||| | |||||||| |||||||||||||||| |||||||||    
T  17763204 atcctttggttagattgtagttttgctatgcacttgttatctagattagatctag-attgttgtt 17763267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 17758038 - 17758300
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  17758038 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 17758136  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----cttt-cttttactctttttatcttgttt 230  Q
     | || || ||||| || | | || || |||   ||||||| ||| |||| ||||||||||| | |||    |||| ||||||| || ||||||||||||    
T  17758137 gagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaacatttcttggtgttgttatctttccttttacgctctttatcttgttt 17758236  T
Q  231 attctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    || ||||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  17758237 atcctttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 17758300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28137597 - 28137472
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || | ||||||| || |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | ||    
T  28137597 aatcattgagtgtcttgttcattggt-gagaatgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 28137499  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||| ||||||||||||||    
T  28137498 tgtatttctttgt-aagaactcattgat 28137472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 2973092 - 2973003
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  2973092 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 2973003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 21588916 - 21589035
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  21588916 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 21589014  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  21589015 tctttgt-aagaactcattgat 21589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 21593649 - 21593768
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  21593649 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 21593747  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  21593748 tctttgt-aagaactcattgat 21593768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 26800629 - 26800863
Alignment:
Q  64 ggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagca 161  Q
    |||||||||| |||| ||||||||||  ||||  |||||||| ||||||||| ||||||||| ||  || |||| | || || |||||||| ||| || |    
T  26800629 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 26800726  T
Q  162 ggtcattgttggaccaaacaaggtaaacatttcttgatattgctttctttt----actctttttatcttgtttattctttgcttcgattgtagttttgct 257  Q
    ||||||||||||||| |||  | | ||||||||||| | ||| | ||||||    ||||||||||||||||||||  |||| || |||||| ||||||||    
T  26800727 ggtcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctctactctttttatcttgtttatcttttggttagattgtggttttgct 26800826  T
Q  258 ttacacttg-tttctagattagatctagaattgttgtt 294  Q
     | |||||| |||||||| ||||||||| |||||||||    
T  26800827 atgcacttgttttctagactagatctag-attgttgtt 26800863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5406388 - 5406264
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || |||||||||   |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||||    
T  5406388 aatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5406290  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  5406289 gtatctctttgt-aagaactcattgat 5406264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5410713 - 5410589
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || |||||||||   |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||||    
T  5410713 aatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 5410615  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  5410614 gtatctctttgt-aagaactcattgat 5410589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 3808856 - 3808772
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||  ||| | |||||||| ||||||| ||||||||||||||    
T  3808856 gtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgt-aagaactcattgat 3808772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 186735 - 186819
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||| |||||||||||||| ||||||| ||||  ||| || ||| | ||||||||||| ||||||||||||| ||||||||    
T  186735 gtagaaataaggtttgttcttggagagcttgttgaagttaaatttttatagctcttttgtatctctttgtaaagaattcattgat 186819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4045402 - 4045528
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||| |||| | || |||||||||   |||||||||||| |||||||||  |||||||| |||| ||||||||||  ||   |||    
T  4045402 aatcattgagtgtcttgtttattgga-gagattgggaaaatggtagaaattagggtttgttctttatgagcttgttgaagctaatttcttgtaatcattt 4045500  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    | ||| |||||||||| |||||||||||    
T  4045501 tatatctctttgtaaataactcattgat 4045528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9183220 - 9183095
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| ||||  ||| |||| ||||||||||  ||| | ||    
T  9183220 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatt 9183122  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  9183121 tgtatctctttgt-aagaactcattgat 9183095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 33211374 - 33211221
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||| ||||||||||   || ||||||||| |  |||||||||| | |||||||| ||||||||||||||  |||||||||  | ||| ||    
T  33211374 aatcattgagtgttttgttcattggt-gagattgggaaaattggtagaaattatggttgttctttgtgagcttgatgaagttaatttcttgtagctcatt 33211276  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| ||||||||||| || ||| |||| | || || ||||||||||    
T  33211275 tgtatctctttgt-aagaactcatttataatggattggagagatcaatctctcccc 33211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5413582 - 5413458
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || |||||||||   |||||||||||| |||||||| | || ||||   || ||||||||||  ||| |||||    
T  5413582 aatcattgagtgtcttgttcattg-gtgagattgggaaaaaggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaaccctttt 5413484  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  5413483 gtatctctttgt-aagaactcattgat 5413458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 12221262 - 12221176
Alignment:
Q  32 ttgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaa 118  Q
    |||||||||||||| ||||||||||||||||||  ||  | | |||||||||||| ||  |||||||||||||  ||||||||||||    
T  12221262 ttgggaaatgagtataaattaggtttgttcttgaagaattcgttgaaactaattttttgtaactcttttgtatcactttgtaaagaa 12221176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 26830307 - 26830187
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||| ||| || |||||||||||  |||||||| ||||||||| |||| ||||||||||  ||  | |||||||     
T  26830307 tgagtgtcttgttcattgggtgagattggaaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatc 26830208  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  26830207 tctttgt-aagaactcattgat 26830187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 31404863 - 31404739
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaa-gacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||  ||  || |||||||||   |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||    
T  31404863 aatcattgagtgtcttgttcat--cagtgagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt 31404766  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  31404765 tgtatctctttgt-aagaactcattgat 31404739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 33160542 - 33160390
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    |||||||||||||||| |||||||   || |||||||||  |  |||||||||||  |||||||| |||| ||||   || ||||||||||  |||||||    
T  33160542 aatcattgagtgtcttattcattggt-gagattgggaaaaaaaggtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaactctt 33160444  T
Q  99 ttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc 153  Q
    |||||| ||||||| ||||||||||||||| || |||| | || || ||||||||    
T  33160443 ttgtatctctttgt-aagaactcattgatggtggattggagagatcaatctctcc 33160390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25073547 - 25073673
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| |||||||||| | | || ||||  |||   ||||||||||| ||| ||||| ||||||||| | || ||| ||| ||  ||| |||||    
T  25073547 aatcattgagtatcttgttcatgggaggagattgaaaaaatggtagaaattagatttattcttcgtgagcttgttaaagctattttattgtaaccctttt 25073646  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||| ||||||||||||||||||    
T  25073647 gtatctctatgtaaagaactcattgat 25073673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 30834726 - 30834600
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag--tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  ||  ||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||    
T  30834726 aatcattgagtgtcttgttcattggt-gagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctt 30834628  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  30834627 ttgtatctctttg-gaagaactcattgat 30834600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 22424980 - 22424758
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc--ttttgtatttctttgtaaagaactcattgatgatgaat 134  Q
    ||||| |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| |  |||||||| ||||||| ||||||||||| ||  || ||    
T  22424980 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgt-aagaactcatt-atagtggat 22424883  T
Q  135 tgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttcttt----tactctttttatcttgtt 229  Q
    || | || || ||||||||  || || ||||||||||||||||  ||  ||| ||||||||||| | ||| | |||||    |||||| |||||||||||    
T  22424882 tggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttgtt 22424783  T
Q  230 tattctttgcttcgattgtagtttt 254  Q
    ||| ||| | || |||||| |||||    
T  22424782 tatccttaggttagattgtggtttt 22424758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 5740162 - 5740055
Alignment:
Q  26 aagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattg 125  Q
    |||| ||||| |||||  |||||| |||||||| | || | ||||||| |||||| ||||| ||  ||  ||||||||||||||||||||||||| | ||    
T  5740162 aagagattggaaaatggatagaaactaggtttgcttttagagagcttgttgaaaccaatttattgtaaaccttttgtatttctttgtaaagaacttactg 5740063  T
Q  126 atgatgaa 133  Q
    || |||||    
T  5740062 ataatgaa 5740055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 3808678 - 3808604
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctaga 285  Q
    |||||| |||||||||||||| ||||| || |||| | |||||||| | || ||| |||||||||||||||||||    
T  3808678 tactctctttatcttgtttatcctttggttagattatggttttgctatgcatttgttttctagattagatctaga 3808604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 2908503 - 2908563
Alignment:
Q  67 gagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||| ||||  |||||| ||| ||||||||||||| |  |||||||||||||||||||    
T  2908503 gagcttgttgaagataattttttacaactcttttgtatcttattgtaaagaactcattgat 2908563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 5739961 - 5739885
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||||| ||||| ||||| |||  |||| |||||||||||||||| ||| ||||||||||| ||||  |||||||    
T  5739961 tttatcttatttatgctttgattcagttgtggttttgctttacacttggttgctagattagatttagatatgttgtt 5739885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 35138895 - 35138769
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||| | |||| |||| |||||| |||||||||| |||||||||||||||| ||| ||||  |||||||||  |||||||||    
T  35138895 aatcattgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgtttgttcttggtgagtttgttgaagttaatttcttgcaactctttt 35138796  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||||||||||||||||||    
T  35138795 gtatctctttgtaaagaactcattgat 35138769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 283
Target Start/End: Original strand, 46860489 - 46860740
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| || |||||||||||  || ||||    
T  46860489 aaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aataactcattgatagtggattg 46860587  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||| ||| ||| || |||||||||||||||| ||   | | ||||||| ||| | |||    ||||  |||||||| |||||||||||||    
T  46860588 gagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaacattttttggtgttgttatcttttctttactctctttatcttgttta 46860687  T
Q  232 ttctttgcttcgattgtagttttgctttacactt-gtttctagattagatcta 283  Q
    | ||||| || |||||| |||||||| | ||||| |||| |||||||| ||||    
T  46860688 tcctttggttagattgtggttttgctatgcacttggtttatagattaggtcta 46860740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51398793 - 51398918
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||| | || ||||| ||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||||| ||    
T  51398793 aatcattgagtgtcttgttcattg-atgagattggaaaaatgggtagaaattagggttgttcttagtgaacttgttgaagctaatttcttgtaactcatt 51398891  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  51398892 tgtatctctttgt-aagaactcattgat 51398918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20937635 - 20937761
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| |||||||||| | |||| || || ||||  |||||||||| ||||||| |||| ||||||| ||||  |||||||||  ||| |||||    
T  20937635 aatcattgagtctcttgttcatagaaagagatcggaaaataggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaaccctttt 20937734  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| |||||| |||||||||||||||    
T  20937735 gtatctctttgaaaagaactcattgat 20937761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 39127526 - 39127702
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||| ||||| |||||   |||| |||| ||||| |||| |||||| |||||||||||||||||||| |||| ||||||||||| |  | ||||    
T  39127526 aatcattgagcgtcttattcatgagaagagattgagaaataagtataaattatgtttgttcttggtgagcttgttgaagctaatttcttatagttttttt 39127625  T
Q  101 gtatttctttgtaaagaactcattgat-gatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggac 175  Q
    |||| | || ||||| |||||||||||  ||| |||  | || || |||||||| ||| ||||||||||||||||||    
T  39127626 gtatcttttcgtaaataactcattgataaatggatttgaaagatcaatctctcctccagagcaggtcattgttggac 39127702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5236645 - 5236520
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  5236645 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 5236547  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  5236546 tgtatctctttgt-aagaactcattgat 5236520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 40734477 - 40734602
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  40734477 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaacctaatttcttgtaacacatt 40734575  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  40734576 tgtatccctttgt-aagaactcattgat 40734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 8166636 - 8166527
Alignment:
Q  10 gtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctt 109  Q
    ||||||||||||| | |||| ||||  ||||||||||||||||||||||||||||| ||| ||| ||||  |||| ||||| |||  |||||||| ||||    
T  8166636 gtgtcttgttcatgg-aagagattgataaatgagtagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgtatctctt 8166538  T
Q  110 tgtaaagaact 120  Q
    |||||||||||    
T  8166537 tgtaaagaact 8166527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 34491227 - 34491316
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||||||||||    
T  34491227 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgat 34491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 30236110 - 30236229
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    |||||||||||||||||| | || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  |||   |||||||     
T  30236110 tgagtgtcttgttcattg-atgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatc 30236208  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  30236209 tctttgt-aagaactcattgat 30236229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 5373210 - 5373336
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg--aaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactct 97  Q
    |||||||||||||||||||||||| |||| ||||||  ||| | |||||||||||| |||||||||  |||||||| |||| ||||||| ||  ||| ||    
T  5373210 aatcattgagtgtcttgttcattg-aagagattgggaaaaaagggtagaaattaggctttgttctttttgagcttgttgaagctaatttattgtaaccct 5373308  T
Q  98 tttgtatttctttgtaaagaactcattg 125  Q
    ||| ||| ||||||||| ||||||||||    
T  5373309 tttatatctctttgtaaggaactcattg 5373336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 7762286 - 7762369
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  7762286 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgat 7762369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7764446 - 7764568
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   |  |  |||||| | |||||||||||| |||||||| |||| |||| | || ||||||||||  |||||||||    
T  7764446 aatcattgagtgtcttgttcattg---gtgagagggaaaagggtagaaattagggttgttctttgtgaacttgttaaagctaatttcttgtaactctttt 7764542  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  7764543 gtatctctttgt-aagaactcattgat 7764568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22835191 - 22835066
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | ||    
T  22835191 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 22835093  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  22835092 tgtatccctttgt-aagaactcattgat 22835066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 43403928 - 43403640
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt-ttgtat 104  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| || |||||||  ||||| | || |||    
T  43403928 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggcttgttctttgtgagcttgttgaagctcatttcttgtaactcatgttttat 43403830  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatt-tcttgatatt 202  Q
     ||||||||| ||||||||||||  || |||| | || |  |||||||| ||| || ||||||| |||||||| |||  ||| |||| | ||||||| ||    
T  43403829 ctctttgtaa-gaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttgatgtt 43403731  T
Q  203 gct--ttctttt-----actctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctaga 285  Q
    | |  || ||||     ||||| |||||||||||||| ||||| || |||||| |||||||| | |||||| |||||||||||||||||||    
T  43403730 gttgtttatttttctccactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctaga 43403640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 5270566 - 5270640
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
    |||||| |||||| ||||||||||||| ||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  5270566 tactctctttatcatgtttattctttggttcgattgtggttttgcattacacttggttgctagattagatctaga 5270640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9581262 - 9581386
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||||    |  ||| ||||||| ||||||||||||||||||||| ||||||||| | || ||||||||||  ||| | |||    
T  9581262 aatcattgagtgtcttgttcatttgtggg-attcggaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccattt 9581360  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    ||||  |||||| ||||||||||||||    
T  9581361 gtatccctttgt-aagaactcattgat 9581386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 45095143 - 45095267
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || |||||||||   |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||||    
T  45095143 aatcattgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttt 45095241  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  45095242 gtatctctttgt-aagaactcattgat 45095267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 49228811 - 49228738
Alignment:
Q  220 ttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatctagaattgttgtt 294  Q
    ||||||||||||||||||  ||||| ||||||||| || |||||||||||||| |||||||||| ||||||||||    
T  49228811 ttatcttgtttattcttttgttcgaatgtagttttactatacacttgtttctaaattagatcta-aattgttgtt 49228738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29196576 - 29196450
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||| ||||||||||| |||||||||   || ||||||||||  ||| | |    
T  29196576 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccat 29196478  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||| ||||||||||||||    
T  29196477 ttgtatctctttgt-aagaactcattgat 29196450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44700667 - 44700513
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||| ||| |||| ||||||||||  |||   ||    
T  44700667 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaacctatt 44700569  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccca 156  Q
    ||||| ||||||| |||||||| |||||  || |||| | || || |||||||||||    
T  44700568 tgtatctctttgt-aagaactctttgatagtggattggagagatcaatctctcccca 44700513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 760826 - 760951
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||| ||||||| ||||||||| | || ||||||||||  ||| | ||    
T  760826 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatt 760924  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  760925 tgtatccctttgt-aagaactcattgat 760951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4569931 - 4570056
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||| |||||| |||   || ||||||||| || |||||||||||| |||||| | ||||||||  |||| ||||||||||  ||||| ||    
T  4569931 aatcattgagtgttttgttctttggt-gagattgggaaaatgggtagaaattagggttgttcattgtgagcttattgaagctaatttcttgtaactcatt 4570029  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  4570030 tgtatctctttgt-aagaactcattgat 4570056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 20937851 - 20937934
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||||| ||||||||||||||| |||| |||||||||  |||| ||||||||||| ||  ||||||||||||||| ||||||||    
T  20937851 tactctctttatcttgtttattatttggttcgattgtgattttactttacacttgattaatagattagatctagatttgttgtt 20937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 25491114 - 25491031
Alignment:
Q  44 tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||||||||||| | ||||||| |||| || |||||||| |   ||||||||| ||||||||||||| ||||||||    
T  25491114 tagaaattaggtttgttctttgagagcttgttgaagctgatttcttatactccttttgtatctctttgtaaagaaatcattgat 25491031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39153550 - 39153425
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||| |   || ||||||||| || ||||||||||||||||||| | ||||||||| | || ||||||||||  ||||| ||    
T  39153550 aatcattgagtgtcttgttcat-gtgtgagattgggaaaatgggtagaaattaggtttgttcattgtgagcttgtttaagctaatttcttgtaactcatt 39153452  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||| | ||||||||||||||    
T  39153451 tgtatccctttat-aagaactcattgat 39153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 40735362 - 40735487
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| ||||||||| |||| ||||||| ||  |||   ||    
T  40735362 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttattgtaaccagtt 40735460  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  40735461 tgtatctctttgt-aagaactcattgat 40735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 49199439 - 49199357
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||||| |||||||||||||| ||||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  49199439 tactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 49199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 53921692 - 53921567
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||||||||| || ||||||||| | || ||||||||||  ||||| ||    
T  53921692 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattaggtttgttgtttgtgagcttgttaaagctaatttcttgtaactcatt 53921594  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||   ||||| ||||||||||||||    
T  53921593 tgtatcattttgt-aagaactcattgat 53921567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 285
Target Start/End: Original strand, 36018867 - 36019116
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaatt 135  Q
    ||||| || ||||||||| |||||||| ||||||||| ||||  |||||||||  ||||| |||||||| ||||||||| ||||||||| ||  || |||    
T  36018867 aaatgggttgaaattagggttgttctttgtgagcttgttgaagttaatttcttgtaactcattttgtatctctttgtaa-gaactcatt-atagtggatt 36018964  T
Q  136 gaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttctttt----actctttttatcttgttta 231  Q
    | | ||||| ||||||||||  || | ||  |||||||||| |||  | | ||||||| ||| | ||| | ||||||    ||||| |||||||||||||    
T  36018965 ggagaggtcaatctctccccc-agtatgt--ttgttggaccgaactggatgaacattttttggtgttgttatcttttttctactctctttatcttgttta 36019061  T
Q  232 ttctttgcttcgattgtagttttgctttacacttg-tttctagattagatctaga 285  Q
    | ||||| || |||||| |||||| |  ||||||| |||||||||||||||||||    
T  36019062 tcctttggttagattgtggttttgttaaacacttgttttctagattagatctaga 36019116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 43401985 - 43401865
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||| |||    
T  43401985 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttat 43401887  T
Q  105 ttctttgtaaagaactcattgat 127  Q
     ||||||| ||||||||||||||    
T  43401886 ctctttgt-aagaactcattgat 43401865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 285
Target Start/End: Complemental strand, 55302064 - 55301871
Alignment:
Q  98 tttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttctt 196  Q
    ||||||| ||||||||| ||| ||||||||  || |||| | || || |||||||| |||||| |||||||||||||||| |||  ||| ||||||||||    
T  55302064 tttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacatttctt 55301966  T
Q  197 gatattgctttctttt----actctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg--tttctagattagatctaga 285  Q
      | ||| | ||||||    ||||| |||||||||||||| ||||| ||  ||||| | |||||| | ||||||  |||||||||||||||||||    
T  55301965 agtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcacttggttttctagattagatctaga 55301871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 2020187 - 2020244
Alignment:
Q  70 cttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||| |||| ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  2020187 cttgttgaagctaatttcttataaccgttttgtatttctttgtaaagaactcattgat 2020244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 26323262 - 26323137
Alignment:
Q  2 atcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttg 101  Q
    |||||| |||||||||||||| | | || |||| |||| | ||| |||||||||||||| |||  ||| ||| |||| ||||||||||  |||  |||||    
T  26323262 atcattaagtgtcttgttcatgggatgagattgagaaaagggtaaaaattaggtttgtttttgaagagtttgttgaagctaatttcttgtaacctttttg 26323163  T
Q  102 tatttctttgtaaagaactcattgat 127  Q
    ||| |||| ||||| |||||||||||    
T  26323162 tatatcttggtaaaaaactcattgat 26323137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 37408441 - 37408588
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||   || |||||||||  | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||||||    
T  37408441 attgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgta 37408539  T
Q  104 tttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc 153  Q
    | ||||||| ||||||||||||||  || |||||| || || ||||||||    
T  37408540 tctctttgt-aagaactcattgatagtggattgaagagatcaatctctcc 37408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 54593689 - 54593808
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || |||||| ||||| | |||||||||| |||||||| ||||||||| |||| ||||||| ||  ||| | |||||||     
T  54593689 tgagtgtcttgttcattg-gtgagattgggaaaatgtgcagaaattagggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatc 54593787  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  54593788 tctttgt-aagaactcattgat 54593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 54739101 - 54739017
Alignment:
Q  43 gtagaaattag-gtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||  |  ||||||||| ||| ||| ||||||||||||||||||    
T  54739101 gtagaaattagtgtttgttctttgtgagcttgttgaaactaattt-atgtaactcttttatatctctctgtaaagaactcattgat 54739017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5434067 - 5433947
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggga---aatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactc 96  Q
    ||||||||||||||||||||||||   || |||||||   |||| |||||||||||| ||||||||| ||||||||| | || ||||||||||  ||| |    
T  5434067 aatcattgagtgtcttgttcattggt-gagattgggagaaaatg-gtagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaaccc 5433970  T
Q  97 ttttgtatttctttgtaaagaac 119  Q
    |||| ||| ||||||||||||||    
T  5433969 ttttatatctctttgtaaagaac 5433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 265
Target Start/End: Complemental strand, 6095752 - 6095521
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    |||||||||||||||||| |||||||| || | |||  ||||  |||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  6095752 aaatgagtagaaattagggttgttctttgtaaacttcttgaagttaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 6095654  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| ||| || ||||||  |||||||| |||   || ||||||||||| | |||    ||||  |||||||| |||||||||||||    
T  6095653 gagagatcaatctctcctccagagtaggtca-agttggaccgaactgtgtgaacatttcttggtgttgttatcttttctttactctctttatcttgttta 6095555  T
Q  232 ttctttgcttcgattgtagttttgctttacactt 265  Q
    | | ||| || |||||| |||||||| |||||||    
T  6095554 tgccttggttggattgtggttttgctatacactt 6095521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 46173378 - 46173461
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||| ||||||||    
T  46173378 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaattcattgat 46173461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 4055941 - 4055827
Alignment:
Q  13 tcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt-aaaactcttttgtatttctttg 111  Q
    |||||||||| | |||| ||||||||||| |||||||||||| |||||||||| || ||||   ||  |||||||||  || ||||||||||| ||||||    
T  4055941 tcttgttcatgggaagagattgggaaatgggtagaaattagg-ttgttcttggagaacttgtaaaagttaatttcttgtaacctcttttgtatctctttg 4055843  T
Q  112 taaagaactcattgat 127  Q
    |||  |||||||||||    
T  4055842 taagaaactcattgat 4055827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19684078 - 19683953
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||| |||||||||||||    || ||||||||| || |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||    
T  19684078 aatcattgaatgtcttgttcatttgt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt 19683980  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  19683979 tgtatctctttgt-aagaactcattgat 19683953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 43401771 - 43401689
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||||| |||||||||||||| ||||| || ||||||  ||||||| | |||||| |||||||||||||||||| |||||||||    
T  43401771 tactctctttatcttgtttatcctttggttagattgtgattttgctatgcacttgttttctagattagatctag-attgttgtt 43401689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 44331524 - 44331649
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||| ||||| || |||||||||||| |||||| | ||||||||| |||| ||||||||||  ||  | ||    
T  44331524 aatcattgagtgtcttgttcattggt-gagattaggaaaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaagccatt 44331622  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||| ||||||    
T  44331623 tgtatctctttgt-aagaacttattgat 44331649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5258334 - 5258208
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag--tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  ||  ||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||    
T  5258334 aatcattgagtgtcttgttcattggt-gagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctt 5258236  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  5258235 ttgtatctctttg-gaagaactcattgat 5258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9636316 - 9636190
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggga--aatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||| ||||||   || |||||||  || | |||||||||||| |||||||| |||| ||||   |||||||||||||  ||| |||    
T  9636316 aatcattgagtgtcttggtcattggt-gagattgggagaaaagggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaaccctt 9636218  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| | ||||| ||||||||||||||    
T  9636217 ttgtatctttttgt-aagaactcattgat 9636190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26386670 - 26386598
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttg 73  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||||||||||| |||||||||    
T  26386670 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttg 26386598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 1313940 - 1313868
Alignment:
Q  55 tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||| ||||||| | || ||||||||||  ||  ||||||||| |||||| |||||||||||||||    
T  1313940 tttgttcttggagagcttgttaaagctaatttcttgcaagccttttgtatatctttgaaaagaactcattgat 1313868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 29810889 - 29810972
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||  |||||||| |||| |||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  29810889 gtagaaattagagttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 29810972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 1683667 - 1683742
Alignment:
Q  212 tactctttttatcttgtttattcttt-gcttcgattgtagttttgctttacacttg-tttctagattagatctaga 285  Q
    |||||| ||||||||||||||| ||| | ||||||||| |||||  |||||||| | |||||||||||||||||||    
T  1683667 tactctctttatcttgtttatttttttggttcgattgtggttttattttacactaggtttctagattagatctaga 1683742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 33191914 - 33192001
Alignment:
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacattt 193  Q
    ||||||||||||||||||||||  || |||  | || || ||||||| ||| || ||||||||||||||| ||||  |||||||||||    
T  33191914 tctttgtaaagaactcattgatagtggattagagagatcaatctctctccagaggaggtcattgttggacaaaacttggtaaacattt 33192001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 3148155 - 3148054
Alignment:
Q  26 aagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattg 125  Q
    |||| |||| ||||||  |||||||||||||| ||||||  ||||||| |||| ||||||||||  |||  | |||||||| |||||||  | |||||||    
T  3148155 aagagattgagaaatggatagaaattaggtttcttcttgaagagcttgttgaagctaatttcttgtaaccttattgtatttgtttgtaagaatctcattg 3148056  T
Q  126 at 127  Q
    ||    
T  3148055 at 3148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5260513 - 5260387
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag--tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||| ||||||   || |||||||||  ||  ||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||    
T  5260513 aatcattgagtgtcttggtcattggt-gagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctt 5260415  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  5260414 ttgtatctctttg-gaagaactcattgat 5260387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 29813084 - 29813164
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcatt 124  Q
    |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | |||| || ||||||| |||||||||||    
T  29813084 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctctttgt-aagaactcatt 29813164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 23392062 - 23392026
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttg 73  Q
    |||||||||||||||| |||||||||| |||||||||    
T  23392062 aaatgagtagaaattaagtttgttctttgtgagcttg 23392026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 24635278 - 24635362
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| |||||||||||| ||| ||| |||| ||||||| ||  |||| |||||||| ||||| |||  || ||||||||    
T  24635278 gtagaaattaagtttgttcttggagagtttgttgaagctaattttttgtaactattttgtatctctttataatcaattcattgat 24635362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 35138669 - 35138625
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacac 263  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||||    
T  35138669 tttatctggtttattctttggttcgattgtggttttgttttacac 35138625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 294
Target Start/End: Complemental strand, 8359500 - 8359208
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| || ||||| ||||||||| | |||||||||||||  ||| | ||||||||    
T  8359500 tgagtgtcttgttcattggg-gagattgggaaaatgggtagaaattagggtttttctttgtgagcttgtttaaactaatttcttgtaacccattttgtat 8359402  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg 203  Q
     ||||||| ||||||||||||||  || |||| | || || |||||||| ||| || |||||||||||||||| |||  ||| ||||||||||| | |||    
T  8359401 ctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgttg 8359303  T
Q  204 ctttcttt----tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
     | |||||    ||||||  ||||||||||||| ||||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  8359302 ttatcttttctctactctcattatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 8359208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 285
Target Start/End: Complemental strand, 22328538 - 22328290
Alignment:
Q  44 tagaaattag-gtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    |||||||||| |||||||||| ||||||||| |||| ||||||||||  ||||||||||||| |||||| || ||| ||||| ||  || |||  | ||     
T  22328538 tagaaattagagtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagaga 22328439  T
Q  143 tcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttcttt----tactctttttatcttgtttattcttt 237  Q
    || |||||||||| | || |||||||||||||||| |||  |||||| |||| ||| | ||| | |||||    |||||| |||||||||||||||||||    
T  22328438 tcaatctctcccctagagtaggtcattgttggaccgaactgggtaaatattttttggtgttgttatcttttctctactctctttatcttgtttattcttt 22328339  T
Q  238 gcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
      ||||||||| |||||| | | ||||| |||||| |||||||||||||    
T  22328338 tgttcgattgtggttttgttatgcacttggtttctcgattagatctaga 22328290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 283
Target Start/End: Complemental strand, 48599487 - 48599238
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||  |||| |||||||||  || ||||    
T  48599487 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg-gaagagctcattgatagtggattg 48599389  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | || || |||||||| ||| ||||| |||  |||||||| |||  ||| ||||||||||||| |||    ||||  |||||||| |||||||||||||    
T  48599388 gagagatcaatctctcctccagagcagatca-agttggaccgaactgggtgaacatttcttgatgttgttatcttttctttactctctttatcttgttta 48599290  T
Q  232 ttctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    ||| ||| || ||||||||||||||| | |||||| || |||| ||| ||||    
T  48599289 ttccttggttggattgtagttttgctgtgcacttgattatagactaggtcta 48599238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 5116583 - 5116758
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| ||||||| || | | || ||| ||||| |||||||||||||||||||||||||  || ||| ||||  |||||| ||  ||  |||||    
T  5116583 aatcattgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggtttgttcttggatagtttgttgaagataatttattgtaaacctttt 5116682  T
Q  101 gtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctct-ccccatagcaggtcattgttggac 175  Q
    |||| ||||||||||||||||||||||  ||||||| | || |  |||||| ||||||||||  ||||||||||||    
T  5116683 gtatctctttgtaaagaactcattgatagtgaattggagagataaatctctcccccatagcaaatcattgttggac 5116758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 2361155 - 2361036
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| |||||||     
T  2361155 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatc 2361057  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  2361056 tctttgt-aagaactcattgat 2361036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 23565209 - 23565125
Alignment:
Q  43 gtagaaattaggt-ttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  23565209 gtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgat 23565125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27347796 - 27347921
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  27347796 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatt 27347894  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  27347895 tgtatctctttgt-aagaactcattgat 27347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 43363621 - 43363535
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttc--tttgtaaagaactcattgat 127  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||  ||||||||||||| ||  |||||||| |||||||||||    
T  43363621 gtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgat 43363535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 48491558 - 48491683
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  48491558 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 48491656  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||| |||||||||||||||    
T  48491657 tgtatctctttg-aaagaactcattgat 48491683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4253718 - 4253522
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| ||||||||||||   || ||||| |||   |||||||||||| ||||||||| ||||||||| |||| |||||||| |  ||| ||||    
T  4253718 aatcattgagtttcttgttcattggt-gaaattggtaaaatggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttt 4253620  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccc-catagcaggtcattgttggaccaaacaaggtaaacatttcttg 197  Q
    | ||| |||||| ||||||||||||||| ||| |||  | || || ||||||||| || || |||||| | ||||||| ||| ||||||||||||||||    
T  4253619 tatatctctttggaaagaactcattgataatggattagagagatcaatctctcccacagagtaggtcaat-ttggaccgaactaggtaaacatttcttg 4253522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 29608752 - 29608841
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||||| ||||||| ||||||| ||||||||||||||    
T  29608752 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgat 29608841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 47674132 - 47673976
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  47674132 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 47674034  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccata 158  Q
    ||||| ||||||| ||||||||||||||  || |||| | || || |||||||||||||    
T  47674033 tgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctccccata 47673976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 1360140 - 1360064
Alignment:
Q  219 tttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  1360140 tttatcttgtttcttcttttgttcgattgtggttttgctttacacttagtttttagattagatctaaaattgttgtt 1360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26417295 - 26417449
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| ||||  |||||||||  ||| | ||    
T  26417295 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatt 26417393  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccca 156  Q
    ||||| ||||||| |||||||| |||||  || |||| | || || |||||||||||    
T  26417394 tgtatctctttgt-aagaactcgttgatagtggattggagagatcaatctctcccca 26417449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 1113679 - 1113761
Alignment:
Q  44 tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||| |||||||| ||||||||| |||| ||||||||||| ||| | ||||||| ||||||| ||||||||||||||    
T  1113679 tagaaattagggttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctctttgt-aagaactcattgat 1113761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8153321 - 8153446
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| ||||||||||||||| |||||||| ||||| |||   || ||||||||||  ||||| ||    
T  8153321 aatcattgagtgtcttgttcattggt-gagattgggaaaatgagtagaaattagggttgttctttgtgagattgtcaaagctaatttcttgtaactcatt 8153419  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| || |||||||||||    
T  8153420 tgtatctctttgt-aataactcattgat 8153446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 31733158 - 31733033
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || | || |||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  31733158 aatcattgagtgtcttgttcattggt-gagactgagaaaatgggtagaaattagggttgttctttgtgagcttggtgaagctaatttcttgtaacccatt 31733060  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  31733059 tgtatctctttgt-aagaactcattgat 31733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 8452175 - 8452094
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgtt 291  Q
    |||||||||||||||||||  |||||||| ||||||||| ||||||||||||| ||| ||| ||||||||||||||| |||||    
T  8452175 tttactctttttatcttgtc-attctttggttcgattgtggttttgctttacatttgatttttagattagatctagatttgtt 8452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 31518774 - 31518898
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag-tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||| |||||||||||||||||   || |||||||||  || |||||||||||||||||||| ||||||||  |||| ||| ||||||  ||||| ||    
T  31518774 aatcatcgagtgtcttgttcattggt-gagattgggaaaataggtagaaattaggtttgttctttgtgagcttattgaagctagtttcttgtaactcatt 31518872  T
Q  100 tgtatttctttgtaaagaactcattga 126  Q
    ||||| ||||||| |||||||||||||    
T  31518873 tgtatctctttgt-aagaactcattga 31518898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 3258980 - 3259270
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || |||||| ||||| ||||||| |||| |||||||| ||||||||| | || ||||||| ||  ||||| |||||||     
T  3258980 tgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaactagggttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatc 3259078  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    |||||||||| ||| |||||||  || |||| | || || |||||||| ||| || ||||||  |||| ||| |||  ||| |||||||| || | |||     
T  3259079 tctttgtaaa-aacccattgatagtggattggagagatcaatctctcctccagagtaggtca-agttgaaccgaactgggtgaacatttcctggtgttgt 3259176  T
Q  204 ---ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
       ||||  |||||||| |||||||||||||||| ||| || |||||| |||||||| | | | || |||||||||||||||||| |||||||||    
T  3259177 tatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcccgtgttttctagattagatctag-attgttgtt 3259270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 4508859 - 4508771
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattga 126  Q
    |||||||||||||||||| |||||||| ||||||||  |||| ||||||||||  ||| | ||||||| ||||||| |||||||||||||    
T  4508859 aaatgagtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattga 4508771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 22269958 - 22270077
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  22269958 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 22270056  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||| ||||||    
T  22270057 tctttgt-aagaactgattgat 22270077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23555018 - 23555144
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  |  |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| |||    
T  23555018 aatcattgagtgtcttgttcattggt-gagattgggaaaaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacactt 23555116  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||  ||||||| ||||||||||||||    
T  23555117 ttgtacctctttgt-aagaactcattgat 23555144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 4178753 - 4178917
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag-tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  || ||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||    
T  4178753 aatcattgagtgtcttgttcattggt-gagattgggaaaaaaggtagaaattagggttgttctttgtgaacttgggaaagctaatttcttgtaacccttt 4178851  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtca 166  Q
    ||||| ||||||  ||||||||||||||  || |||||| || || |||||||| ||| |||||||||    
T  4178852 tgtatctctttg--aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31105582 - 31105456
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||| ||| ||||| ||||||||| |||| ||||||||||  ||| | ||    
T  31105582 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattagattttttctttgtgagcttgttgaagctaatttcttgtaacccatt 31105484  T
Q  100 tgtatttctttgtaaagaactcattgatg 128  Q
    ||||| | ||||| |||||||||||||||    
T  31105483 tgtatctttttgt-aagaactcattgatg 31105456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3904807 - 3904680
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| |||||||| | | |||| |||||||||   ||||||||||||||| |||||| | |||| |  ||||  |||||||||  ||| ||||    
T  3904807 aatcattgagtctcttgttcttaggaagagattgggaaaatggtagaaattaggttttgttctttgagagcctattgaatgtaatttcttgtaacacttt 3904708  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    || || ||||||||||||||||||||||    
T  3904707 tgcatctctttgtaaagaactcattgat 3904680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4586140 - 4586265
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||| ||  ||| | ||    
T  4586140 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatt 4586238  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    | ||| ||||||| ||||||||||||||    
T  4586239 tttatctctttgt-aagaactcattgat 4586265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 30024921 - 30024796
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||| | ||||||||| |||| ||||||||||  ||| | ||    
T  30024921 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatt 30024823  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| |||||||| |||||    
T  30024822 tgtatctctttgt-aagaactctttgat 30024796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35853893 - 35854018
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||    
T  35853893 aatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt 35853991  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  35853992 tgtatctctttgt-aagaactcattgat 35854018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 6431986 - 6432075
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| |||||||| |||||    
T  6431986 aaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgat 6432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 2390297 - 2390374
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaa 114  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| |||||||||    
T  2390297 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa 2390374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 36574664 - 36574579
Alignment:
Q  43 gtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| | ||||||||| ||||| ||| |||| ||||||||||  ||| ||||| ||| ||||||||||||||||||||||    
T  36574664 gtagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgat 36574579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14070022 - 14069868
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||    
T  14070022 aatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatt 14069924  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccca 156  Q
    ||||| ||||||| ||||||||||||||  || |||| | || || |||||||||||    
T  14069923 tgtatctctttgt-aagaactcattgatagtggattggagagatcaatctctcccca 14069868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 36146597 - 36146472
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattag-gtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||| ||||| ||||||||||| ||||||| || ||||||||| |||| |||||||| |  ||| | |    
T  36146597 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattagagtttgttatttgtgagcttgttgaagctaatttc-tgtaacccat 36146500  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||| ||||||||||||||    
T  36146499 ttgtatctctttgt-aagaactcattgat 36146472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 2390479 - 2390561
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||||| |||||||||||||| ||||  || |||||| |||||||| |||| ||| |||||||||||||||||| |||||||||    
T  2390479 tactctctttatcttgtttatccttttgttggattgtggttttgctatacatttgttttctagattagatctag-attgttgtt 2390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14380050 - 14379925
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaat-gagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| | ||    
T  14380050 aatcattgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatt 14379952  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  14379951 tgtatctctttgt-aagaactcattgat 14379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18126623 - 18126748
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||| ||||||||||   || ||||| ||| || |||||||||||| |||||||| |||| |||| | || ||||||||||  ||| | ||    
T  18126623 aatcattgagtgttttgttcattggt-gagattggaaaaatgtgtagaaattagggttgttctttgtgaacttgttcaagctaatttcttgtaacccatt 18126721  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  18126722 tgtatctctttgt-aagaactcattgat 18126748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38671411 - 38671286
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || |||||||||||| |||||||| ||||||||| | || ||||||| ||  ||| | ||    
T  38671411 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacacatt 38671313  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  38671312 tgtatcactttgt-aagaactcattgat 38671286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43864223 - 43864337
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||| |||||||| |||| |||| |||| |||||||| |  ||| | ||    
T  43864223 aatcattgagtgtcttgttcattggt-gagattggaaaagtgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatt 43864321  T
Q  100 tgtatttctttgtaaa 115  Q
    ||||| ||||||||||    
T  43864322 tgtatctctttgtaaa 43864337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 496136 - 496047
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| | |||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||| | ||||||||||||||    
T  496136 aaatgggtagaaattagggtagttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctctttat-aagaactcattgat 496047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 34310899 - 34310780
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||  ||| |||| ||||||||||  ||| | |||||||     
T  34310899 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgtaacacatttgtatc 34310801  T
Q  106 tctttgtaaagaactcattgat 127  Q
    | ||||| ||||||||||||||    
T  34310800 tttttgt-aagaactcattgat 34310780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 19502200 - 19502282
Alignment:
Q  44 tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||| | ||||| || |||||||||   || ||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  19502200 tagaaattaaggttgttttttgtgagcttgtcaaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgat 19502282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47676325 - 47676200
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||| ||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| ||||  ||| |||| ||||||||||  ||| | ||    
T  47676325 aatcaatgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatt 47676227  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||| ||||    
T  47676226 tgtatctctttgt-aagaactcaatgat 47676200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1360342 - 1360221
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttct--taaaactctt 98  Q
    ||||||||||| |||||||||| | | || |||||||||   |||||||||||||||  |||||| || |||| |||| | |||||||  |||  || ||    
T  1360342 aatcattgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttgtcttggagaacttgttgaagcgaatttcttgtaaccctttt 1360243  T
Q  99 ttgtatttctttgtaaagaact 120  Q
    |||||| ||||||||| |||||    
T  1360242 ttgtatctctttgtaaggaact 1360221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24526086 - 24526013
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattagg-tttgttcttggtgagcttg 73  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||||| ||||||||| |||||||||    
T  24526086 aatcattgagtgtcttgttcattg-gtgaaattgggaaaatgggtagaaattaggttttgttctttgtgagcttg 24526013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29991033 - 29991157
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || ||||||||| |  ||||||||||| ||||| || |||| ||||   || ||||||||||  ||| |||||    
T  29991033 aatcattgagtgtcttgttcattg-gtgagattgggaaaaggatagaaattagggttgttatttgtgaacttgtcaaagctaatttcttgtaaccctttt 29991131  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||| | || |||||||||||    
T  29991132 gtatctctttct-aataactcattgat 29991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 6360080 - 6360016
Alignment:
Q  62 ttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  6360080 ttggtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 6360016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 27073875 - 27073920
Alignment:
Q  81 taatttcttaaaactcttttgtatttctttgtaaagaactcattga 126  Q
    |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  27073875 taatttcttgtaactcttttgtatctctttgtaaagaactcgttga 27073920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 27204438 - 27204393
Alignment:
Q  81 taatttcttaaaactcttttgtatttctttgtaaagaactcattga 126  Q
    |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  27204438 taatttcttgtaactcttttgtatctctttgtaaagaactcgttga 27204393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 43504315 - 43504178
Alignment:
Q  31 attgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatga 129  Q
    ||||||||| | |||||||||||| |||||| | |||| ||||   || ||||||||||  ||||| |||||||| |||||   ||||||||||||||      
T  43504315 attgggaaaagggtagaaattagggttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatag 43504216  T
Q  130 tgaattgaataggtcgatctctcc-ccatagcaggtca 166  Q
    ||||||| | || || |||||||| |||||| ||||||    
T  43504215 tgaattggagagttcaatctctcctccatagtaggtca 43504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 29608930 - 29609013
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtag-ttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||| |||||||||||||| |||||||| |||||| | ||||| | | ||||| ||||||| ||||||||||| |||||||||    
T  29608930 tactctctttatcttgtttatcctttgcttagattgtggtttttgatatgcacttggtttctatattagatctag-attgttgtt 29609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 39731389 - 39731473
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||    | ||||||||||  ||||||||||||| |||||   ||||||||||||||    
T  39731389 gtagaaattagggttgttctttgtgaacttgtcagatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 39731473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 41649157 - 41649075
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||||||||||| ||||||||| |  | ||||||||||  ||| | |||||||  |||||| ||||||||||||||    
T  41649157 gtagaaattaggtttgttctttgtgagcttg-tttagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgat 41649075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 266
Target Start/End: Complemental strand, 47255493 - 47255257
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  47255493 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 47255395  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg-------ctttcttttactctttttatcttgt 228  Q
     | || || |||||||| ||| || |||||||||||||||| |||  ||| ||||||||||| | |||        ||||||||||||| ||||||||||    
T  47255394 gagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgttgttattttttttcttttactctctttatcttgt 47255295  T
Q  229 ttattctttgcttcgattgtagttttgctttacacttg 266  Q
    |||| ||||| || |||||| |||||||| | ||||||    
T  47255294 ttatcctttggttagattgtggttttgctatgcacttg 47255257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 47115156 - 47115448
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| |  |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | ||||||||    
T  47115156 tgagtgtcttgttcattggt-gagattgggaaaattggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtat 47115254  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg 203  Q
     |||||||||| ||| |||||||  || |||| | || || |||||| | ||| || |||||||||||||||| |||  ||| ||||||||||||| |||    
T  47115255 ctctttgtaaa-aacccattgatagtggattggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaacatttcttgatgttg 47115353  T
Q  204 ctttctttta----ctctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
     | ||||||     ||||||||||||||||||| ||||  || |||||| |||||| | | |||||| |||||||||||||||||| |||||||||    
T  47115354 ttatcttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttatgcacttgttttctagattagatctag-attgttgtt 47115448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 294
Target Start/End: Original strand, 6808479 - 6808729
Alignment:
Q  49 attaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatc 148  Q
    ||||||||||||||||| ||||||| |||| |||| |||||  ||||||||||||| ||||||||||||||||||| ||  || |||| | || || |||    
T  6808479 attaggtttgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatc 6808578  T
Q  149 tc-tccccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg--ctttcttt--tactctttttatcttgtttattctttgcttcg 243  Q
    || ||| || || |||| |||||||| || ||| || |||| ||||||||   |||  |||| |||  |||||| |||||||||||||| ||||  || |    
T  6808579 tcttcctcagagtaggttattgttggtccgaactagataaatatttcttggagttgttctttgttttctactctctttatcttgtttatgctttagtttg 6808678  T
Q  244 attgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    || ||  ||||||||||||||| |||||||||| |||||||| |||||||||    
T  6808679 atagtgattttgctttacacttggtttctagatcagatctag-attgttgtt 6808729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 22079307 - 22079580
Alignment:
Q  13 tcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgt 112  Q
    |||||||||| | |||| ||||| |||   |||||||||| |||||||||| ||||||||| | || ||||||||||  |||  |||||||| |||||||    
T  22079307 tcttgttcatgggaagagattggaaaaatggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgt 22079406  T
Q  113 aaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttc-ttgatattgctttctt 210  Q
    |||||||||||||||  || |||| | || || || ||||| ||| || ||||||||| ||||||||||  |||||||||||| ||| | |||  |||||    
T  22079407 aaagaactcattgatattggattggagagatcaatttctcctccaaagtaggtcattgctggaccaaacttggtaaacatttctttggtgttg--ttctt 22079504  T
Q  211 ttactct-ttttatcttgtttattctttgcttcgattgtagttttgctttacacttgttt-ctagattagatctaga 285  Q
    || ||||  ||||| ||  || ||||||| ||| ||||| ||||||||||||||||||||  | |||||||||||||    
T  22079505 ttcctctactttatgtt-attgttctttgattcaattgttgttttgctttacacttgtttgtttgattagatctaga 22079580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 23555418 - 23555290
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| |||| |||| |||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||  || ||||    
T  23555418 aaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttataactcatttgtatctctttgt-aagaactcattgatagtggattg 23555320  T
Q  137 aataggtcgatctctccccatagcaggtca 166  Q
     | || || |||||||||||||| ||||||    
T  23555319 gagagttcaatctctccccatagtaggtca 23555290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 29136232 - 29136495
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||||    
T  29136232 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatt 29136330  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| ||| || ||||||   ||||||| ||| |||| ||||||||||| |  ||     
T  29136331 tctttgt-aagaactcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacatttcttggtgctgt 29136429  T
Q  204 ctttcttt---tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg 266  Q
    || | |||   |||||| |||||||||||||| ||||| || |||||| |||||||| | ||||||    
T  29136430 ctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttg 29136495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 13547272 - 13547020
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||| ||||||  ||| | |||||||     
T  13547272 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatc 13547174  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| ||| || ||||||  |||||||| |||  ||| ||||||||||| | |||     
T  13547173 tctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttgt 13547076  T
Q  204 ---ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgc 256  Q
       ||||  |||||||| |||||||||||||||||||| || |||||| |||||||    
T  13547075 tatcttttctttactctctttatcttgtttattctttggttggattgtggttttgc 13547020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 283
Target Start/End: Complemental strand, 7482384 - 7482134
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaatt 135  Q
    ||||| |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | |||||||| ||||||| ||||||||||||||  ||||||    
T  7482384 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtgaatt 7482286  T
Q  136 gaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttt 230  Q
    | | || || ||||||||  || || ||||||  |||||||| ||| |||| |||||||| || |||||    ||||  |||||||| ||||||||||||    
T  7482285 ggagagatcaatctctccttcagagtaggtca-agttggaccgaactaggtgaacatttcatggtattgtcatcttttctttactctctttatcttgttt 7482187  T
Q  231 attctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    |||| ||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  7482186 attccttggttggattgtggttttgctatgcacttgattatagactaggtcta 7482134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 257
Target Start/End: Complemental strand, 13549183 - 13548930
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| | || |||||||| |  ||| | |||||||     
T  13549183 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatc 13549085  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg- 203  Q
    ||||||| ||||||||||||||  || |||| | || || |||||||| ||| || ||||||  |||||||| |||  ||| ||||||||||| | |||     
T  13549084 tctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttgt 13548987  T
Q  204 ---ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgct 257  Q
       ||||  |||||||| |||||||||||||||||||| || |||||| ||||||||    
T  13548986 tatcttttctttactctctttatcttgtttattctttggttggattgtggttttgct 13548930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 16914353 - 16914238
Alignment:
Q  13 tcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaa-tttcttaaaactcttttgtatttctttg 111  Q
    |||||||||| | |||| ||||||||||| ||| |||||| |||||||||||| |||| || |||| |||| ||||||  ||| ||||||||| ||||||    
T  16914353 tcttgttcatgggaagagattgggaaatgggtaaaaattatgtttgttcttggagagcctgttgaagctaagtttcttctaacccttttgtatctctttg 16914254  T
Q  112 taaagaactcattgat 127  Q
    ||||||||||||||||    
T  16914253 taaagaactcattgat 16914238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 41360897 - 41361018
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||   || ||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||||  ||| | ||||||    
T  41360897 attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgta 41360995  T
Q  104 tttctttgtaaagaactcattgat 127  Q
    | ||||||| |||||||| |||||    
T  41360996 tctctttgt-aagaactcgttgat 41361018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12318712 - 12318586
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| |||||||||| |  ||| ||| ||||||| ||||||||||||||||||| ||| ||||||| |||| ||||||||||  |||  ||||    
T  12318712 aatcattgagtttcttgttcatgggtagagatttggaaatgggtagaaattaggtttgttcatggagagcttgttgaagctaatttcttgtaaccatttt 12318613  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||  | ||||||||||||||    
T  12318612 gtatgtcttctttaagaactcattgat 12318586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 283
Target Start/End: Original strand, 37168282 - 37168562
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtat 104  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | ||||||||    
T  37168282 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtat 37168380  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg 203  Q
     ||||||| ||||||||||||||  || |||| | || || |||||||| ||| || ||||||  |||||||| |||  ||| ||||||||||| | |||    
T  37168381 ctctttgt-aagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttg 37168478  T
Q  204 ----ctttcttttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
        ||||  |||||||| |||||||||||||||| ||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  37168479 ttatcttttctttactctctttatcttgtttattccttggtttgattgtggttttgctatgcacttgattatagactaggtcta 37168562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 44455142 - 44455264
Alignment:
Q  4 cattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgt 102  Q
    |||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||||||||||||||  ||||| |||||    
T  44455142 cattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgt 44455240  T
Q  103 atttctttgtaaagaactcattgat 127  Q
    || | ||||| ||||||||||||||    
T  44455241 atctttttgt-aagaactcattgat 44455264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8550976 - 8550851
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||||| | || ||||||||||  ||||| ||    
T  8550976 aatcattgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatt 8550878  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  8550877 tgtatccctttgt-aagaactcattgat 8550851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 42298158 - 42297989
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| |  |||||||||||| ||||| || ||||||||| |||| ||||||||||  ||||| |||||||     
T  42298158 tgagtgtcttgttcattggt-gagattgggaaaattggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatc 42298060  T
Q  106 tctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggacc 176  Q
    ||||||| ||||||||||||||  || |||||| || || |||||||| ||| || ||||||| ||||||||    
T  42298059 tctttgt-aagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcatggttggacc 42297989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 4552826 - 4552674
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || ||||||||||||||||| ||| ||||||||| |||| ||||||||||  ||| | ||    
T  4552826 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctt 4552728  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccc 154  Q
    |||||  |||||| |||||||||||||| ||| |||| | || || |||||||||    
T  4552727 tgtatccctttgt-aagaactcattgataatggattggagagatcaatctctccc 4552674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3156844 - 3156969
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  3156844 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 3156942  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  3156943 tgtatctctttgt-aagaactcattgat 3156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 49918329 - 49918454
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  49918329 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 49918427  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  49918428 tgtatctctttgt-aagaactcattgat 49918454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 50169399 - 50169246
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || |||||||||||| |||||||| |||||||||   || ||||||||||  ||||| ||    
T  50169399 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaactcatt 50169301  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| ||| ||||||||||  || |||||| || || ||||||||||    
T  50169300 tgtatctctttgt-aagtactcattgatagtggattgaagagatcaatctctcccc 50169246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15820286 - 15820411
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaa-atgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||| |||   || ||||| || ||| ||| ||||||||||||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  15820286 aatcattgagtgtcttgttctttggt-gatattggaaagatgggtaaaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacacatt 15820384  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||| | ||||||||||||||    
T  15820385 tgtatctcttt-ttaagaactcattgat 15820411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28220415 - 28220290
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||| |||||||   || ||| ||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  28220415 aatcattgagtgtcttattcattggt-gagattcggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 28220317  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  28220316 tgtatctctttgt-aagaactcattgat 28220290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28265743 - 28265618
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgag-tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||  || ||||||||||| |||||| | ||||||||| |||| ||||||||||  ||| | ||    
T  28265743 aatcattgagtgtcttgttcattggc-gagattgggaaaataggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatt 28265645  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| |||||||| |||||    
T  28265644 tgtatctctttgt-aagaactctttgat 28265618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31659217 - 31659342
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||| ||| || ||||||||||||  ||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  31659217 aatcattgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatt 31659315  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||| ||||||    
T  31659316 tgtatctctttgt-aagaacttattgat 31659342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 50167364 - 50167239
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| | ||||||||||||| ||||| || |||||||||   || ||||||||||  ||| | ||    
T  50167364 aatcattgagtgtcttgttcattggt-gagattgggaaaattagtagaaattagggttgttatttgtgagcttgtcaaagctaatttcttgtaacccatt 50167266  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||| |||||||||||    
T  50167265 tgtatctctttgtaaa-aactcattgat 50167239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 19754510 - 19754599
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  |||   ||||||| ||||||| ||||||||||||||    
T  19754510 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgt-aagaactcattgat 19754599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 3460716 - 3460793
Alignment:
Q  43 gtagaaattag-gtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaac 119  Q
    ||||||||||| |||||||||| ||||||||| |||| ||||||| ||  ||| ||||||||| ||||||||||||||    
T  3460716 gtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaac 3460793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 11348683 - 11348802
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| |  |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  11348683 tgagtgtcttgttcattggt-gagattgggaaaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 11348781  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||| | ||||||||||||||    
T  11348782 tctttct-aagaactcattgat 11348802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 34603591 - 34603707
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgatgatgaatt 135  Q
    ||||| |||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | |||| ||| ||||||| ||||||||||||||| || |||    
T  34603591 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttttatctctttgt-aagaactcattgatggtggatt 34603689  T
Q  136 gaataggtcgatctctcc 153  Q
    ||| || || ||||||||    
T  34603690 gaagagatcaatctctcc 34603707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 4535628 - 4535544
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| |||||||||||| ||||||  ||||   ||||||||  |||  |||||||| ||||||||||||||||||||||    
T  4535628 gtagaaattaagtttgttcttggagagcttattgaagtcaatttcttgtaacatttttgtatctctttgtaaagaactcattgat 4535544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 37560058 - 37559904
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaa-ctaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || ||| ||||| || |||||||||||  |||||||| |||| |||| ||||| ||||||||||  ||| | |    
T  37560058 aatcattgagtgtcttgttcattggt-gagattaggaaaatgggtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccat 37559960  T
Q  99 ttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    |||||| ||||||| |||||||| |||||  ||||||| | || || ||||||||||    
T  37559959 ttgtatctctttgt-aagaactcgttgatagtgaattggagagatcaatctctcccc 37559904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46064897 - 46065019
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| ||  || ||||||||||||||||| ||||||| | |||| ||||||||||  ||||| |     
T  46064897 aatcattgagtgtcttgttcatttgt-gagattgggaaaatggataaaaattaggtttgttctttgtgagctcgttgaagctaatttcttgtaactcatg 46064995  T
Q  100 tgtatttctttgtaaagaactcatt 124  Q
    ||||| ||||||| |||||||||||    
T  46064996 tgtatctctttgt-aagaactcatt 46065019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 834356 - 834231
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||||||||||||||||||||||    || ||||||||| ||  ||||||||||| |||||||| ||||||||| | || ||||||||||  ||| | ||    
T  834356 aatcattgagtgtcttgttcatttgt-gagattgggaaaatggatagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatt 834258  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| ||||||||||||||    
T  834257 tgtatccctttgt-aagaactcattgat 834231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 1833501 - 1833626
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||||| |||||||| ||||   |  |||| |||| |||||  ||||| ||    
T  1833501 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattagggttgttctttgtgaatctattgaagctaaattcttgtaactcatt 1833599  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  1833600 tgtatctctttgt-aagaactcattgat 1833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28223610 - 28223485
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||| ||||| |||||||||| | ||| ||||  ||| |||| |||| ||||||||||  ||| | ||    
T  28223610 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaattatggttgatctttctgaacttgttgaagctaatttcttgtaacccatt 28223512  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  28223511 tgtatctctttgt-aagaactcattgat 28223485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 37033256 - 37033174
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  37033256 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttctt 37033174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 193626 - 193715
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| ||||||||  | |||||| |||| ||||||||||  ||||| ||||||| ||||||| || |||||||||||    
T  193626 aaatgggtagaaattagggttgttctttattagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aataactcattgat 193715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 1050629 - 1050507
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtat 104  Q
    ||||||| ||||||||||   |||| ||||||||||| ||  ||||||||| ||||||| | ||||||  |||| ||||||||||  |||  |||||| |    
T  1050629 attgagtctcttgttcatgtgaagagattgggaaatgggtgaaaattaggtgtgttcttcgagagcttattgaagctaatttcttgtaacatttttgtgt 1050530  T
Q  105 ttctttgtaaagaactcattgat 127  Q
     |||||||||| ||||| |||||    
T  1050529 ctctttgtaaataactcgttgat 1050507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 6398631 - 6398688
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttgg 65  Q
    ||||| |||||||||| | |||| |||||||||||||||||||||||| ||||||||||    
T  6398631 tgagtttcttgttcatgggaagagattgggaaatgagtagaaattagg-ttgttcttgg 6398688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 19752701 - 19752790
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| | ||||||| |||| ||||||||||  |||   ||||||| ||||||| ||||||||||||||    
T  19752701 aaatgggtagaaattagggttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgt-aagaactcattgat 19752790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25652065 - 25652191
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||| | ||||||||   || | |||| |||||  |||||||||| || |||| || | ||| ||| |||| ||||||||||  |||||| ||    
T  25652065 aatcattgagtattttgttcatgagaaaatattgagaaattggtagaaattaagtgtgttatttgagagtttgttgaagctaatttcttgtaactctctt 25652164  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| |||||||||||||||| |||||    
T  25652165 gtatctctttgtaaagaactctttgat 25652191  T

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Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 31925860 - 31925771
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||||||||  ||||| | ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  31925860 aaatgggtagaaattagggatgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 31925771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 40122351 - 40122262
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| || |||||||| ||||||||| ||||||||| | || ||||||||||| ||||| |||||||  |||||| |||||||| |||||    
T  40122351 aaatgggtcgaaattagatttgttctttgtgagcttgtttaagctaatttcttataactcatttgtatcactttgt-aagaactctttgat 40122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 928123 - 928043
Alignment:
Q  44 tagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcatt 124  Q
    ||||||||||| ||||||||| ||||||||| |||| ||||||||||  ||| |||||| || |||||||||| ||||||||    
T  928123 tagaaattagggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttggatctctttgtaaa-aactcatt 928043  T

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Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 37282877 - 37282758
Alignment:
Q  4 cattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgt 102  Q
    ||||||||||||||||||||| | || ||||  ||||| ||| |||||||| ||||||| | ||||||||| |||| ||||||| |   ||| ||||||     
T  37282877 cattgagtgtcttgttcattgga-gagattgaaaaatg-gtataaattagggtttgttccttgtgagcttgttgaagctaatttatggtaacccttttgc 37282780  T
Q  103 atttctttgtaaagaactcatt 124  Q
    || |||||||||||||||||||    
T  37282779 atctctttgtaaagaactcatt 37282758  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37503743 - 37503655
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    ||||||||||||||||||||||||   || |||||| ||||| ||| |||||||| |||||||| |||| |||| |||| ||||||||||    
T  37503743 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtaaaaattagggttgttctttgtgaacttgttgaagctaatttctt 37503655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 197055 - 196972
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| ||||||||| | ||  |||||||||  ||||| |||||||  |||||| ||||||||||||||    
T  197055 gtagaaattagggttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatccctttgt-aagaactcattgat 196972  T

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Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 3189355 - 3189434
Alignment:
Q  47 aaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||| |||||||| |||| |||| |||| |||||||| |  ||||||||||||| | ||||| ||||||||||||||    
T  3189355 aaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgat 3189434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 3198172 - 3198251
Alignment:
Q  47 aaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||| |||||||| |||| |||| |||| |||||||| |  ||||||||||||| | ||||| ||||||||||||||    
T  3198172 aaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgat 3198251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 3207011 - 3207090
Alignment:
Q  47 aaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||| |||||||| |||| |||| |||| |||||||| |  ||||||||||||| | ||||| ||||||||||||||    
T  3207011 aaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatctttttgt-aagaactcattgat 3207090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 25652279 - 25652362
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||| ||||| ||||||||| |||| || |  ||| |||||||||||||||| ||| |||||||||||||| | ||||||||    
T  25652279 tactctctttattttgtttattatttggtttgcctgtggttttgctttacacttagttgctagattagatctaaatttgttgtt 25652362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 37033043 - 37032961
Alignment:
Q  212 tactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    |||||| |||||||||||||| ||||| || || |||  ||||||| | |||||| |||||||||||||||||| |||||||||    
T  37033043 tactctctttatcttgtttatcctttggttagagtgtgattttgctatgcacttgttttctagattagatctag-attgttgtt 37032961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 37879094 - 37879012
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaatgag-tagaaattaggtttgttcttggtgagcttgatgaaactaatttctt 89  Q
    ||||||||||||||||||   || |||||||||  || ||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  37879094 tgagtgtcttgttcattggt-gagattgggaaaataggtagaaattagggttgttctttgtgagcttgttgaagctaatttctt 37879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9109609 - 9109491
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||| ||||||||||||||||| | | || |||| ||||   | |||||||| |||| | ||||| || |||| ||||  |||||||||  ||| |||||    
T  9109609 aatccttgagtgtcttgttcatggtaggagattgagaaaatggaagaaattaagtttttacttggagaacttgttgaagttaatttcttgtaaccctttt 9109510  T
Q  101 gtatttctttgtaaagaac 119  Q
    |||| ||||||||||||||    
T  9109509 gtatctctttgtaaagaac 9109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 34603754 - 34603827
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    |||||||| |||||||||||||||| ||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  34603754 tttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttgattatagactaggtcta 34603827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 2263106 - 2263038
Alignment:
Q  59 ttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||||||| ||||  |||||||||  ||| ||||| ||| | ||||||||||||| ||||||    
T  2263106 ttcttggtgagcttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgat 2263038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 13316499 - 13316416
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||||||| ||||||  ||||||||||||||    
T  13316499 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg-gaagaactcattgat 13316416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 20762693 - 20762776
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||||||| |||| || ||||||||||||||    
T  20762693 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttcgt-aagaactcattgat 20762776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 36683711 - 36683771
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||| ||||| ||||| ||| |||| ||||||||||  ||||| ||||||    
T  36683711 gtagaaattaggtttattctttgtgagtttgttgaagctaatttcttgtaactcatttgta 36683771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 27633 - 27433
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggt-ttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    |||| |||||| ||||||||   | |||| |||| |||| |||||||||||| || |||||||||  ||||||| |||| ||||||||||  ||||| ||    
T  27633 aatctttgagtctcttgttctagggaagagattgtgaaaagagtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaactcatt 27534  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc-atagcaggtcattgttggaccaaacaaggtaaacatttcttga 198  Q
    ||||| |||||||||| |||| ||||||  || |||| | || || |||||||||| |||| |||||||||||||||| ||  |||||||||||| ||||    
T  27533 tgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggtcattgttggaccgaattaggtaaacatttattga 27434  T
Q  199 t 199  Q
    |    
T  27433 t 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 11712191 - 11711989
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| | |||||| ||| |||| |||| ||||  | || ||||||||||| |||| | | ||||||| |||| |||||||||| |||| ||||    
T  11712191 aatcattgagtcttttgttctttggaagagattgagaaaataatataaattaggttttgttccttgagagcttgttgaagctaatttcttgaaacccttt 11712092  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccc-catagcaggtcattgttggaccaaacaaggtaaacatttcttga 198  Q
    | ||| |||||||||| |||||||||||  || |||||| || || ||||||||| || || ||||||||||||| || ||   ||||||||||||||||    
T  11712091 tatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattgttggtcctaattgggtaaacatttcttga 11711992  T
Q  199 tat 201  Q
    |||    
T  11711991 tat 11711989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 294
Target Start/End: Original strand, 10240263 - 10240400
Alignment:
Q  162 ggtcattgttggaccaaacaaggtaaacatttcttgatattgctttctttt----actctttttatcttgttta-ttctttgcttcgattgtagttttgc 256  Q
    ||||||||||||| ||||| |||||||||||||||| | ||| | ||||||    ||||| ||||||||||||| || |||| ||||||||| |||||||    
T  10240263 ggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttcttcactctctttatcttgtttatttttttggttcgattgtggttttgc 10240362  T
Q  257 tttacactt-gtttctagattagatctagaattgttgtt 294  Q
    |||||| || ||||||||||||||||||| |||||||||    
T  10240363 tttacatttcgtttctagattagatctag-attgttgtt 10240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 4731637 - 4731790
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| ||| |||| ||||||||| |||| ||||||||||  ||| | ||    
T  4731637 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgctctttgtgagcttgttgaacctaatttcttgtaacccatt 4731735  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| ||||||||||||||  || |||| | || |||||||||||||    
T  4731736 tgtatctctttgt-aagaactcattgatagtggattggagagatcgatctctcccc 4731790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 19491884 - 19491763
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||   || ||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||||  ||| | ||||||    
T  19491884 attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgta 19491786  T
Q  104 tttctttgtaaagaactcattgat 127  Q
    | ||||||| |||||||| |||||    
T  19491785 tctctttgt-aagaactcgttgat 19491763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 27811257 - 27811410
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  27811257 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatt 27811355  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| |||||| |||||||  || |||||| || || ||||||||||    
T  27811356 tgtatctctttgt-aagaacccattgatagtggattgaagagatcaatctctcccc 27811410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 43036402 - 43036527
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||||||||||||||  || || ||    
T  43036402 aatcattgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaattcatt 43036500  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  43036501 tgtatctctttgt-aagaactcattgat 43036527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 11384000 - 11384260
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||| ||| |||| ||||||||||  ||||| ||||||| ||||||||| |||| |||||||  || ||||    
T  11384000 aaatgggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaacccattgatactggattg 11384098  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgc----tttcttttactctttttatcttgttta 231  Q
     | |  ||||||||||| ||| || |||| |  |||||||| |||  ||| ||||||| ||| | |||     |||  |||||||| |||||||||||||    
T  11384099 gagacatcgatctctcctccagagtaggttaa-gttggaccgaactgggtgaacattttttggtgttgtctatttttctttactctctttatcttgttta 11384197  T
Q  232 ttctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    | ||||| || |||||| |||||||| | |||||| |||||||||||||||||| |||||||||    
T  11384198 tcctttggttagattgtggttttgctatgcacttgttttctagattagatctag-attgttgtt 11384260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42498172 - 42498298
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  |  |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| |||    
T  42498172 aatcattgagtgtcttgttcattggt-gagattgggaaaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaaccctt 42498270  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||||| ||||||||||||||    
T  42498271 ttgtatttctttgt-aagaactcattgat 42498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3303859 - 3303706
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| ||||||| ||||   || ||||||||| || |||||||||| |||||||||| ||||||||| | || ||||||||||  ||||| ||    
T  3303859 aatcattgagtatcttgtttattggt-gagattgggaaaatgggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatt 3303761  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||||| ||||||||||||  || |||||| || || ||||||||||    
T  3303760 tgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctctcccc 3303706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 15212765 - 15212918
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||| ||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  15212765 aatcattgaatgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatt 15212863  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| |||||||||||||| ||| |||| | || || ||||||||||    
T  15212864 tgtatctctttgt-aagaactcattgataatggattggagagatcaatctctcccc 15212918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 40328794 - 40328884
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactc-ttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||||||||||||||||| ||||||||| | |||||||||||||  ||||| |||||||| ||||||| ||||||||||||||    
T  40328794 aaatgggtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgt-aagaactcattgat 40328884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7597592 - 7597769
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| | |||||| | | |||| ||||| ||| ||| | |||| |||||| |||||||| ||||||| |||| ||||||||||| ||  ||||    
T  7597592 aatcattgagtcttttgttcttgggaagagattggaaaaagagaataaatcaggttttgttcttggagagcttgttgaagctaatttcttataatccttt 7597691  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctct-ccccatagcaggtcattgttggacc 176  Q
    ||||| |||||||||||||  |||||||  || |||| | || || |||||| |||||||| ||||||||||| ||||    
T  7597692 tgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggtcattgttagacc 7597769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 294
Target Start/End: Original strand, 3772214 - 3772467
Alignment:
Q  44 tagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaataggt 143  Q
    |||||||||||||||||||| ||||||||  | || ||||||||||  ||||| ||||||| ||||||||| ||| | ||||||  || |||| | || |    
T  3772214 tagaaattaggtttgttctttgtgagcttatttaagctaatttcttgtaactcatttgtatatctttgtaa-gaatttattgatagtggattggagagat 3772312  T
Q  144 cgatctctccc-catagcaggtcattgttggaccaaacaaggtaaacatttcttgatattgctttctttt----actctttttatcttgtttattctttg 238  Q
    | |||| || | || || ||||||  ||||||||||||  | |||| |||||||| |  || | ||||||    ||||| ||||||||||||||||||||    
T  3772313 caatctatctctcagagtaggtcaa-gttggaccaaactggataaatatttcttggtggtgttatcttttctctactctctttatcttgtttattctttg 3772411  T
Q  239 cttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
     || |||||| |||||||| | |||||| ||||||||||| |||||| |||||||||    
T  3772412 gttagattgtggttttgctatgcacttgatttctagattaaatctag-attgttgtt 3772467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33352129 - 33352254
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg-aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||| ||||| ||| |||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  33352129 aatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtaaaaattagggttgttctttgtgaacttgttgaacctaatttcttgtaacccatt 33352227  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    ||||| ||||||| ||||||||||||||    
T  33352228 tgtatctctttgt-aagaactcattgat 33352254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 283
Target Start/End: Complemental strand, 42435144 - 42434894
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattg 136  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||  || ||||    
T  42435144 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattg 42435046  T
Q  137 aataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgttta 231  Q
     | |  || |||||||| ||| || ||||||  |||||||| |||  ||| ||||||||||| | |||    ||||  |||||| | |||||||||||||    
T  42435045 gagaaatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttctttatcttgttta 42434947  T
Q  232 ttctttgc-ttcgattgtagttttgctttacacttgtttctagattagatcta 283  Q
    ||| |||| || |||||| |||||||| | |||||| || |||| ||| ||||    
T  42434946 ttccttgctttggattgtggttttgctatgcacttgattatagactaggtcta 42434894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 44353772 - 44353925
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| |||||||||||    || ||||||||| || |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| | ||    
T  44353772 aatcattgagtatcttgttcatttgt-gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacatt 44353870  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| ||||||| ||||||||||||||  || |||||| || || ||||||||||    
T  44353871 tgtatctctttgt-aagaactcattgatagtggattgaaaagatcaatctctcccc 44353925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 3231984 - 3231858
Alignment:
Q  3 tcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactcttttg 101  Q
    ||||||||| |||||||| | | |||| |||| ||||   |||||||||||| ||||||||| ||||||||| |||| ||||||| ||  |||  |||||    
T  3231984 tcattgagtctcttgttcttaggaagagattgagaaaaatgtagaaattaggctttgttcttcgtgagcttgttgaagctaattttttttaaccattttg 3231885  T
Q  102 tatttctttgtaaagaactcattgatg 128  Q
    ||| ||||||||||||||| |||||||    
T  3231884 tatctctttgtaaagaacttattgatg 3231858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 30143355 - 30143444
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||||||| ||||||| ||||||||||||||    
T  30143355 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgat 30143444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 40221760 - 40221849
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||| |||||||||||| |||||||| ||||||||| |||||||||||||||  ||| | ||||||| ||||||| |||||||| |||||    
T  40221760 aaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgat 40221849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 4283509 - 4283628
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    ||||||||||||||||||   || ||||||||| || |||||||||||| ||||| || ||||||||| |||| ||||||||||  ||| | |||||||     
T  4283509 tgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 4283607  T
Q  106 tctttgtaaagaactcattgat 127  Q
    ||||||| ||||||||||||||    
T  4283608 tctttgt-aagaactcattgat 4283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4162479 - 4162601
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    |||||||||||||||||||||||   ||  |  || ||||| |||||| |||||||||||||| | || |||| |||| ||||||||||  ||||| |||    
T  4162479 aatcattgagtgtcttgttcatt---agtgagaggaaaatgggtagaagttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcattt 4162575  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  4162576 gtatctctttgt-aagaactcattgat 4162601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41266947 - 41267067
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||| |||||||| | | ||||  ||| ||||   ||||||||||||||| |||||| | || |||| ||| |||||||||||  ||||||||    
T  41266947 aatcattgagtctcttgttcttaggaagagtttgagaaaatggtagaaattaggttttgttcttagagaacttgttgagactaatttcttgtaactcttt 41267046  T
Q  100 tgtatttctttgtaaagaact 120  Q
    ||||||||||| |||||||||    
T  41267047 tgtatttctttctaaagaact 41267067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8965880 - 8965755
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||||||||   |||||||||| |||||||||||  |||| ||| ||||  |||||||||| ||| ||||    
T  8965880 aatcattgagtgtcttgttcattg-gtgagattgggaaaaaggtagaaattagggtttgttctttatgagtttgttgaagttaatttcttataacccttt 8965782  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    | ||| ||||||| ||||||||||||||    
T  8965781 tatatctctttgt-aagaactcattgat 8965755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 9765728 - 9765849
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgta 103  Q
    ||||||||||||||||||||   || ||||||||| || |||||||||||| |||||||| |||||||||   || ||||||||||  ||| | ||||||    
T  9765728 attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgta 9765826  T
Q  104 tttctttgtaaagaactcattgat 127  Q
    | ||||||| ||||||||||||||    
T  9765827 tctctttgt-aagaactcattgat 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30291585 - 30291699
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattagg-tttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| ||||||||| ||||||||| |||| ||||||||||  ||||| |    
T  30291585 aatcattgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcat 30291683  T
Q  99 ttgtatttctttgtaa 114  Q
    ||||||  ||||||||    
T  30291684 ttgtatcactttgtaa 30291699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34254519 - 34254395
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || ||||||||| | |||||||||||| |||||||| |||| ||||   ||  |||||||||  ||| |||||    
T  34254519 aatcattgagtgtcttgttcattg-gtgagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaaccctttt 34254421  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||| ||||||    
T  34254420 gtatctctttgt-aagaacttattgat 34254395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 285
Target Start/End: Original strand, 11137152 - 11137294
Alignment:
Q  150 ctccccatagcaggtcattgttggaccaaac-aaggtaaacatttctt-gatattgctttctttt----actctttttatcttgtttattctttgcttcg 243  Q
    |||| ||||| |||||||||||||||| ||| |||||||| | ||||| ||| ||| ||| ||||    ||||| |||||||||||||||| ||| ||||    
T  11137152 ctcctcatagtaggtcattgttggaccgaactaaggtaaagaattctttgatgttgttttgttttctctactctctttatcttgtttattcattggttcg 11137251  T
Q  244 attgtagttttgctttacacttg-tttctagattagatctaga 285  Q
    ||||| ||||| ||||| ||||| || ||||||||||| ||||    
T  11137252 attgtggtttttctttatacttgattgctagattagatttaga 11137294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 1822313 - 1822429
Alignment:
Q  44 tagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||||||||  ||| ||||| ||| | |||||||| |||||| | ||  ||||||| | ||     
T  1822313 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggagaga 1822412  T
Q  143 tcgatctctccccatag 159  Q
    || ||||||||||||||    
T  1822413 tcaatctctccccatag 1822429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 1856758 - 1856874
Alignment:
Q  44 tagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||||||||  ||| ||||| ||| | |||||||| |||||| | ||  ||||||| | ||     
T  1856758 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggagaga 1856857  T
Q  143 tcgatctctccccatag 159  Q
    || ||||||||||||||    
T  1856858 tcaatctctccccatag 1856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 12702781 - 12702698
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| |||| |||| ||||||||||  ||| ||||||| | ||||||| ||||||||||||||    
T  12702781 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctctttgt-aagaactcattgat 12702698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 1345560 - 1345407
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||| |||||||||||||    || ||||||||| || |||||||||||| |||||||| ||||| ||  |||| ||||||||||  ||| | |     
T  1345560 aatcattgaatgtcttgttcatttgt-gagattgggaaaatgtgtagaaattagggttgttctttgtgagtttattgaagctaatttcttgtaacccata 1345462  T
Q  100 tgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcccc 155  Q
    ||||| |||||| |||||||||||||||  || |||||| || || ||||||||||    
T  1345461 tgtatctctttg-aaagaactcattgatagtggattgaagagttcaatctctcccc 1345407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18141800 - 18141924
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttt 99  Q
    ||||||||||||||||||||||||   || |||| |||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | ||    
T  18141800 aatcattgagtgtcttgttcattggt-gagattgtgaaaatgggtagaaattagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatt 18141897  T
Q  100 tgtatttctttgtaaagaactcattgat 127  Q
    |||||  |||||| |||||||| |||||    
T  18141898 tgtatcactttgt-aagaactctttgat 18141924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 10240185 - 10240259
Alignment:
Q  53 ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||||||| ||||||||| |||| ||||||||||  |||  | ||| || ||||||||||||||||||||||    
T  10240185 ggtttgttctttgtgagcttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgat 10240259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34256695 - 34256571
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctttt 100  Q
    ||||||||||||||||||||||||   || ||||| |||   |||||||||||| |||||||| |||| ||||   ||  |||||||||  ||| |||||    
T  34256695 aatcattgagtgtcttgttcattggt-gagattggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaaccctttt 34256597  T
Q  101 gtatttctttgtaaagaactcattgat 127  Q
    |||| ||||||| ||||||||||||||    
T  34256596 gtatctctttgt-aagaactcattgat 34256571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 193
Target Start/End: Complemental strand, 29796510 - 29796317
Alignment:
Q  3 tcattgagtgtcttgttcattgcaagacattgggaaatgagtagaaatta-ggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttg 101  Q
    ||||||||| |||||||| |   |||| ||||||||| |||||||||| | ||||||||||||| || |||| |||| || |||||||  |||  |||||    
T  29796510 tcattgagtctcttgttcttgagaagagattgggaaaagagtagaaatcaaggtttgttcttggagaacttgttgaagctgatttcttgtaacatttttg 29796411  T
Q  102 tatttctttgtaaagaa-ctcattgatgatgaattgaataggtcgatctctccccata-gcaggtcattgttggaccaaacaaggtaaacattt 193  Q
    ||  | |||||||| || |||||| || ||| |||| | || || ||||||||||  | | |||||||||||||||| |||  |||||||||||    
T  29796410 tacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaacattt 29796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31218235 - 31218361
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaatga--gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  |  |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||    
T  31218235 aatcattgagtgtcttgttcattggt-gagattgggaaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctt 31218333  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||  ||||||||||||||    
T  31218334 ttgtatctctttg-gaagaactcattgat 31218361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 30909389 - 30909459
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaa 114  Q
    |||||||||||||||  |||||| ||||||| | |||||||||||||  ||||| ||||||| |||||||||    
T  30909389 gtagaaattaggtttactcttggagagcttgtttaaactaatttcttgtaactc-tttgtatctctttgtaa 30909459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 40328980 - 40329043
Alignment:
Q  223 tcttgtttattctttgcttcgattgtagttttgctttacacttgttt-ctagattagatctaga 285  Q
    |||||||||| ||||| || |||||| |||||||| | ||||||||| ||||||||||||||||    
T  40328980 tcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctaga 40329043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 40221936 - 40221994
Alignment:
Q  210 tttactctttttatcttgtttattctttgcttcgattgtagttttgctttacacttgtt 268  Q
    |||||||| ||||||||||| |||||||| || |||||| |||||||| | ||||||||    
T  40221936 tttactctctttatcttgttcattctttggttggattgtggttttgctatgcacttgtt 40221994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 1746365 - 1746283
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| ||||||||| ||||||  ||||||||||||||    
T  1746365 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg--aagaactcattgat 1746283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 2999809 - 2999723
Alignment:
Q  184 gtaaacatttcttgatattgctttctttt----actctttttatcttgtttattctttgcttcgattgtagttttgctttacacttg 266  Q
    |||||||||||||||| ||| | ||||||    ||||| |||||||||||||||||||| || ||||||  ||||||| | ||||||    
T  2999809 gtaaacatttcttgatgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttg 2999723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 490468 - 490384
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  490468 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgat 490384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 434511 - 434637
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattggg--aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || ||||||  ||| | |||||||||||| |||||||| |||| ||||   || ||||||||||  ||| |||    
T  434511 aatcattgagtgtcttgttcattggt-gagattggggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctt 434609  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||| ||||||||||||||    
T  434610 ttgtatctctttgt-aagaactcattgat 434637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 294
Target Start/End: Original strand, 10564 - 10765
Alignment:
Q  97 ttttgtatttctttgtaaagaactcattgatgatgaattgaataggtcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttct 195  Q
    |||||||| ||||||||| |||||| |||||  || |||||| || || |||||||| ||| || ||||||  |||||||| |||  |||||||||||||    
T  10564 ttttgtatctctttgtaa-gaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtcaa-gttggaccgaactgggtaaacatttct 10661  T
Q  196 tgatattgctttcttt----tactct-ttttatcttgtttattctttgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattg 289  Q
    || | ||| | |||||    |||||| ||||||||||||||||||||| || |||||||||||| || |||||||| ||||||||||| |||||| ||||    
T  10662 tggtgttgttatctttcctctactctcttttatcttgtttattctttgattagattgtagttttactatacacttgatttctagattaaatctag-attg 10760  T
Q  290 ttgtt 294  Q
    |||||    
T  10761 ttgtt 10765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 294
Target Start/End: Complemental strand, 18150 - 17895
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgatgatgaattgaatagg 142  Q
    |||||||||||| |||||| | ||||||||| |||| ||||||||||  ||||| ||||||| |||||||||  |||||||||||  || |||| | ||     
T  18150 gtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa--aactcattgatagtggattggagaga 18053  T
Q  143 tcgatctctcc-ccatagcaggtcattgttggaccaaacaaggtaaacatttcttgatattg----ctttcttttactctttttatcttgtttatt-ctt 236  Q
    || |||||||| |||  | ||||||   ||||| | |||  ||| ||||||||||| | |||    ||||  |||||||| ||||||||||||||| |||    
T  18052 tcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattcctt 17953  T
Q  237 tgcttcgattgtagttttgctttacacttg-tttctagattagatctagaattgttgtt 294  Q
    || || |||||| |||||||| | || ||| |||||||||||||||||| |||||||||    
T  17952 tggttagattgtggttttgctatgcatttgttttctagattagatctag-attgttgtt 17895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 285
Target Start/End: Complemental strand, 1580 - 1296
Alignment:
Q  5 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtat 104  Q
    |||||||  ||||||||| | |||| |||| |||||  ||| |||||||||||||||| |||||||||| ||||  | |||| ||  ||| ||||||| |    
T  1580 attgagttacttgttcatgggaagagattgtgaaattggtaaaaattaggtttgttctgggtgagcttggtgaagttgattttttgcaacccttttgttt 1481  T
Q  105 ttctttgtaaagaactcattgatgatgaattgaataggtcgatctctccccatagcaggtcattgttggaccaaacaaggtaaacatttctt-gatattg 203  Q
     |||   ||||||||||||| ||  | ||  | | || ||  |||||||| | || |||||||||||||||||||   |||||||| ||||| ||| ||     
T  1480 ctctgcataaagaactcattaatagtcaagaggagagatc--tctctcccaagagtaggtcattgttggaccaaattgggtaaacaattctttgatgttt 1383  T
Q  204 ctttctt----ttactctttttatcttgtttattctttgcttcgattgtagttttgctttacactt-gtttctagattagatctaga 285  Q
     | ||||    ||||||| |||||||| |||||| |||| || |||||| ||||| |||||||||| ||||||||||||||||||||    
T  1382 ttctcttctctttactctctttatcttatttattttttggtttgattgtggttttactttacacttggtttctagattagatctaga 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 80466 - 80338
Alignment:
Q  7 tgagtgtcttgttcattgcaagacattgggaaa-tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatt 105  Q
    |||||||||||||||||||  || ||||||||| || |||||||||||| |||||||| ||||||||| |||| ||||||||||  ||| | |||||||     
T  80466 tgagtgtcttgttcattgct-gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatc 80368  T
Q  106 tctttgtaaagaactcattgatgatgaattg 136  Q
    | ||||| |||||||||| |||  |||||||    
T  80367 tttttgt-aagaactcatagatagtgaattg 80338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11536 - 11661
Alignment:
Q  1 aatcattgagtgtcttgttcattgcaagacattgggaaa--tgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactctt 98  Q
    ||||||||||||||||||||||||   || |||||||||  || |||||||||||| |||||||| |||| ||||   || ||||||||||  ||||| |    
T  11536 aatcattgagtgtcttgttcattggt-gagattgggaaaaatg-gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcat 11633  T
Q  99 ttgtatttctttgtaaagaactcattgat 127  Q
    |||||| ||||||| ||||||||||||||    
T  11634 ttgtatctctttgt-aagaactcattgat 11661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 20568 - 20479
Alignment:
Q  37 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||| |||||||||||||||| || |||| |||| |||| ||||||||||  ||| | ||||||| ||||||| |||||||| |||||    
T  20568 aaatgagcagaaattaggtttgttttttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgat 20479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 25074 - 25158
Alignment:
Q  43 gtagaaattaggtttgttcttggtgagcttgatgaaactaatttcttaaaactcttttgtatttctttgtaaagaactcattgat 127  Q
    ||||||| ||| ||||||||| | ||| ||| ||||  |||||||||  |||  |||||||| ||||||||||||||||||||||    
T  25074 gtagaaactagttttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgat 25158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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