View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12026_high_15 (Length: 242)
Name: NF12026_high_15
Description: NF12026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12026_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 43533610 - 43533832
Alignment:
| Q |
3 |
aagttgtttatccaaatagggaatagacctcacctcgctttgtatatggtggctgacaccccagacaaacaaagtgctggcgccatgtattgtagcgaaa |
102 |
Q |
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| T |
43533610 |
aagttgtttatccaaatagggaatagacctcacctcgctttgtatatggtggctgacaccccagacaaacaaagtgctggcgccatgtattgtagcgaaa |
43533709 |
T |
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| Q |
103 |
agtatcatagcagttccaatccatgtatgatacttaactgaagcttcaaattgaataccaaatatgcgaaatatagccaaccctcttaaaattggaagaa |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43533710 |
agtatcatagcagttccaatccatgtatgatacttaactgaagcttcaaattgaataccaaatatgcgaaatatagccaaccctcttaaaattggaagaa |
43533809 |
T |
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| Q |
203 |
gaagcaaagtcaaacaagcttct |
225 |
Q |
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||||||||| ||||||||||||| |
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| T |
43533810 |
gaagcaaagccaaacaagcttct |
43533832 |
T |
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