View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12026_low_4 (Length: 615)

Name: NF12026_low_4
Description: NF12026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12026_low_4
NF12026_low_4
[»] chr2 (44 HSPs)
chr2 (159-597)||(41656310-41656748)
chr2 (12-149)||(6204506-6204643)
chr2 (153-216)||(4003397-4003461)
chr2 (153-216)||(1364802-1364866)
chr2 (153-216)||(11515013-11515077)
chr2 (153-216)||(37194236-37194300)
chr2 (157-216)||(15555394-15555454)
chr2 (153-216)||(34757574-34757638)
chr2 (52-148)||(39063805-39063901)
chr2 (153-216)||(43190587-43190651)
chr2 (157-216)||(43572592-43572652)
chr2 (157-216)||(3737274-3737333)
chr2 (153-205)||(6656087-6656140)
chr2 (152-216)||(26905772-26905837)
chr2 (153-216)||(13018526-13018590)
chr2 (52-148)||(33361755-33361851)
chr2 (157-216)||(36030786-36030846)
chr2 (75-149)||(16871538-16871612)
chr2 (167-216)||(40211986-40212036)
chr2 (75-148)||(20268028-20268101)
chr2 (75-148)||(20268122-20268195)
chr2 (157-216)||(5322167-5322227)
chr2 (153-216)||(21626092-21626156)
chr2 (157-217)||(26051696-26051756)
chr2 (153-216)||(26599297-26599361)
chr2 (52-148)||(34229047-34229143)
chr2 (153-185)||(35412278-35412310)
chr2 (109-148)||(9375273-9375312)
chr2 (52-135)||(10147799-10147882)
chr2 (52-135)||(10148586-10148669)
chr2 (159-210)||(11949881-11949932)
chr2 (153-196)||(21834910-21834953)
chr2 (158-216)||(41100153-41100212)
chr2 (151-205)||(39181045-39181099)
chr2 (153-186)||(16625860-16625893)
chr2 (155-216)||(28539474-28539535)
chr2 (157-217)||(39750124-39750185)
chr2 (59-148)||(41983245-41983334)
chr2 (52-148)||(4854473-4854569)
chr2 (160-216)||(16813611-16813667)
chr2 (160-216)||(16852890-16852946)
chr2 (152-216)||(30523215-30523279)
chr2 (52-116)||(34173832-34173896)
chr2 (157-217)||(35550205-35550265)
[»] chr7 (28 HSPs)
chr7 (1-148)||(18947286-18947433)
chr7 (26-148)||(18948200-18948322)
chr7 (12-149)||(43702721-43702858)
chr7 (151-216)||(42113007-42113072)
chr7 (153-216)||(6746617-6746681)
chr7 (153-216)||(15748997-15749061)
chr7 (157-216)||(45940448-45940508)
chr7 (52-149)||(41347090-41347187)
chr7 (160-216)||(43741681-43741738)
chr7 (153-216)||(4058187-4058251)
chr7 (153-216)||(23466045-23466109)
chr7 (160-216)||(24924628-24924684)
chr7 (153-216)||(38505382-38505446)
chr7 (159-213)||(10592002-10592056)
chr7 (156-216)||(17884242-17884300)
chr7 (153-216)||(16805615-16805679)
chr7 (52-148)||(25675719-25675815)
chr7 (67-142)||(16980477-16980552)
chr7 (165-216)||(30301972-30302023)
chr7 (161-216)||(42267055-42267110)
chr7 (168-213)||(42253942-42253988)
chr7 (78-148)||(46295646-46295716)
chr7 (164-216)||(13697262-13697315)
chr7 (167-216)||(44858149-44858198)
chr7 (160-216)||(19791667-19791723)
chr7 (157-216)||(33872159-33872219)
chr7 (160-216)||(38233784-38233840)
chr7 (112-148)||(42252829-42252865)
[»] chr3 (36 HSPs)
chr3 (26-146)||(46461865-46461984)
chr3 (151-216)||(38639556-38639622)
chr3 (61-149)||(34936714-34936802)
chr3 (152-216)||(50948174-50948239)
chr3 (157-216)||(1339946-1340006)
chr3 (157-216)||(33944688-33944748)
chr3 (153-216)||(53664647-53664711)
chr3 (49-148)||(55444550-55444649)
chr3 (158-210)||(517685-517738)
chr3 (153-210)||(30995839-30995896)
chr3 (157-216)||(1132973-1133033)
chr3 (153-216)||(3537177-3537241)
chr3 (160-216)||(29623213-29623269)
chr3 (153-216)||(35283056-35283120)
chr3 (153-216)||(37674188-37674252)
chr3 (153-216)||(40118932-40118996)
chr3 (72-148)||(40613792-40613868)
chr3 (158-216)||(25754150-25754209)
chr3 (157-211)||(27197225-27197279)
chr3 (53-143)||(55439870-55439960)
chr3 (159-196)||(22225341-22225378)
chr3 (52-148)||(20918278-20918374)
chr3 (52-148)||(20927240-20927336)
chr3 (157-216)||(21777684-21777744)
chr3 (165-216)||(24588331-24588383)
chr3 (157-216)||(32858803-32858863)
chr3 (151-205)||(5939840-5939895)
chr3 (153-196)||(33909018-33909061)
chr3 (153-216)||(49183665-49183728)
chr3 (165-216)||(54089502-54089553)
chr3 (155-216)||(45570991-45571053)
chr3 (112-149)||(46462682-46462719)
chr3 (157-213)||(48908925-48908982)
chr3 (52-148)||(37886654-37886750)
chr3 (157-216)||(49855856-49855916)
chr3 (153-209)||(54917740-54917796)
[»] chr5 (24 HSPs)
chr5 (1-149)||(29984746-29984895)
chr5 (156-216)||(35683521-35683582)
chr5 (157-216)||(10843017-10843077)
chr5 (52-140)||(19778734-19778822)
chr5 (153-216)||(39649540-39649604)
chr5 (157-216)||(43496909-43496968)
chr5 (38-148)||(43379443-43379553)
chr5 (153-216)||(2679914-2679978)
chr5 (157-216)||(5772768-5772828)
chr5 (151-216)||(5836854-5836921)
chr5 (157-216)||(22103490-22103548)
chr5 (75-149)||(33529735-33529809)
chr5 (153-213)||(38568418-38568479)
chr5 (52-148)||(3635495-3635591)
chr5 (157-216)||(6491157-6491217)
chr5 (153-216)||(10955738-10955802)
chr5 (153-215)||(15974309-15974372)
chr5 (157-216)||(19389866-19389925)
chr5 (165-216)||(29022600-29022651)
chr5 (154-216)||(3925829-3925891)
chr5 (157-205)||(13569336-13569385)
chr5 (152-216)||(29709491-29709556)
chr5 (153-216)||(10437955-10438019)
chr5 (71-143)||(37839967-37840039)
[»] scaffold0031 (1 HSPs)
scaffold0031 (151-216)||(93554-93620)
[»] chr6 (15 HSPs)
chr6 (61-148)||(18065719-18065806)
chr6 (153-216)||(1567250-1567314)
chr6 (157-216)||(32719424-32719484)
chr6 (152-216)||(33590376-33590440)
chr6 (153-216)||(11180207-11180271)
chr6 (153-216)||(20820578-20820642)
chr6 (162-216)||(22788566-22788620)
chr6 (151-216)||(32221970-32222036)
chr6 (165-216)||(4089445-4089496)
chr6 (153-196)||(28551954-28551997)
chr6 (153-216)||(33212301-33212364)
chr6 (59-149)||(3163488-3163578)
chr6 (152-196)||(2502436-2502480)
chr6 (165-216)||(24379618-24379670)
chr6 (153-216)||(26713832-26713896)
[»] chr4 (30 HSPs)
chr4 (52-149)||(39310395-39310492)
chr4 (153-216)||(12708882-12708946)
chr4 (153-216)||(29114281-29114345)
chr4 (153-216)||(30198819-30198883)
chr4 (151-213)||(8828249-8828311)
chr4 (151-216)||(46176975-46177041)
chr4 (52-143)||(24484788-24484879)
chr4 (153-216)||(28175512-28175576)
chr4 (153-216)||(35959165-35959229)
chr4 (153-216)||(38136882-38136946)
chr4 (158-216)||(16318591-16318650)
chr4 (153-216)||(44076573-44076636)
chr4 (153-196)||(52636730-52636773)
chr4 (158-196)||(368043-368081)
chr4 (159-216)||(45823530-45823588)
chr4 (156-216)||(54205811-54205872)
chr4 (165-216)||(516045-516097)
chr4 (52-148)||(31414820-31414916)
chr4 (161-196)||(8827888-8827923)
chr4 (158-216)||(25843818-25843877)
chr4 (97-148)||(29079298-29079349)
chr4 (161-216)||(32866779-32866833)
chr4 (78-148)||(9483662-9483732)
chr4 (151-216)||(21081317-21081383)
chr4 (151-216)||(47063660-47063725)
chr4 (165-213)||(21443004-21443052)
chr4 (152-196)||(27143145-27143189)
chr4 (157-201)||(27485306-27485350)
chr4 (153-216)||(42650605-42650669)
chr4 (157-216)||(50494696-50494756)
[»] chr1 (31 HSPs)
chr1 (156-216)||(52068185-52068246)
chr1 (153-216)||(5584474-5584538)
chr1 (153-216)||(17760523-17760587)
chr1 (151-216)||(69701-69766)
chr1 (157-216)||(29092059-29092119)
chr1 (153-216)||(34154376-34154440)
chr1 (153-216)||(36269712-36269776)
chr1 (153-216)||(37649664-37649728)
chr1 (157-216)||(41817347-41817407)
chr1 (75-148)||(18526899-18526972)
chr1 (160-216)||(46001542-46001599)
chr1 (165-217)||(52073495-52073548)
chr1 (80-148)||(21071279-21071347)
chr1 (153-216)||(27255178-27255242)
chr1 (165-216)||(28848837-28848889)
chr1 (153-201)||(33324603-33324651)
chr1 (153-216)||(32672583-32672646)
chr1 (153-216)||(41432814-41432877)
chr1 (161-196)||(42333622-42333657)
chr1 (153-196)||(50587016-50587059)
chr1 (151-193)||(18909116-18909158)
chr1 (159-213)||(41428045-41428099)
chr1 (75-148)||(15668275-15668348)
chr1 (160-216)||(23412001-23412058)
chr1 (151-192)||(37955142-37955183)
chr1 (152-216)||(50226008-50226073)
chr1 (161-213)||(10449780-10449832)
chr1 (153-216)||(27102872-27102936)
chr1 (168-216)||(33579219-33579267)
chr1 (153-216)||(43036361-43036424)
chr1 (152-216)||(50097596-50097660)
[»] scaffold0136 (1 HSPs)
scaffold0136 (157-216)||(2071-2131)
[»] scaffold0128 (1 HSPs)
scaffold0128 (153-216)||(26348-26412)
[»] chr8 (25 HSPs)
chr8 (157-216)||(23932606-23932666)
chr8 (75-142)||(39309664-39309731)
chr8 (16-82)||(2581193-2581259)
chr8 (75-149)||(39308667-39308741)
chr8 (90-148)||(43235431-43235489)
chr8 (157-213)||(21173909-21173966)
chr8 (151-196)||(43007685-43007730)
chr8 (153-216)||(4166690-4166754)
chr8 (92-147)||(43235993-43236048)
chr8 (157-203)||(13227683-13227729)
chr8 (151-216)||(43438342-43438407)
chr8 (153-216)||(79661-79725)
chr8 (52-148)||(6461880-6461976)
chr8 (153-216)||(26772690-26772754)
chr8 (153-216)||(39193900-39193964)
chr8 (153-216)||(31149882-31149945)
chr8 (155-185)||(13258470-13258500)
chr8 (166-216)||(22330673-22330723)
chr8 (111-140)||(5940760-5940789)
chr8 (153-201)||(4873323-4873371)
chr8 (153-216)||(12506244-12506308)
chr8 (165-216)||(40985122-40985174)
chr8 (37-148)||(41889323-41889435)
chr8 (52-148)||(42578709-42578805)
chr8 (159-211)||(44251611-44251663)
[»] scaffold0051 (4 HSPs)
scaffold0051 (154-215)||(740-801)
scaffold0051 (154-215)||(3617-3678)
scaffold0051 (160-216)||(6805-6862)
scaffold0051 (160-216)||(7788-7845)
[»] scaffold0248 (1 HSPs)
scaffold0248 (157-216)||(244-304)
[»] scaffold0330 (2 HSPs)
scaffold0330 (52-143)||(13214-13305)
scaffold0330 (52-148)||(12517-12613)
[»] scaffold0053 (1 HSPs)
scaffold0053 (159-216)||(29219-29277)
[»] scaffold0263 (1 HSPs)
scaffold0263 (153-198)||(12316-12361)
[»] scaffold0002 (1 HSPs)
scaffold0002 (153-198)||(90942-90987)
[»] scaffold0151 (1 HSPs)
scaffold0151 (37-103)||(20785-20851)
[»] scaffold0388 (1 HSPs)
scaffold0388 (151-196)||(7037-7082)
[»] scaffold0274 (1 HSPs)
scaffold0274 (159-216)||(15893-15950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (157-216)||(82769-82829)
[»] scaffold0024 (1 HSPs)
scaffold0024 (168-196)||(44988-45016)


Alignment Details
Target: chr2 (Bit Score: 419; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 159 - 597
Target Start/End: Complemental strand, 41656748 - 41656310
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgtacgtgggggtgcaagatggagtatgggtacaggtgattctatt 258  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41656748 gggttaatttttcttcataatacaaaactctcctcattgggggaactcaaaaattgtacgtgggggtgcaagatggagtattggtacaggtgattctatt 41656649  T
Q  259 tcactccttaatgaaccttagcttttgaatggtaggcgtattgatggaaatattgaaggcgcacaacttattcagaattttgctgtcaacagtttgatgg 358  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41656648 tctctccttaatgaaccttagcttttgaatggtaggcgtattgatggaaatattgaaggcgcacaacttattcagaattttgctgtcaacagtttgatgg 41656549  T
Q  359 aggaaaatgagaaaaaatggaatgaacctctcattaggcatatctttagtcatgacattgctgctgtcatattaaatatgcctctgattgttcaggtaca 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41656548 aggaaaatgagaaaaaatggaatgaacctctcattaggcatatctttagtcatgacattgctgctgtcatattaaatatgcctctgattgttcaggtaca 41656449  T
Q  459 gcaggataaggtcatttggaaagcggaaaggaacgggaaatattctgtatgtagcgcgtatagactgtgtattgaggaattaattgatacgtctcattta 558  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41656448 gcaggataagctcatttggaaagcggaaaggaacgggaaatattctgtatgtagcgcgtatagactgtgtgttgaggaattaattgatacgtctcattta 41656349  T
Q  559 cggcacccggggtattggtcaggtatttggaggttaaag 597  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41656348 cggcacccggggtattggtcaggtatttggaggttaaag 41656310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 6204643 - 6204506
Alignment:
Q  12 tgtttattttccgataaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggta 111  Q
    ||||||||||||  |||| ||||| |||||  || |||| |||||||  |||||| |||||||||||||||||||  ||||||| | ||||||| |||||    
T  6204643 tgtttattttccagtaaacaaatgattttttaaaaccttttaatctctgccattgattttatatttgccacatgttaaacatctgtgaagtgaattggta 6204544  T
Q  112 taaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||||| | |||||||||||||||||| ||||    
T  6204543 taaatggaggctccttaaatggagcaaagatgctctcg 6204506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 4003397 - 4003461
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4003397 tttggggggttaatttttcttcataatacaaaactctcctcatttgggggaactcaaaaattgta 4003461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 1364802 - 1364866
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  1364802 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 1364866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 11515013 - 11515077
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  11515013 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 11515077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 37194236 - 37194300
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  37194236 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 37194300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 15555454 - 15555394
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||||    
T  15555454 gggggttaatttttcttcataatacaaaacccttctcatttggaggaactaaaaaattgta 15555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 34757574 - 34757638
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||  ||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  34757574 tttggggggttaacctttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 34757638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 39063901 - 39063805
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||| ||||||||| ||||| ||||||||||||||  ||||| |||||||||||  | |||||| ||||   ||||||||||||||||||| ||||    
T  39063901 taatcccaaccattgtttttacatttgccacatgtcatacatcaataaagtgaaaatgaataaattgaggaaacctaaatggagcaaagatggactc 39063805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 43190651 - 43190587
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||| |||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  43190651 tttgaggggttaacttttcttcataatacaaaactctcatcatttggaggaaatcaaaaattgta 43190587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 43572652 - 43572592
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  43572652 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 43572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 3737333 - 3737274
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||||   |||||||| || ||||||||||||||||    
T  3737333 gggggttaatttttcttcataatacaaaatcatcctcatttgaagaactcaaaaattgta 3737274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 6656087 - 6656140
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaact 205  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  6656087 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaact 6656140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 26905772 - 26905837
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcatt-ggaggaactcaaaaattgta 216  Q
    ||||| |||||||| |||||||||| ||||||||| ||||||||| ||||||||| ||||||||||    
T  26905772 ttttgaggggttaacttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgta 26905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 13018590 - 13018526
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  13018590 tttggggagttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaaatgta 13018526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 33361755 - 33361851
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||| || |||| ||| | |||||||||||||  ||||| ||  | |||| |||||||||||||| | ||||||||||||||||| |||||||    
T  33361755 taatctcatcctttgggtttgtttttgccacatgtcatacatcaatgcactgaactggtataaatggagtcatcctaaatggagcaaagttgcactc 33361851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 36030786 - 36030846
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||| |||||||||||||||||    
T  36030786 gggggttcatttttcttcagaatacaaaattctcctcatttgggggaactcaaaaattgta 36030846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 16871538 - 16871612
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||||||   ||||||| |  |||||||| |||||| || ||||||||||||||||||||||| |||||    
T  16871538 tttgccacatgtcagtcatctatgagttgaaatgggataaattgaagcttcctaaatggagcaaagatgaactcg 16871612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 40211986 - 40212036
Alignment:
Q  167 ttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  40211986 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 40212036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 20268028 - 20268101
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||  ||||| ||  | |||| |||||||||||||| | ||||||||||||||||| |||||||    
T  20268028 tttgccacatgtcatacatcgatgcactgaactggtataaatggagtcatcctaaatggagcaaagttgcactc 20268101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 20268195 - 20268122
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||  ||||| ||  | |||| |||||||||||||| | ||||||||||||||||| |||||||    
T  20268195 tttgccacatgtcatacatcgatgcactgaactggtataaatggagtcatcctaaatggagcaaagttgcactc 20268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 5322227 - 5322167
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||  ||||||| |||| |||||||||||| ||||    
T  5322227 gggggttcatttttcttcataatacaaaatcctcctcatttgggggaactcaaaaactgta 5322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 21626092 - 21626156
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||| |||| |||||| |||| |||||    
T  21626092 tttggggggttaacttttcttcataatacaaaaccatcctcatttgggggaactaaaaagttgta 21626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 26051756 - 26051696
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgtac 217  Q
    |||||||||||||||||   |||||||||||||||| ||| |||||| ||| |||||||||    
T  26051756 gggggttaatttttctttgaaatacaaaactctccttatttgaggaattcacaaattgtac 26051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 26599361 - 26599297
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||| |||||||||||||||||||  | ||||||| |||| |||||||| ||||||||    
T  26599361 tttggggggttcatttttcttcataatacaattccctcctcatttgggggaactcacaaattgta 26599297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 34229047 - 34229143
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||| ||||||||||||| ||| |||||||||  |||||||| |  | ||||||  ||||| ||||  || ||||||||||||||||| ||||    
T  34229047 taatctcagccattggttttattttttccacatgtcacacatctatgacttaaaatggggtaaattgaggaatcttaaatggagcaaagatggactc 34229143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 35412310 - 35412278
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaa 185  Q
    |||||||||||||||||||||||||||||||||    
T  35412310 tttggggggttaatttttcttcataatacaaaa 35412278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 9375312 - 9375273
Alignment:
Q  109 gtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  9375312 gtataaatggagccctcctaaatggagcaaagatgcactc 9375273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 10147882 - 10147799
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggag 135  Q
    ||||||||||  ||| |||||| |||||||||||||  ||||| |   | |||||||| ||||||||||||||||||| |||||    
T  10147882 taatctcaacgcttgattttatttttgccacatgtcacacatccaacgaatgaaatgggataaatggaggcttcctaactggag 10147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 10148586 - 10148669
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggag 135  Q
    ||||||||||| ||| |||||| ||| |||||||||  ||||| |   | ||||||||  ||||||||||||||||||||||||    
T  10148586 taatctcaacccttgattttatttttaccacatgtcacacatccaaggaatgaaatggggtaaatggaggcttcctaaatggag 10148669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 11949881 - 11949932
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaa 210  Q
    ||||| ||||||||||||||||||||||||| |||||| | |||||| ||||    
T  11949881 gggtttatttttcttcataatacaaaactcttctcatttggggaactaaaaa 11949932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 21834910 - 21834953
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||| || ||||||||||||||||||| |||||||||||||||    
T  21834910 tttggaggattaatttttcttcataatataaaactctcctcatt 21834953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 41100212 - 41100153
Alignment:
Q  158 ggggttaatttttct-tcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||| |||||| |||||||||||||| ||||||||| | |||||| ||||||||||    
T  41100212 ggggttaacttttctatcataatacaaaaccctcctcatttggggaactaaaaaattgta 41100153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 39181045 - 39181099
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaact 205  Q
    |||||||| || | ||||||||||| |||| ||||||||||||||| ||||||||    
T  39181045 gttttgggaggcttatttttcttcaaaatataaaactctcctcatttgaggaact 39181099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 16625893 - 16625860
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaac 186  Q
    |||||||||||||||||||||||| |||||||||    
T  16625893 tttggggggttaatttttcttcatgatacaaaac 16625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 28539535 - 28539474
Alignment:
Q  155 tggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||| ||||| ||||||||||||| | |||||||||||||| | || ||| ||||||||||    
T  28539535 tggggagttaacttttcttcataatgctaaactctcctcatttgggggactaaaaaattgta 28539474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 39750124 - 39750185
Alignment:
Q  157 gggggttaatttttcttca-taatacaaaactctcctcattggaggaactcaaaaattgtac 217  Q
    ||||||||| ||||||||| ||| ||||||| ||||||||| | |||||| |||||||||||    
T  39750124 gggggttaacttttcttcaataacacaaaaccctcctcatttggggaactaaaaaattgtac 39750185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 41983245 - 41983334
Alignment:
Q  59 aaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||| ||| |||||| || ||||||||||  |||||| | ||| |||| || |||||| ||| |||  ||||||||||||||||||||||    
T  41983245 aacctttgattttattttggccacatgtcacacatctgtgaagggaaaagggataaattgagccttggtaaatggagcaaagatgcactc 41983334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 4854569 - 4854473
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||||  ||||| ||| ||| |||||  ||||||||| | ||||| ||  ||||||||| |  | ||||||||||||||||| ||||    
T  4854569 taatctcaaccattgaatttatttttaccatatgtcacacatctatacattgaaaaggagtaaatggagtcaacataaatggagcaaagatgaactc 4854473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 16813611 - 16813667
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||| ||||||||||||||| |||||||||| ||| ||  |||| ||||||||||    
T  16813611 ggttaacttttcttcataatactaaactctccttatttgaaaaactaaaaaattgta 16813667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 16852890 - 16852946
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||| ||||||||||||||| |||||||||| ||| ||  |||| ||||||||||    
T  16852890 ggttaacttttcttcataatactaaactctccttatttgaaaaactaaaaaattgta 16852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 30523215 - 30523279
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||| ||||||| |||||||||||||||||||  || || ||| | |||||| ||||||||||    
T  30523215 ttttggtgggttaaattttcttcataatacaaaatccttctaatttggggaactaaaaaattgta 30523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 34173832 - 34173896
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaat 116  Q
    ||||||||||||||| ||||| ||||| ||||||||  ||||| ||||| ||||| || ||||||    
T  34173832 taatctcaaccattgtttttacatttgtcacatgtcacacatcaataaaatgaaaaggaataaat 34173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 35550265 - 35550205
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgtac 217  Q
    ||||||||| | ||||||||||||| |||| ||||||||| | |||||| |||| ||||||    
T  35550265 gggggttaactgttcttcataatactaaaccctcctcatttggggaactaaaaagttgtac 35550205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 18947433 - 18947286
Alignment:
Q  1 gcagaggcgtctgtttattttccgataaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaa 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18947433 gcagaggcgtgtgtttattttccggtaaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctatgaa 18947334  T
Q  101 gtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18947333 gtgaaatggtataaatggaggctccctaaatggagcaaagatgcactc 18947286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 18948200 - 18948322
Alignment:
Q  26 taaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttc 125  Q
    |||| ||||| |||||||||||||| |||||||| |||||  |||||||||||||||||||| |||||| || ||||||||||||||||||| ||||| |    
T  18948200 taaagaaatgttttttctaagccttttaatctcagccattaattttatatttgccacatgtcaaacatccatgaagtgaaatggtataaatgaaggctcc 18948299  T
Q  126 ctaaatggagcaaagatgcactc 148  Q
    |||||||||||||||||||||||    
T  18948300 ctaaatggagcaaagatgcactc 18948322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 43702858 - 43702721
Alignment:
Q  12 tgtttattttccgataaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggta 111  Q
    |||||||||| || ||||  |||| ||||||||| | || || |||||  ||||  |||||| |||||||||| |  ||||||||| ||||||| | |||    
T  43702858 tgtttatttttcggtaaaataatgttttttctaaacattttactctcagtcatttattttatttttgccacatatgaaacatctatgaagtgaatttgta 43702759  T
Q  112 taaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||||| | |||||||||||||||||||||||    
T  43702758 taaatggaggctccttaaatggagcaaagatgcactcg 43702721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 42113072 - 42113007
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||| |||||    
T  42113072 gttttggggggttaatttttcttcataatactaaactctcctcatttggggaactaaaaagttgta 42113007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 6746681 - 6746617
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||    
T  6746681 tttggggggttaatttttctttataatacaaaactttcctcatttgggggaactcaaaaattgta 6746617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 15749061 - 15748997
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  15749061 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 15748997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 45940508 - 45940448
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  45940508 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 45940448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 41347187 - 41347090
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||| || ||| ||| ||||||||||||||||  ||||||| ||| | ||  || |||||||||||||| ||||||| |||||||||| |||||    
T  41347187 taatctcagcccttgatttaatatttgccacatgtcagacatctacaaaataaacagggataaatggaggcttgctaaatgaagcaaagatgaactcg 41347090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 43741681 - 43741738
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  43741681 ggttaacttttcttcataatacaaaactctcctcatttgggagaactcaaaaattgta 43741738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 4058251 - 4058187
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctc-attggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||  |||||| |||| ||||||||||    
T  4058251 tttggggggttaacttttcttcataatacaaaaccctcctcgtttggagcaactaaaaaattgta 4058187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 23466109 - 23466045
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattgga-ggaactcaaaaattgta 216  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||| || |||||||| ||||||||    
T  23466109 tttggggggttcatttttctttataatacaaaaccctcctcatttgagggaactcacaaattgta 23466045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24924684 - 24924628
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||  |||||||||    
T  24924684 ggttcatttttcttcataatacaaaaccctcctcatttgaggaacttgaaaattgta 24924628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 38505446 - 38505382
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||  |||||||||    
T  38505446 tttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactataaaattgta 38505382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 10592056 - 10592002
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaatt 213  Q
    ||||||| ||||||||||||||||||| | |||||||| | ||||||||||||||    
T  10592056 gggttaacttttcttcataatacaaaagtatcctcatttggggaactcaaaaatt 10592002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 17884300 - 17884242
Alignment:
Q  156 ggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||||||||||  || || ||| |||||||| ||||||||||    
T  17884300 ggggggttaatttttcttcataatacaaaa--cttcttatttgaggaactaaaaaattgta 17884242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 16805679 - 16805615
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||| |||| ||||||||||||||||||||  || ||| ||||||||||| ||||||||||    
T  16805679 tttgggggtttaacttttcttcataatacaaaaccttcttcatttggaggaactaaaaaattgta 16805615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 25675719 - 25675815
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||||  ||||| ||| |||||||||  ||||||||| | ||||| ||  ||||||||| |  | ||||||||||||||||| ||||    
T  25675719 taatctcaaccattgaatttatttttaccacatgtcacacatctatacattgaaaaggagtaaatggagccaacataaatggagcaaagatgaactc 25675815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 16980552 - 16980477
Alignment:
Q  67 gttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagat 142  Q
    ||||||| |||| || |||||  |||||| |||||||||| ||  ||||| ||||||| |||||||||||||||||    
T  16980552 gttttatttttgacagatgtcacacatctgtaaagtgaaaaggagtaaattgaggcttgctaaatggagcaaagat 16980477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 30302023 - 30301972
Alignment:
Q  165 atttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||| |||| ||||||||||||||| ||| |||| ||||||||||    
T  30302023 atttttcttcaaaatataaaactctcctcatttgagaaactaaaaaattgta 30301972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 42267110 - 42267055
Alignment:
Q  161 gttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||||  ||||| |  ||| ||||||||||||    
T  42267110 gttaatttttcttcataatacaaaactcttatcatttggagaattcaaaaattgta 42267055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 42253942 - 42253988
Alignment:
Q  168 tttcttcataatacaaaactctcctca-ttggaggaactcaaaaatt 213  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  42253942 tttcttcataatacaaaaccctcctcatttggaggaactaaaaaatt 42253988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 46295646 - 46295716
Alignment:
Q  78 gccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||  ||||||||||| ||||| || ||||||||||  ||  |||||||||||||||| |||||    
T  46295646 gccacatgtcacacatctataaaatgaaaagggataaatggagcattgataaatggagcaaagattcactc 46295716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13697262 - 13697315
Alignment:
Q  164 aatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||| ||||||| |||| |||||| |||| |||||    
T  13697262 aatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgta 13697315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 44858198 - 44858149
Alignment:
Q  167 ttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||| || |||| ||||||||||| |||||| ||||||||||    
T  44858198 ttttcttcataaaactaaaccctcctcattgggggaactaaaaaattgta 44858149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 19791667 - 19791723
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||| ||||||||||||||| |||| | ||||||| | |||||| ||||||||||    
T  19791667 ggttaacttttcttcataatactaaacccacctcatttggggaactaaaaaattgta 19791723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 33872219 - 33872159
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| ||||||||||||||| |||| ||||||| |||| |||||| | ||||||||    
T  33872219 gggggttaacttttcttcataatactaaaccctcctcatttgggggaactaacaaattgta 33872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 38233840 - 38233784
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||| ||| |||||||| || |||||| |||||||| |||| |||||    
T  38233840 ggttaatttttcttgatattacaaaacccttctcatttgaggaactaaaaagttgta 38233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 42252865 - 42252829
Alignment:
Q  112 taaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  42252865 taaatggaggcttcataaatggagcaaagatgaactc 42252829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 46461984 - 46461865
Alignment:
Q  26 taaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttc 125  Q
    |||| ||||||||||||||| | || |||||||| |||||| |||||||||||||||||||| |||||| || || ||||||||||||||||||||||      
T  46461984 taaacaaatgctttttctaaacttt-taatctcagccattgattttatatttgccacatgtcaaacatccatgaaatgaaatggtataaatggaggctct 46461886  T
Q  126 ctaaatggagcaaagatgcac 146  Q
    || ||||||||||||||||||    
T  46461885 cttaatggagcaaagatgcac 46461865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 38639556 - 38639622
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  38639556 gttttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 38639622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 34936802 - 34936714
Alignment:
Q  61 ccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    ||||||||||||| |||||||||||||  | |||||| |||||||| || |||||||||||  |  |||||||||||||||||||||||    
T  34936802 ccattggttttatttttgccacatgtcacaaatctatgaagtgaaaagggataaatggaggtatggtaaatggagcaaagatgcactcg 34936714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 50948174 - 50948239
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| ||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  50948174 ttttggagggttaacttttcttcataatacaaaaccctcctcagttggaggaactaaaaaattgta 50948239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 1340006 - 1339946
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  1340006 gggggttaatttttcttcataatacataactctcatcatttgaaggaactcaaaaattgta 1339946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 33944748 - 33944688
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  33944748 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 33944688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 53664711 - 53664647
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||| |||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  53664711 tttgaggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 53664647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 55444550 - 55444649
Alignment:
Q  49 ttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||| || || ||| ||||| ||||||||||||||  ||||| ||||||||||| || ||||||||||  ||| |||||| |||||||||| ||||    
T  55444550 ttctaatcccagcccttgtttttacatttgccacatgtcacacatcaataaagtgaaaagggataaatggagcattcttaaatgaagcaaagatggactc 55444649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 517738 - 517685
Alignment:
Q  158 ggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaa 210  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  517738 ggggttaatttttcttcataatacaaaaccctcctcatttgggggaactcaaaa 517685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 30995839 - 30995896
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaa 210  Q
    |||||| |||||||||||||||||||||||||||||| |||||| | |||||| ||||    
T  30995839 tttgggaggttaatttttcttcataatacaaaactctactcatttggggaactaaaaa 30995896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 1133033 - 1132973
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| ||||| |||||||||||||||||||||||| || | |||||||||||||||||    
T  1133033 gggggttcattttacttcataatacaaaactctcctcattttggggaactcaaaaattgta 1132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 3537177 - 3537241
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||| |||||||||||||||||||| ||||||| |||| |||||| ||||||||||    
T  3537177 tttgggaggttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgta 3537241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 29623213 - 29623269
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||||||| ||||||||| | | ||||||||| |||||    
T  29623213 ggttaatttttcttcataatacaaaaccctcctcatttgggaaactcaaaagttgta 29623269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 35283056 - 35283120
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||| |||| ||||| ||||||| |||| |||||| ||||||||||    
T  35283056 tttggggggttaatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgta 35283120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 37674252 - 37674188
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| || |||||||| ||||||||||    
T  37674252 tttggggggttaacttttcttcatgatacaaaaccctcctcattttgaggaactaaaaaattgta 37674188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 40118996 - 40118932
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||| | ||||||| ||||||| |||| |||||| ||||||||||    
T  40118996 tttggggggttaatttttcttcattaaacaaaaccctcctcatttgggggaactaaaaaattgta 40118932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 40613792 - 40613868
Alignment:
Q  72 atatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||| |||||||||||  ||||||| ||| ||||  || |||||||||||||| |||||||||||||||||| ||||    
T  40613792 atatgtgccacatgtcagacatctacaaaatgaacagggataaatggaggcttgctaaatggagcaaagatgaactc 40613868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 25754209 - 25754150
Alignment:
Q  158 ggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| | |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  25754209 ggggttgacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 25754150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 27197225 - 27197279
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaa 211  Q
    ||||||||| | |||||||||||||||||| ||||||||| |||||||| |||||    
T  27197225 gggggttaactattcttcataatacaaaaccctcctcatttgaggaactaaaaaa 27197279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 55439960 - 55439870
Alignment:
Q  53 aatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatg 143  Q
    |||||||||| ||| || |||| |||||| |||||  ||||| ||||||||||| || ||||||| ||  ||| |||||||||||||||||    
T  55439960 aatctcaacccttgattgtatacttgccatatgtcacacatcaataaagtgaaaagggataaatgaagcattcttaaatggagcaaagatg 55439870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 22225341 - 22225378
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22225341 gggttaatttttcttcataatactaaactctcctcatt 22225378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 20918374 - 20918278
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||| || |||||| ||||||||||||||   ||||||| | |||||| || | |||||||| |||| |||||| || ||||||| ||||    
T  20918374 taatctcaacccttcgttttaaatttgccacatgtcagtcatctatgaggtgaaaagggaaaaatggagccttcttaaatgaagtaaagatggactc 20918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 20927336 - 20927240
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||| || |||||| ||||||||||||||   ||||||| | |||||| || | |||||||| |||| |||||| || ||||||| ||||    
T  20927336 taatctcaacccttcgttttaaatttgccacatgtcagtcatctatgaggtgaaaagggaaaaatggagccttcttaaatgaagtaaagatggactc 20927240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 21777744 - 21777684
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||  ||| ||||||||||||    
T  21777744 gggggttcatttttcttcataatacaaaactctcatcatttgggagaaatcaaaaattgta 21777684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 24588383 - 24588331
Alignment:
Q  165 atttttcttcataatacaaaactctcctcatt-ggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  24588383 atttttcttcataatacaaaatccccctcatttggaggaactcaaaaattgta 24588331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 32858803 - 32858863
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||| ||||  ||||||| |||| |||||||||||||||||    
T  32858803 gggggttcatttttcttcataatataaaatcctcctcatttgggggaactcaaaaattgta 32858863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 5939895 - 5939840
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaact 205  Q
    ||||||||||||||| |||||||||||||||||||   |||||| |||||||||||    
T  5939895 gttttggggggttaacttttcttcataatacaaaatcttcctcatttggaggaact 5939840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 33909061 - 33909018
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||| |||| |||||||||||||||||||| |||||||||    
T  33909061 tttgggggattaacttttcttcataatacaaaaccctcctcatt 33909018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 49183665 - 49183728
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||||||||||| || | ||||||||| |  ||||| ||||||||||    
T  49183665 tttggggggttaacttttcttcataatactaatccctcctcatttggagaactaaaaaattgta 49183728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 54089553 - 54089502
Alignment:
Q  165 atttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||| ||||||||||||||| |||||| ||| |||| ||||||||||    
T  54089553 atttttctttataatacaaaactcttctcatttgagaaactaaaaaattgta 54089502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 45571053 - 45570991
Alignment:
Q  155 tggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| ||||||||||||||||  |||| ||||||| |||| |||||| ||||||||||    
T  45571053 tggggggttcatttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgta 45570991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 46462682 - 46462719
Alignment:
Q  112 taaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||| || ||||||||||||||||||||||||    
T  46462682 taaatggagggttgctaaatggagcaaagatgcactcg 46462719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 48908982 - 48908925
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaatt 213  Q
    ||||||||| |||||||||||||||||||| ||| | | ||||||||||| |||||||    
T  48908982 gggggttaacttttcttcataatacaaaaccctcataatttggaggaactaaaaaatt 48908925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 37886750 - 37886654
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||| ||||| |||  |||| ||||||||||||||  ||||| ||||||||||| || |||||| ||||   |||||||| |||||| ||| ||||    
T  37886750 taatcccaacccttgactttacatttgccacatgtcacacatcaataaagtgaaaaggaataaattgaggaaacctaaatgaagcaaaaatggactc 37886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 49855916 - 49855856
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||   | |||| || |||||||||||||||||||    
T  49855916 gggggttcatttttcttcataatacaaaataattctcatttagaggaactcaaaaattgta 49855856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 54917740 - 54917796
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaa 209  Q
    ||||||||||| |||||||||| ||||||||||  ||||| ||| | ||||||||||    
T  54917740 tttggggggtttatttttcttcgtaatacaaaatcctcctaatttggggaactcaaa 54917796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29984746 - 29984895
Alignment:
Q  1 gcagaggcgtctgtttattttccgataaataaat-gctttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataa 99  Q
    |||||||||| |||||||||||| ||||| || |   |||||| ||||||| |||||||| ||||||||||| |||||  |||||||| |||||| || |    
T  29984746 gcagaggcgtgtgtttattttccaataaacaagtatttttttcgaagccttttaatctcagccattggttttttatttttcacatgtcaaacatccatga 29984845  T
Q  100 agtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||| |||||||||||||||||  ||||| | ||||||||||||||||    
T  29984846 agtgaattggtataaatggaggctctctaaaggaagcaaagatgcactcg 29984895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 35683582 - 35683521
Alignment:
Q  156 ggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  35683582 ggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 35683521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 10843017 - 10843077
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  10843017 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 10843077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 19778734 - 19778822
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaag 140  Q
    ||||||||||| ||  ||||| |||||||||||||| |||||| ||||||| ||| || ||||| ||||||||| ||||||||| ||||    
T  19778734 taatctcaacccttatttttacatttgccacatgtcaaacatcaataaagtaaaaaggaataaacggaggcttcttaaatggaggaaag 19778822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 39649540 - 39649604
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  39649540 tttggggggttaacttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgta 39649604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 43496968 - 43496909
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||||| ||||||||||||||| |||||| | |||||| ||||||||||    
T  43496968 gggggttaatttttcttaataatacaaaactctgctcatttggggaacttaaaaattgta 43496909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 43379443 - 43379553
Alignment:
Q  38 ttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagca 137  Q
    ||||| || |||| ||||| ||||| ||| |||||| |||||||||||||  |||||||  |  || ||||| |||||||||| |||| |||||||||||    
T  43379443 ttttccaaaccttttaatcccaacccttgcttttatttttgccacatgtcacacatctaagagctggaatgggataaatggagccttcataaatggagca 43379542  T
Q  138 aagatgcactc 148  Q
    |||||| ||||    
T  43379543 aagatgaactc 43379553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 2679978 - 2679914
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||| ||| ||||||||||||||    
T  2679978 tttggggggttaacttttctttataatacaaaactctcatcatttgaagggactcaaaaattgta 2679914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 5772828 - 5772768
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| | ||||||||||    
T  5772828 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaattaaaaaattgta 5772768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 5836854 - 5836921
Alignment:
Q  151 gttttggggg-gttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||| |||| |||||| ||||||||||    
T  5836854 gttttgggggagttcatttttcttcataatacaaaactcttctcatttgggggaacttaaaaattgta 5836921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 22103490 - 22103548
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||||| ||| ||||| | |||||| ||||||||||    
T  22103490 gggggttaatttttcttcataatacaaaaccctcatcattcggggaact-aaaaattgta 22103548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 33529809 - 33529735
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||||||   ||||||| |  |||||||| |||||| || ||||||||||||||||||||||| |||||    
T  33529809 tttgccacatgtcagtcatctatgagttgaaatgggataaattgaagcttcctaaatggagcaaagatgaactcg 33529735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 38568479 - 38568418
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaatt 213  Q
    ||||||||||||| ||||||||||||||| |||| ||||||| |||| |||||| |||||||    
T  38568479 tttggggggttaacttttcttcataatactaaaccctcctcatttgggggaactaaaaaatt 38568418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 3635591 - 3635495
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||| || |||||| ||||||||||||||   ||||||| |  ||||| || | ||||| || |||| ||||||||||||||||| ||||    
T  3635591 taatctcaacctttcgttttaaatttgccacatgtcagtcatctatgagatgaaaagggaaaaatgaagtcttcttaaatggagcaaagatggactc 3635495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 6491157 - 6491217
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||   |||||| |||| |||||||||||||||||    
T  6491157 gggggttcatttttcttcataatacaaaatcttcctcatttgggggaactcaaaaattgta 6491217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 10955802 - 10955738
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||| |||||||||||||| ||||||| |||| |||||| ||| ||||||    
T  10955802 tttggggggttaacttttcatcataatacaaaaccctcctcatttgggggaactaaaagattgta 10955738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 15974309 - 15974372
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggag-gaactcaaaaattgt 215  Q
    ||||| ||||||| ||||||||||||||| | |||||||||||| ||| ||||| |||||||||    
T  15974309 tttggagggttaacttttcttcataatactatactctcctcatttgagagaactaaaaaattgt 15974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 19389925 - 19389866
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||| |||| ||||||||||||||||  ||||||||| | |||||| ||||||||||    
T  19389925 gggggttcatttatcttcataatacaaaatcctcctcatttggggaactaaaaaattgta 19389866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 29022600 - 29022651
Alignment:
Q  165 atttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||| |||| |||||||||||||||  ||||||| ||||||||||    
T  29022600 atttttcttcaaaatataaaactctcctcatttaaggaactaaaaaattgta 29022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 3925891 - 3925829
Alignment:
Q  154 ttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||| ||||||||||||||| ||| | || |||||||||| | |||||| ||||||||||    
T  3925891 ttgggggattaatttttcttcatgatatagaattctcctcatttggggaactaaaaaattgta 3925829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 13569336 - 13569385
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaact 205  Q
    ||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  13569336 gggggttaacttttcttcataatacaaaattttcctcatttggaggaact 13569385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 29709491 - 29709556
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||| |||||| | |||||| |||||||||||| |||||||| ||| ||||||| ||||||||||    
T  29709491 ttttgaggggttcacttttctccataatacaaaattctcctcatttgaaggaactaaaaaattgta 29709556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 10437955 - 10438019
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||| |||||||||||  ||||||| || |||||||| |||| |||||    
T  10437955 tttggggggttaacttttctttataatacaaaatcctcctcatttagaggaactaaaaagttgta 10438019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 37840039 - 37839967
Alignment:
Q  71 tatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatg 143  Q
    |||| ||||||||||||  || || ||||||||||| || ||||||| ||  ||| |||||||||||||||||    
T  37840039 tatacttgccacatgtcacacgtcaataaagtgaaaagggataaatgaagcgttcttaaatggagcaaagatg 37839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 93620 - 93554
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  93620 gttttggggggttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgta 93554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 18065806 - 18065719
Alignment:
Q  61 ccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||||| |||||||||||||  | ||||||||||| ||| || ||||||||||| ||  ||||||||||||||||||||||    
T  18065806 ccattggttttatttttgccacatgtcatatatctataaagtaaaaagggataaatggaggtttggtaaatggagcaaagatgcactc 18065719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 1567250 - 1567314
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  1567250 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 1567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 32719484 - 32719424
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  32719484 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 32719424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 33590440 - 33590376
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| | ||| || ||||||||||    
T  33590440 ttttggggggttaacttttcttcataatacaaaaccctcctcatttggggagctaaaaaattgta 33590376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 11180271 - 11180207
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||| || |||||||    
T  11180271 tttggggggttaacttttctccataatacaaaaccctcctcatttggaggaactaaagaattgta 11180207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 20820642 - 20820578
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctc-attggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||||||||||| |||||||||||  |||| |||||| ||||||||||    
T  20820642 tttggggggttaacttttcttcataatactaaactctcctcgtttgggggaactaaaaaattgta 20820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 22788620 - 22788566
Alignment:
Q  162 ttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||| ||||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  22788620 ttaacttttcttgataatacaaaactcttctcatttgaggaactaaaaaattgta 22788566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 32221970 - 32222036
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||||| ||||||| ||||||  |||||||||||| ||||||||||| ||||||||||    
T  32221970 gttttgaggggttaacttttctttataatatcaaactctcctcatttggaggaactaaaaaattgta 32222036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 4089496 - 4089445
Alignment:
Q  165 atttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||| |||| ||||||||||||||| |||||||| | ||||||||    
T  4089496 atttttcttcaaaatataaaactctcctcatttgaggaactaagaaattgta 4089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 28551997 - 28551954
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  28551997 tttgaggggttagcttttcttcataatacaaaactctcctcatt 28551954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 33212301 - 33212364
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||| | |||||| |||| |||||    
T  33212301 tttgaggggttaatttgtcttcataatacaacactctgctcatttggggaactaaaaagttgta 33212364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 3163578 - 3163488
Alignment:
Q  59 aaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||| |||||||||| |||| ||||||||  ||||||||||| ||||| ||  |||||||||| |  ||||||||||  ||| ||||||||    
T  3163578 aacccttggttttatttttgacacatgtcgcacatctataaactgaaaaggggtaaatggaggatagctaaatggagtgaagttgcactcg 3163488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 2502480 - 2502436
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||||||| ||||||||| |||||| ||||||||| |||||    
T  2502480 ttttggggggtttatttttctttataatataaaactctcttcatt 2502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 24379618 - 24379670
Alignment:
Q  165 atttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||| |||||||||| ||||||| || ||| |||||||||||||||    
T  24379618 atttttcttcaaaatacaaaaccctcctcatttagagaaactcaaaaattgta 24379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 26713832 - 26713896
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactc-tcctcattggaggaactcaaaaattgta 216  Q
    |||| ||||||||||||||||||| |||  ||| || |||||||| | |||||||||||||||||    
T  26713832 tttgaggggttaatttttcttcatgataagaaaatcctcctcatttggggaactcaaaaattgta 26713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 39310492 - 39310395
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||| ||||||||||||| ||| |||||||||  ||||||||||  |||||||| |||||| ||||  || ||||||||||||||||| |||||    
T  39310492 taatctcagccattggttttattttttccacatgtcatacatctataacttgaaatgggataaattgaggaatcttaaatggagcaaagatggactcg 39310395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 12708946 - 12708882
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  12708946 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 12708882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 29114345 - 29114281
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  29114345 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 29114281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 30198883 - 30198819
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  30198883 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 30198819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 8828311 - 8828249
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaatt 213  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||| |||||||| |||||||    
T  8828311 gttttggggagtttaattttcttcataatacaaaactctcctcatttgaggaactgaaaaatt 8828249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 46177041 - 46176975
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||| |||||    
T  46177041 gttttggggggttaatttttcttaataatacaaaaccctcctcatttggaggaactaaaaagttgta 46176975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 24484879 - 24484788
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatg 143  Q
    |||||||| ||||||||||||| ||| |||||||||  ||||||||||  |||||| | |||||| ||||  || |||||||||||||||||    
T  24484879 taatctcagccattggttttattttttccacatgtcacacatctataacttgaaataggataaattgaggaatcttaaatggagcaaagatg 24484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 28175576 - 28175512
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  28175576 tttgggaggttaacttttcttcataatacaaaatcctcctcatttggaggaactaaaaaattgta 28175512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 35959165 - 35959229
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||| |||||| |||| |||||    
T  35959165 tttgggggtttaatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgta 35959229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 38136946 - 38136882
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||| ||||||||||||||| || |||| ||||||||||| ||||||||||    
T  38136946 tttggggggttaactttttttcataatacaaaacccttctcatttggaggaactaaaaaattgta 38136882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 16318591 - 16318650
Alignment:
Q  158 ggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||| ||||||||||    
T  16318591 ggggttaacttttcttcatattacaaaaccctcctcatttggaggaactaaaaaattgta 16318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 44076573 - 44076636
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||| |||||||||||||||||||||||||||| |||| |   |||||| ||||||||||    
T  44076573 tttgggggattaatttttcttcataatacaaaactcttctcacttagggaactaaaaaattgta 44076636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 52636730 - 52636773
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  52636730 tttggggggttaatttttcttcataatataaaaccctcctcatt 52636773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 368043 - 368081
Alignment:
Q  158 ggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  368043 ggggttaatttttcttcataatacaaaaccctcctcatt 368081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 45823530 - 45823588
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||||||||| |||| | |||| ||||||||||    
T  45823530 gggttaacttttcttcataatacaaaactctcctcatttggggaaacttaaaaattgta 45823588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 54205811 - 54205872
Alignment:
Q  156 ggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||| |||||||||||||| ||||||  ||||||| |||| |||||||||||||||||    
T  54205811 ggggggttcatttttcttcataaaacaaaatcctcctcatttgggggaactcaaaaattgta 54205872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 516045 - 516097
Alignment:
Q  165 atttttcttcataatacaaaactctcctcatt-ggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  516045 atttttcttcataatacaaaattctcctcattcagagaaactcaaaaattgta 516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 31414820 - 31414916
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||| ||  ||||| ||||||||||||||  | ||| ||||||||||| || |||||| ||||   | ||||||||||||||||| ||||    
T  31414820 taatctcaacccttctttttacatttgccacatgtcacatatcaataaagtgaaaaggaataaattgaggaaacttaaatggagcaaagatggactc 31414916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 8827923 - 8827888
Alignment:
Q  161 gttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8827923 gttaattattcttcataatacaaaactctcctcatt 8827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 25843818 - 25843877
Alignment:
Q  158 ggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||| ||||||||||||||||| |||| |||| | |||||||||| ||||    
T  25843818 ggggttaatttttcatcataatacaaaactcttctcatttggggaaactcaaaaagtgta 25843877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 29079298 - 29079349
Alignment:
Q  97 taaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||| ||  ||||| ||||||| |||||||||||||||||||||||    
T  29079298 taaagtgaaaaggagtaaattgaggcttgctaaatggagcaaagatgcactc 29079349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 32866833 - 32866779
Alignment:
Q  161 gttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| ||||||||||    
T  32866833 gttaatttttcttcataatacaaagttctcctcatttg-ggaactaaaaaattgta 32866779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 9483662 - 9483732
Alignment:
Q  78 gccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||||  |||||||| |||||||| || |||||||||  |||   |||||||||||||||||||||    
T  9483662 gccacatgtcacacatctatgaagtgaaaagggataaatggaacctttgcaaatggagcaaagatgcactc 9483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 21081317 - 21081383
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| ||||| |||||||||||||| ||||||| ||||||| |||| | |||| ||||||||||    
T  21081317 gttttggagggttcatttttcttcataaaacaaaaccctcctcatttggggtaacttaaaaattgta 21081383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 47063660 - 47063725
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||| | ||||||||| | |||| ||||| ||||||||| | |||||| ||||||||||    
T  47063660 gttttggggggcttatttttctttaaaatataaaaccctcctcatttggggaactaaaaaattgta 47063725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 21443004 - 21443052
Alignment:
Q  165 atttttcttcataatacaaaactctcctcattggaggaactcaaaaatt 213  Q
    ||||||||||| |||| ||||| ||||||||| |||||||| |||||||    
T  21443004 atttttcttcaaaatataaaaccctcctcatttgaggaactaaaaaatt 21443052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 27143145 - 27143189
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||||||| ||||||||| |||||| ||||||||| |||||    
T  27143145 ttttggggggtttatttttctttataatataaaactctcttcatt 27143189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 27485350 - 27485306
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggagg 201  Q
    ||||||| |||||||||||||||||||||  ||||||||| ||||    
T  27485350 gggggttcatttttcttcataatacaaaatcctcctcatttgagg 27485306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 42650605 - 42650669
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||| || ||||||||||| |||| ||||| ||||||| |||| |||||| ||||||||||    
T  42650605 tttgggggttttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgta 42650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 50494756 - 50494696
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggagg-aactcaaaaattgta 216  Q
    ||||||||| |||||||||||| ||||||| |||||||||  ||| |||| ||||||||||    
T  50494756 gggggttaagttttcttcataacacaaaaccctcctcattcaaggaaactaaaaaattgta 50494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 52068246 - 52068185
Alignment:
Q  156 ggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  52068246 ggggggttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgta 52068185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 5584474 - 5584538
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  5584474 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 5584538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 17760587 - 17760523
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  17760587 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 17760523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 69701 - 69766
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||||| ||||||||||||||| |||| |||||| || |||||||| ||||||||||    
T  69701 gttttggggggttaacttttcttcataatactaaaccctcctcgtttgaggaactaaaaaattgta 69766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 29092059 - 29092119
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  29092059 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 29092119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 34154440 - 34154376
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||| ||||||||||| ||||||||||    
T  34154440 tttggggggttaacttttcttcataatacaaaaccttcctcatttggaggaactaaaaaattgta 34154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 36269712 - 36269776
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||| |||||| ||||||||||    
T  36269712 tttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgta 36269776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 37649728 - 37649664
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| ||||| ||||||| |||||||||||| ||||||| ||||||||||| ||||||||||    
T  37649728 tttggggtgttaacttttctttataatacaaaaccctcctcatttggaggaactaaaaaattgta 37649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 41817407 - 41817347
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  41817407 gggggttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgta 41817347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 18526899 - 18526972
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||   ||||||| | |||||| || ||||||| ||||||||||||||||||||| ||| ||||    
T  18526899 tttgccacatgtcagtcatctatgaggtgaaaagggataaatgaaggcttcctaaatggagcaaatatggactc 18526972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 46001542 - 46001599
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  46001542 ggttaacttttcttcataatataaaaccctcctcatttggaggaactaaaaaattgta 46001599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 52073548 - 52073495
Alignment:
Q  165 atttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgtac 217  Q
    ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||    
T  52073548 atttttcttcataattcaaaaccctcctcatttgggggaactcaaaaattgtac 52073495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 21071279 - 21071347
Alignment:
Q  80 cacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||||||  ||||||||||| ||||| || ||||||||||  || ||||||||||| |||||||||||    
T  21071279 cacatgtcgcacatctataaaatgaaaagggataaatggagaattgctaaatggagcgaagatgcactc 21071347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 27255178 - 27255242
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||| |||||||||||||||||||| ||||||| ||| ||||||| ||||| ||||    
T  27255178 tttgggaggttaacttttcttcataatacaaaaccctcctcatttgaaggaactaaaaaaatgta 27255242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 28848889 - 28848837
Alignment:
Q  165 atttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||| ||||||| ||||||| |||| |||||||||||||||||    
T  28848889 atttttcttcataacacaaaaccctcctcatttgggggaactcaaaaattgta 28848837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 33324603 - 33324651
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggagg 201  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||| ||||    
T  33324603 tttggggggttaacttttcttcataatactaaaccctcctcatttgagg 33324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 32672583 - 32672646
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||||||||||| |||||||||| |||| |||| |||||| || ||| |||| ||||||||||    
T  32672583 tttggggggttaacttttcttcatcatactaaaccctcctcgtttgagaaactaaaaaattgta 32672646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 41432877 - 41432814
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||| || |||||||||||||||| ||||| ||||||||| | || |||||||| |||||    
T  41432877 tttgggggtttcatttttcttcataatataaaaccctcctcatttgggggactcaaaatttgta 41432814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 42333622 - 42333657
Alignment:
Q  161 gttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||||||||||||||||||||| |||||||||    
T  42333622 gttaatttttcttcataatacaaaaccctcctcatt 42333657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 50587016 - 50587059
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||||||||| |||||||||||||||||||||  |||||||||    
T  50587016 tttggggggttcatttttcttcataatacaaaatcctcctcatt 50587059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 18909158 - 18909116
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctc 193  Q
    |||||||  ||||||||||| ||||||||||||||||||||||    
T  18909158 gttttggaaggttaattttttttcataatacaaaactctcctc 18909116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 41428099 - 41428045
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaatt 213  Q
    |||||||||||||||||||||  || | |||||||||| | ||||||||||||||    
T  41428099 gggttaatttttcttcataatgaaagaatctcctcatttggggaactcaaaaatt 41428045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 15668275 - 15668348
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||||||||  ||||| | | ||||||| ||  ||||||||| |||| ||||||||||||||||| ||||    
T  15668275 tttgccacatgtcacacatccaaacagtgaaaaggagtaaatggagccttcttaaatggagcaaagatggactc 15668348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 23412058 - 23412001
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||| ||||||||||||||| |||||  ||||||| ||||||||||| ||||||||||    
T  23412058 ggttcatttttcttcataattcaaaatcctcctcatttggaggaactaaaaaattgta 23412001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 37955142 - 37955183
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcct 192  Q
    ||||||| | ||||||||||||||||||||||||| ||||||    
T  37955142 gttttggagtgttaatttttcttcataatacaaaattctcct 37955183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 50226008 - 50226073
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||| ||||||||||||||  |||| || |||| ||||| ||||| ||||||||||    
T  50226008 ttttggggggttaacttttcttcataatattaaacccttctcatttggaagaactaaaaaattgta 50226073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 10449780 - 10449832
Alignment:
Q  161 gttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaatt 213  Q
    ||||| |||||||||||||||||||||||| ||||| |   ||||||||||||    
T  10449780 gttaacttttcttcataatacaaaactctcttcatttggaaaactcaaaaatt 10449832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 27102936 - 27102872
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||| |||||||||||||||||||||  ||| ||| |||| | |||||||||||||||    
T  27102936 tttgggaggttcatttttcttcataatacaaaatgctcttcatttggggaaactcaaaaattgta 27102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 33579219 - 33579267
Alignment:
Q  168 tttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||| |||||||||||| ||||||||| | ||||||||||| |||||    
T  33579219 tttctttataatacaaaaccctcctcatttggggaactcaaaagttgta 33579267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 43036424 - 43036361
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||||||||||||| |||| ||||| ||||||| ||||  ||||| ||||||||||    
T  43036424 tttggggggttaatttttcttca-aatataaaaccctcctcatttgggagaactaaaaaattgta 43036361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 50097596 - 50097660
Alignment:
Q  152 ttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||| ||||||||||| |||| |||||  |||| ||| |||||||| |||| |||||    
T  50097596 ttttggggggtttatttttcttcaaaatataaaaccatccttatttgaggaactaaaaagttgta 50097660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 2131 - 2071
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  2131 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactgaaaaattgta 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 26348 - 26412
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  26348 tttggggggataacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 26412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 23932666 - 23932606
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  23932666 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgta 23932606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 39309664 - 39309731
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagat 142  Q
    ||||||||||||| | ||||||| | |||||| || ||||||||||| ||||||||||||||||||||    
T  39309664 tttgccacatgtcaatcatctatgaggtgaaaagggataaatggaggtttcctaaatggagcaaagat 39309731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 2581259 - 2581193
Alignment:
Q  16 tattttccgataaataaatgctttttctaagccttctaatctcaaccattggttttatatttgccac 82  Q
    ||||||||  |||| ||||||||||| ||||| || ||||||||||||||||||| |||||||||||    
T  2581259 tattttccagtaaacaaatgctttttttaagctttttaatctcaaccattggtttcatatttgccac 2581193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 39308741 - 39308667
Alignment:
Q  75 tttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactcg 149  Q
    |||||||||||||   ||||||| | |||||| || ||||||||||| ||||||||||||||||||||| |||||    
T  39308741 tttgccacatgtcagtcatctatgaggtgaaaagggataaatggaggtttcctaaatggagcaaagatggactcg 39308667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 43235489 - 43235431
Alignment:
Q  90 acatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||| |||||||| || ||||||||||||||  ||||||||||||||||||||||    
T  43235489 acatctatgaagtgaaaagggataaatggaggcttggtaaatggagcaaagatgcactc 43235431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 21173966 - 21173909
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaatt 213  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  21173966 gggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaatt 21173909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 43007685 - 43007730
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  43007685 gttttggggggttaacttttctttataatacaaaactctcctcatt 43007730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 4166754 - 4166690
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcatt-ggaggaactcaaaaattgta 216  Q
    |||||||||| |||||||||||||||||||||||||| |||||| | ||||||| |||| |||||    
T  4166754 tttggggggtaaatttttcttcataatacaaaactcttctcattcgaaggaactaaaaagttgta 4166690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 43235993 - 43236048
Alignment:
Q  92 atctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcact 147  Q
    ||||||||||||||| |  ||||||||||||||  |||||||||||||||||||||    
T  43235993 atctataaagtgaaaagagataaatggaggcttggtaaatggagcaaagatgcact 43236048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 13227683 - 13227729
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattggaggaa 203  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  13227683 gggggttaacttttcttcattatacaaaactctcctcatttgaggaa 13227729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 43438407 - 43438342
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    ||||| || |||| ||||||||| ||||||||||| ||| | |||| |||||||||||||||||||    
T  43438407 gtttttggaggttcatttttctttataatacaaaattcttcccatttgaggaactcaaaaattgta 43438342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 79725 - 79661
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||  ||||||||||||||| |||| ||||||| |||| |||||| ||||||||||    
T  79725 tttggggggttacgttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgta 79661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 6461976 - 6461880
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||| ||||||||| |||||| |||||||||||||  ||||||||||  |||||||  |||||| |||    || |||||||||||||||| ||||    
T  6461976 taatcacaaccattgattttatttttgccacatgtcatacatctataacttgaaatgaaataaattgagcaaaccgaaatggagcaaagatgaactc 6461880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 26772754 - 26772690
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||| |||||||||||||||||||| ||| ||| ||| ||||||| ||||||||||    
T  26772754 tttgggaggttaacttttcttcataatacaaaaccctcatcatttgaaggaactaaaaaattgta 26772690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 39193900 - 39193964
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||||||||| ||||| ||| ||| |||| |||||| |||| |||||    
T  39193900 tttggggggttaatttttcttcataatataaaaccctcttcatttgggggaactaaaaagttgta 39193964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 31149882 - 31149945
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||| ||||||||||   |||||||| | |||||| |||| |||||    
T  31149882 tttggggggttaatttttcttcctaatacaaaatcatcctcatttggggaactaaaaagttgta 31149945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 13258470 - 13258500
Alignment:
Q  155 tggggggttaatttttcttcataatacaaaa 185  Q
    |||||||||||||||||||||||||||||||    
T  13258470 tggggggttaatttttcttcataatacaaaa 13258500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 22330673 - 22330723
Alignment:
Q  166 tttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||| ||||||| ||  ||||||| ||||||||||    
T  22330673 tttttcttcataatacaaaattctcctctttttaggaactaaaaaattgta 22330723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 5940760 - 5940789
Alignment:
Q  111 ataaatggaggcttcctaaatggagcaaag 140  Q
    ||||||||||||||||||||||||||||||    
T  5940760 ataaatggaggcttcctaaatggagcaaag 5940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 4873371 - 4873323
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattggagg 201  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||| ||||    
T  4873371 tttggggggttaacttttcttcataatatgaaaccctcctcatttgagg 4873323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 12506308 - 12506244
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||||||| ||||||||| ||||  |||| ||||||| |||| |||||| ||||||||||    
T  12506308 tttggggggttaacttttcttcaaaatattaaaccctcctcatttgggggaactaaaaaattgta 12506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 40985174 - 40985122
Alignment:
Q  165 atttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| ||||||||||||||  ||||||| |||| |||||||||||||||||    
T  40985174 atttttattcataatacaaaatcctcctcatttgggggaactcaaaaattgta 40985122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 41889435 - 41889323
Alignment:
Q  37 tttttctaagccttctaatctcaaccattggtttt-atatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggag 135  Q
    |||||| || |||| |||||||| || ||| |||| || |||||||||||||  ||||| | | ||||||| ||  ||||||||| |||| ||||||||     
T  41889435 tttttccaacccttttaatctcagcccttgattttcatttttgccacatgtcacacatccaaacagtgaaaaggagtaaatggagccttcttaaatggaa 41889336  T
Q  136 caaagatgcactc 148  Q
    |||||||| ||||    
T  41889335 caaagatggactc 41889323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 42578805 - 42578709
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    |||||||| |||||| |||||| |||||||||||||  |||||||| |  ||||||||  ||||| |||    | ||||||||||||||||| ||||    
T  42578805 taatctcagccattgattttatttttgccacatgtcatacatctatgacttgaaatggggtaaattgagcaaacataaatggagcaaagatggactc 42578709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 44251663 - 44251611
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaa 211  Q
    ||||||| ||||||||||||||| ||| ||| |||||| |||||||| |||||    
T  44251663 gggttaacttttcttcataatactaaattcttctcatttgaggaactaaaaaa 44251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 801 - 740
Alignment:
Q  154 ttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgt 215  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| |||||||| ||| |||||    
T  801 ttggagggttaacttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgt 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 3678 - 3617
Alignment:
Q  154 ttggggggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgt 215  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| |||||||| ||| |||||    
T  3678 ttggagggttaacttttcttcataatacaaaaccctcctcatttgaggaactaaaacattgt 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 6862 - 6805
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  6862 ggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgta 6805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 7845 - 7788
Alignment:
Q  160 ggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  7845 ggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgta 7788  T

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Target: scaffold0248 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 304 - 244
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  304 gggggttaacttttcttcataatacaaaaccctccttatttggaggaactaaaaaattgta 244  T

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Target: scaffold0330 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 13214 - 13305
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatg 143  Q
    ||||| ||||| |||  |||| ||||||||||||||  ||||| ||||||||||| || |||||| ||||   |||||||||||||||||||    
T  13214 taatcccaacccttgactttaaatttgccacatgtcacacatcaataaagtgaaaaggaataaattgaggaaacctaaatggagcaaagatg 13305  T

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Target: scaffold0330; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 12613 - 12517
Alignment:
Q  52 taatctcaaccattggttttatatttgccacatgtccaacatctataaagtgaaatggtataaatggaggcttcctaaatggagcaaagatgcactc 148  Q
    ||||| ||||| ||| ||||| ||||||||||||||  ||| | ||||||||||| || |||||| ||||   | ||||| ||||||||||| ||||    
T  12613 taatcccaacccttgtttttacatttgccacatgtcacacaacaataaagtgaaaaggaataaattgaggaaacttaaatagagcaaagatgaactc 12517  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 29219 - 29277
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctca-ttggaggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  29219 gggttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgta 29277  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 12361 - 12316
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattgg 198  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||    
T  12361 tttggggggttaacttttcttcatattacaaaaccctcctcattgg 12316  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 90987 - 90942
Alignment:
Q  153 tttggggggttaatttttcttcataatacaaaactctcctcattgg 198  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||    
T  90987 tttggggggttaacttttcttcatattacaaaaccctcctcattgg 90942  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 20851 - 20785
Alignment:
Q  37 tttttctaagccttctaatctcaaccattggttttatatttgccacatgtccaacatctataaagtg 103  Q
    |||||| || |||| |||||||| ||||||||||||| ||| |||||||||  ||||||| ||||||    
T  20851 tttttccaaaccttttaatctcagccattggttttatttttaccacatgtcacacatctagaaagtg 20785  T

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Target: scaffold0388 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 7037 - 7082
Alignment:
Q  151 gttttggggggttaatttttcttcataatacaaaactctcctcatt 196  Q
    |||||||| |||| | |||||||||||||||||||| |||||||||    
T  7037 gttttgggaggtttacttttcttcataatacaaaaccctcctcatt 7082  T

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Target: scaffold0274 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 15893 - 15950
Alignment:
Q  159 gggttaatttttcttcataatacaaaactctcctcattggaggaactcaaaaattgta 216  Q
    |||||||||||||||||||||  |||| |||||||||| | |||| | ||||||||||    
T  15893 gggttaatttttcttcataatgaaaaaatctcctcatttggggaatttaaaaattgta 15950  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 82769 - 82829
Alignment:
Q  157 gggggttaatttttcttcataatacaaaactctcctcattgga-ggaactcaaaaattgta 216  Q
    ||||||| |||||||||||||||||||||  ||||| ||| || ||||||| |||||||||    
T  82769 gggggtttatttttcttcataatacaaaatcctcctaatttgagggaactccaaaattgta 82829  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 196
Target Start/End: Complemental strand, 45016 - 44988
Alignment:
Q  168 tttcttcataatacaaaactctcctcatt 196  Q
    |||||||||||||||||||||||||||||    
T  45016 tttcttcataatacaaaactctcctcatt 44988  T

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