View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12027_low_8 (Length: 319)

Name: NF12027_low_8
Description: NF12027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12027_low_8
NF12027_low_8
[»] chr2 (31 HSPs)
chr2 (1-75)||(45555376-45555450)
chr2 (1-69)||(35292510-35292578)
chr2 (1-72)||(13568551-13568622)
chr2 (1-70)||(37725550-37725619)
chr2 (1-69)||(490072-490140)
chr2 (1-69)||(41839654-41839722)
chr2 (1-71)||(1859925-1859995)
chr2 (1-71)||(7504363-7504433)
chr2 (1-70)||(18009293-18009362)
chr2 (1-70)||(18576650-18576719)
chr2 (1-66)||(33424072-33424137)
chr2 (1-70)||(40533250-40533319)
chr2 (1-69)||(21836336-21836404)
chr2 (1-69)||(36947821-36947889)
chr2 (1-72)||(21425209-21425280)
chr2 (1-72)||(26738029-26738100)
chr2 (1-71)||(39879258-39879328)
chr2 (1-70)||(2317177-2317246)
chr2 (1-70)||(6657442-6657511)
chr2 (1-69)||(10711277-10711345)
chr2 (1-50)||(28394087-28394136)
chr2 (1-69)||(3724280-3724348)
chr2 (1-69)||(36049805-36049873)
chr2 (1-49)||(36192309-36192357)
chr2 (1-68)||(16815189-16815256)
chr2 (1-68)||(16854346-16854413)
chr2 (1-72)||(33716633-33716704)
chr2 (1-67)||(5085177-5085243)
chr2 (1-66)||(44068052-44068117)
chr2 (1-69)||(14819916-14819984)
chr2 (5-69)||(15206079-15206143)
[»] chr7 (20 HSPs)
chr7 (1-78)||(47069300-47069377)
chr7 (1-70)||(45197143-45197212)
chr7 (1-69)||(32186764-32186832)
chr7 (1-69)||(41715480-41715548)
chr7 (1-72)||(1282182-1282253)
chr7 (1-75)||(3061896-3061970)
chr7 (1-71)||(7574453-7574523)
chr7 (1-70)||(2038434-2038503)
chr7 (1-70)||(18922575-18922644)
chr7 (1-69)||(24505123-24505191)
chr7 (1-69)||(25866905-25866973)
chr7 (1-69)||(47219956-47220024)
chr7 (3-70)||(15090667-15090734)
chr7 (1-72)||(42039299-42039370)
chr7 (1-72)||(42902725-42902796)
chr7 (1-75)||(27130882-27130956)
chr7 (1-67)||(33704886-33704952)
chr7 (1-70)||(40947312-40947381)
chr7 (2-69)||(17334739-17334805)
chr7 (1-30)||(39444004-39444033)
[»] chr3 (30 HSPs)
chr3 (1-72)||(52782498-52782569)
chr3 (1-72)||(52788762-52788833)
chr3 (1-70)||(55365714-55365783)
chr3 (1-70)||(44962601-44962670)
chr3 (1-70)||(48925750-48925819)
chr3 (1-69)||(32719985-32720053)
chr3 (1-69)||(37567218-37567286)
chr3 (1-69)||(48389098-48389166)
chr3 (1-71)||(44500454-44500524)
chr3 (1-71)||(54008903-54008973)
chr3 (1-70)||(346689-346758)
chr3 (1-70)||(33830529-33830598)
chr3 (1-70)||(54011141-54011210)
chr3 (1-72)||(1326598-1326669)
chr3 (1-72)||(2667481-2667552)
chr3 (1-70)||(9322772-9322841)
chr3 (1-69)||(45927220-45927288)
chr3 (1-69)||(49951264-49951332)
chr3 (1-69)||(50560700-50560768)
chr3 (1-71)||(26409958-26410028)
chr3 (1-67)||(50465473-50465539)
chr3 (1-71)||(53186002-53186072)
chr3 (1-55)||(53376605-53376659)
chr3 (1-70)||(35320701-35320770)
chr3 (1-35)||(14460215-14460249)
chr3 (1-69)||(7157377-7157445)
chr3 (1-30)||(51235558-51235587)
chr3 (6-70)||(9506902-9506966)
chr3 (6-70)||(9514877-9514941)
chr3 (25-77)||(16136985-16137037)
[»] chr8 (26 HSPs)
chr8 (1-71)||(45393785-45393855)
chr8 (3-69)||(14914154-14914220)
chr8 (1-70)||(21835430-21835499)
chr8 (1-69)||(29565688-29565756)
chr8 (1-70)||(37404941-37405010)
chr8 (1-69)||(3052799-3052867)
chr8 (1-73)||(45401144-45401216)
chr8 (1-71)||(27101151-27101221)
chr8 (1-74)||(28897242-28897315)
chr8 (1-66)||(37766641-37766706)
chr8 (1-70)||(38971463-38971532)
chr8 (1-70)||(39002561-39002630)
chr8 (1-69)||(196403-196471)
chr8 (1-69)||(311240-311308)
chr8 (1-67)||(464250-464316)
chr8 (1-75)||(29039951-29040025)
chr8 (1-66)||(36835345-36835410)
chr8 (1-73)||(12266415-12266487)
chr8 (1-69)||(38803434-38803502)
chr8 (1-74)||(43183063-43183144)
chr8 (1-69)||(7223489-7223551)
chr8 (1-69)||(1426667-1426735)
chr8 (70-131)||(4007661-4007723)
chr8 (1-35)||(18844498-18844532)
chr8 (1-67)||(41572047-41572113)
chr8 (1-30)||(38627026-38627055)
[»] chr5 (28 HSPs)
chr5 (1-67)||(16729726-16729792)
chr5 (1-70)||(10688392-10688461)
chr5 (1-69)||(31236928-31236996)
chr5 (1-68)||(9530363-9530430)
chr5 (1-74)||(2148465-2148538)
chr5 (1-70)||(22798409-22798478)
chr5 (1-70)||(25684072-25684141)
chr5 (1-69)||(11758612-11758680)
chr5 (1-55)||(32063865-32063919)
chr5 (1-67)||(33001786-33001852)
chr5 (1-66)||(23189406-23189471)
chr5 (1-70)||(28770284-28770352)
chr5 (1-69)||(15725945-15726013)
chr5 (1-69)||(37314176-37314244)
chr5 (1-69)||(41631218-41631286)
chr5 (1-70)||(4094657-4094726)
chr5 (1-70)||(39541058-39541127)
chr5 (1-66)||(40340430-40340495)
chr5 (1-66)||(42534732-42534797)
chr5 (1-69)||(10453280-10453348)
chr5 (1-69)||(13589203-13589271)
chr5 (1-69)||(19125912-19125980)
chr5 (1-69)||(32624176-32624244)
chr5 (1-80)||(37963323-37963402)
chr5 (4-66)||(8068660-8068722)
chr5 (2-69)||(22279556-22279622)
chr5 (1-70)||(3881831-3881900)
chr5 (24-68)||(27979014-27979058)
[»] chr4 (25 HSPs)
chr4 (1-74)||(46222333-46222406)
chr4 (1-72)||(54499572-54499643)
chr4 (1-70)||(10779330-10779399)
chr4 (1-69)||(42244876-42244944)
chr4 (1-69)||(48550005-48550073)
chr4 (1-72)||(33612520-33612591)
chr4 (1-71)||(21514987-21515057)
chr4 (1-67)||(46633943-46634009)
chr4 (1-66)||(23639574-23639639)
chr4 (1-66)||(23645232-23645297)
chr4 (1-70)||(36569647-36569716)
chr4 (1-70)||(45629107-45629176)
chr4 (1-69)||(24291978-24292046)
chr4 (1-73)||(44998407-44998479)
chr4 (1-71)||(27967507-27967578)
chr4 (1-72)||(46630985-46631056)
chr4 (1-70)||(16004872-16004941)
chr4 (14-70)||(10972952-10973008)
chr4 (1-73)||(52257128-52257200)
chr4 (1-69)||(54505905-54505973)
chr4 (1-76)||(38955381-38955458)
chr4 (1-71)||(42680929-42680999)
chr4 (1-73)||(27635735-27635807)
chr4 (50-79)||(55722466-55722495)
chr4 (1-69)||(56016796-56016864)
[»] chr1 (40 HSPs)
chr1 (1-73)||(3150524-3150596)
chr1 (1-64)||(52274058-52274121)
chr1 (1-67)||(17376357-17376423)
chr1 (1-67)||(22821249-22821315)
chr1 (1-74)||(9260155-9260228)
chr1 (3-72)||(33829206-33829275)
chr1 (3-72)||(33838691-33838760)
chr1 (1-70)||(40850022-40850091)
chr1 (1-70)||(46872368-46872437)
chr1 (1-69)||(24248141-24248209)
chr1 (1-69)||(27801810-27801878)
chr1 (1-67)||(8569315-8569381)
chr1 (1-71)||(14190888-14190958)
chr1 (1-67)||(47861065-47861131)
chr1 (1-70)||(7426999-7427068)
chr1 (1-70)||(25493497-25493566)
chr1 (1-69)||(9223194-9223262)
chr1 (1-69)||(10061157-10061225)
chr1 (1-69)||(43224984-43225052)
chr1 (1-76)||(48868402-48868477)
chr1 (3-69)||(14131690-14131756)
chr1 (1-70)||(37765593-37765662)
chr1 (1-66)||(44647584-44647649)
chr1 (1-70)||(48480849-48480918)
chr1 (9-70)||(49685984-49686045)
chr1 (1-70)||(52079440-52079509)
chr1 (1-69)||(2684011-2684079)
chr1 (1-69)||(5057199-5057267)
chr1 (1-73)||(49739139-49739211)
chr1 (1-67)||(10635736-10635802)
chr1 (1-73)||(20280218-20280290)
chr1 (1-69)||(27038543-27038611)
chr1 (1-69)||(29171165-29171233)
chr1 (1-71)||(28095087-28095156)
chr1 (1-67)||(39852959-39853025)
chr1 (4-66)||(41321008-41321070)
chr1 (1-70)||(50502683-50502756)
chr1 (1-70)||(1658879-1658948)
chr1 (1-34)||(31571308-31571341)
chr1 (1-69)||(33234393-33234461)
[»] chr6 (12 HSPs)
chr6 (1-68)||(35225169-35225236)
chr6 (1-71)||(18870920-18870990)
chr6 (1-70)||(6016143-6016212)
chr6 (1-69)||(1338853-1338921)
chr6 (1-71)||(32519071-32519141)
chr6 (1-70)||(9226199-9226268)
chr6 (1-74)||(16989451-16989524)
chr6 (1-70)||(34315461-34315530)
chr6 (1-73)||(26810773-26810845)
chr6 (2-69)||(24025531-24025597)
chr6 (1-35)||(27719343-27719377)
chr6 (1-35)||(33954486-33954520)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-71)||(166756-166826)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-69)||(15380-15448)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-67)||(26981-27047)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-70)||(13602-13671)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-69)||(17832-17900)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-69)||(291623-291691)
[»] scaffold1999 (1 HSPs)
scaffold1999 (1-69)||(1003-1071)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-70)||(21459-21526)
[»] scaffold0493 (1 HSPs)
scaffold0493 (12-73)||(1377-1438)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-35)||(8765-8799)


Alignment Details
Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45555450 - 45555376
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatat 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  45555450 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtaccatagaatttgccttatat 45555376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35292578 - 35292510
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  35292578 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtaccatagaatttgcc 35292510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13568551 - 13568622
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  13568551 tttattattaattttacgatttggtgtaccgatacatccaaatttattggatgtaccataaaatttgcctta 13568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37725619 - 37725550
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  37725619 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 37725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 490072 - 490140
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  490072 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41839722 - 41839654
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||    
T  41839722 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccataaaatttgcc 41839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1859995 - 1859925
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| |||||||||||||||    
T  1859995 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcctt 1859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7504363 - 7504433
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| |||||||||||||||    
T  7504363 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcctt 7504433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18009293 - 18009362
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||| ||||||    
T  18009293 tttattattaattttacgatttggtgtaccgatacacctaaatttattggatgtatcatagaacttgcct 18009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18576650 - 18576719
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||| |||||||||    
T  18576650 tttattattaattttacgacttggtgtaccaatacacccaaatttattggatgtaccataaaatttgcct 18576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33424072 - 33424137
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||    
T  33424072 tttattattaattttacgacttggcgtaccgatacacccaaatttattggatgtaccatagaattt 33424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40533319 - 40533250
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  40533319 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 40533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21836404 - 21836336
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||| |||||||||||||    
T  21836404 tttattattaattttacgacttggtgtaccgatacacccgaatttattgggtgtaccatagaatttgcc 21836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36947821 - 36947889
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| |||||||||||||    
T  36947821 tttattattaattttacgacttggtgtacagatacacccaaatttattgggtgtaccatagaatttgcc 36947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21425280 - 21425209
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||| |||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  21425280 tttattattaatttaacgaattggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcctta 21425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26738100 - 26738029
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||| | || ||||||||||||||||    
T  26738100 tttattattaattttacgacttgatgtaccgatacatccaaattcattgggtataccatagaatttgcctta 26738029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39879258 - 39879328
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| ||| |||||| |||||||||||||||    
T  39879258 tttattattaattttatgacttggtgtaccgatacacccaaattcattagatgtaccatagaatttgcctt 39879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2317177 - 2317246
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||| ||| |||||    
T  2317177 tttattattaattttatgacttggtgtaccgatacacccaaatttattggatgtaccataaaatatgcct 2317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6657511 - 6657442
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||  |||| ||||||||||||||    
T  6657511 tttattattaattttacgacttggtgtaccgatacacccaaattcattgagtgtaccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10711345 - 10711277
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||| | |||| |||||||||||||    
T  10711345 tttattattaattttacgacttggtgtaccgatagacccaaatttattaggtgtaccatagaatttgcc 10711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28394136 - 28394087
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattgg 50  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28394136 tttattattaattttacgacttggtgtaccgatacacccaaatttattgg 28394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3724280 - 3724348
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||||| | |||| |||||||||||||    
T  3724280 tttattattaattttacaacttggtataccgatacacccaaatttattaggtgtaccatagaatttgcc 3724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36049805 - 36049873
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||| |||| ||||||||||||||||||||||  | ||||||| ||||| ||||||||||||||||    
T  36049805 tttattactaatattacgacttggtgtaccgatacacctaaatttagtggatatatcatagaatttgcc 36049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36192309 - 36192357
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattg 49  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  36192309 tttattattaattttacgacttggtgtaccgatacacccaaatttattg 36192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16815189 - 16815256
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgc 68  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||| | |||| |||| |||||||    
T  16815189 tttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16854346 - 16854413
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgc 68  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||| | |||| |||| |||||||    
T  16854346 tttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16854413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33716633 - 33716704
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||| ||| || | |||||||||||||||  |||||||||||||||||| | ||||||||||||||    
T  33716633 tttattattagtttaacaaattggtgtaccgatacacccaaatttattggatgtaccgtagaatttgcctta 33716704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5085177 - 5085243
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||||||||||||||| |||||  | ||||||||||| ||||  ||||||||||    
T  5085177 tttattattaattttacgacttggtgtactgatacacctaaatttattgggtgtactatagaatttg 5085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44068117 - 44068052
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    |||||||||||||| | || ||||| |||||||||  ||||||||||||||| || |||| |||||    
T  44068117 tttattattaatttaatgaattggtataccgatacacccaaatttattggatataccataaaattt 44068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14819984 - 14819916
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||| ||||| |||| ||| |||||  ||||||||||  | |||| |||||||||||||    
T  14819984 tttattattaatttaacgacatggtatactgatacacccaaatttatcaggtgtaccatagaatttgcc 14819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 15206079 - 15206143
Alignment:
Q  5 ttattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||| |||| ||||||||||  |||   ||||||| || ||||||||||||||||||||    
T  15206079 ttattaatttaacgatttggtgtaccagtacactcaaattttttagatgtatcatagaatttgcc 15206143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47069300 - 47069377
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatattta 78  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  47069300 tttattattaattttatgacttggtgtaccgatacatccaaatttattggatgtaccatagaatttgccatatattta 47069377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45197143 - 45197212
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||||||||    
T  45197143 tttattattaattttacgacttagtgtaccgatacatccaaatttattgggtgtaccatagaatttgcct 45197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32186764 - 32186832
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  32186764 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtacaatagaatttgcc 32186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41715480 - 41715548
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  41715480 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtacaatagaatttgcc 41715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1282253 - 1282182
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  1282253 tttattattaattttacgacttagtgtaccgatacacccaaatttattgggtgtaccatagaatttgcctta 1282182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3061970 - 3061896
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatat 75  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||| |||||||| |||||    
T  3061970 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccatatat 3061896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7574453 - 7574523
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  7574453 tttattattaatttaacggattggtgtaccgatacatccaaatttattggatgtaccatagaatttgcctt 7574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2038434 - 2038503
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||| |||| |||||||||    
T  2038434 tttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccataaaatttgcct 2038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18922644 - 18922575
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| |||||  |||||||||||||    
T  18922644 tttattattaattttacgacttggtgtaccgatacacccaaatttattgaatgtactatagaatttgcct 18922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24505191 - 24505123
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  24505191 tttattattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 24505123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25866973 - 25866905
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| |||||||||||||    
T  25866973 tttattattaattttacgacttggtgtactgatacacccaaatttattgggtgtaccatagaatttgcc 25866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47220024 - 47219956
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  47220024 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 15090734 - 15090667
Alignment:
Q  3 tattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  15090734 tattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42039370 - 42039299
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||||| | ||||||||||||||    
T  42039370 tttattattaattttacaacttggtgtatcgatacacccaaatttattggatgtaccgtagaatttgcctta 42039299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42902725 - 42902796
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||| | |||| ||||||||||||||||    
T  42902725 tttattattaattttacgacttggtgtaccaatacacccaaatttattaggtgtaccatagaatttgcctta 42902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27130882 - 27130956
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatat 75  Q
    |||||||||||||||| |||||||||||||| |||  ||||||||||||| |||| ||||||||||||| |||||    
T  27130882 tttattattaattttatgacttggtgtaccggtacacccaaatttattgggtgtaccatagaatttgccatatat 27130956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33704886 - 33704952
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||||||||| | ||||||||| |  |||||||||||||||| |||||||||||    
T  33704886 tttattattaattttacgacttgatataccgatacatataaatttattggatgtaccatagaatttg 33704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40947312 - 40947381
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| || ||||| | ||||  |||||||||||||||||| ||||||||||||||    
T  40947312 tttattattaattttacgaattagtgtaacaatacacccaaatttattggatgtaccatagaatttgcct 40947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 17334805 - 17334739
Alignment:
Q  2 ttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||||||||||| |||  ||||||| ||||| |||| |||||||||||||    
T  17334805 ttattattaattttacaacttggtgtaccggtacacccaaattcattgg-tgtaccatagaatttgcc 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39444033 - 39444004
Alignment:
Q  1 tttattattaattttacgacttggtgtacc 30  Q
    ||||||||||||||||||||||||||||||    
T  39444033 tttattattaattttacgacttggtgtacc 39444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52782498 - 52782569
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  52782498 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctta 52782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52788762 - 52788833
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  52788762 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctta 52788833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 55365714 - 55365783
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  55365714 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcct 55365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44962670 - 44962601
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||    
T  44962670 tttattattaattttacgacttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcct 44962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48925750 - 48925819
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||    
T  48925750 tttattattaattttacgacttggtgtaccgatacattcaaatttattgggtgtaccatagaatttgcct 48925819  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32720053 - 32719985
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  32720053 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37567286 - 37567218
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||    
T  37567286 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtaccgtagaatttgcc 37567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48389098 - 48389166
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||    
T  48389098 tttattattaattttacgacttggtgtatcgatacatccaaatttattgggtgtaccatagaatttgcc 48389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44500454 - 44500524
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||| |||| |||||||||||||||    
T  44500454 tttattattaattttacgacttggtgtaccgatgcacccaaatttattgggtgtaccatagaatttgcctt 44500524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 54008973 - 54008903
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| |||||||||||||||    
T  54008973 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcctt 54008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 346758 - 346689
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||||| |||| ||||||||||||||    
T  346758 tttattattaattttaccacttagtgtaccgatacatccaaatttattgggtgtaccatagaatttgcct 346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33830598 - 33830529
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  33830598 tttattattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 33830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54011210 - 54011141
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||    
T  54011210 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtactatagaatttgcct 54011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1326669 - 1326598
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||||||| | ||||||||||||||| |||||||| ||||| |||| ||||||||||||||||    
T  1326669 tttattattaattttacaatttggtgtaccgatacatccaaattcattgggtgtaccatagaatttgcctta 1326598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2667552 - 2667481
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||| ||||||||||||||||||  || |||||||||| |||| ||||||||||||||||    
T  2667552 tttattattaattttatgacttggtgtaccgatacaccctaatttattgggtgtaccatagaatttgcctta 2667481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9322772 - 9322841
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||| |||| ||||||||||||||    
T  9322772 tttattatttattttacgacttggtgtaccgatacaccaaaatttattgggtgtaccatagaatttgcct 9322841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45927288 - 45927220
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| |||| ||||||||    
T  45927288 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccataaaatttgcc 45927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 49951264 - 49951332
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||| | |||| |||||||||||||    
T  49951264 tttattattaattttacgacttgatgtgccgatacatccaaatttattaggtgtaccatagaatttgcc 49951332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50560700 - 50560768
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| | || ||||||| |||||    
T  50560700 tttattattaattttacgacttggtgtaccgatacatctaaatttattgggtttaccatagaacttgcc 50560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26409958 - 26410028
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||| | || |||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  26409958 tttattattaatttaatgaattggtgtaccgatacacccaaatttattggatgtaccataaaatttgcctt 26410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50465539 - 50465473
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||| ||||| |||| ||||||    
T  50465539 tttattattaattttacaacttggtgtaccgatacacccaaatttattgaatgtaccataaaatttg 50465473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 53186072 - 53186002
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||| | |||| | |||||||||||||    
T  53186072 tttattattaattttacgatttggtgtaccgatacacccaaatttatttggtgtaccgtagaatttgcctt 53186002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53376659 - 53376605
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgta 55  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  53376659 tttattattaattttacgaattggtgtactgatacatccaaatttattggatgta 53376605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35320701 - 35320770
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||| |||| ||||||||||||||||||||||  ||||||||| ||| |||| ||||||||||||||    
T  35320701 tttattactaatattacgacttggtgtaccgatacacccaaatttagtgggtgtaccatagaatttgcct 35320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 14460249 - 14460215
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  14460249 tttattattaattttacgacttggtgtaccgatac 14460215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7157377 - 7157445
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||| | | || |  ||||||| ||||| |||| |||||||||||||    
T  7157377 tttattattaattttacgacttggtgcatcaatgcacccaaattcattgggtgtaccatagaatttgcc 7157445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 51235587 - 51235558
Alignment:
Q  1 tttattattaattttacgacttggtgtacc 30  Q
    ||||||||||||||||||||||||||||||    
T  51235587 tttattattaattttacgacttggtgtacc 51235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 9506966 - 9506902
Alignment:
Q  6 tattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||| | || ||||||||||||| |   ||||| |||||| |||||||||||||||||||    
T  9506966 tattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 9514941 - 9514877
Alignment:
Q  6 tattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||| | || ||||||||||||| |   ||||| |||||| |||||||||||||||||||    
T  9514941 tattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 16136985 - 16137037
Alignment:
Q  25 tgtaccgatacttccaaatttattggatgtatcatagaatttgccttatattt 77  Q
    |||||||||||   ||||| ||||||||||| ||||||||||||| |||||||    
T  16136985 tgtaccgatacactcaaatatattggatgtaccatagaatttgccctatattt 16137037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45393785 - 45393855
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  45393785 tttattattaattttacaacttggtgtaccgatacatccaaatttattggatgtaccatagaatttgcctt 45393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14914154 - 14914220
Alignment:
Q  3 tattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  14914154 tattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcc 14914220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21835499 - 21835430
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  21835499 tttattattaattttacgacttggtgtaccgatacagccaaatttattgggtgtaacatagaatttgcct 21835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29565688 - 29565756
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  29565688 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37404941 - 37405010
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||| ||| |||||||||||||||||    
T  37404941 tttattattaattttatgacttggtgtaccgatacacccaaatttattagatatatcatagaatttgcct 37405010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3052867 - 3052799
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||| || |||||||||||||    
T  3052867 tttattattaatttaacgaattggtgtaccgatacatccaaatttattggatataccatagaatttgcc 3052799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45401216 - 45401144
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||| |||||| |||||||||| ||||||    
T  45401216 tttattattaattttacaacttgatgtaccgatacatccaaatttattagatgtaccatagaatttaccttat 45401144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27101151 - 27101221
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||| ||||||||||||||||||||  | |||||||||||||||| ||||||| |||||||    
T  27101151 tttattattaatttaacgacttggtgtaccgatacacctaaatttattggatgtaccatagaaattgcctt 27101221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28897242 - 28897315
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttata 74  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||||| |||| ||||||||||||| ||||    
T  28897242 tttattattaattttatgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatttgccatata 28897315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37766641 - 37766706
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| | |||| ||||||||||    
T  37766641 tttattattaattttacgacttggtataccgatacatccaaatttattaggtgtaccatagaattt 37766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38971532 - 38971463
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||  |||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||    
T  38971532 tttattattaaacttacgactaggtgtaccgatacaaccaaatttattggatgtatcgtagaatttgcct 38971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39002630 - 39002561
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||  |||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||    
T  39002630 tttattattaaacttacgactaggtgtaccgatacaaccaaatttattggatgtatcgtagaatttgcct 39002561  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 196403 - 196471
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||   | |||||||||| ||||| |||||||||||||    
T  196403 tttattattaattttacgacttggtgtaccgataaacctaaatttattgaatgtaccatagaatttgcc 196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 311240 - 311308
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||   | |||||||||| ||||| |||||||||||||    
T  311240 tttattattaattttacgacttggtgtaccgataaacctaaatttattgaatgtaccatagaatttgcc 311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 464316 - 464250
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||||| || ||||||||||||  ||||||||||||| |||| |||||||||||    
T  464316 tttattattaattttacgagttagtgtaccgatacacccaaatttattgggtgtaccatagaatttg 464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29039951 - 29040025
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatat 75  Q
    |||||||||||||| | || |||||||||||||||  ||||||||||| |||||| ||||||||||||| |||||    
T  29039951 tttattattaatttaatgaattggtgtaccgatacacccaaatttatttgatgtaccatagaatttgccatatat 29040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36835410 - 36835345
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||| | |||| ||||||||||    
T  36835410 tttattattaattgtacgacttggtgtaccgatacacccaaatttatttggtgtaccatagaattt 36835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12266415 - 12266487
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    ||||||||||||||||||||||| |||||||||||  ||||||| | ||| |||| ||||||||||| |||||    
T  12266415 tttattattaattttacgacttgatgtaccgatacacccaaattcaatgggtgtaccatagaatttgtcttat 12266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38803502 - 38803434
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||| | ||||   |||||||||||    
T  38803502 tttattattaattttacgacttggtgcaccgatacatccaaatttattaggtgtacagtagaatttgcc 38803434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43183063 - 43183144
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac--------ttccaaatttattggatgtatcatagaatttgccttata 74  Q
    |||||||||||||||||||||||||||||||||||        ||  |||||||||||||||| ||||||||||||||||||    
T  43183063 tttattattaattttacgacttggtgtaccgatacattcaaatttataaatttattggatgtagcatagaatttgccttata 43183144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7223551 - 7223489
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||      |||||||| |||||||||||||    
T  7223551 tttattattaattttacgacttggtgtaccgatacatccaa------tggatgtaccatagaatttgcc 7223489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1426667 - 1426735
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||| | || |||| ||||||||    
T  1426667 tttattattaattttacgacttggtgtaccgatatactcaaatttattgggtctaccatacaatttgcc 1426735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 4007723 - 4007661
Alignment:
Q  70 ttatatttattctgaatcagtacattaaatttatttagttctataatggt-cttttagttatt 131  Q
    |||| ||||| | ||||| ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  4007723 ttatgtttataccgaatcggtacattaagtttatttagttttataatggtccttttagttatt 4007661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 18844498 - 18844532
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  18844498 tttattattaatttaacgacttggtgtaccgatac 18844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41572047 - 41572113
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||| || | || |||||||||||  |||||||||||||| |||| |||| ||||||    
T  41572047 tttattattaatttaacaaattagtgtaccgatatatccaaatttattgggtgtaccatataatttg 41572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38627055 - 38627026
Alignment:
Q  1 tttattattaattttacgacttggtgtacc 30  Q
    ||||||||||||||||||||||||||||||    
T  38627055 tttattattaattttacgacttggtgtacc 38627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16729792 - 16729726
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16729792 tttattattaattttacgacttggtgtaccgatacatccaaatttattggatgtaccatagaatttg 16729726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10688461 - 10688392
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  10688461 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcct 10688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31236928 - 31236996
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||    
T  31236928 tttattattaattttacgacttgatgtaccgatacatccaaatttattgggtgtaccatagaatttgcc 31236996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9530430 - 9530363
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgc 68  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  9530430 tttattattaattttacgacttggtgtaccgatacacccaaattcattggatgtaccatagaatttgc 9530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2148465 - 2148538
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttata 74  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| |||| || |||||||||||||||    
T  2148465 tttattattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccaaagaatttgccttata 2148538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22798409 - 22798478
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  22798409 tttattattaattttacaacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 22798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25684141 - 25684072
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  25684141 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 25684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11758680 - 11758612
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| |||||||||||||    
T  11758680 tttattattaattttacgacttggtgtactgatacacccaaatttattgggtgtaccatagaatttgcc 11758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32063865 - 32063919
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgta 55  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  32063865 tttattattaattttacgatttggtgtaccgatacatccaaatttattggatgta 32063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33001786 - 33001852
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| |||||||||||    
T  33001786 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttg 33001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23189406 - 23189471
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||| |||| ||||||||||    
T  23189406 tttattattaattttacgacttgatgtaccgatacacccaaatttattgggtgtaccatagaattt 23189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28770284 - 28770352
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| ||||||||||||||    
T  28770284 tttattattaattttacgacttggtgtactgatacacccaaatttattgg-tgtaccatagaatttgcct 28770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15726013 - 15725945
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||| |||| |||| ||||||||    
T  15726013 tttattattaattttacgacttggtgtatcgatacacccaaatttattgggtgtaccataaaatttgcc 15725945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37314176 - 37314244
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||| ||||||||||||  ||||||||||||| |||| |||||||||||||    
T  37314176 tttattattaattttaggacttagtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41631286 - 41631218
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||| |||| |||| ||||||||    
T  41631286 tttattattaattttacgacttggtgtaccgatacacctaaatttattgggtgtaccataaaatttgcc 41631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4094726 - 4094657
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| ||| |||||||| |  |||||||||||||||||||  |||||||||||||    
T  4094726 tttattattaattttacgatttgatgtaccgacatatccaaatttattggatgtacgatagaatttgcct 4094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39541058 - 39541127
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||| || |||||||| |||||| |||||||||||||| ||||  |||||||||||||    
T  39541058 tttattattaattttatgatttggtgtatcgatacatccaaatttattgggtgtacaatagaatttgcct 39541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40340495 - 40340430
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    |||||||||||||||| ||||||||||| ||||||  ||||||||||||| |||| ||||||||||    
T  40340495 tttattattaattttatgacttggtgtaacgatacacccaaatttattgggtgtaccatagaattt 40340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42534732 - 42534797
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||| || |||| ||||||||||    
T  42534732 tttattattaattctacgacttggtgtaccgatacacccaaatttatagggtgtaccatagaattt 42534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10453348 - 10453280
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||| | |||| | |||||||||||    
T  10453348 tttattattaattttacgatttggtgtaccgatacacccaaatttatttggtgtaccgtagaatttgcc 10453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13589203 - 13589271
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||||| |||| | |||||||||||    
T  13589203 tttattattaattttacaacttggtgtaccgatacacccaaattcattgggtgtaccgtagaatttgcc 13589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19125980 - 19125912
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| |||||| | |||||||||  | |||||||||||||||| |||||||||||||    
T  19125980 tttattattaattttatgacttgatataccgatacacctaaatttattggatgtaccatagaatttgcc 19125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32624244 - 32624176
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||| |||| |||||||||||||||  ||||||||||||| |||| |||| ||||||||    
T  32624244 tttattattaatttaacgaattggtgtaccgatacacccaaatttattgggtgtaccataaaatttgcc 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37963323 - 37963402
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatatttatt 80  Q
    |||||||||||||| |  | ||||||||||||||| ||||||||||||||| |||  |||||||||||| ||| ||||||    
T  37963323 tttattattaatttaataaattggtgtaccgatacatccaaatttattggacgtactatagaatttgccatatctttatt 37963402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 8068660 - 8068722
Alignment:
Q  4 attattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||||| |||| ||||||||||    
T  8068660 attattaattttatgacttggtgtaacgatacacccaaatttattgggtgtaccatagaattt 8068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 22279556 - 22279622
Alignment:
Q  2 ttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||||||||||| |||  ||||||| ||||| |||| |||||||||||||    
T  22279556 ttattattaattttacaacttggtgtaccggtacacccaaattcattgg-tgtaccatagaatttgcc 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3881900 - 3881831
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||| || |||||||||| ||||  | |||||||||| || || |||| |||||||||    
T  3881900 tttattattaattttatgatttggtgtaccaatacacctaaatttattgaatataccatataatttgcct 3881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 27979058 - 27979014
Alignment:
Q  24 gtgtaccgatacttccaaatttattggatgtatcatagaatttgc 68  Q
    ||||||||||||   ||||| ||||||||||||||||||||||||    
T  27979058 gtgtaccgatacactcaaatatattggatgtatcatagaatttgc 27979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46222333 - 46222406
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttata 74  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||    
T  46222333 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgccttata 46222406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 54499643 - 54499572
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||    
T  54499643 tttattattaattttacgacttggtgtaccgatacatccaaattcactggatgtaccatagaatttgcctta 54499572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10779330 - 10779399
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| || ||||||||||||||    
T  10779330 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42244876 - 42244944
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||    
T  42244876 tttattattaattttacgacttgatgtaccgatacatccaaatttattgggtgtaccatagaatttgcc 42244944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48550005 - 48550073
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  48550005 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtacaatagaatttgcc 48550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33612591 - 33612520
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||||||||||    
T  33612591 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcctta 33612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21515057 - 21514987
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||||||    
T  21515057 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcctt 21514987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46633943 - 46634009
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||    
T  46633943 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtaccataaaatttg 46634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23639574 - 23639639
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  23639574 tttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23645232 - 23645297
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  23645232 tttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36569716 - 36569647
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||| |||||||||    
T  36569716 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 36569647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45629176 - 45629107
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  45629176 tttattattaattttacgacttagtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 45629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24292046 - 24291978
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||| |||| |||||||||||||    
T  24292046 tttattattaattttacgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44998479 - 44998407
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||||| |||| |||||||||||||||||    
T  44998479 tttattattaattttatgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatttgccttat 44998407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27967578 - 27967507
Alignment:
Q  1 tttattattaattttacgacttgg-tgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  27967578 tttattattaattttacgacttgggtgtaccgatacacccaaatttattgggtgtaacatagaatttgcctt 27967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46630985 - 46631056
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||||| |||| |||||||||| |||||    
T  46630985 tttattattaattgtacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaattttcctta 46631056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16004872 - 16004941
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||||||||| |||| |||||||||    
T  16004872 tttattattaattttacgacttgatataccgatacacccaaatttattggatgtaccataaaatttgcct 16004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 10972952 - 10973008
Alignment:
Q  14 ttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||  ||||||||||||||| || ||||||||||||||    
T  10972952 ttacgacttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52257200 - 52257128
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    ||||||||||||||||||||||| |  | ||||||  ||||||||||||||| || |||||||||||||||||    
T  52257200 tttattattaattttacgacttgatacatcgatacacccaaatttattggatataccatagaatttgccttat 52257128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 54505905 - 54505973
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||| || | |||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  54505905 tttattattaatttaacaaattggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38955381 - 38955458
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaat--ttattggatgtatcatagaatttgccttatatt 76  Q
    |||||||||||||||||||||||||||||| ||||   |||||  || ||||||||| ||| ||||||||||||||||    
T  38955381 tttattattaattttacgacttggtgtaccaatacactcaaattattgttggatgtaccatggaatttgccttatatt 38955458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42680929 - 42680999
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    ||||||||||||||||||||||||| |||| |||| || ||||||| | |||||| | |||||||||||||    
T  42680929 tttattattaattttacgacttggtataccaatacatctaaatttagtagatgtaccgtagaatttgcctt 42680999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27635807 - 27635735
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    |||||||||||||| |||||||||||||| |||||  ||||||||||||  |||| | ||||||||| |||||    
T  27635807 tttattattaatttaacgacttggtgtactgatacacccaaatttattgagtgtaccgtagaatttgtcttat 27635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 55722495 - 55722466
Alignment:
Q  50 gatgtatcatagaatttgccttatatttat 79  Q
    ||||||||||||||||||||||||||||||    
T  55722495 gatgtatcatagaatttgccttatatttat 55722466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 56016864 - 56016796
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||  | ||||||| ||||||||||||   ||||||||||||||||| |||| || |||||    
T  56016864 tttattattaacctaacgacttagtgtaccgatacacacaaatttattggatgtaccataaaaattgcc 56016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3150524 - 3150596
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  3150524 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttaccttat 3150596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 52274058 - 52274121
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaat 64  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  52274058 tttattattaattttacgacttggtgtaccgatacatccaaatttattggatgtaccatagaat 52274121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17376423 - 17376357
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  17376423 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttg 17376357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22821315 - 22821249
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22821315 tttattattaatttaacgacttggtgtaccgatacatccaaatttattggatgtaccatagaatttg 22821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9260155 - 9260228
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttata 74  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||    
T  9260155 tttattattaattttacgacttgatgtaccgatacatccaaattcattgggtgtaccatagaatttgccttata 9260228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 33829206 - 33829275
Alignment:
Q  3 tattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||    
T  33829206 tattattaattttacgacttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcctta 33829275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 33838760 - 33838691
Alignment:
Q  3 tattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctta 72  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||    
T  33838760 tattattaattttacgacttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcctta 33838691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40850091 - 40850022
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||    
T  40850091 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtactatagaatttgcct 40850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46872437 - 46872368
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||||    
T  46872437 tttattattaattttacgacttggtgtaccaatacacccaaatttattgggtgtatcatagaatttgcct 46872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24248141 - 24248209
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||    
T  24248141 tttattattaattttacgacttggtgtaccgatacacccaaatttattagatgtaccatagaatttgcc 24248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27801878 - 27801810
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  27801878 tttattattaattttacgacttggtgtaccgatacatccaaatttattgggtgtacaatagaatttgcc 27801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8569315 - 8569381
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  8569315 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 8569381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14190958 - 14190888
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||| ||||||||||    
T  14190958 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccataaaatttgcctt 14190888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47861065 - 47861131
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||    
T  47861065 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtacgatagaatttg 47861131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7426999 - 7427068
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  7426999 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 7427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25493566 - 25493497
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||    
T  25493566 tttattattaattttacgatttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcct 25493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9223194 - 9223262
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  9223194 tttattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10061225 - 10061157
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||| ||||| |||||||||||||    
T  10061225 tttattattaattttacgacttggtgtactgatacacccaaatttattgaatgtaccatagaatttgcc 10061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43224984 - 43225052
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  43224984 tttattattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48868402 - 48868477
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttatatt 76  Q
    ||||||||||||||||||||||||  |||||||||  |||||||||||||||||| |||||| |||||| ||||||    
T  48868402 tttattattaattttacgacttggaataccgatacacccaaatttattggatgtaccatagactttgccatatatt 48868477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14131690 - 14131756
Alignment:
Q  3 tattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  14131690 tattattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37765593 - 37765662
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| || | ||||||||||||||    
T  37765593 tttattattaattttacgacttagtgcaccgatacatccaaatttattgggtgcaccatagaatttgcct 37765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44647584 - 44647649
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  | |||| ||||||||||    
T  44647584 tttattattaattttacgacttggtgtaccgatacatccaaatttatcaggtgtaccatagaattt 44647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48480918 - 48480849
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| | || ||||||||||||||    
T  48480918 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtataccatagaatttgcct 48480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 49686045 - 49685984
Alignment:
Q  9 taattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  49686045 taattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 49685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52079509 - 52079440
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||||||| ||||| ||| ||||||||||    
T  52079509 tttattattaattttacaacttagtgtaccgatacatccaaatttattgaatgtaccattgaatttgcct 52079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2684079 - 2684011
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||| | |||| |||||||||||||    
T  2684079 tttattattaattttacgacttgatgtatcgatacatccaaatttattaggtgtaccatagaatttgcc 2684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5057267 - 5057199
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  | ||||| ||||| |||| |||||||||||||    
T  5057267 tttattattaattttacgacttggtgtaccgatacacctaaattcattgggtgtaccatagaatttgcc 5057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49739211 - 49739139
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    |||||||||||||| || | |||||||||||||||  |||||||||| ||||||| |||||||||||||||||    
T  49739211 tttattattaatttaacaaattggtgtaccgatacacccaaatttatcggatgtaccatagaatttgccttat 49739139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10635736 - 10635802
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||| | |||| |||||||||||    
T  10635736 tttattattaactttacgacttggtgtaccgatacatccaaaattattaggtgtaccatagaatttg 10635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20280290 - 20280218
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    |||||||||||||| | || |||||||||||||||  |||||||||||| ||||| |||||||||||| ||||    
T  20280290 tttattattaatttaatgaattggtgtaccgatacacccaaatttattgaatgtaccatagaatttgctttat 20280218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27038611 - 27038543
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||| |||||  ||| ||||||||    
T  27038611 tttattattaattttacgacttggtgtaccgatacactcaaatttattgaatgtactataaaatttgcc 27038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29171233 - 29171165
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||| ||||||  ||||||| | ||| |||| |||||||||||||    
T  29171233 tttattattaattttacgacttggtgtatcgatacacccaaattcactgggtgtaccatagaatttgcc 29171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28095087 - 28095156
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||| | || ||||||||||||||   |||||||||||||||||| |||||||||||||||    
T  28095087 tttattattaatttaatgaattggtgtaccgataac-ccaaatttattggatgtaccatagaatttgcctt 28095156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39853025 - 39852959
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||| ||||||  | ||||||||||| ||||  ||||||||||    
T  39853025 tttattattaattttacgacttggtgtatcgatacacctaaatttattgggtgtactatagaatttg 39852959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 41321070 - 41321008
Alignment:
Q  4 attattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaattt 66  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||| |||| | ||||||||    
T  41321070 attattaattttacgacttggtgaaccgatacacccaaatttattgggtgtaccgtagaattt 41321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50502683 - 50502756
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttcc----aaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||    ||||| ||||| ||||||||| |||||||||    
T  50502683 tttattattaattttacgacttggtgtaccgatacacccaattaaattcattgggtgtatcataaaatttgcct 50502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1658879 - 1658948
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||| |||||||||||  | ||||| || |  |||| ||||||||||||||    
T  1658879 tttattattaattttacgacttgatgtaccgatacaccaaaattcatcgagtgtaccatagaatttgcct 1658948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31571308 - 31571341
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgata 34  Q
    ||||||||||||||||||||||||||||||||||    
T  31571308 tttattattaattttacgacttggtgtaccgata 31571341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33234393 - 33234461
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||| |  | |||||||||||||||  ||||||||||||| ||||  | ||||||||||    
T  33234393 tttattattaatttaataaattggtgtaccgatacacccaaatttattgggtgtactacagaatttgcc 33234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35225169 - 35225236
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgc 68  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  35225169 tttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgc 35225236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18870990 - 18870920
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  18870990 tttattattaattttatgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctt 18870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6016143 - 6016212
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||    
T  6016143 tttattattaattttacgacttggtgtaccgatacattcaaatttattgggtgtaccatagaatttgcct 6016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1338921 - 1338853
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  1338921 tttattattaattttatgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcc 1338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32519071 - 32519141
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||| ||||||||||    
T  32519071 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 32519141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9226268 - 9226199
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||||||||    
T  9226268 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcct 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16989451 - 16989524
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttata 74  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| |||| |||| |||||| ||||||    
T  16989451 tttattattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccataaaatttgtcttata 16989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34315461 - 34315530
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    ||||||||||||||||||||||||| |||||||||  | ||||| |||||||||| ||||||||||||||    
T  34315461 tttattattaattttacgacttggtataccgatacacctaaattcattggatgtaccatagaatttgcct 34315530  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26810845 - 26810773
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    ||||||||||||||||||| |||||||||||||||  | ||||||||| | |||| |||||||||| ||||||    
T  26810845 tttattattaattttacgatttggtgtaccgatacacctaaatttattaggtgtaccatagaatttaccttat 26810773  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 24025597 - 24025531
Alignment:
Q  2 ttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||| |||||||||||||||||  ||||||| ||||| |||| |||||||||||||    
T  24025597 ttattattaattttacaacttggtgtaccgatacacccaaattcattgg-tgtaccatagaatttgcc 24025531  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27719343 - 27719377
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  27719343 tttattattaattttacgacttggtgtaccgatac 27719377  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33954520 - 33954486
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  33954520 tttattattaattttacgacttggtgtaccgatac 33954486  T

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Target: scaffold0022 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 166756 - 166826
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcctt 71  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  166756 tttattattaattttacgacttggtgtaccgatacacccaaatttattgaatgtaccatagaatttgcctt 166826  T

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Target: scaffold0239 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15448 - 15380
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  15448 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 15380  T

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Target: scaffold0017 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26981 - 27047
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttg 67  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  26981 tttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 27047  T

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Target: scaffold0121 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13671 - 13602
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||||||||    
T  13671 tttattattaattttacgacttggtgtaccgatacacccaaattcattgggtgtaccatagaatttgcct 13602  T

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Target: scaffold0194 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17832 - 17900
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||||||||| ||||  | |||||||||||||||| |||||||||||||    
T  17832 tttattattaattttacgacttggtgtaccaatacacctaaatttattggatgtaccatagaatttgcc 17900  T

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Target: scaffold0005 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 291691 - 291623
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  291691 tttattattaattttacgatttggtgtaccgatacacccaaatttattgaatgtaccatagaatttgcc 291623  T

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Target: scaffold1999 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1071 - 1003
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcc 69  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||| |||||| |||| ||||||||    
T  1071 tttattattaattttacgacttggagtaccgatacacccaaatttattagatgtaccataaaatttgcc 1003  T

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Target: scaffold0301 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21526 - 21459
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgcct 70  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||| ||||||||||||||    
T  21526 tttattattaattttacgacttggtgtaccgatac-acccaatttattgggtgta-catagaatttgcct 21459  T

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Target: scaffold0493 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 1438 - 1377
Alignment:
Q  12 ttttacgacttggtgtaccgatacttccaaatttattggatgtatcatagaatttgccttat 73  Q
    ||||| ||||||||||||| ||||  ||||||||||||| |||| |||||||||||||||||    
T  1438 ttttatgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatttgccttat 1377  T

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Target: scaffold0349 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8765 - 8799
Alignment:
Q  1 tttattattaattttacgacttggtgtaccgatac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  8765 tttattattaattttacgacttggtgtaccgatac 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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