View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1202_high_26 (Length: 422)
Name: NF1202_high_26
Description: NF1202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1202_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 81 - 328
Target Start/End: Complemental strand, 35417805 - 35417558
Alignment:
| Q |
81 |
attataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctcttgtt |
180 |
Q |
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| T |
35417805 |
attataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctcttgtt |
35417706 |
T |
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| Q |
181 |
ttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaactaaag |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35417705 |
ttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaactaaag |
35417606 |
T |
|
| Q |
281 |
actcccctcaagaacaaaggattctatgttagaatgaaactcatgaac |
328 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35417605 |
actcccctcaagaacaaaggattctatgttagaatgaaactcatgaac |
35417558 |
T |
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