View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1202_high_33 (Length: 349)
Name: NF1202_high_33
Description: NF1202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1202_high_33 |
 | |
|
| [»] scaffold0208 (2 HSPs) |
| | |
|
| [»] scaffold0363 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0208 (Bit Score: 285; Significance: 1e-160; HSPs: 2)
Name: scaffold0208
Description:
Target: scaffold0208; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 30 - 342
Target Start/End: Complemental strand, 10689 - 10377
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10689 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttggtaacactaaagagacaaatttcttaactta |
10590 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10589 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtatcgttaatgtcaccattaag |
10490 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatata |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | |
|
|
| T |
10489 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaatagagtctttcaattaaactaaataga |
10390 |
T |
|
| Q |
330 |
acatttcttttca |
342 |
Q |
| |
|
|| | |||||||| |
|
|
| T |
10389 |
acttctcttttca |
10377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 29422 - 29126
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
29422 |
ctaaattcataattctccataatattatctcaaaaccaaacgagacaattactttatgagaatttgctgtaacactaaagagacaaatttcttaacttac |
29323 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29322 |
aagtggatttcatgactttgcaaactatctactttgtatcaattgacacaaaagttttattcagatgcaccatattgtatcgttaatgtcaccattaaga |
29223 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
29222 |
aacactatattgaaatccatcttatgcagctccaaaattataatcagtaaactagtatcatgactgtcctaatagagtctttcatttaaactaaata |
29126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 285; Significance: 1e-160; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 30 - 342
Target Start/End: Original strand, 10762521 - 10762833
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10762521 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattacttcatgagaatttttggtaacactaaagagacaaatttcttaactta |
10762620 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10762621 |
taagtggatttcatgactttgcaaatcatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
10762720 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatata |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | |
|
|
| T |
10762721 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaatagagtctttcaattaaactaaataga |
10762820 |
T |
|
| Q |
330 |
acatttcttttca |
342 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
10762821 |
acatctcttttca |
10762833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 342
Target Start/End: Original strand, 42193095 - 42193408
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttgg-taacactaaagagacaaatttcttaactt |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
42193095 |
gctaagtccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttgggtaacactaaagagacaaatttcttaactt |
42193194 |
T |
|
| Q |
129 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaa |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
42193195 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcacatgcaccatattgtatcgttaatgtcaccattaa |
42193294 |
T |
|
| Q |
229 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatat |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
42193295 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactttcctaatagagtctttcaattaaactaaatag |
42193394 |
T |
|
| Q |
329 |
aacatttcttttca |
342 |
Q |
| |
|
||| | |||||||| |
|
|
| T |
42193395 |
aacttctcttttca |
42193408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 30 - 327
Target Start/End: Complemental strand, 49155976 - 49155680
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
49155976 |
gctaaatccacaattctccataatattatctcaaaaccaaataaaataattacttaatgagaatttttggtaacac-aaagagacaaatttcttaactta |
49155878 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
49155877 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcaaatgcaccatattgtatcgttaatgtcaccattaag |
49155778 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
49155777 |
aaacactatattgaaatccatcttatgcagctccaaaattataataagcaaactagtatcatgactgtcctaatagagtctttcaatcaaactaaata |
49155680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 30 - 342
Target Start/End: Original strand, 11841608 - 11841920
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11841608 |
gctaaatccacaattctccataatattatctcaaaaccaaacaagacaatcactttatgagaatttgtggcaacactaaagagacaaatttcttaactta |
11841707 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| ||||||| |
|
|
| T |
11841708 |
taagtgggtttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagttgcaccatattgcatcattaatgtcatcattaag |
11841807 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatata |
329 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | || |||||||||| |||||| | |
|
|
| T |
11841808 |
aaacactatattgaaatccatcttatgcagctccaaaattatagtaagcaaactagtatcatgactgtcctaatagagtcattcaattaaattaaataga |
11841907 |
T |
|
| Q |
330 |
acatttcttttca |
342 |
Q |
| |
|
| |||||||||| |
|
|
| T |
11841908 |
atttttcttttca |
11841920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 38450935 - 38451230
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacact-aaagagacaaatttcttaacttat |
130 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||| || |||||||||| ||| |||||||||||||||||||| |
|
|
| T |
38450935 |
taaatccacaactctccataatattatctcaaaaccaaatgagacaattgcttcatgagaatttgtggtaacactaaaaaagacaaatttcttaacttat |
38451034 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||| |||||| |||||||||||| || || |||||| |||||||| |
|
|
| T |
38451035 |
aagtggatttcatgtctttttaaaccatctactttgtatcaattgactc-aaagtttgattcagttgcaccatattgcatcattgatgtcatcattaaga |
38451133 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| ||||| |||||| |||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
38451134 |
aacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaattagtgtcatgactgtcctaatagagtctttcaattacactaaata |
38451230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 10240080 - 10240376
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacact--aaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||| || |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
10240080 |
taaatccacaactctccataatattatctcaaaaccaaatgagacaattggttcatgagaatttgtggtaacactaaaaaaagacaaatttcttaactta |
10240179 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||| | || ||||||| |||||||||||||||||| | ||||||| |||||| |||||||||||| || ||||||||| ||||||| |
|
|
| T |
10240180 |
taagtggatttcatgccgttttaaaccatctactttgtatcaattgactc-aaagtttgattcagttgcaccatattgcatcattaatgtcatcattaag |
10240278 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||| | ||| |||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
10240279 |
aaacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaactagtgtcatgactgtcctaatagagtctttcaattacactaaata |
10240376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 29596672 - 29596825
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaa----gagacaaatttcttaact |
127 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| |||| |||||||| |||||| ||| || | |||||| | || |||| ||||||||||||| |
|
|
| T |
29596672 |
taaatccacacttctccttaaaattatctcaaaacaaaatgagacaattgttttatgtgaatttgtagtaacaattaatagagagaaaaatttcttaact |
29596771 |
T |
|
| Q |
128 |
tataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaa |
181 |
Q |
| |
|
||| || ||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
29596772 |
cgtaaatgaatttcatgactttgcaaaccaacgactttgtatctattgacacaa |
29596825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 32 - 342
Target Start/End: Original strand, 12688045 - 12688355
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttata |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12688045 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttggtaacactaaagagacaaatttcttaacttata |
12688144 |
T |
|
| Q |
132 |
agtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaagaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
12688145 |
agtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtatcgttaatgtcaccattaagaa |
12688244 |
T |
|
| Q |
232 |
acactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatataac |
331 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| |
|
|
| T |
12688245 |
acactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaatagagtctttcaattaaactaaatagaac |
12688344 |
T |
|
| Q |
332 |
atttcttttca |
342 |
Q |
| |
|
| |||||||| |
|
|
| T |
12688345 |
ttctcttttca |
12688355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 30 - 342
Target Start/End: Original strand, 32096077 - 32096389
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
32096077 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttggtaacactaaagagacaaatttcttaactta |
32096176 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
32096177 |
taagtggatttcataactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatcttgtatcgttaatgtcaccattaag |
32096276 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatata |
329 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||| | |
|
|
| T |
32096277 |
aaacactatattaaaatccatcttatgcagctccaaaattataatcagcaaactagtatcatgacggtcataatggagtctttcaattaaactaaataga |
32096376 |
T |
|
| Q |
330 |
acatttcttttca |
342 |
Q |
| |
|
|| | |||||||| |
|
|
| T |
32096377 |
acttctcttttca |
32096389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 30 - 327
Target Start/End: Original strand, 28527248 - 28527544
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28527248 |
gctaaatccacaattctccataatattatctcaaaaccaaataaaataattacttaatgagaatttttggtaacac-aaagagacaaatttcttaactta |
28527346 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
28527347 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcaaatgcaccatattgtatcgttaatgtcaccattaag |
28527446 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
28527447 |
aaacactatattgaaatccatcttatgcagctccaaaattataataagcaaactagtatcatgactgttctaatagagtctttcaatcaaactaaata |
28527544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 33 - 327
Target Start/End: Original strand, 19061588 - 19061882
Alignment:
| Q |
33 |
aaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttataa |
132 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
19061588 |
aaatccacaattttccagaatattatctcaaaaccaaatgagagaattactttatgagaatttttggtaccactaaagagacaaatttcttaacatataa |
19061687 |
T |
|
| Q |
133 |
gtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaagaaa |
232 |
Q |
| |
|
| ||||||||||||||||||||| || |||||||||||||||| || |||| ||||||||| ||||||||||||| || |||||||||||||||||||| |
|
|
| T |
19061688 |
ggggatttcatgactttgcaaactatcaactttgtatcaattgaaacgaaagctttattcagttgcaccatattgtatcattaatgtcaccattaagaaa |
19061787 |
T |
|
| Q |
233 |
cactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
19061788 |
cactatattgaaattcatcttatgcagctccaaaattataataagaaaactattatcatgactgtcctaatagagtctttcaattaaactaaata |
19061882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 41295559 - 41295383
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaatttt-------------ggtaacactaaagagacaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |
|
|
| T |
41295559 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaatcactttatgagttttttttttttttttttttggtaacactaaagagacaa |
41295460 |
T |
|
| Q |
117 |
atttcttaacttataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattca |
193 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41295459 |
atttattaacttataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattca |
41295383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 41293234 - 41293102
Alignment:
| Q |
195 |
atgcaccatattgtgtcgttaatgtcaccattaagaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgac |
294 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
41293234 |
atgcaccatattgtatcgttaatgtcaccattaagaaacactatattgaaatccatcttatgcagctccaaatttataataagcaaactagtatcatgac |
41293135 |
T |
|
| Q |
295 |
tgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||| | ||||||||| |||||||||| |
|
|
| T |
41293134 |
tgtcctaatagagtctttcaatcaaactaaata |
41293102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 342
Target Start/End: Complemental strand, 13460325 - 13460012
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttgg-taacactaaagagacaaatttcttaactt |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13460325 |
gctaagtccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttgggtaacactaaagagacaaatttcttaactt |
13460226 |
T |
|
| Q |
129 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaa |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
13460225 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcacatgcaccatattgtatcgttaatgtcaccattaa |
13460126 |
T |
|
| Q |
229 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatat |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
13460125 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactttcctaatagagtctttcaattaaactaaatag |
13460026 |
T |
|
| Q |
329 |
aacatttcttttca |
342 |
Q |
| |
|
||| | |||||||| |
|
|
| T |
13460025 |
aacttctcttttca |
13460012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 35086540 - 35086835
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
35086540 |
ctaaatccacaactctacttaatattatctcaaaactaaatgagacaattactttatgagaatttgtggtaacactaaagagacaaatttcttaacttat |
35086639 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||| | ||| |||||| || || |||||||||||||| ||| |
|
|
| T |
35086640 |
aagtggatttcatgactttgcaaaccatctactttgtatctaatgacac-aaagttttatgtggttgcgccatatagtatcattaatgtcaccattgaga |
35086738 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| ||||| |||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
35086739 |
aacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaactagcgtcatgactgtcctaatagagtctttcaattacactaaata |
35086835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 23341879 - 23341582
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||| || || |||| || |||||||||||||||||||| |||||||| ||| ||||||| || |||||| ||||||||||||||||||||||||||| |
|
|
| T |
23341879 |
ctaaattcaaaactctctattatattatctcaaaaccaaatgagacaattccttcatgagaatttgtggtaatactaaagagacaaatttcttaacttat |
23341780 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
||||||||||||| | |||||||||| | | ||||||||| ||||||||||||||||| || || ||||||||||||| || ||||||| ||||||| | |
|
|
| T |
23341779 |
aagtggatttcatcagtttgcaaaccttctcctttgtatctattgacacaaaagttttctttagttgcaccatattgtatcattaatgttgccattaaaa |
23341680 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcag-caaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
| |||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
23341679 |
attactatattgacatccatcttatgcaactccaaaattataataagaaaaactagtatcatgactgtcctaatagagtctttcaattatgctaaata |
23341582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 40916077 - 40915995
Alignment:
| Q |
245 |
atccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
40916077 |
atccatcttatgtagcttcaaaactataacaagcaaactagtgtcatgactgtcctaatagagtctttcaattacgctaaata |
40915995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 342
Target Start/End: Original strand, 25383410 - 25383723
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttgg-taacactaaagagacaaatttcttaactt |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25383410 |
gctaagtccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaatttttgggtaacactaaagagacaaatttcttaactt |
25383509 |
T |
|
| Q |
129 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaa |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
25383510 |
ataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcacatgcaccatattgtatcgttaatgtcaccattaa |
25383609 |
T |
|
| Q |
229 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatat |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
25383610 |
gaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactttcctaatagagtctttcaattaaactaaatag |
25383709 |
T |
|
| Q |
329 |
aacatttcttttca |
342 |
Q |
| |
|
||| | |||||||| |
|
|
| T |
25383710 |
aacttctcttttca |
25383723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 30 - 327
Target Start/End: Original strand, 38145737 - 38146034
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
38145737 |
gctaaatccacaattctccataatattatctcaaaagcaaataagacaattactttatgagaatttttgccaacactaaagagacaaatttcttaactta |
38145836 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
38145837 |
taagtggatttcatgaccatgcaaaccgtttaatttgtatcaattgacacaaaagttttattcagatgcaccatattgtatcgttaatgtcaccattaag |
38145936 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
38145937 |
aaacactatattgaaatccatcttatgcagctccaaatttataataagcaaactagtatcatgactgtcctaatagagtctttcaatcaaactaaata |
38146034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 31056342 - 31056046
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagaga-caaatttcttaactta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||| || ||||||||||||| | | |||||||||||||||| |
|
|
| T |
31056342 |
ctaaatccacaattctccataatattatctcaaaactaaatgagacaattgcttcatgagaatttgtggtaacactaaaaaaaacaaatttcttaactta |
31056243 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||| |||| ||||||| ||||||||||||||||| |||| |||| |||||| |||||||||||| || ||||||||| ||||||| |
|
|
| T |
31056242 |
taagtggatttcatgcctttttaaaccatctactttgtatcaattgatccaaa-gtttgattcagttgcaccatattgcatcattaatgtcatcattaag |
31056144 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
31056143 |
aaacactatattgaaatccatcttatgcagttccaaaattataacaatcaaactagtatcatgactgtcctaatagagtctttcatttaaactaaata |
31056046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 15375751 - 15376050
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| ||||||||| |||||||| ||||||||||| | |||||||||| ||||||||||||||||| || || |
|
|
| T |
15375751 |
ctaaatccacaactctccataatactatctctaaaccaaatgagacaattgctttatgagaattcgtggtaacacttaagagacaaatttcttacctcat |
15375850 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
||||||||||||||| ||||| | ||| || |||||||| ||||||||||||||||| || | |||||| |||||| || ||||||| ||||||| | |
|
|
| T |
15375851 |
aagtggatttcatgattttgc--atcatataatttgtatctattgacacaaaagttttctttaattgcaccttattgtatccttaatgttgccattaaaa |
15375948 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataa-----tcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaa |
325 |
Q |
| |
|
| | | |||| ||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
15375949 |
tatattgtattgacatccatcttatgcagctccaaaaatataataagctaagcaaactagtatcatgactgttctaatagagtctttcaattaaactaaa |
15376048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 30 - 326
Target Start/End: Complemental strand, 6101793 - 6101497
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
6101793 |
gctaaatccacaattctccataatattatctcaaaaccaaaagagacaattaccttatgagaatttgtggtaacactaaagagacaaatttcttaactta |
6101694 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
6101693 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagctgcaccatattgtatcattaatgtcaccattaag |
6101594 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaat |
326 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||| | |||||| |||||||||||| |
|
|
| T |
6101593 |
aaacactatattgaaatccatcttatgcaactccaaaattatactaagcaaactagtatcatgattgtcctaatagagtctttcgattaaactaaat |
6101497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 21192752 - 21193048
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
21192752 |
ctaaatccacaactctacttaatattatctcaaaactaaatgagacaattactttatgagaatttgtggtaacactaaagagacaaatttcttaacttat |
21192851 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||| || || | ||||| ||||| ||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
21192852 |
aagtcgatttcatgactttgcaaaccatctactttgtatctatcgatataaaagaattattggattgcaccatattgtatcgttaatgtcgccatcaaga |
21192951 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||| | |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| || |||||||| |
|
|
| T |
21192952 |
tacattgtattgacatccatcttatgcaagtccaaaattataacaagcaaactagtatcatgactgtcttaatatagtctttcaaatatactaaata |
21193048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 21772457 - 21772752
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||| |||| || ||||| ||| ||||||| || ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
21772457 |
ctaaaaccacaactctccataatattatctcaaaactaaatgaggcaattgcttcatgagaatttgtggtaacactaaaaagataaatttcttaacttat |
21772556 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||||||||||||||||| | ||||| | |||||| |||||||||||| || |||| |||| |||||||| |
|
|
| T |
21772557 |
aagtggatttcatgcctttttaaaccatctactttgtatcaattga-tccaaagtctgattcagttgcaccatattgcatcattaacgtcatcattaaga |
21772655 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||||||| ||||||||||||| || | ||||||||||| | ||||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
21772656 |
aacactatattgaaatccatcttatgtagtttcaaaattataacaatcaaactagtatcatgactgtcctaatagagtctttcatttaaactaaata |
21772752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 30 - 327
Target Start/End: Original strand, 32031337 - 32031634
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||| | | || || |||||||||||||||||||||||| |
|
|
| T |
32031337 |
gctaaatccacaattctccataatattatctcaaaaccaaatgagataattgctttacgagaatatgtcctaccaataaagagacaaatttcttaactta |
32031436 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
|||||||||||||||| |||||||| ||| ||||||||||| |||||||||| |||||| || || |||||||||||| || |||||||||||||| || |
|
|
| T |
32031437 |
taagtggatttcatgattttgcaaaacatctactttgtatctattgacacaagagttttcttaagtagcaccatattgtatcattaatgtcaccattgag |
32031536 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||| | ||| |||||||||||| |||| ||||| ||||| ||||||||||| |||||||| |||||||| | ||||||||||| |||||||| |
|
|
| T |
32031537 |
aaacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaactagtgtcatgactatcctaatagagtctttcaattacactaaata |
32031634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 8652676 - 8652971
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaaga-gacaaatttcttaacttat |
130 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||| |||||||| ||| | ||||| || ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
8652676 |
taaatccacaactctccataatattatctcaaaatcaaatgagacaattgcttcaagagaatttgtggtaacactaaaaaagacaaatttcttaacttat |
8652775 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| ||| ||||||| |||||||||||||||||| | ||||||| |||||| |||||||||||| || ||||||||| |||||||| |
|
|
| T |
8652776 |
aagtggatttcatgcttttttaaaccatctactttgtatcaattgactc-aaagtttgattcagttgcaccatattgcatcattaatgtcatcattaaga |
8652874 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
8652875 |
aacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaactagtgtcatgactgtcctaatagagtctttcaattacactaaata |
8652971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 17579964 - 17579760
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||| ||| |||| ||||||||||| | | |||| | |||||||||||||||||||||| | |
|
|
| T |
17579964 |
gctaaatccacaattctccataatattatgtcaaaagcaaatgagataattgctttatgagaatatgtagtaaaaataaagagacaaatttcttaactca |
17579865 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
|||||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||| || || ||||||||||||| || |||||||||||||| || |
|
|
| T |
17579864 |
taagtggatttcatgattttgcaaaacatctactttgtatctattgacacaaaagttttcttaagttgcaccatattgtatcattaatgtcaccattgag |
17579765 |
T |
|
| Q |
230 |
aaaca |
234 |
Q |
| |
|
||||| |
|
|
| T |
17579764 |
aaaca |
17579760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 316
Target Start/End: Complemental strand, 12436756 - 12436687
Alignment:
| Q |
247 |
ccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaat |
316 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| | ||||||||| |
|
|
| T |
12436756 |
ccatcttatgcagctccaaaattataataaacaaactagtatcatgactatcctaatagagtctttcaat |
12436687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 12436831 - 12436753
Alignment:
| Q |
80 |
tactttatgagaaattttggtaacactaaagagacaaatttcttaacttataagtggatttcatgactttgcaaaccat |
158 |
Q |
| |
|
||||||||||||| || ||||| || ||||||||||||||||||||| ||||||| |||| |||||||| |||||||| |
|
|
| T |
12436831 |
tactttatgagaatttgtggtagcaataaagagacaaatttcttaacacataagtgcattttatgacttttcaaaccat |
12436753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 30 - 327
Target Start/End: Original strand, 5544037 - 5544346
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaatttt------------ggtaacactaaagagacaaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
5544037 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaatcactttatgagattttttttttttttttttggtaacactaaagagacaaa |
5544136 |
T |
|
| Q |
118 |
tttcttaacttataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaat |
217 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
5544137 |
tttattaacttataagtggatttcatgactttgcaaaccattttctttgtatcaattgacacaaaagttttattcatatgcaccatattgtatcgttaat |
5544236 |
T |
|
| Q |
218 |
gtcaccattaagaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaatt |
317 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
5544237 |
gtcaccattaagaaacactatattgaaatccatcttatgcagctccaaatttataataagcaaactagtatcatgactgtcctaatagagtctttcaatc |
5544336 |
T |
|
| Q |
318 |
aaactaaata |
327 |
Q |
| |
|
|||||||||| |
|
|
| T |
5544337 |
aaactaaata |
5544346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 32895311 - 32895015
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
32895311 |
ctaaatccacaactctacttaatattatctcaaaactaaatgagacaattactttatgagaatttgtggtaacactaaagagacaaatttcttaacttat |
32895212 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| | | ||| || ||| || || |||||||||||||| ||| |
|
|
| T |
32895211 |
aagtggatttcatgactttgcaaaccatctactttgtatctaatgacacaaagtttttttgtggttgcgccgtatagtatcattaatgtcaccattgaga |
32895112 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| ||||| |||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
32895111 |
aacaatgcattgacatccatcttatgtagcttcaaaactataacaagcaaactagcgtcatgactgtcctaatagagtctttcaattacactaaata |
32895015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 30 - 323
Target Start/End: Original strand, 39729108 - 39729401
Alignment:
| Q |
30 |
gctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||| |||| ||| |||| ||||||||||| | | |||||| ||||||||| |||||||||||| | |
|
|
| T |
39729108 |
gctaaatccgcaattctccataatatcatctcaaaacaaaatgagataattgctttatgagaatatgtagtaacaataaagagactaatttcttaactca |
39729207 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| || || ||||||||||||| || |||||||||||||| || |
|
|
| T |
39729208 |
taagtggatttcatgactttgcaaaacatctactttgtatctattgacacaaaagttttcttaagttgcaccatattgtatcattaatgtcaccattgag |
39729307 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaacta |
323 |
Q |
| |
|
||| | | |||| |||||||||||| |||| ||||| ||||| ||||||||||| ||||||||| | ||||| | ||||||||||| |||| |
|
|
| T |
39729308 |
aaaaaatgtattgacatccatcttatgtagcttcaaaactataacaagcaaactagtgtcatgactgccgtaatagagtctttcaattacacta |
39729401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 58 - 330
Target Start/End: Complemental strand, 14414235 - 14413963
Alignment:
| Q |
58 |
tctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttataagtggatttcatgactttgcaaacca |
157 |
Q |
| |
|
|||||||| ||||| ||| |||||||||||||||| | | |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
14414235 |
tctcaaaatcaaatgagataattactttatgagaatatgtagtaacaataaagagacaaatttcttaactcataagtggatttcatgattttgcaaaaca |
14414136 |
T |
|
| Q |
158 |
tttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaagaaacactatattataatccatcttatgc |
257 |
Q |
| |
|
| ||||||||||| |||||||||| |||||| || || |||||||||||| || |||||||||||||| ||||||| | ||| |||||||||||| |
|
|
| T |
14414135 |
tctactttgtatctattgacacaagagttttcttaagttgcaccatattgaatcattaatgtcaccattgagaaacaatgcattgacatccatcttatgt |
14414036 |
T |
|
| Q |
258 |
agctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatataa |
330 |
Q |
| |
|
|||| ||||| ||||| || |||||||| | ||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
14414035 |
agcttcaaaactataacaagtaaactagtgttatgactgtcctaatagagtctttcaattacactaaatataa |
14413963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 10704236 - 10704107
Alignment:
| Q |
199 |
accatattgtgtcgttaatgtcaccattaagaaacactatattataa-tccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgt |
297 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10704236 |
accatattgtatcattaatgtcaccattaagaaacactatatttgaaatccatcttatgcagctccaaaagtataatcagcaaactagtatcatgactgt |
10704137 |
T |
|
| Q |
298 |
cctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||| | |||||||||||||||||||| |
|
|
| T |
10704136 |
cctaatagagtctttcaattaaactaaata |
10704107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 30413515 - 30413387
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggt-aacactaaagagacaaatttcttaactta |
129 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||||| ||||| |||||||||||||||||||| || |||| |||| ||| ||| ||||||||||||| | |
|
|
| T |
30413515 |
ctaaattcacaattctacttaatattatctcaaaatcaaatgagacaattactttatgagaatttgtggtaaacattaactagaaaaatttcttaactca |
30413416 |
T |
|
| Q |
130 |
taagtggatttcatgactttgcaaaccat |
158 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
30413415 |
taagtggatttcatgactttacaaaccat |
30413387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 4347365 - 4347446
Alignment:
| Q |
245 |
atccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||||||||||| |||| ||||||||||| || |||||| ||||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
4347365 |
atccatcttatgtagcttcaaaattataaa-agaaaactaatatcatgactgtcctaatatagtctttcgattaaactaaata |
4347446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 35149864 - 35150160
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| |
|
|
| T |
35149864 |
ctaaatccacaattctccataatattatcttaaaaccaaatgagacaattactttatgagaatttgtggtaacaataaagagacaaattttttaacttat |
35149963 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||| |
|
|
| T |
35149964 |
aagtggatttcatgatgttgcaaaccatctaatttgtatcaattgacacaaaagttttattcagttgcaccatattgtatcattaatgtcatcattaaga |
35150063 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||| |
|
|
| T |
35150064 |
aacactatattgaaattcatcttatgcagcttcaaaattataataagcaaactagtatcatgactatcctaatagagtctttcaaataaactaaata |
35150160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 3813032 - 3813331
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagaga----caaatttcttaac |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||| || ||||||||| ||| | | ||||||||||||| |
|
|
| T |
3813032 |
ctaaatccacaattctccataatattatctcaaaactaaatgagacaattgcttcatgagaatttgtggtaacacaaaaaaaaaaaacaaatttcttaac |
3813131 |
T |
|
| Q |
127 |
ttataagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccatt |
226 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| ||||||||||||||||| |||| |||| |||||| |||||||||||| || ||||||||| |||| |
|
|
| T |
3813132 |
ttataagtggatttcatgcctttttaaaccatctactttgtatcaattgatccaaa-gtttgattcagttgcaccatattgcatcattaatgtcatcatt |
3813230 |
T |
|
| Q |
227 |
aagaaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaat |
326 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| | ||||||| ||||||||||| |
|
|
| T |
3813231 |
aagaaacactatattgaaatccatcttatgcagttccaaaattataacaatcaaactagtatcatgactgtcctaatagagtctttcatttaaactaaat |
3813330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 350120 - 349825
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||| || || ||| |||||||||||||||||||||||||||||| |
|
|
| T |
350120 |
ctaaatccacaactctacttaatattatctcaaaactaaatgagacaattactttatgacaatttgtgggaacactaaagagacaaatttcttaacttat |
350021 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||| | ||| || ||| || || |||||||||||||| ||| |
|
|
| T |
350020 |
aagtggatttcatgactttgcaaaccatctactttgtatctaatgacac-aaagttttatgtggttgcgccgtatagtatcattaatgtcaccattgaga |
349922 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| ||| |||||||| |||| ||||| ||||| |||||||||| ||||||||| ||||||| | ||||||||||| |||||||| |
|
|
| T |
349921 |
aacaatgcattgacatctatcttatgtagcttcaaaactataacaagcaaactagcgtcatgactgccctaatagagtctttcaattacactaaata |
349825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 48165473 - 48165178
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||| || | |||||||||||||||||||||| |||||||| |
|
|
| T |
48165473 |
ctaaatccacaactctacttaatattatctcaaaaccaaacgagacaattactttatgagaatttgttgtaacactaaagagacaaattttttaacttac |
48165374 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| ||||||||| |||||| || ||||||||||||| || |||||||||||||||||| |
|
|
| T |
48165373 |
aagtggatttcatgactttgcaaactatctactttgtatcaattaacacaaaagctttatttagttgcaccatattgtatcattaatgtcaccattaaga |
48165274 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
48165273 |
aa-accatattgaaatccatcttatgcagctccaaaattataataagcaaactagtatcatgactatcctaatgaagtctttcaattaaactaaata |
48165178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 5187117 - 5186820
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | || || ||||||||||||||||||||||||||||||| || |
|
|
| T |
5187117 |
ctaaatccacaattcttcataatattatctcaaaaccaaatgagacaattactttatcaaaatttatggtaacactaaagagacaaatttcttaactcat |
5187018 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttac-tttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaag |
229 |
Q |
| |
|
||||||||| ||||| |||||||| ||| ||| ||| ||||||||||||| |||||||| ||||| ||||||||||||| || ||||||| ||||||| |
|
|
| T |
5187017 |
aagtggattacatgattttgcaaatcatctacttttatatcaattgacacgaaagttttcttcagttgcaccatattgtatcattaatgttgtcattaag |
5186918 |
T |
|
| Q |
230 |
aaacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||| |||| | |||||||||||| |||| |||| ||||||| |||||| |||||||||||||||||||||| | |||||| ||||||| ||||| |
|
|
| T |
5186917 |
aaacactgtattgtcatccatcttatgtagctacaaagttataataagcaaattagtatcatgactgtcctaatagagtctttcgattaaaccaaata |
5186820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 26959001 - 26959296
Alignment:
| Q |
31 |
ctaaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttat |
130 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||| |||||||| ||| ||||||| || |||||| |||||| |||||||||||||||||||| |
|
|
| T |
26959001 |
ctaaatccacaactctccataatattatctcaaaactaaatgagacaattgcttcatgagaatttgtggtaatactaaaaagacaaatttcttaacttat |
26959100 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||| |||||||||| | ||||||| |||||| |||||||||||| || ||||||||| |||||||| |
|
|
| T |
26959101 |
aagtggatttcatgcctttttaaaccatctactttatatcaattga-tccaaagtttgattcagttgcaccatattgcatcattaatgtcatcattaaga |
26959199 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| | ||||||| |||| ||||||| |
|
|
| T |
26959200 |
aacactatattgaaatccatcttatgcagttccaaaattataacaatcaaactagtatcatgactgtcctaatagagtctttcatttaagctaaata |
26959296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 10735219 - 10735514
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaaga-gacaaatttcttaacttat |
130 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
10735219 |
taaattcacaactctccatactattatctcaaaaccaaatgagacaattgcttcatgagaatttgtggtaacactaaaaaagacaaatttcttaacttat |
10735318 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||| |||||| |||||||||||| || ||||||||| ||| |||| |
|
|
| T |
10735319 |
aagtggatttcatgcctttttaaaccatctactttgtatcaattgactc-aaagtttgattcagttgcaccatattgcatcattaatgtcatcatgaaga |
10735417 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
10735418 |
aacaatgcattgacatccatcttatgtagcttcaaaactataataagcaaactagtgtcatgactgtcctaatagagtctttcaattacactaaata |
10735514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 10948988 - 10949283
Alignment:
| Q |
32 |
taaatccacaattctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaaga-gacaaatttcttaacttat |
130 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
10948988 |
taaattcacaactctccatactattatctcaaaaccaaatgagacaattgcttcatgagaatttgtggtaacactaaaaaagacaaatttcttaacttat |
10949087 |
T |
|
| Q |
131 |
aagtggatttcatgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaaga |
230 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||| |||||| |||||||||||| || ||||||||| ||| |||| |
|
|
| T |
10949088 |
aagtggatttcatgcctttttaaaccatctactttgtatcaattgactc-aaagtttgattcagttgcaccatattgcatcattaatgtcatcatgaaga |
10949186 |
T |
|
| Q |
231 |
aacactatattataatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaata |
327 |
Q |
| |
|
|||| | ||| |||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
10949187 |
aacaatgcattgacatccatcttatgtagcttcaaaactataataagcaaactagtgtcatgactgtcctaatagagtctttcaattacactaaata |
10949283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 330
Target Start/End: Complemental strand, 32283002 - 32282719
Alignment:
| Q |
44 |
tctccataatattatctcaaaaccaaataagacaattactttatgagaaattttggtaacact-aaagagacaaatttcttaacttataagtggatttca |
142 |
Q |
| |
|
|||||| |||||||||| |||| ||| |||||||||| |||||| || || || ||| ||| ||| |||| || ||||||||| ||||||| ||| | |
|
|
| T |
32283002 |
tctccacaatattatcttaaaa--aaaatagacaattaccttatgaaaatttgtgttaaaacttaaatagactaacttcttaactcataagtgtattcta |
32282905 |
T |
|
| Q |
143 |
tgactttgcaaaccatttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaagaaacactatatta |
242 |
Q |
| |
|
| ||||||||||| || |||||||| | |||| ||||| ||||||| | ||||||||||||| || |||| ||| |||||||||| | | |||| |
|
|
| T |
32282904 |
ttactttgcaaactatatactttgtgtatattgtcacaat-gttttatctggttgcaccatattgt-tcattaacgtcgacattaagaaatattgtattg |
32282807 |
T |
|
| Q |
243 |
taatccatcttatgcagctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatataa |
330 |
Q |
| |
|
|||||||||||| || ||||||||||| | |||||||||||||| | |||||||||||||||||| ||||| || |||||||| |
|
|
| T |
32282806 |
acatccatcttatgtgcttctaaaattataataaacaaactagtatcattattgtcctaataaaatctttaaattatacgaaatataa |
32282719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 58 - 330
Target Start/End: Original strand, 4476 - 4748
Alignment:
| Q |
58 |
tctcaaaaccaaataagacaattactttatgagaaattttggtaacactaaagagacaaatttcttaacttataagtggatttcatgactttgcaaacca |
157 |
Q |
| |
|
|||||||| ||||| ||| |||||||||||||||| | | |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
4476 |
tctcaaaatcaaatgagataattactttatgagaatatgtagtaacaataaagagacaaatttcttaactcataagtggatttcatgattttgcaaaaca |
4575 |
T |
|
| Q |
158 |
tttactttgtatcaattgacacaaaagttttattcagatgcaccatattgtgtcgttaatgtcaccattaagaaacactatattataatccatcttatgc |
257 |
Q |
| |
|
| ||||||||||| |||||||||| |||||| || || |||||||||||| || |||||||||||||| ||||||| | ||| |||||||||||| |
|
|
| T |
4576 |
tctactttgtatctattgacacaagagttttcttaagttgcaccatattgaatcattaatgtcaccattgagaaacaatgcattgacatccatcttatgt |
4675 |
T |
|
| Q |
258 |
agctccaaaattataatcagcaaactagtatcatgactgtcctaataaaatctttcaattaaactaaatataa |
330 |
Q |
| |
|
|||| ||||| ||||| || |||||||| | ||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
4676 |
agcttcaaaactataacaagtaaactagtgttatgactgtcctaatagagtctttcaattacactaaatataa |
4748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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