View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1202_low_17 (Length: 549)

Name: NF1202_low_17
Description: NF1202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1202_low_17
NF1202_low_17
[»] chr4 (2 HSPs)
chr4 (98-540)||(55330539-55330981)
chr4 (98-536)||(55335971-55336415)
[»] chr2 (17 HSPs)
chr2 (109-520)||(8375852-8376263)
chr2 (98-520)||(8405612-8406037)
chr2 (109-520)||(8395535-8395949)
chr2 (109-449)||(8411743-8412083)
chr2 (109-449)||(8433841-8434181)
chr2 (347-512)||(8431120-8431285)
chr2 (105-449)||(8416823-8417164)
chr2 (360-520)||(8439091-8439251)
chr2 (363-449)||(8417215-8417301)
chr2 (168-279)||(8403726-8403837)
chr2 (342-520)||(8403900-8404078)
chr2 (122-184)||(8430907-8430969)
chr2 (218-279)||(8368103-8368164)
chr2 (218-279)||(8401246-8401307)
chr2 (218-279)||(8422823-8422884)
chr2 (109-160)||(8401365-8401416)
chr2 (233-279)||(8431018-8431064)
[»] scaffold1738 (1 HSPs)
scaffold1738 (109-184)||(20-95)


Alignment Details
Target: chr4 (Bit Score: 431; Significance: 0; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 98 - 540
Target Start/End: Original strand, 55330539 - 55330981
Alignment:
Q  98 ctcagaaacatttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaaca 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55330539 ctcagaaacatttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaaca 55330638  T
Q  198 gtctcttccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcaccta 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55330639 gtctcttccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcaccta 55330738  T
Q  298 atgaaccagccattaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgc 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55330739 atgaaccagccattaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcagttgc 55330838  T
Q  398 taaactcttgttaacctttaatgctatatttccaagtctttcataatcttcaatatctttctttttcacaacttcaataacttctctcaattccttttct 497  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55330839 taaactcttattaacctttaatgctatatttccaagtctttcataatcttcaatatctttcattttcacaacttcaataacttctctcaattccttttct 55330938  T
Q  498 aattcctcactccatccattattactatttttcttcttcatct 540  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55330939 aattcctcactccatccattattactatttttcttcttcatct 55330981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 98 - 536
Target Start/End: Original strand, 55335971 - 55336415
Alignment:
Q  98 ctcagaaacatttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaaca 197  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||| ||| |||||||||||  | || ||||||||||| || | |||    |||| |    
T  55335971 ctcagaaacacttcttcctaacatcaatgccattttcatttcaaatatctcaccattttctcttttttccaaatctttctcctcaagtgtgctttcaata 55336070  T
Q  198 gtctcttccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcaccta 297  Q
     ||||| | |||| |||||  ||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||| |||| | | ||  | | |    
T  55336071 ctctctccaaacatcttaaaaaatccaccacagtttctatacatttcaaacaccataccaacttgtccaccatgctcaaaaccattgattgcacaagcca 55336170  T
Q  298 atgaaccagccattaaagcaactatagctgcaacagaatt-------gtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccag 390  Q
     ||| || ||||| | ||  || ||||||| | || |||        |||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  55336171 ttgatcctgccatcacaggtaccatagctg-accaaaatccgtcgtcgtttcctacaaatgcagaacctattgctgcaattccagtgagtaatggacctg 55336269  T
Q  391 caattgctaaactcttgttaacctttaatgctatatttccaagtctttcataatcttcaatatctttctttttcacaacttcaataacttctctcaattc 490  Q
    | ||||| | ||||||||||| ||| |||||||||||||||||||| ||||| |||||||| |||||  | || ||||||||||||||||| |||| |||    
T  55336270 ctattgccatactcttgttaatcttcaatgctatatttccaagtctctcatagtcttcaatgtctttactctttacaacttcaataacttccctcatttc 55336369  T
Q  491 cttttctaattcctcactccatccattattactatttttcttcttc 536  Q
    | |||||||||| |||||||||||||| |||||||||||| |||||    
T  55336370 catttctaattcttcactccatccatttttactatttttcctcttc 55336415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 5e-42; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 109 - 520
Target Start/End: Complemental strand, 8376263 - 8375852
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctcttccaa 208  Q
    ||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||| |||| |||  |||||  |    ||| |     
T  8376263 ttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgaatcaattgaagtttctat 8376164  T
Q  209 cagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaaccagcc 308  Q
    ||  || | ||| |||||| ||  ||||||||||||||| ||||| |||| |||||||||||| ||||||| ||| | ||||| | | ||||||||||||    
T  8376163 caagttgaagaaaccaccagaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaattacagaagccaatgaaccagcc 8376064  T
Q  309 attaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactcttgt 408  Q
    |  | || ||| | ||| || | ||||    | ||||||||||  || || |||||||||||||| ||||| ||||| || |||||||| ||||||||||    
T  8376063 aaaagaggaacaaaagcagccaaagaaccactacctacaaatgtcgatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgt 8375964  T
Q  409 taacctttaatgctatatttccaagtctttcataatcttcaatatctttctttttcacaacttcaataacttctctcaattccttttctaattcctcact 508  Q
    | ||||| |||||||| ||||||||||| ||||||||||||   |||||  | || |  ||||||| |||||| |||| |||| |||| ||||| | |||    
T  8375963 ttaccttcaatgctatgtttccaagtctgtcataatcttcagcgtcttttctctttatcacttcaacaacttccctcatttccatttccaattctttact 8375864  T
Q  509 ccatccattatt 520  Q
    ||| ||||||||    
T  8375863 ccacccattatt 8375852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 98 - 520
Target Start/End: Original strand, 8405612 - 8406037
Alignment:
Q  98 ctcagaaacatttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaaca 197  Q
    |||||| ||| ||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||| |||| |||   ||||      
T  8405612 ctcagatacacttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaatt 8405711  T
Q  198 gtctcttccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcaccta 297  Q
    |    ||| ||||  || |  || ||| || ||  ||||||||||||||| ||||| |||| |||||||||||||||||||| ||| | | ||| | | |    
T  8405712 gaagtttctaacaagttgaaaaaaccagcagaagctctatacatttcaaaaaccatgccaacttgtccaccatgttcaaaagtattgattgcagaagcca 8405811  T
Q  298 atgaaccagccattaaagcaactatagctgcaacagaattg---tttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaat 394  Q
    ||||||||||||  | || ||| |  || || | |||| |    || || | ||||| ||| || |||||||||||||| ||||| ||||| || |||||    
T  8405812 atgaaccagccaagagaggaacaaatgcagccaaagaactaccattgccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaat 8405911  T
Q  395 tgctaaactcttgttaacctttaatgctatatttccaagtctttcataatcttcaatatctttctttttcacaacttcaataacttctctcaattccttt 494  Q
    ||| ||||||||||| ||||| || ||||| ||||||||||| ||||||||||||   |||||   ||| || || |||| |||||| |||| |||| ||    
T  8405912 tgccaaactcttgtttaccttcaaagctatgtttccaagtctgtcataatcttcagcgtcttttcgttttaccacgtcaacaacttccctcatttccatt 8406011  T
Q  495 tctaattcctcactccatccattatt 520  Q
    || ||||| |||||||||||||||||    
T  8406012 tccaattcttcactccatccattatt 8406037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 520
Target Start/End: Complemental strand, 8395949 - 8395535
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctcttccaa 208  Q
    ||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||| |||| |||   ||||  |    ||| |     
T  8395949 ttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctat 8395850  T
Q  209 cagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaaccagcc 308  Q
    ||  || |  || ||| || ||  ||||||||||||||| ||||| ||||||||||||||||||||||||| ||| | | ||| | | ||||||||||||    
T  8395849 caagttgaataaaccatcagaagctctatacatttcaaaaaccatgccaatttgtccaccatgttcaaaagtatttattgcagaagccaatgaaccagcc 8395750  T
Q  309 attaaagcaactatagctgcaacagaattg---tttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactct 405  Q
    |  | || ||| |  || || | |||| |    || || | ||||| ||| || |||||||||||||| ||||| ||||| || |||||||| |||||||    
T  8395749 aagagaggaacaaatgcagccaaagaactaccattgccaataaatgtagatccaatagctgcaattcctgtgagcaatggccctgcaattgccaaactct 8395650  T
Q  406 tgttaacctttaatgctatatttccaagtctttcataatcttcaatatctttctttttcacaacttcaataacttctctcaattccttttctaattcctc 505  Q
    |||| ||||| || ||||| ||||||||||| ||||||||||||   |||||   ||| || || |||| |||||| |||| |||| |||| ||||| ||    
T  8395649 tgtttaccttcaaagctatgtttccaagtctgtcataatcttcagcgtcttttcgttttaccacgtcaacaacttccctcatttccatttccaattcttc 8395550  T
Q  506 actccatccattatt 520  Q
    |||||||||||||||    
T  8395549 actccatccattatt 8395535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 449
Target Start/End: Original strand, 8411743 - 8412083
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctcttccaa 208  Q
    ||||||||||   |||||||||||||| |||||||| |||||||||||||||  |||| |||||||||||| |||| |||   ||||  |    ||| ||    
T  8411743 ttcttcccaatcgcaaagccattttcaattcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctaa 8411842  T
Q  209 cagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaaccagcc 308  Q
    ||  || |  || ||| || ||  ||||||||||||||| ||||| |||| |||||||||||| ||||||| ||| ||  ||| | | |||||||||| |    
T  8411843 caagttgaaaaaaccagcagaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagtc 8411942  T
Q  309 attaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactcttgt 408  Q
    | || || ||| |  || || | |||| | || |||||||||| ||| || || ||||||||||| ||||||||||| || |||||||| ||||||||||    
T  8411943 aatagaggaacaaatgcagccaaagaactattgcctacaaatgtagatccaattgctgcaattcctgtgagtaatggccctgcaattgccaaactcttgt 8412042  T
Q  409 taacctttaatgctatatttccaagtctttcataatcttca 449  Q
    | ||||| || ||||| ||||||||||| ||||||||||||    
T  8412043 ttaccttcaacgctatgtttccaagtctgtcataatcttca 8412083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 449
Target Start/End: Original strand, 8433841 - 8434181
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctcttccaa 208  Q
    ||||||||||   |||||||||||||| |||||||| |||||||||||||||  |||| |||||||||||| |||| |||   ||||  |    ||| ||    
T  8433841 ttcttcccaatcgcaaagccattttcaattcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagtttctaa 8433940  T
Q  209 cagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaaccagcc 308  Q
    ||  || |  || ||| || ||  ||||||||||||||| ||||| |||| |||||||||||| ||||||| ||| ||  ||| | | |||||||||| |    
T  8433941 caagttgaaaaaaccagcagaagctctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaacagcagaagccaatgaaccagtc 8434040  T
Q  309 attaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactcttgt 408  Q
    | || || ||| |  || || | |||| | || |||||||||| ||| || || ||||||||||| ||||||||||| || |||||||| ||||||||||    
T  8434041 aatagaggaacaaatgcagccaaagaactattgcctacaaatgtagatccaattgctgcaattcctgtgagtaatggccctgcaattgccaaactcttgt 8434140  T
Q  409 taacctttaatgctatatttccaagtctttcataatcttca 449  Q
    | ||||| || ||||| ||||||||||| ||||||||||||    
T  8434141 ttaccttcaacgctatgtttccaagtctgtcataatcttca 8434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 512
Target Start/End: Original strand, 8431120 - 8431285
Alignment:
Q  347 aaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactcttgttaacctttaatgctatatttccaagtctttcataatct 446  Q
    ||||| ||| ||||||||||||||||| | ||||||||| || |||||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||||    
T  8431120 aaatgtagatcctatagctgcaattcctgagagtaatggccctgcaattgccaaactcttgtttaccttcaatgctatgtttccaagtctatcataatct 8431219  T
Q  447 tcaatatctttctttttcacaacttcaataacttctctcaattccttttctaattcctcactccat 512  Q
    ||||  |||||  | || |  ||||||| ||| || |||| |||| |||||||||| |||||||||    
T  8431220 tcaacgtcttttctctttatcacttcaacaacatccctcatttccatttctaattcttcactccat 8431285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 449
Target Start/End: Original strand, 8416823 - 8417164
Alignment:
Q  105 acatttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaatgtttcatcaacagtctctt 204  Q
    ||||||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||| |||| |||   ||||  |    ||    
T  8416823 acatttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaaagttgattcaattgaagttt 8416922  T
Q  205 ccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaagcattcactacagcacctaatgaacc 304  Q
    | ||||  || |  || |||||| ||   || ||||||||||| ||||| |||| |||||||||||| ||||||| ||| ||| ||| | | ||||||||    
T  8416923 ctaacaagttga-aaaaccaccagaa--gctctacatttcaaaaaccatgccaacttgtccaccatgctcaaaagtattaactgcagaagccaatgaacc 8417019  T
Q  305 agccattaaagcaactatagctgcaacagaattgtttcctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactc 404  Q
    ||||| || || ||| |  || || | |||    || |||| ||||| ||| || ||||| |||||||| ||||||||||| || |||||||||||||||    
T  8417020 agccaatagaggaacaaaggcagccaaagagccattgcctataaatgtagatccaatagcggcaattcctgtgagtaatggccctgcaattgctaaactc 8417119  T
Q  405 ttgttaacctttaatgctatatttccaagtctttcataatcttca 449  Q
    ||||  ||||| || ||||| |||||||| || | ||||||||||    
T  8417120 ttgtctaccttcaaagctatgtttccaagcctgttataatcttca 8417164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 520
Target Start/End: Original strand, 8439091 - 8439251
Alignment:
Q  360 atagctgcaattccagtgagtaatggaccagcaattgctaaactcttgttaacctttaatgctatatttccaagtctttcataatcttcaatatctttct 459  Q
    |||||||||||||| ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||||||||   |||||      
T  8439091 atagctgcaattcctgtgagcaatggccctgcaattgccaaactcttgtttaccttcaatgctatgtttccaagtctgtcataatcttcagcgtcttttc 8439190  T
Q  460 ttttcacaacttcaataacttctctcaattccttttctaattcctcactccatccattatt 520  Q
    | || |  ||||||| |||||| |||| |||| |||| ||||| | |||||| ||||||||    
T  8439191 tctttatcacttcaacaacttccctcatttccatttccaattctttactccacccattatt 8439251  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 8417215 - 8417301
Alignment:
Q  363 gctgcaattccagtgagtaatggaccagcaattgctaaactcttgttaacctttaatgctatatttccaagtctttcataatcttca 449  Q
    ||||||||||| ||||||||||| || |||||||| ||||||||||| ||||| || ||||| ||||||||||| ||||||||||||    
T  8417215 gctgcaattcctgtgagtaatggccctgcaattgccaaactcttgtttaccttcaacgctatgtttccaagtctgtcataatcttca 8417301  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 8403726 - 8403837
Alignment:
Q  168 aaatctttctcttccaatgtttcatcaacagtctcttccaacagcttaaggaatccaccacaatttctatacatttcaaataccataccaatttgtccac 267  Q
    |||||||||||||| |   |||| ||||| ||||||||||| |||| ||  ||||||||||| ||||||||||| ||||| |||||||||| |||||| |    
T  8403726 aaatctttctcttcaataatttcttcaactgtctcttccaaaagctcaaaaaatccaccacagtttctatacatctcaaacaccataccaacttgtcctc 8403825  T
Q  268 catgttcaaaag 279  Q
    |||| |||||||    
T  8403826 catgctcaaaag 8403837  T

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Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 520
Target Start/End: Original strand, 8403900 - 8404078
Alignment:
Q  342 cctacaaatgcagaacctatagctgcaattccagtgagtaatggaccagcaattgctaaactcttgttaacctttaatgctatatttccaagtctttcat 441  Q
    ||||||||||  || ||||||||||||||||| || |  || || ||   |||||||||||||||||||| ||||||||| ||||| || | ||| ||||    
T  8403900 cctacaaatgatgaccctatagctgcaattcctgttaacaaaggtcctaaaattgctaaactcttgttaatctttaatgcaatattccctaatctctcat 8403999  T
Q  442 aatcttcaatatctttctttttcacaacttcaataacttctctcaattccttttctaattcctcactccatccattatt 520  Q
    |||| |||||||||||  | ||||| |||||||| || ||  ||| ||| ||||| || |||  | |||||||||||||    
T  8404000 aatcctcaatatcttttctcttcaccacttcaattacctccttcatttcattttccaactccaaattccatccattatt 8404078  T

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Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8430907 - 8430969
Alignment:
Q  122 caaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaa 184  Q
    ||||||||| ||||||||||||| |||||||||||||||  |||| |||||||||||| ||||    
T  8430907 caaagccatcttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaa 8430969  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 8368103 - 8368164
Alignment:
Q  218 gaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaag 279  Q
    |||||||||||||  ||||||||||||| | |||||||||| |||||||||||| |||||||    
T  8368103 gaatccaccacaagctctatacatttcagaaaccataccaacttgtccaccatgctcaaaag 8368164  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 8401307 - 8401246
Alignment:
Q  218 gaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaag 279  Q
    |||||||||||||  ||||||||||||| | |||||||||| |||||||||||| |||||||    
T  8401307 gaatccaccacaagctctatacatttcagaaaccataccaacttgtccaccatgctcaaaag 8401246  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 8422884 - 8422823
Alignment:
Q  218 gaatccaccacaatttctatacatttcaaataccataccaatttgtccaccatgttcaaaag 279  Q
    |||||||||||||  ||||||||||||| | |||||||||| |||||||||||| |||||||    
T  8422884 gaatccaccacaagctctatacatttcagaaaccataccaacttgtccaccatgctcaaaag 8422823  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 8401416 - 8401365
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctct 160  Q
    ||||||||||  ||||||||| ||| ||||||||||| ||||||||||||||    
T  8401416 ttcttcccaatttcaaagccaatttaatttcaaataaatctccattttctct 8401365  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 8431018 - 8431064
Alignment:
Q  233 tctatacatttcaaataccataccaatttgtccaccatgttcaaaag 279  Q
    ||||||||||||||| ||||| |||| |||||||||||| |||||||    
T  8431018 tctatacatttcaaaaaccatgccaacttgtccaccatgctcaaaag 8431064  T

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Target: scaffold1738 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold1738
Description:

Target: scaffold1738; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 95 - 20
Alignment:
Q  109 ttcttcccaacatcaaagccattttcatttcaaataactctccattttctctcatctcaaaatctttctcttccaa 184  Q
    ||||||||||   ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||| ||||    
T  95 ttcttcccaattgcaaagccattttcatttcaaatagctctccattttctcttttctctaaatctttctctcccaa 20  T

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