View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1202_low_42 (Length: 343)

Name: NF1202_low_42
Description: NF1202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1202_low_42
NF1202_low_42
[»] chr5 (50 HSPs)
chr5 (184-343)||(17088250-17088402)
chr5 (176-277)||(39698565-39698671)
chr5 (175-277)||(31084347-31084448)
chr5 (176-315)||(37328775-37328916)
chr5 (178-315)||(19579688-19579829)
chr5 (177-275)||(21542056-21542159)
chr5 (176-277)||(7677729-7677835)
chr5 (176-230)||(21576685-21576739)
chr5 (176-277)||(35017061-35017162)
chr5 (176-276)||(14873542-14873641)
chr5 (174-235)||(19820326-19820389)
chr5 (176-275)||(21522776-21522880)
chr5 (176-275)||(21533342-21533446)
chr5 (179-230)||(39268541-39268592)
chr5 (174-277)||(19552474-19552578)
chr5 (178-229)||(21190998-21191049)
chr5 (169-246)||(32766865-32766947)
chr5 (177-277)||(3966527-3966632)
chr5 (83-120)||(17088470-17088507)
chr5 (176-224)||(17123119-17123166)
chr5 (178-230)||(23015926-23015978)
chr5 (180-275)||(36642696-36642795)
chr5 (176-242)||(43564929-43565000)
chr5 (175-225)||(4105329-4105379)
chr5 (249-341)||(14674231-14674321)
chr5 (180-230)||(30183625-30183675)
chr5 (175-229)||(42893426-42893480)
chr5 (169-230)||(16304359-16304420)
chr5 (175-212)||(22423763-22423800)
chr5 (178-275)||(43001826-43001922)
chr5 (176-212)||(10298633-10298669)
chr5 (176-228)||(17593663-17593715)
chr5 (226-315)||(21351889-21351977)
chr5 (178-230)||(24238603-24238655)
chr5 (176-224)||(38464313-38464361)
chr5 (176-274)||(11685966-11686068)
chr5 (178-225)||(21351852-21351899)
chr5 (176-226)||(2419936-2419986)
chr5 (176-226)||(2436980-2437030)
chr5 (177-266)||(6401533-6401627)
chr5 (188-230)||(15382550-15382592)
chr5 (176-230)||(21194063-21194117)
chr5 (176-230)||(30098402-30098456)
chr5 (178-242)||(30502330-30502399)
chr5 (178-242)||(30542673-30542742)
chr5 (176-225)||(39695951-39695999)
chr5 (225-273)||(8044263-8044311)
chr5 (176-220)||(15884052-15884096)
chr5 (176-212)||(24906252-24906288)
chr5 (249-277)||(33178049-33178077)
[»] chr4 (56 HSPs)
chr4 (179-277)||(28084546-28084640)
chr4 (177-274)||(3947702-3947798)
chr4 (175-242)||(42640577-42640644)
chr4 (176-277)||(19482692-19482798)
chr4 (176-230)||(23292926-23292980)
chr4 (169-230)||(715538-715599)
chr4 (169-230)||(752864-752925)
chr4 (177-277)||(30982808-30982913)
chr4 (175-230)||(29205533-29205588)
chr4 (177-277)||(4383391-4383484)
chr4 (177-230)||(14465006-14465059)
chr4 (178-227)||(22440559-22440608)
chr4 (175-226)||(24343582-24343633)
chr4 (176-230)||(3064868-3064922)
chr4 (176-241)||(8423658-8423728)
chr4 (180-277)||(27706110-27706212)
chr4 (176-222)||(28964188-28964234)
chr4 (176-225)||(18513175-18513224)
chr4 (181-273)||(30838238-30838335)
chr4 (181-237)||(3712458-3712514)
chr4 (176-224)||(11596297-11596345)
chr4 (176-224)||(16184902-16184950)
chr4 (176-245)||(53381530-53381605)
chr4 (177-224)||(5922532-5922579)
chr4 (176-242)||(16073442-16073513)
chr4 (175-230)||(34306743-34306798)
chr4 (175-230)||(36635395-36635450)
chr4 (175-229)||(18966575-18966629)
chr4 (176-277)||(24613630-24613736)
chr4 (225-275)||(51701284-51701334)
chr4 (176-213)||(5775304-5775341)
chr4 (171-242)||(12895209-12895285)
chr4 (178-277)||(19312359-19312463)
chr4 (173-213)||(28470447-28470487)
chr4 (175-223)||(37203324-37203372)
chr4 (178-241)||(482185-482248)
chr4 (176-219)||(40784029-40784072)
chr4 (175-230)||(49431091-49431146)
chr4 (176-230)||(5414101-5414155)
chr4 (176-230)||(12884347-12884401)
chr4 (176-277)||(22234819-22234925)
chr4 (176-226)||(23386228-23386277)
chr4 (176-230)||(35161101-35161155)
chr4 (215-273)||(40742619-40742677)
chr4 (175-265)||(50280919-50281008)
chr4 (176-225)||(30094083-30094132)
chr4 (176-213)||(30299011-30299048)
chr4 (176-213)||(30327879-30327916)
chr4 (225-262)||(53490747-53490784)
chr4 (175-242)||(2361914-2361986)
chr4 (249-277)||(6485618-6485646)
chr4 (177-225)||(17425348-17425396)
chr4 (176-212)||(18844423-18844459)
chr4 (178-230)||(28000672-28000724)
chr4 (207-276)||(35723353-35723418)
chr4 (177-225)||(40965341-40965389)
[»] chr7 (50 HSPs)
chr7 (175-277)||(24339666-24339773)
chr7 (176-277)||(5409771-5409871)
chr7 (176-277)||(2334274-2334379)
chr7 (176-277)||(9778524-9778624)
chr7 (176-277)||(32093954-32094055)
chr7 (176-277)||(43027404-43027504)
chr7 (176-230)||(598273-598327)
chr7 (181-275)||(13770717-13770810)
chr7 (180-242)||(40287306-40287368)
chr7 (178-277)||(26033392-26033496)
chr7 (178-242)||(29998974-29999038)
chr7 (176-226)||(7133212-7133262)
chr7 (176-277)||(7438730-7438836)
chr7 (176-230)||(29763129-29763183)
chr7 (176-225)||(6490786-6490835)
chr7 (177-230)||(32287404-32287457)
chr7 (225-277)||(9408317-9408369)
chr7 (225-273)||(11272569-11272617)
chr7 (176-228)||(14729770-14729822)
chr7 (175-242)||(21880200-21880272)
chr7 (183-226)||(18215144-18215187)
chr7 (176-230)||(1433524-1433578)
chr7 (176-230)||(15680874-15680928)
chr7 (176-230)||(17852065-17852119)
chr7 (176-230)||(21864873-21864927)
chr7 (176-226)||(40131939-40131989)
chr7 (177-277)||(32308144-32308249)
chr7 (176-216)||(3991392-3991432)
chr7 (233-277)||(18039023-18039067)
chr7 (177-229)||(20549857-20549909)
chr7 (176-271)||(25822685-25822785)
chr7 (176-212)||(35862034-35862070)
chr7 (176-227)||(11738151-11738202)
chr7 (180-277)||(27229244-27229346)
chr7 (176-242)||(29812598-29812658)
chr7 (176-226)||(30813866-30813916)
chr7 (176-226)||(41229237-41229287)
chr7 (175-220)||(5307331-5307376)
chr7 (199-275)||(6028651-6028732)
chr7 (179-220)||(8842282-8842323)
chr7 (177-277)||(11665370-11665475)
chr7 (232-277)||(21560527-21560572)
chr7 (176-225)||(24105748-24105797)
chr7 (176-213)||(28973881-28973918)
chr7 (176-225)||(35749957-35750006)
chr7 (181-226)||(43250073-43250118)
chr7 (176-224)||(1401094-1401142)
chr7 (225-273)||(11831460-11831508)
chr7 (225-277)||(15902846-15902898)
chr7 (173-225)||(38804486-38804538)
[»] chr6 (56 HSPs)
chr6 (176-277)||(10339054-10339161)
chr6 (176-277)||(8365448-8365554)
chr6 (176-277)||(16766721-16766827)
chr6 (175-277)||(9107298-9107405)
chr6 (176-277)||(17327590-17327690)
chr6 (177-341)||(17841530-17841686)
chr6 (177-277)||(31384944-31385048)
chr6 (176-277)||(10770607-10770709)
chr6 (178-275)||(12696350-12696446)
chr6 (175-277)||(8714004-8714111)
chr6 (199-277)||(9522915-9522998)
chr6 (175-230)||(34595199-34595254)
chr6 (176-230)||(8776908-8776962)
chr6 (176-230)||(28152163-28152217)
chr6 (226-275)||(21395292-21395341)
chr6 (177-230)||(31959215-31959268)
chr6 (176-224)||(13360313-13360361)
chr6 (176-275)||(17435225-17435329)
chr6 (176-242)||(4877991-4878061)
chr6 (175-277)||(5970036-5970143)
chr6 (171-222)||(7378052-7378103)
chr6 (179-226)||(9025448-9025495)
chr6 (176-266)||(18367871-18367966)
chr6 (199-242)||(34172241-34172284)
chr6 (176-245)||(7248414-7248488)
chr6 (179-225)||(8389411-8389457)
chr6 (176-225)||(7938170-7938219)
chr6 (176-225)||(9629464-9629513)
chr6 (178-219)||(26178620-26178661)
chr6 (176-209)||(32511606-32511639)
chr6 (176-212)||(426478-426514)
chr6 (176-212)||(2117139-2117175)
chr6 (175-304)||(3209379-3209519)
chr6 (179-242)||(32978842-32978910)
chr6 (171-219)||(34446647-34446695)
chr6 (176-224)||(34894968-34895016)
chr6 (228-275)||(16111743-16111790)
chr6 (176-210)||(7723199-7723233)
chr6 (179-240)||(7996325-7996387)
chr6 (179-240)||(8022414-8022476)
chr6 (176-214)||(8805524-8805562)
chr6 (175-277)||(10842556-10842653)
chr6 (188-242)||(16388175-16388228)
chr6 (188-230)||(21044826-21044868)
chr6 (188-230)||(21068084-21068126)
chr6 (176-230)||(28715360-28715414)
chr6 (227-277)||(33340370-33340420)
chr6 (227-277)||(35125678-35125728)
chr6 (176-264)||(10294144-10294237)
chr6 (178-210)||(5569834-5569866)
chr6 (176-212)||(5732474-5732510)
chr6 (175-239)||(7625173-7625236)
chr6 (183-242)||(7930353-7930413)
chr6 (176-212)||(10649371-10649407)
chr6 (238-315)||(17302543-17302620)
chr6 (225-277)||(26562713-26562765)
[»] chr2 (46 HSPs)
chr2 (176-277)||(37419767-37419873)
chr2 (173-275)||(11223790-11223896)
chr2 (175-265)||(26769547-26769642)
chr2 (176-277)||(30717459-30717565)
chr2 (175-277)||(32749753-32749860)
chr2 (176-273)||(35056896-35056998)
chr2 (175-243)||(28412409-28412477)
chr2 (175-277)||(34784910-34785017)
chr2 (178-242)||(2438661-2438730)
chr2 (177-230)||(28596534-28596587)
chr2 (174-341)||(37558939-37559098)
chr2 (176-229)||(38117099-38117152)
chr2 (176-229)||(42511322-42511375)
chr2 (178-277)||(15657888-15657992)
chr2 (183-242)||(21624315-21624374)
chr2 (181-277)||(23058389-23058477)
chr2 (176-230)||(18840953-18841007)
chr2 (175-230)||(24009360-24009415)
chr2 (177-219)||(3444827-3444869)
chr2 (176-230)||(21782744-21782798)
chr2 (175-225)||(24975254-24975304)
chr2 (176-230)||(27084334-27084388)
chr2 (175-277)||(29367282-29367379)
chr2 (176-230)||(34993922-34993976)
chr2 (176-230)||(41843511-41843565)
chr2 (176-277)||(44635522-44635612)
chr2 (177-274)||(44860347-44860449)
chr2 (176-225)||(18631351-18631400)
chr2 (225-273)||(4882679-4882727)
chr2 (173-276)||(17776612-17776720)
chr2 (178-241)||(19942314-19942382)
chr2 (175-225)||(10535684-10535734)
chr2 (189-227)||(12224291-12224329)
chr2 (176-222)||(15907851-15907897)
chr2 (176-230)||(15972938-15972992)
chr2 (180-226)||(37411188-37411234)
chr2 (176-225)||(15909570-15909619)
chr2 (177-277)||(27286222-27286327)
chr2 (176-213)||(34221463-34221500)
chr2 (176-224)||(6180790-6180838)
chr2 (176-224)||(18622673-18622721)
chr2 (176-212)||(19536361-19536397)
chr2 (177-213)||(23354582-23354618)
chr2 (178-226)||(23354926-23354973)
chr2 (237-277)||(33153448-33153488)
chr2 (176-212)||(39323321-39323357)
[»] chr1 (65 HSPs)
chr1 (176-277)||(47989521-47989627)
chr1 (178-266)||(17778581-17778670)
chr1 (178-277)||(1486646-1486744)
chr1 (176-277)||(6427488-6427594)
chr1 (176-277)||(15449170-15449267)
chr1 (176-271)||(40917779-40917879)
chr1 (176-336)||(18556385-18556548)
chr1 (176-277)||(25361910-25362012)
chr1 (176-277)||(31694639-31694745)
chr1 (176-277)||(32461393-32461498)
chr1 (176-230)||(37598896-37598950)
chr1 (175-275)||(34712322-34712416)
chr1 (175-277)||(5944307-5944414)
chr1 (176-226)||(2218297-2218347)
chr1 (176-230)||(9828120-9828174)
chr1 (180-226)||(48040418-48040464)
chr1 (176-229)||(18337395-18337448)
chr1 (188-275)||(6612112-6612204)
chr1 (178-225)||(42359391-42359438)
chr1 (179-275)||(21038109-21038202)
chr1 (176-340)||(46348323-46348479)
chr1 (176-225)||(15765828-15765877)
chr1 (176-277)||(22515827-22515922)
chr1 (173-213)||(35919223-35919263)
chr1 (178-225)||(16297223-16297270)
chr1 (176-227)||(34741915-34741965)
chr1 (175-307)||(1704934-1705056)
chr1 (176-230)||(1815322-1815376)
chr1 (176-230)||(5898206-5898260)
chr1 (176-277)||(16164244-16164350)
chr1 (176-222)||(16812629-16812675)
chr1 (176-222)||(21365992-21366038)
chr1 (176-214)||(35702542-35702580)
chr1 (176-226)||(46940748-46940798)
chr1 (175-242)||(52903297-52903366)
chr1 (176-221)||(6574051-6574096)
chr1 (176-229)||(19562556-19562608)
chr1 (176-225)||(29144320-29144369)
chr1 (177-230)||(40258874-40258927)
chr1 (177-225)||(10233326-10233374)
chr1 (176-220)||(22881567-22881611)
chr1 (176-212)||(22947813-22947849)
chr1 (175-223)||(23531733-23531781)
chr1 (181-229)||(26830653-26830701)
chr1 (176-275)||(30173691-30173795)
chr1 (176-220)||(36878541-36878585)
chr1 (225-277)||(44482254-44482306)
chr1 (175-230)||(17831461-17831516)
chr1 (176-266)||(25934651-25934746)
chr1 (176-219)||(27965940-27965983)
chr1 (176-304)||(51410022-51410144)
chr1 (176-226)||(113362-113412)
chr1 (225-275)||(5376483-5376533)
chr1 (176-230)||(9690213-9690267)
chr1 (177-226)||(10577676-10577725)
chr1 (176-229)||(18190048-18190101)
chr1 (176-277)||(20157284-20157385)
chr1 (176-213)||(30359447-30359484)
chr1 (171-212)||(38078596-38078637)
chr1 (176-212)||(7918154-7918190)
chr1 (176-212)||(9630561-9630597)
chr1 (249-277)||(14359529-14359557)
chr1 (249-277)||(22881623-22881651)
chr1 (176-224)||(40747707-40747755)
chr1 (176-212)||(48450550-48450586)
[»] scaffold0003 (2 HSPs)
scaffold0003 (175-277)||(241618-241725)
scaffold0003 (176-226)||(236914-236964)
[»] scaffold0136 (1 HSPs)
scaffold0136 (176-277)||(3778-3884)
[»] scaffold0019 (1 HSPs)
scaffold0019 (176-277)||(71749-71855)
[»] chr8 (50 HSPs)
chr8 (176-277)||(22652000-22652106)
chr8 (176-277)||(15816058-15816164)
chr8 (176-277)||(29510233-29510339)
chr8 (176-277)||(22197671-22197777)
chr8 (175-277)||(29447468-29447575)
chr8 (176-277)||(8343340-8343446)
chr8 (180-230)||(5813657-5813707)
chr8 (176-242)||(8343020-8343086)
chr8 (176-230)||(18407784-18407838)
chr8 (177-277)||(29447040-29447145)
chr8 (225-277)||(2572039-2572091)
chr8 (176-264)||(21465449-21465542)
chr8 (176-225)||(30067968-30068017)
chr8 (178-230)||(3025616-3025668)
chr8 (175-230)||(26902103-26902158)
chr8 (225-264)||(27067283-27067322)
chr8 (176-246)||(34450961-34451036)
chr8 (176-230)||(11803335-11803389)
chr8 (188-230)||(22943301-22943343)
chr8 (181-219)||(31109463-31109501)
chr8 (176-226)||(36450694-36450744)
chr8 (176-226)||(39820498-39820547)
chr8 (176-221)||(17751730-17751775)
chr8 (176-221)||(17760717-17760762)
chr8 (176-277)||(24858036-24858135)
chr8 (178-230)||(926730-926782)
chr8 (178-226)||(44067596-44067644)
chr8 (178-229)||(20679337-20679388)
chr8 (176-211)||(31514938-31514973)
chr8 (174-225)||(40064032-40064083)
chr8 (179-230)||(40332256-40332307)
chr8 (176-230)||(3951476-3951530)
chr8 (176-230)||(4298830-4298882)
chr8 (175-229)||(12570437-12570491)
chr8 (175-229)||(12570663-12570717)
chr8 (176-230)||(14134764-14134818)
chr8 (226-264)||(24764809-24764847)
chr8 (175-213)||(25566912-25566950)
chr8 (176-277)||(28745522-28745628)
chr8 (174-211)||(11927013-11927050)
chr8 (175-220)||(13436909-13436954)
chr8 (232-277)||(24362192-24362237)
chr8 (232-277)||(25566865-25566910)
chr8 (176-225)||(27213595-27213644)
chr8 (174-222)||(11944749-11944797)
chr8 (176-224)||(13397622-13397670)
chr8 (176-276)||(16641909-16642008)
chr8 (178-218)||(16987990-16988030)
chr8 (249-277)||(20873093-20873121)
chr8 (177-213)||(24613604-24613640)
[»] chr3 (51 HSPs)
chr3 (176-265)||(41961579-41961673)
chr3 (176-277)||(27505270-27505370)
chr3 (176-277)||(34185052-34185158)
chr3 (176-315)||(55401062-55401194)
chr3 (178-277)||(4987222-4987326)
chr3 (176-276)||(17276750-17276846)
chr3 (176-277)||(14209137-14209243)
chr3 (177-273)||(14216920-14217021)
chr3 (177-273)||(14223049-14223150)
chr3 (176-239)||(8101892-8101955)
chr3 (168-226)||(11610578-11610636)
chr3 (178-277)||(28918025-28918120)
chr3 (177-277)||(34910341-34910435)
chr3 (176-230)||(10955017-10955074)
chr3 (175-230)||(20503530-20503585)
chr3 (171-226)||(25074864-25074919)
chr3 (176-227)||(40052380-40052431)
chr3 (176-242)||(40993275-40993346)
chr3 (200-277)||(14832123-14832205)
chr3 (176-277)||(28812539-28812645)
chr3 (175-277)||(14829713-14829821)
chr3 (177-230)||(15999951-16000004)
chr3 (178-242)||(25775557-25775624)
chr3 (181-225)||(1509637-1509681)
chr3 (174-230)||(18427014-18427070)
chr3 (226-277)||(1509563-1509614)
chr3 (176-273)||(15796223-15796325)
chr3 (176-226)||(21211363-21211413)
chr3 (176-230)||(35223003-35223057)
chr3 (176-277)||(49651716-49651821)
chr3 (176-277)||(55212987-55213092)
chr3 (176-225)||(4466540-4466589)
chr3 (176-212)||(4990912-4990948)
chr3 (177-229)||(8789489-8789541)
chr3 (175-211)||(8842413-8842449)
chr3 (175-227)||(9800119-9800171)
chr3 (238-315)||(14747548-14747625)
chr3 (172-212)||(21861658-21861698)
chr3 (178-246)||(24204983-24205051)
chr3 (171-226)||(3163966-3164021)
chr3 (175-230)||(14223787-14223841)
chr3 (176-219)||(14979225-14979268)
chr3 (175-273)||(16789040-16789142)
chr3 (176-226)||(2408590-2408640)
chr3 (243-277)||(10268487-10268521)
chr3 (175-229)||(11252042-11252096)
chr3 (174-224)||(33359826-33359876)
chr3 (176-226)||(52369856-52369906)
chr3 (177-230)||(15864898-15864950)
chr3 (177-230)||(32804485-32804538)
chr3 (177-225)||(1389908-1389956)
[»] scaffold0086 (1 HSPs)
scaffold0086 (176-277)||(2952-3058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (175-277)||(8563-8670)
[»] scaffold0057 (1 HSPs)
scaffold0057 (176-274)||(24052-24155)
[»] scaffold0793 (1 HSPs)
scaffold0793 (169-230)||(4814-4875)
[»] scaffold0380 (1 HSPs)
scaffold0380 (176-230)||(8666-8720)
[»] scaffold0171 (1 HSPs)
scaffold0171 (176-277)||(23535-23641)
[»] scaffold0361 (1 HSPs)
scaffold0361 (173-230)||(14592-14649)
[»] scaffold0475 (1 HSPs)
scaffold0475 (171-219)||(3384-3432)
[»] scaffold0053 (1 HSPs)
scaffold0053 (175-230)||(8863-8918)
[»] scaffold0008 (1 HSPs)
scaffold0008 (178-276)||(263303-263406)
[»] scaffold0652 (1 HSPs)
scaffold0652 (177-242)||(403-473)
[»] scaffold0223 (1 HSPs)
scaffold0223 (234-277)||(20196-20239)
[»] scaffold0123 (1 HSPs)
scaffold0123 (175-277)||(44453-44560)
[»] scaffold0044 (1 HSPs)
scaffold0044 (183-277)||(53204-53303)
[»] scaffold0512 (1 HSPs)
scaffold0512 (176-230)||(4976-5030)
[»] scaffold0004 (1 HSPs)
scaffold0004 (177-275)||(92833-92940)
[»] scaffold0027 (1 HSPs)
scaffold0027 (176-211)||(46741-46776)
[»] scaffold0103 (1 HSPs)
scaffold0103 (172-226)||(51892-51946)
[»] scaffold0021 (1 HSPs)
scaffold0021 (176-230)||(2978-3032)
[»] scaffold0020 (1 HSPs)
scaffold0020 (176-226)||(135263-135313)
[»] scaffold0011 (2 HSPs)
scaffold0011 (175-224)||(17541-17590)
scaffold0011 (249-277)||(17756-17784)
[»] scaffold0306 (1 HSPs)
scaffold0306 (178-230)||(13471-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (178-230)||(21804-21856)
[»] scaffold0128 (1 HSPs)
scaffold0128 (177-225)||(32774-32822)
[»] scaffold0007 (1 HSPs)
scaffold0007 (178-246)||(225199-225267)


Alignment Details
Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 17088402 - 17088250
Alignment:
Q  184 cacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtgannnnnn 283  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||          
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttt 17088303  T
Q  284 ncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgcttcatagat 343  Q
     |||||||||||||||||| |||| |       |||||||||||||||||||||||||||    
T  17088302 tcaaattattagatgtgtcagtgtgt-------ccctgtcagtatcagtgcttcatagat 17088250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 39698671 - 39698565
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||| |     |||||||||||||||||||||| ||||||||||||||||||| |||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  271 tatgtga 277  Q
    |||||||    
T  39698571 tatgtga 39698565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 31084448 - 31084347
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||   |||||||||||  |||||||||||||||| | |||||||    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgt-cgtgtccgacacgacatcgacacttgtaattacattgaattatg 31084350  T
Q  275 tga 277  Q
    |||    
T  31084349 tga 31084347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 37328775 - 37328916
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac---gtgtccgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    |||||||||||||||||||||| ||||| |||| |||| || |||||| |   |||||||||||||||||||||  ||||| |||||||||||| ||||     
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgcatcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattt 37328874  T
Q  273 tgtgannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    |||||       ||||||||| | |||||||||||||||||||    
T  37328875 tgtga-tttttacaaattatttgctgtgtcggtgtatcagtgt 37328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 19579829 - 19579688
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    ||||| |||| ||||||||| ||||||||||||||| ||||  ||||     |||||||||||| |||||||||  ||||||||||||| ||||||||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaatta 19579730  T
Q  273 tgtgannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    |||||       ||||||||||| |||||||| ||||||||||    
T  19579729 tgtga-ttttctcaaattattagctgtgtcggcgtatcagtgt 19579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 21542159 - 21542056
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||| ||||||||| ||||  |||| |||||||||| ||||||||||||||||     ||||||||||||||||  |||||||||||||||||| ||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 21542060  T
Q  272 atgt 275  Q
    ||||    
T  21542059 atgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 7677835 - 7677729
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggac-----acgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||||| ||| |||||| ||||||||||||||| |||||||||     ||||||| |||||||||||||||  ||||||| ||||| |||| |||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  271 tatgtga 277  Q
    |||||||    
T  7677735 tatgtga 7677729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 21576685 - 21576739
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtc 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 35017162 - 35017061
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| |||||||||||||||  ||| ||||||||| || | || ||||||||| |  | | | |||||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtgcccaatactgacacgacactatcccatataattacactaaattatgt 35017063  T
Q  276 ga 277  Q
    ||    
T  35017062 ga 35017061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 14873641 - 14873542
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||  |   |||||| ||||  ||||| | |||||||||||||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt-tgcgtccgacatgacaccgacacatataattacactaaattatgt 14873543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 19820326 - 19820389
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca--cgtgtccgaca 235  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||    
T  19820326 ttctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggacagtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 21522880 - 21522776
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||| |||||||||||| |  ||||||||||||||| ||| ||||||||||||     ||||||||||||||||  |||| ||||||||||||| |||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  271 tatgt 275  Q
    |||||    
T  21522780 tatgt 21522776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 21533446 - 21533342
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||| |||||||||||| |  ||||||||||||||| ||| ||||||||||||     ||||||||||||||||  |||| ||||||||||||| |||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  271 tatgt 275  Q
    |||||    
T  21533346 tatgt 21533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 39268541 - 39268592
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtc 39268592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 19552474 - 19552578
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgg---acacgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||   |||| |||| |||||||||||||||  ||||||| ||  |||||| |||    
T  19552474 ttctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggacaacacttgtctgacaccgacacgacatcgacacttata--tacacttaat 19552571  T
Q  271 tatgtga 277  Q
    |||||||    
T  19552572 tatgtga 19552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 21190998 - 21191049
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgt 21191049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 32766865 - 32766947
Alignment:
Q  169 taatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgaca 246  Q
    ||||| ||||||||||||||||||||||| |||||| ||| |||  ||||||||||||||||     ||||||||||||||||    
T  32766865 taataatctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgaca 32766947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 3966632 - 3966527
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||||||||| |||||| ||||||||  ||| ||||||     ||||||||||| |||||||||  ||||| | |||||||||| ||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  272 atgtga 277  Q
     |||||    
T  3966532 gtgtga 3966527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 17088507 - 17088470
Alignment:
Q  83 agcatagggaggcatagatcatgcaaatcacagttatc 120  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17088507 agcatagggaggcatagatcatgcaaatcacagttatc 17088470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 17123166 - 17123119
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggaca 17123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 23015926 - 23015978
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||| ||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtc 23015978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 36642696 - 36642795
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||     ||||||||||||| ||| ||||  ||||||| || |||||||||| ||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatg 36642794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 43565000 - 43564929
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||||||||||| ||| ||||||||||||||| | ||||||||     ||||||||||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 4105379 - 4105329
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||| |||||||||||||||||| |||||||||||||||||| || |||||    
T  4105379 tctacgaagcacggacactcctcggattaggcgtgtcccagtatcagacac 4105329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 14674321 - 14674231
Alignment:
Q  249 gacacttgtaattacactaaattatgtgannnnnnncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgcttcatag 341  Q
    |||||||||||||||||||||||||||||       ||||||||||| |||||||| || ||||||| || |||| ||||| |||||||||||    
T  14674321 gacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgt-ccgtgtctgtatccgtgcttcatag 14674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 30183675 - 30183625
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||| |||||| |||  |||||||||||||||||||||||||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtc 30183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 42893480 - 42893426
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||||| |||||||||||  |||||||||||||  |||||||||||||||    
T  42893480 tctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgt 42893426  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 16304359 - 16304420
Alignment:
Q  169 taatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||| |||||||||||||||| ||||| |||||| |||||| | ||||||| ||||||||    
T  16304359 taatatactatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtc 16304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 22423763 - 22423800
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22423763 tctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 43001922 - 43001826
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||| ||||||||||||||  ||||  ||||||||| ||   |||||||  ||   ||||||||||||||||| ||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgt-cgtgtccgacacatcaccaacacttgtaattacactgaattatgt 43001826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 17593663 - 17593715
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtg 228  Q
    |||||||| ||||||||||||| ||||| ||||||||| |||| |||||||||    
T  17593663 ctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 21351889 - 21351977
Alignment:
Q  226 gtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtgannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    ||||| |||||||||| ||||  |||||||||||||||||| ||||||||||       | ||||||||| ||||||||||| |||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttcc-aattattagttgtgtcggtgtgtcagtgt 21351977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 24238603 - 24238655
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||  ||||| || ||||||||||| |||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtc 24238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 11686068 - 11685966
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||||||||||||||||||||||| |||| |   || | |||||     ||||||||||||||| ||||||  ||||| | ||||||||||||||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaat 11685970  T
Q  271 tatg 274  Q
    ||||    
T  11685969 tatg 11685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 21351852 - 21351899
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||||||    
T  21351852 atgaagcacggacactcttcggattagacgtgttccagtgtcggacac 21351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 2419986 - 2419936
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||||||| || ||||||| ||||||| | ||||||||||    
T  2419986 ctatgaagcacggacactcatcggattaggtgtgtcccggggtcggacacg 2419936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 2437030 - 2436980
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||| ||||||||| |||||||||||||   ||||||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacg 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 6401627 - 6401533
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacact 266  Q
    ||||||||||||||||||||  ||| |||||| |||| ||||| ||||     |||||||||||| |||||||||  ||||| | ||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacact 6401533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 15382592 - 15382550
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||| ||||||||||||||| |||||||||| |||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtc 15382550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 21194063 - 21194117
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||| |||| |||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtc 21194117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 30098456 - 30098402
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||| ||||| ||||||| ||||||  ||||| ||||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtc 30098402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 30502330 - 30502399
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||| ||| ||||  |||||||| |||||||||||||||||     ||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 30542673 - 30542742
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||| ||| ||||  |||||||| |||||||||||||||||     ||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 39695951 - 39695999
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||| |||||||||  ||||||||||||||| |||||||||||    
T  39695951 ctatgaagcaccgacactcctaggattaggcgtgtccc-gtgtcggacac 39695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 8044263 - 8044311
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    ||||||||||||||||||||||   |||||||||||| || ||||||||    
T  8044263 cgtgtccgacaccgacacgacataaacacttgtaattccattaaattat 8044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 15884096 - 15884052
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    ||||||| ||| |||||||||| |||||||||||| |||||||||    
T  15884096 ctatgaaacacagacactcctcggattaggcgtgttccagtgtcg 15884052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 24906252 - 24906288
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    ||||||||||||||||||||||  |||||||||||||    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgtcc 24906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 33178077 - 33178049
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  33178077 gacacttgtaattacactaaattatgtga 33178049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 28084640 - 28084546
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    |||||||||||||  |||||||||||||||| | ||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgt----caccgacacgacacagacacttgtaattacattgaattatgtga 28084546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 3947702 - 3947798
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||||||| ||   ||||||||||| ||||||||||||||||||| |||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgt-cgtgtccgacacgacactgacacttgtaattacactgaattatg 3947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 42640644 - 42640577
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||| ||||||||||||||||||||||||    
T  42640644 tctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtccgacaccgacac 42640577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 19482798 - 19482692
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||     | | ||||||||||||   ||||||||||||||||  |||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaat 19482699  T
Q  271 tatgtga 277  Q
    |||||||    
T  19482698 tatgtga 19482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 23292926 - 23292980
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 715538 - 715599
Alignment:
Q  169 taatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  715538 taataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 715599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 752864 - 752925
Alignment:
Q  169 taatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  752864 taataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 752925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 30982808 - 30982913
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtcc-----gacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    |||||||||||||||||| |  ||||||||||||||| ||||||||||||||||      |||||||||||||||  ||||||| |||||||||| || |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  272 atgtga 277  Q
    ||||||    
T  30982908 atgtga 30982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 29205588 - 29205533
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  29205588 tctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtc 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 4383484 - 4383391
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtg 276  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||      |||  ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtccg-gtgtcg------tgtttgacaccgacacgacactgacatttgtaattacactgaattatgtg 4383392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 14465006 - 14465059
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtc 14465059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 24343633 - 24343582
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  24343633 tctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacg 24343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 3064868 - 3064922
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtc 3064922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 8423658 - 8423728
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgaca 241  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||     |||||||||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 27706110 - 27706212
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtg-----tccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    |||||||| ||| ||||| ||||||||||||||| || ||||| |||||     |||||||   |||||||| | |||||||||||||||||||||||||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatg 27706209  T
Q  275 tga 277  Q
    |||    
T  27706210 tga 27706212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28964188 - 28964234
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcgga 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 18513175 - 18513224
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 30838335 - 30838238
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt-----gtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    ||||||||||||||||| | |||||||||||   |||||||||||||     ||||||||| |||||||||  || |||| |||||||||||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattat 30838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 3712458 - 3712514
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacacc 237  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||| | |||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgtctacgacacc 3712514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 16184950 - 16184902
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 53381530 - 53381605
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac------gtgtccgacaccgacacgac 245  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||| ||      ||||||||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacacgac 53381605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 16073513 - 16073442
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||| ||||||||||| |||||||||||||  |||||||||||     ||||||||||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacac 16073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 34306743 - 34306798
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||| ||| ||||| ||||||||||||| | ||||||||||||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtc 34306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 36635450 - 36635395
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||| || ||||||||||||||| ||||| ||| ||||||    
T  36635450 tctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtc 36635395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 18966629 - 18966575
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||||||||||||||||  |||||||||| ||||  ||||||||||||||    
T  18966629 tctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgt 18966575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 24613630 - 24613736
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||  |||||| |||||||  ||||| ||||     |||||| |||||||||| ||||  |||||||||| ||||| | |||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  271 tatgtga 277  Q
    |||||||    
T  24613730 tatgtga 24613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 51701334 - 51701284
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||| |||||||||||||||| | ||||||||||||||||| ||||||||    
T  51701334 cgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgt 51701284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 5775304 - 5775341
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||||||||||||| |||||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtccc 5775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 12895209 - 12895285
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||| |||||||||||| ||||||||| |||||||||||||||  ||||||| |     ||||||||||||||||||    
T  12895209 atatgctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 19312463 - 19312359
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtg-----tccgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    ||||| |||||||||| ||| |||||| |||||| | ||||||||||||||     ||||||| ||||||||||  || |||| |||||||||| ||| |    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  273 tgtga 277  Q
    |||||    
T  19312363 tgtga 19312359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 28470487 - 28470447
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  28470487 attctatgaagcacggacactcctcggattaggcatgtccc 28470447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 37203372 - 37203324
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggac 223  Q
    ||||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  37203372 tctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 482185 - 482248
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgaca 241  Q
    |||||||| |||||||| || |||||| ||||| |  ||||| |||||||||||||||||||||    
T  482185 atgaagcatggacactcatcggattagacgtgttcaggtgtcagacacgtgtccgacaccgaca 482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 40784072 - 40784029
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 49431146 - 49431091
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| ||||| ||||||||||| ||| ||||||||||| |||| |||||||||||    
T  49431146 tctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtc 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 5414101 - 5414155
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||  ||| ||| ||||||| ||||| ||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtc 5414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 12884347 - 12884401
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| |||||| |||| |||  ||||| |||||||||    
T  12884347 ctatgaagcacggacactcctcggattagacgtgccccgatgtcgaacacgtgtc 12884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 22234819 - 22234925
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtcc-----gacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||| ||||| ||| ||||||  ||||||  ||||||||||||||||      |||||||||||||||  ||||| |  ||||||||| |||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaat 22234918  T
Q  271 tatgtga 277  Q
    |||||||    
T  22234919 tatgtga 22234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 23386277 - 23386228
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||||||| |||||||| ||||||  |||||||||||    
T  23386277 ctatgaagcacggacactcctctgattaggcatgtccc-ttgtcggacacg 23386228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 35161155 - 35161101
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||  || ||||||| |||| || ||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtc 35161101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 40742677 - 40742619
Alignment:
Q  215 gtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    ||||||| |||||||| |||||||||||||||  ||||| | ||||||||||| |||||    
T  40742677 gtgtcggtcacgtgtctgacaccgacacgacatcgacacatataattacactagattat 40742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 50281008 - 50280919
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacac 265  Q
    |||||||||||||||| ||  |  |||||  | |||||| ||||| ||||||||||||||| ||||||||||  | |||||||||||||||    
T  50281008 tctatgaagcacggacgctattaggattaaacatgtcccggtgtcagacacgtgtccgaca-cgacacgacaccggcacttgtaattacac 50280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 30094132 - 30094083
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||| ||||||||||||| || ||||||||||||||| ||||| |||||    
T  30094132 ctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacac 30094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 30299048 - 30299011
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtccc 30299011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 30327916 - 30327879
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtccc 30327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 53490747 - 53490784
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaatta 262  Q
    |||||||||||||||||||| | |||||||||||||||    
T  53490747 cgtgtccgacaccgacacgatactgacacttgtaatta 53490784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 2361914 - 2361986
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||||||||||||| || ||||||| ||||| | ||||| ||||     ||||||||||||||||||    
T  2361914 tctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacac 2361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 6485618 - 6485646
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  6485618 gacacttgtaattacactaaattatgtga 6485646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 17425348 - 17425396
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||| |||||||||| ||||||||||||||  ||||| |||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacac 17425396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 18844423 - 18844459
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtcc 18844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 28000672 - 28000724
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||| || ||||||| ||||| | ||||| ||||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtc 28000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 35723353 - 35723418
Alignment:
Q  207 gtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtg 276  Q
    ||||||||||||||||||||    ||||||||| |||||| |||||| | |||||||| | |||||||||    
T  35723353 gtgtcccagtgtcggacacg----cgacaccgatacgacactgacacatataattacattgaattatgtg 35723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||| |||||||||| |||||||||||||   |||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 24339773 - 24339666
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||| |     ||||||||||||||||||||||  |||||||||||||||||| ||    
T  24339773 tctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 24339674  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  24339673 ttatgtga 24339666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 5409771 - 5409871
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||   |||||||||||  ||||||||||||| |||| ||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtccgacacgacaccgacacttgtaattgcactgaattatgt 5409869  T
Q  276 ga 277  Q
    ||    
T  5409870 ga 5409871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 2334379 - 2334274
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||| |||||||||||||| |||||| |||||  ||||||||||||     |||||||||||| |||||||||  ||||||||||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaat 2334281  T
Q  271 tatgtga 277  Q
    |||||||    
T  2334280 tatgtga 2334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 9778624 - 9778524
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||||  |   |||||||||||  |||||||||||||| ||| ||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgt-tgtgtccgacacgacaccgacacttgtaattatactgaattatgt 9778526  T
Q  276 ga 277  Q
    ||    
T  9778525 ga 9778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 32093954 - 32094055
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgt-cccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    |||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||| ||   |||||||||||  |||| ||||||||||||| |||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgt-cgtgtccgacacgacaccgacatttgtaattacactgaattatg 32094052  T
Q  275 tga 277  Q
    |||    
T  32094053 tga 32094055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 43027404 - 43027504
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||   | |||||||||  |||||||||| |||||||  |||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtctgacacgacaccgacacttgtatttacactgcattatgt 43027502  T
Q  276 ga 277  Q
    ||    
T  43027503 ga 43027504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 598327 - 598273
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtc 598273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 13770810 - 13770717
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||| || |||||||||||| || |||||||||||||||  |   |||||||||||  |||||||||||||||||| ||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgt-tgtgtccgacacgacaacgacacttgtaattacactgaattatgt 13770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 40287306 - 40287368
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    |||||||||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtccgataccgacac 40287368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 26033392 - 26033496
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtcc-----gacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    ||||| |||||||||||||| ||||||| ||||| | || |||||||||||||      ||||||||||||| |  |||||||||||||||||| |||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  273 tgtga 277  Q
    |||||    
T  26033492 tgtga 26033496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 29998974 - 29999038
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    |||||||| |||||||||||||||||| |||||    ||||||||||||||||||||||||||||    
T  29998974 atgaagcatggacactcctccgattagacgtgtttaggtgtcggacacgtgtccgacaccgacac 29999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 7133212 - 7133262
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacg 7133262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 7438836 - 7438730
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||   ||||||||||||| ||||||| |||     |||||  |||||||||| ||||  |||||||||||||||| | |||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaat 7438737  T
Q  271 tatgtga 277  Q
    |||||||    
T  7438736 tatgtga 7438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 29763129 - 29763183
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||||||||||   |||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtc 29763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 32287404 - 32287457
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtc 32287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 9408317 - 9408369
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||| |||||||| ||||||  |||||||||||||||||||||||||||||    
T  9408317 cgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtga 9408369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 11272569 - 11272617
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 14729822 - 14729770
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtg 228  Q
    |||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 21880272 - 21880200
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    ||||||||||||||||||| ||| ||||||||||||||  ||||||||||     ||||||||||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 18215144 - 18215187
Alignment:
Q  183 gcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 1433578 - 1433524
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| |||||| |||||||  ||||||||||| ||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtc 1433524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 15680928 - 15680874
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||  ||||| |||||| | ||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtc 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 17852119 - 17852065
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||  |||||| ||||| | ||||||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtc 17852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 21864927 - 21864873
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||| ||||||||||  ||||| |||||||| ||||||||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtc 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 32308249 - 32308144
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||| | ||||||||| ||||||  ||||| | ||||||||||     ||||||| |||||||||||||| |||||| |  ||||||||| ||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatt 32308150  T
Q  272 atgtga 277  Q
    ||||||    
T  32308149 atgtga 32308144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 3991432 - 3991392
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagt 216  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagt 3991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 18039067 - 18039023
Alignment:
Q  233 acaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtga 18039023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 20549909 - 20549857
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||| |||||||| ||||||||||||| || ||||||||| ||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgt 20549857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 25822785 - 25822685
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||| |||||||||||||  |||||||| ||||||  |||| ||||     ||||||||| ||||| ||||||  |||||||||||||||||| |||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  271 t 271  Q
    |    
T  25822685 t 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 11738151 - 11738202
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    ||||||| |||||||||||||| ||||||||||||| |||||| | ||||||    
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgt 11738202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 27229244 - 27229346
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt-----gtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    |||||| ||||| |||||  ||||||||||||| ||||||| ||||||     ||| ||||  |||||||||  || |||| ||||||||||||||||||    
T  27229244 gaagcatggacattcctcgaattaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatg 27229343  T
Q  275 tga 277  Q
    |||    
T  27229344 tga 27229346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 29812598 - 29812658
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||     |||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcg-----gtgtccgacaccgacac 29812658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 30813916 - 30813866
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||||||| |||||||||||| |   |||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacg 30813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 41229237 - 41229287
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||| |||  |||||||||||| ||||| ||||||||    
T  41229237 ctatgaagcacggacacttctcatattaggcgtgtcgcagtgacggacacg 41229287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 5307376 - 5307331
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||    
T  5307376 tctatgaagcacgtacactccttggattaggcgtgtcctagtgtcg 5307331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 6028732 - 6028651
Alignment:
Q  199 gattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||||| |||||||| || ||||||     |||||| |||||||||  |||| ||||||||||| ||||||||||    
T  6028732 gattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgt 6028651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    ||||||||||||||||||  ||||||||||||||| ||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 11665370 - 11665475
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||| |||||  |||||  ||||  | ||||||||||||||||     ||||||||||| ||||  ||||||| |||||| ||| ||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatt 11665469  T
Q  272 atgtga 277  Q
    ||||||    
T  11665470 atgtga 11665475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 21560572 - 21560527
Alignment:
Q  232 gacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||| ||||||  |||||||||||||||||| ||||||||||    
T  21560572 gacaccgatacgacaccgacacttgtaattacactgaattatgtga 21560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 24105797 - 24105748
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||  ||||||||| | ||||||||||||| |||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacac 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 28973881 - 28973918
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  28973881 ctatgaagcacggacacacctcggattaggcgtgtccc 28973918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 35750006 - 35749957
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||| ||||||||||||| |||| ||||||| || ||||||||    
T  35750006 ctatgaagcacagacactcctccgactaggtgtgtcccggtttcggacac 35749957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 43250118 - 43250073
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||  |||||||||||||  ||||||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 43250073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 1401142 - 1401094
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||    
T  1401142 ctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca 1401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 11831508 - 11831460
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    ||||||||||||||| ||||||   | ||||||||||||||||||||||    
T  11831508 cgtgtccgacaccgatacgacacgaatacttgtaattacactaaattat 11831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 15902898 - 15902846
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||| |||||||| |||  ||||| | |||||||||||||||||||||    
T  15902898 cgtgtccgataccgacacaacaccgacacatataattacactaaattatgtga 15902846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 38804486 - 38804538
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||  ||||||||| |||||||| |||||| | |||||||||    
T  38804486 attctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacac 38804538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 10339054 - 10339161
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaatt-acactaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||| || |||||| | ||||| ||||| ||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaa 10339153  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  10339154 ttatgtga 10339161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 8365448 - 8365554
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||     ||||||||| ||||||||||||  |||||||||||||||||  |||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 8365547  T
Q  271 tatgtga 277  Q
    |||||||    
T  8365548 tatgtga 8365554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 16766827 - 16766721
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||| || || ||||||||||||||| |||||||||||||||     |||||||||||||||||  |||||||||||||||||| |||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  271 tatgtga 277  Q
    |||||||    
T  16766727 tatgtga 16766721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 9107298 - 9107405
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||||| |||||||| ||||||| ||||||| |||||||||||     |||||||||||||||||||||  |||||||||||||||||| ||    
T  9107298 tctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 9107397  T
Q  270 ttatgtga 277  Q
    || |||||    
T  9107398 ttttgtga 9107405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 17327590 - 17327690
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||   ||||||||||| |||||| | || ||||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgt-cgtgtccgacacgacactgacacatatagttacactaaattatgt 17327688  T
Q  276 ga 277  Q
    ||    
T  17327689 ga 17327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 341
Target Start/End: Original strand, 17841530 - 17841686
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtg 276  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||   |||||||      | ||||||||||||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgt-cgtgtccgacac-----cgtcacttgtaattacactaaattatgtg 17841623  T
Q  277 annnnnnncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgcttcatag 341  Q
    |       ||||||||||| |||||||| || ||||||| || |||| |||||||||||||||||    
T  17841624 a-ttttttcaaattattagctgtgtcggcgtgtcagtgt-ccgtgtccgtatcagtgcttcatag 17841686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 31385048 - 31384944
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||||||||  ||||||||||||||| |||| |||||||     ||||| ||| | |||||||| ||||||||||||||||||| ||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatt 31384950  T
Q  272 atgtga 277  Q
    ||||||    
T  31384949 atgtga 31384944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 10770607 - 10770709
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-ccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    |||||||||||||||||||||| |||||||| |||||| |  ||||||||||||  ||   | |||||||||  |||||||||||||||||| |||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatg 10770706  T
Q  275 tga 277  Q
    |||    
T  10770707 tga 10770709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 12696446 - 12696350
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||| |||||||||  ||| ||| ||||||| ||||| |||||||||| |   ||||||||||| ||||||||||||||||||| ||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtc-gtgtccgacacgacactgacacttgtaattacactgaattatgt 12696350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 8714111 - 8714004
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||  |||||||||| |||| ||||||||||  ||||||| |     ||||||||||||||||||||||   ||| ||||||||||||| ||    
T  8714111 tctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaa 8714012  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  8714011 ttatgtga 8714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 9522998 - 9522915
Alignment:
Q  199 gattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||| | ||||||||||||||||     |||||||||||| |||  |||||||||||||||||| ||||||||||    
T  9522998 gattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtga 9522915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 34595254 - 34595199
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||    
T  34595254 tctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtc 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 8776908 - 8776962
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtc 8776962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 28152217 - 28152163
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtc 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 21395292 - 21395341
Alignment:
Q  226 gtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 31959268 - 31959215
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtc 31959215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 13360313 - 13360361
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca 13360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 17435329 - 17435225
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||| |||||||||  || |||||| ||||||||||||||| |||||||||     ||||| |||||  ||| | ||||||||||||||||| |||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaat 17435230  T
Q  271 tatgt 275  Q
    |||||    
T  17435229 tatgt 17435225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 4878061 - 4877991
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||     ||||||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 5970036 - 5970143
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||  | |||||||| |||| ||||||||||  ||||||| |     ||||||||||||||||||||||   ||| ||||||||||||| ||    
T  5970036 tctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaa 5970135  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  5970136 ttatgtga 5970143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 7378103 - 7378052
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  7378103 atattctatgaagcacggacacttctcagattagccgtgtcccggtgtcgga 7378052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 18367966 - 18367871
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacact 266  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||| ||||     |||||| |||||||||||||||  ||||| | ||||||||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacact 18367871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 34172284 - 34172241
Alignment:
Q  199 gattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  34172284 gattaggcgtgtcctggtgtcggacacgtgtccgacaccgacac 34172241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 7248488 - 7248414
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgac 245  Q
    |||||||||||||||||||||| |||| | |||||||| |||||||||||     |||||| |||||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgac 7248414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 7938219 - 7938170
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||||| ||| ||||||||| | |||||||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 9629513 - 9629464
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||| ||||||||||| |||||| |||||| |||||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacac 9629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 32511606 - 32511639
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtg 209  Q
    ||||||||||||||||||||||||||||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtg 32511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 426478 - 426514
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtcc 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 2117175 - 2117139
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    ||||||||||||||||||||||||||||||| |||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtcc 2117139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 3209519 - 3209379
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgaca------cgacagtgacacttgtaattac 263  Q
    ||||||||||||  ||||||||| ||||||||||||||  ||||||||| ||||||     |||||| ||||      |||||  |||||||||||| ||    
T  3209519 tctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataac 3209420  T
Q  264 actaaattatgtgannnnnnncaaattattagatgtgtcgg 304  Q
    ||||||||||||||       ||||||||||| ||||||||    
T  3209419 actaaattatgtgatttttttcaaattattagctgtgtcgg 3209379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||||     ||||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 34446695 - 34446647
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||||    
T  34446695 atatactatgaagcacggacactccttggattaggtgtgtcccagtgtc 34446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 34894968 - 34895016
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||||||||||||||||||||  |||||| ||||||| ||||||||||    
T  34894968 ctatgaagcacggacactcctcatattaggtgtgtccctgtgtcggaca 34895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 16111743 - 16111790
Alignment:
Q  228 gtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||| ||||||||||| |||||| | |||||||||||||||||||    
T  16111743 gtccgactccgacacgacactgacacctataattacactaaattatgt 16111790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgt 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 7996325 - 7996387
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-cgacaccgac 240  Q
    ||||||||||| ||||||  ||||||||||||||| ||||  |||||||||| ||||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcgcgacaccgac 7996387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 8022476 - 8022414
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-cgacaccgac 240  Q
    ||||||||||| ||||||  ||||||||||||||| ||||  |||||||||| ||||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcgcgacaccgac 8022414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 8805524 - 8805562
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccca 214  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtccca 8805562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 10842653 - 10842556
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||||||||||||||||||| |||||| |||||| | ||     |||| |||||||||||||||||     ||||| | | ||||||||||||||||    
T  10842653 tctatgaagcacggacactcctcggattagccgtgtctcggt-----acacatgtccgacaccgacacgtgttcgacacatatgattacactaaattatg 10842559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 16388175 - 16388228
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    |||| ||||| ||||||||||||||||||||||  | ||||||||||||||||||    
T  16388175 gacagtcctcggattaggcgtgtcccagtgtcgtgc-cgtgtccgacaccgacac 16388228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 21044826 - 21044868
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||  ||||||||||||||||||||||||||| ||||    
T  21044826 gacactccttagattaggcgtgtcccagtgtcggacacatgtc 21044868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 21068084 - 21068126
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||  ||||||||||||||||||||||||||| ||||    
T  21068084 gacactccttagattaggcgtgtcccagtgtcggacacatgtc 21068126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 28715414 - 28715360
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||| ||||| |||  |||||||||||||| |||||| |||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtc 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 33340370 - 33340420
Alignment:
Q  227 tgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||||||| ||||||| |||||||| |||||||| |||| |||||||    
T  33340370 tgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtga 33340420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 35125728 - 35125678
Alignment:
Q  227 tgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||||||| ||||||| |||||||| |||||||| |||| |||||||    
T  35125728 tgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtga 35125678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 10294237 - 10294144
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattaca 264  Q
    ||||||||||| |||||||||| ||||||  |||||| ||| |||||||     ||||||||||||| ||||||||  ||||| | ||||||||    
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattaca 10294144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 5569866 - 5569834
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgt 210  Q
    |||||||||||||||||||| ||||||||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgt 5569834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 7625236 - 7625173
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccga 239  Q
    ||||||||||||| ||||||||  ||||| |||||| || |||||||||||| | ||||||||||    
T  7625236 tctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacacgcg-ccgacaccga 7625173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 7930413 - 7930353
Alignment:
Q  183 gcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-cgacaccgacac 242  Q
    ||||| |||||||||  |||||||||||||  |||||||||||||| | ||||||||||||    
T  7930413 gcacgaacactcctcgaattaggcgtgtcctggtgtcggacacgtgacacgacaccgacac 7930353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||  ||||||||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 17302620 - 17302543
Alignment:
Q  238 gacacgacagtgacacttgtaattacactaaattatgtgannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    ||||||||| ||||||||||||||||| | ||||||||||       ||||||||||| |||||| | || |||||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 26562765 - 26562713
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||| ||||||||||||||||  ||||| | |||||||||| ||||||||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtga 26562713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 37419873 - 37419767
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||     ||||||||||||||||||||||  | |||||||||||||||| |||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  271 tatgtga 277  Q
    | |||||    
T  37419773 tttgtga 37419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 11223790 - 11223896
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca----cgtgtccgacaccgacacgacagtgacacttgtaattacactaa 268  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    ||||||||||||| ||| ||||  |||||||||||||||||| |    
T  11223790 attctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagacagtgtcgtgtccgacacctacatgacaccgacacttgtaattacactga 11223889  T
Q  269 attatgt 275  Q
    |||||||    
T  11223890 attatgt 11223896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 26769642 - 26769547
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacac 265  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||     ||||||| ||||||| ||||  |||||||||||||||||    
T  26769642 tctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacac 26769547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 30717459 - 30717565
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| |||     ||||||||||| ||||||||||  |||||||||||||||||| |||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  271 tatgtga 277  Q
    |||||||    
T  30717559 tatgtga 30717565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 32749753 - 32749860
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt-----gtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||| |||||||||||  ||| ||||||||||||||||||||||| |     |||||||| |||||||||| |||||||| | |||||||| ||    
T  32749753 tctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaa 32749852  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  32749853 ttatgtga 32749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 35056998 - 35056896
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| ||||||||||||  | ||||||||||||     ||||||||||||||||||||  ||||| | |||||||||| |||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  271 tat 273  Q
    |||    
T  35056898 tat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 28412477 - 28412409
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacg 243  Q
    |||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||||||||||| |||||    
T  28412477 tctatgaagcactgacgctcctcgaattagccgtgtcccagtgtcggacacgtgtccgacaccaacacg 28412409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 34784910 - 34785017
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||| ||||||||||  || ||||||||||| ||||| ||||     ||||||||| ||||||||||||  ||||| | |||||||||||||    
T  34784910 tctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaa 34785009  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  34785010 ttatgtga 34785017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||     ||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 28596587 - 28596534
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtc 28596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 341
Target Start/End: Complemental strand, 37559098 - 37558939
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    |||||||||||||||||||||||| ||||| |||||| || ||||||||||||||| | |  |||||||      |||||||||||||||| | ||||||    
T  37559098 ttctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgt-caagtccgacac-----cgacacttgtaattacattgaattat 37559005  T
Q  274 gtgannnnnnncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgcttcatag 341  Q
    ||||       ||||||||||| |||||||| || ||||||| || |||| ||||| |||||||||||    
T  37559004 gtga-tttttacaaattattagctgtgtcggcgtgtcagtgt-ccgtgtccgtatccgtgcttcatag 37558939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 38117099 - 38117152
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgt 38117152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 42511322 - 42511375
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgt 42511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 15657992 - 15657888
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt-----gtccgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    |||||||| ||||||||||| || |||||||||||| | |||||||||||     |||||||| | ||||||||  |||| ||||||||||||| |||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  273 tgtga 277  Q
    |||||    
T  15657892 tgtga 15657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 21624374 - 21624315
Alignment:
Q  183 gcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    ||||||||||||||  ||||||| |||||||  |||||||||||||||||||||||||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggacacgtgtccgacaccgacac 21624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 23058389 - 23058477
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||        ||||||||||||||  ||||||||||||||||||  |||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca--------acaccgacacgacaccgacacttgtaattacactggattatgtga 23058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 18840953 - 18841007
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtc 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 24009415 - 24009360
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||| ||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc 24009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 21782744 - 21782798
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||| | |||||| |||||||| |||| |||||||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtc 21782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 24975254 - 24975304
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||||    
T  24975254 tctatgaagcacggacactcctcagattagatttgtcccagtgtcggacac 24975304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 27084388 - 27084334
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||  |||||||||||||||||||||||| | |||| |||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtc 27084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 29367282 - 29367379
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||||||||  ||| ||||| |||||||| |||| | ||||||||||| |||     |||||||||| |  |||| |||||||||||||||||||||    
T  29367282 tctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgt-----accgacacgataccgacatttgtaattacactaaattatg 29367376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 34993922 - 34993976
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||| ||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtc 34993976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 41843565 - 41843511
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||| |||||||||| ||| | ||||||||| ||||||||||||||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtc 41843511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 44635612 - 44635522
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||| | ||||      ||||||||||||||||||      |||||||||||||||||| ||||| ||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgt------cgtgtccgacaccgacac-----cgacacttgtaattacactgaattacgt 44635524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 44860449 - 44860347
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    |||||||||||||||||||||  |||||| |||||||  |||||||||     ||||||| ||||| ||||||||  ||||| | |||||||||| ||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  272 atg 274  Q
    |||    
T  44860349 atg 44860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 18631351 - 18631400
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| |||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtctgacac 18631400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 4882679 - 4882727
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattat 273  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||    
T  4882679 cgtgtctgacaccgacacgacatcgacacttgtaattacactgaattat 4882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 17776720 - 17776612
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacacta 267  Q
    ||||| ||||||||||||||||||| |||||||| ||||||   ||||||||     ||||||| ||||||||  |||| |||||| | ||||||||||     
T  17776720 attctgtgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactg 17776621  T
Q  268 aattatgtg 276  Q
    | |||||||    
T  17776620 acttatgtg 17776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgaca 241  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||||     |||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 10535684 - 10535734
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||||| |||||    
T  10535684 tctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 12224329 - 12224291
Alignment:
Q  189 acactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgt 12224291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 15907851 - 15907897
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    ||||||||||||||||||| || |||| |||||||||| ||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcgga 15907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 15972992 - 15972938
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||| || || ||||||| ||||||| | ||||||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtc 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 37411188 - 37411234
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||| | |||||||| || |||||||||||||||||||||||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacg 37411234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||| |||||| ||  |||||||||||||| |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 27286222 - 27286327
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    |||||||||| ||||||| |  ||||||   |||||| ||||||||||     ||||||||||| ||||| |||| |||||| | |||||||||| ||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatt 27286321  T
Q  272 atgtga 277  Q
    ||||||    
T  27286322 atgtga 27286327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 34221463 - 34221500
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  34221463 ctatgaagcacggaaactcctcggattaggcgtgtccc 34221500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 6180790 - 6180838
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||||| ||||||| ||||||| ||||| |||| |||||||    
T  6180790 ctatgaagcacggaaactcctcagattaggtgtgtctcagtatcggaca 6180838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 18622721 - 18622673
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||||||||||||| ||||| | ||||||| |||| |||||    
T  18622721 ctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggaca 18622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 23354582 - 23354618
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||| |||||||||||||| |||||||||||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtccc 23354618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 23354926 - 23354973
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgtccc-gtgtcagacacg 23354973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 33153488 - 33153448
Alignment:
Q  237 cgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtga 33153448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 39323357 - 39323321
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| |||||||| |||||    
T  39323357 ctatgaagcacggacactcctcagattaggcctgtcc 39323321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 47989627 - 47989521
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| |||||||||||||||  |||| ||||     ||||||||||||||||||||||  |||||||||||||||||| |||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  271 tatgtga 277  Q
    |||||||    
T  47989527 tatgtga 47989521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 17778670 - 17778581
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-cgacaccgacacgacagtgacacttgtaattacact 266  Q
    |||||||||| ||||| ||| |||||||| |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacact 17778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 1486646 - 1486744
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||   |||||||||||  ||||||| |||||||||| ||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtccgacacgacaccgacacttataattacactgaattatgtga 1486744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 6427594 - 6427488
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||     |||||||| || |||||||| ||||||||||| ||||| | |||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaat 6427495  T
Q  271 tatgtga 277  Q
    |||||||    
T  6427494 tatgtga 6427488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 15449170 - 15449267
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||| |||||||||  |||||||| |||| | |||||    |||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  15449170 ctatgaagcacagacactccttggattaggcatgtctcggtgtc----acgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgt 15449265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 40917879 - 40917779
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||     | ||||||||||||||  || ||||||||||||||| |||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat 40917780  T
Q  271 t 271  Q
    |    
T  40917779 t 40917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 18556385 - 18556548
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccg-----acaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |     |||||| |||||||   | ||||||||||||| |||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  271 tatgtgannnnnnncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgctt 336  Q
    |||||||       ||||||||||| |||||||| || ||||||| || |||| ||||| ||||||    
T  18556485 tatgtga-tattttcaaattattagctgtgtcggcgtgtcagtgt-ccgtgtccgtatccgtgctt 18556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 25362012 - 25361910
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca---cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    ||||||||||||||||||| || |||||||  ||| || ||||||||||   |||||||||||||||||||||| |||||| | |||||||||| |||||    
T  25362012 ctatgaagcacggacactcttcggattagg--tgttccggtgtcggacatgtcgtgtccgacaccgacacgacactgacacatataattacactgaatta 25361915  T
Q  273 tgtga 277  Q
    |||||    
T  25361914 tgtga 25361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 31694639 - 31694745
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| |||||||||||| || |||||| | | ||||     |||||||||||||||||  |||||||||||||| ||| |||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 31694738  T
Q  271 tatgtga 277  Q
    |||||||    
T  31694739 tatgtga 31694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 32461393 - 32461498
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||     |||||||||||| |||   ||||||||||||||| |||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaat 32461491  T
Q  271 tatgtga 277  Q
    |||||||    
T  32461492 tatgtga 32461498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 37598950 - 37598896
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtc 37598896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 34712322 - 34712416
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| ||||||||||      ||||||||||| |||||| | ||||||||||||||||||    
T  34712322 tctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgt------ccgacacgacactgacacatataattacactaaattatg 34712415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 5944414 - 5944307
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    ||||||||||||| ||||||||| |||||||||| |||| ||||||||||      ||||||| || ||||||||||  ||||||| |||||||||| ||    
T  5944414 tctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaa 5944315  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  5944314 ttatgtga 5944307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 9828174 - 9828120
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtc 9828120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 48040418 - 48040464
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacg 48040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 18337448 - 18337395
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgt 18337395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 6612112 - 6612204
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||  ||||||||||||||  |||||||||||     |||||||||| ||||||||||  |||||||||||||||||| ||||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgt 6612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 21038202 - 21038109
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||| ||||||| || ||||||||||||| ||||||||    |||||||||||||||||||||| |||| | | | |||||||| ||||||||    
T  21038202 tgaagcacagacactcatcagattaggcgtgtctcagtgtcgt---cgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgt 21038109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 340
Target Start/End: Original strand, 46348323 - 46348479
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||||||||| |||| ||| ||||||||| | ||||||||||||||| ||   |||||||      ||||||||||||||||||||||||| |    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgt-cgtgtccgacac-----cgacacttgtaattacactaaattatat 46348416  T
Q  276 gannnnnnncaaattattagatgtgtcggtgtatcagtgtgccctgtcagtatcagtgcttcata 340  Q
    ||       ||||||||||| |||||||| || ||||||| || |||| ||||| ||||||||||    
T  46348417 ga-ttttttcaaattattagctgtgtcggcgtgtcagtgt-ccgtgtccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 15765877 - 15765828
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 22515827 - 22515922
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||| | |||| ||   |||||||      |||||||||||||||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgt-cgtgtccgacac-----cgacacttgtaattacactaaattatgt 22515920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 35919223 - 35919263
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  35919223 attctatgaagcacggacagtcctccgattaggcgtgtccc 35919263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 34741965 - 34741915
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgt 34741915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 1704934 - 1705056
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatg 274  Q
    ||||||||||| ||||||||||  ||||||||||||| | |||||||||||||          |||||||||  ||||||||||||||| || |||||||    
T  1704934 tctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgt---------tgacacgacaccgacacttgtaattaccctgaattatg 1705024  T
Q  275 tgannnnnnncaaattattagatgtgtcggtgt 307  Q
    |||       |||||||||||||||||||||||    
T  1705025 tga-ttttttcaaattattagatgtgtcggtgt 1705056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 1815376 - 1815322
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||| ||||| |||||||| ||||||||||||||| |||||||||| |||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtc 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 5898206 - 5898260
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||| ||||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtc 5898260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 16164244 - 16164350
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||| |||  |||||| || ||||||||||||||  |||||||||||||||     || ||||| |||||||| |||||| | |||||||| |||||    
T  16164244 ctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaat 16164343  T
Q  271 tatgtga 277  Q
    |||||||    
T  16164344 tatgtga 16164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16812675 - 16812629
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 35702542 - 35702580
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccca 214  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtccca 35702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 46940748 - 46940798
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||| ||||||||| |||||||||||| || ||||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 52903366 - 52903297
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgg--acacgtgtccgacaccgacac 242  Q
    |||||||||||||||||||| ||  || || |||||||| |||||||  |||||||||||||||||||||    
T  52903366 tctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacacacgtgtccgacaccgacac 52903297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 6574096 - 6574051
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgg 221  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 19562556 - 19562608
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||    
T  19562556 ctatgaagcacg-acactcctcggattaggtgtgtccctgtgtcggacacgtgt 19562608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||| || |||||||||||| || |||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 40258874 - 40258927
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||| ||||||||||| ||||||||||||||  |||||||||| |||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtc 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 22881567 - 22881611
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 22947849 - 22947813
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 23531733 - 23531781
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggac 223  Q
    ||||||||||||| ||||||||||||||| ||||||  |||||||||||    
T  23531733 tctatgaagcacgaacactcctccgattaagcgtgtttcagtgtcggac 23531781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 26830701 - 26830653
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||||||||||| ||||||||||||||| || ||| ||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgt 26830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 30173691 - 30173795
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||| | || || | |||||||||||| || ||||||||     ||||||||| || |||||||||  |||||||||||||||||| | |    
T  30173691 ctatgaagcacggatattcgtcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagt 30173790  T
Q  271 tatgt 275  Q
    |||||    
T  30173791 tatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 36878585 - 36878541
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcg 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 44482306 - 44482254
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||||||||||||  ||||| | |||||||||| ||||||||||    
T  44482306 cgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtga 44482254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 17831461 - 17831516
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||| || ||||||||||  ||||||||||||||| ||||||||||| ||||    
T  17831461 tctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtc 17831516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 25934746 - 25934651
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacact 266  Q
    |||||||||||||||||||||  ||| |||||| |||| ||||| ||||     |||||||||||||||||||| |  ||||| | ||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacact 25934651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 51410144 - 51410022
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||| | ||||||  ||||||||||||| | |||||||| ||||||| |   |||||||      |||||||||||||||||| ||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtc-gtgtccgacacc-----gacacttgtaattacactgaattatgt 51410051  T
Q  276 gannnnnnncaaattattagatgtgtcgg 304  Q
    ||       ||||||||||||||||||||    
T  51410050 gatttttttcaaattattagatgtgtcgg 51410022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 113412 - 113362
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||| || |||||||| ||||||||||||||| |||| |||||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggacacg 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 5376483 - 5376533
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||| ||||||||||  ||||||| |||||||||| ||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgt 5376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 9690213 - 9690267
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||  ||||||  | ||||||||||||||| ||||||||||||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 10577676 - 10577725
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| ||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacg 10577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 18190048 - 18190101
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||| |  ||||||||| ||||||| ||||||| |||||||||||||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgt 18190101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 20157284 - 20157385
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||| |||||||  |||||| ||||| | |||||||||||| ||| |   | |||||||||  ||||| | | |||||||| ||||||||    
T  20157284 ctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacacgacaccgacacatatgattacactgaattatgt 20157383  T
Q  276 ga 277  Q
    ||    
T  20157384 ga 20157385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 30359484 - 30359447
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  30359484 ctatgaagcacggacactcctcagatttggcgtgtccc 30359447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 38078596 - 38078637
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    ||||||||||||||||| | ||||||| ||||||||||||||    
T  38078596 atattctatgaagcacgaatactcctcggattaggcgtgtcc 38078637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 7918154 - 7918190
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcc 7918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 9630561 - 9630597
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtcc 9630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 14359529 - 14359557
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtga 14359557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 22881623 - 22881651
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  22881623 gacacttgtaattacactaaattatgtga 22881651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 40747707 - 40747755
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||||||||||||| |||||| ||||||| ||||||| |||| |||||    
T  40747707 ctatgaagcacggacgctcctcggattaggggtgtccctgtgtgggaca 40747755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 48450550 - 48450586
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| |||||| |||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcc 48450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 241725 - 241618
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||     ||||||||||| ||||||||  ||||||  |||||||||||||    
T  241725 tctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaa 241626  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  241625 ttatgtga 241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 236914 - 236964
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||||| ||||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacg 236964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 3778 - 3884
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||| ||||||||||| ||||||||||||| |  |||||||||     ||||||||||||| |||||||| ||||||||||||||||||| |||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaat 3877  T
Q  271 tatgtga 277  Q
    |||||||    
T  3878 tatgtga 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 71855 - 71749
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||||| |||||||||| |||||| |||||||| |||||||||||     ||||||||||||||||||||| ||||||| ||||||||||| |||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaat 71756  T
Q  271 tatgtga 277  Q
    | |||||    
T  71755 tgtgtga 71749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 22652106 - 22652000
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||||     ||||||||||||||||||||||  |||||||||||||| | | |||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  271 tatgtga 277  Q
    |||||||    
T  22652006 tatgtga 22652000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 15816058 - 15816164
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga-----cacgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||||       ||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  271 tatgtga 277  Q
    |||||||    
T  15816158 tatgtga 15816164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 29510233 - 29510339
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||     |||||||||||||||||| |||  |||||||||||||| ||| |||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  271 tatgtga 277  Q
    | |||||    
T  29510333 tttgtga 29510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 22197671 - 22197777
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacac-gacagtgacacttgtaattacactaaa 269  Q
    |||| ||||||||||||||||| |||||||||||  || ||||||||||||||||     |||||| ||||| |||| ||||||||||||||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac-gacactgacactgacacttgtaattacactaaa 22197769  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  22197770 ttatgtga 22197777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 29447575 - 29447468
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||||     |||||| |||||||||||||||   |||| | |||||||||| ||    
T  29447575 tctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaa 29447476  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  29447475 ttatgtga 29447468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 8343446 - 8343340
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||||||||||     |||| |||||    |||||| |||||||||||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaat 8343347  T
Q  271 tatgtga 277  Q
    |||||||    
T  8343346 tatgtga 8343340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 5813707 - 5813657
Alignment:
Q  180 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtc 5813657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 8343086 - 8343020
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacac 242  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||||||||| ||| ||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacac 8343020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 18407838 - 18407784
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtc 18407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 29447040 - 29447145
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||||||||  ||||||||||||||  ||||| ||||     ||||||||||||||||| ||||  |||||||||| ||||| | ||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  272 atgtga 277  Q
    ||||||    
T  29447140 atgtga 29447145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 2572039 - 2572091
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  2572039 cgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtga 2572091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 21465542 - 21465449
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg-----tgtccgacaccgacacgacagtgacacttgtaattaca 264  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| |||||||     |||||||||| |||||||||   |||||||||||||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattaca 21465449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 30067968 - 30068017
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacac 30068017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 3025668 - 3025616
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||| |||||| |||||| ||||||| ||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtc 3025616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 26902103 - 26902158
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||| | ||||||||||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtc 26902158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 27067283 - 27067322
Alignment:
Q  225 cgtgtccgacaccgacacgacagtgacacttgtaattaca 264  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  27067283 cgtgtccgacaccgacacgacactgacacttgtaattaca 27067322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 34450961 - 34451036
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgaca 246  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||| ||||     ||||||||||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgaca 34451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 11803389 - 11803335
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| |||||| ||||| || |||||||||| |||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtc 11803335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 22943301 - 22943343
Alignment:
Q  188 gacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtc 22943343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 31109463 - 31109501
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtc 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 36450694 - 36450744
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||| |||||||||| ||||||||||||||  ||||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacg 36450744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 39820547 - 39820498
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacg 39820498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 17751775 - 17751730
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgg 221  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 17760762 - 17760717
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgg 221  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 24858135 - 24858036
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||  ||||||||| ||||||||||||||| | || |||||| ||| ||   |||||||||||  ||||||||| |||||||| ||||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgt-cgtgtccgacacgacaacgacacttgt-attacactgaattatgt 24858038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 926730 - 926782
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||| ||| | || |||||| ||||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtc 926782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 44067644 - 44067596
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 44067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 20679337 - 20679388
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||| ||||||||||| | | ||||||||||| |||||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgt 20679388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtc 211  Q
    |||||||||||||||||||||| |||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 40064083 - 40064032
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||| |||||||||||||||| ||||||  ||||||| |||||||||||    
T  40064083 ttctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 40332307 - 40332256
Alignment:
Q  179 tgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||| |||||||||||||| ||||||||| ||||| |||| |||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtc 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 3951476 - 3951530
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||| ||||||  |||||||||||| || ||||| ||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtc 3951530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 4298830 - 4298882
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||    
T  4298830 ctatgaagcacg-acactcctcagattaggcgtgtccc-gtgtcgaacacgtgtc 4298882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 12570437 - 12570491
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||| ||||||||||| || || ||||||||||||||  |||||||||||||||    
T  12570437 tctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgt 12570491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 12570663 - 12570717
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||| ||||||||||| || || ||||||||||||||  |||||||||||||||    
T  12570663 tctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgt 12570717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 14134818 - 14134764
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||| ||||||||||||||  |||||||||||||  ||| ||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtc 14134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 24764809 - 24764847
Alignment:
Q  226 gtgtccgacaccgacacgacagtgacacttgtaattaca 264  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  24764809 gtgtccgacaccgacacgacagtgacacatgtgattaca 24764847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 25566950 - 25566912
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  25566950 tctatgaagcacagacactcctcggattaggcgtgtccc 25566912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 28745628 - 28745522
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||   ||||| | |||| | ||| ||||||     ||||||||||||||||||||||  |||| ||||| ||||| | |||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaat 28745529  T
Q  271 tatgtga 277  Q
    |||||||    
T  28745528 tatgtga 28745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 11927013 - 11927050
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtc 211  Q
    ||||||||||||||||||||| || |||||||||||||    
T  11927013 ttctatgaagcacggacactcatcggattaggcgtgtc 11927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 13436909 - 13436954
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcg 220  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  13436909 tctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 24362192 - 24362237
Alignment:
Q  232 gacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||||| |||||| | |||||||||| ||||||||||    
T  24362192 gacaccgacacgacattgacacatataattacactgaattatgtga 24362237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 25566910 - 25566865
Alignment:
Q  232 gacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||| ||||||||  |||||||||||||||||| ||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtga 25566865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 27213644 - 27213595
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||| ||| |||||| |||||||| ||||| |||||    
T  27213644 ctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 11944797 - 11944749
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga 222  Q
    |||||||||||||| |||||| || ||||||||||||| | ||||||||    
T  11944797 ttctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgga 11944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 13397670 - 13397622
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    |||||||||||||||||||||   |||||||||||| | ||||||||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggaca 13397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 16641909 - 16642008
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||||  ||||| ||| ||   |||||||||||  ||||| | |||  ||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgt-cgtgtccgacacgacaccgacacatataacgacactaaattatgt 16642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgt 218  Q
    |||||||||||||||||||| ||||||| ||||||| ||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 20873121 - 20873093
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  20873121 gacacttgtaattacactaaattatgtga 20873093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 24613640 - 24613604
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtccc 213  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  24613640 tatgaagcacggacacttctccaattaggcgtgtccc 24613604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 41961579 - 41961673
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacac 265  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||     ||||||||| ||||||||||||  |||||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacac 41961673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 27505370 - 27505270
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||| ||   | |||||||||  |||||||||||||||||| ||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgt-cgtgtcagacacgacaccgacacttgtaattacacttaattatgt 27505272  T
Q  276 ga 277  Q
    ||    
T  27505271 ga 27505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 34185052 - 34185158
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||     | |||||||||  |||||||||  |||||||||||||||||| |||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  271 tatgtga 277  Q
    | |||||    
T  34185152 tgtgtga 34185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 315
Target Start/End: Complemental strand, 55401194 - 55401062
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||   |||||||      |||||||||||||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgt-cgtgtccgacac-----cgacacttgtaattacactaaattatgt 55401101  T
Q  276 gannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    ||       ||||||||||| |||||||| ||||||||||    
T  55401100 ga-ttttttcaaattattagttgtgtcggcgtatcagtgt 55401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 4987222 - 4987326
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||     | ||||||||||| ||   ||||||||||||||||| |||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  273 tgtga 277  Q
    |||||    
T  4987322 tgtga 4987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 17276846 - 17276750
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgt 275  Q
    |||||||||||||||||| ||| ||||||| | ||| | ||||||||||||||||    |||||||||||| ||||||||||||||| || |||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc----accgacacgacactgacacttgtaattataccaaattatgt 17276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 14209243 - 14209137
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||| ||  ||||||| || ||||  ||||| |||     |||||||||||||||||||||| ||||||||||||||||||| |||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 14209144  T
Q  271 tatgtga 277  Q
    |||||||    
T  14209143 tatgtga 14209137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 14217021 - 14216920
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||| |||     ||||||||||||  ||||||||  |||||||||||||||||| ||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  272 at 273  Q
    ||    
T  14216921 at 14216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 14223150 - 14223049
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaatt 271  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||| |||     ||||||||||||  ||||||||  |||||||||||||||||| ||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  272 at 273  Q
    ||    
T  14223050 at 14223049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 8101892 - 8101955
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccga 239  Q
    |||||||||||| ||||||||| |||||| ||||| |||||||| |||||||||||||||||||    
T  8101892 ctatgaagcacgaacactcctcagattagacgtgtaccagtgtccgacacgtgtccgacaccga 8101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 11610636 - 11610578
Alignment:
Q  168 ctaatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  11610636 ctaataatctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 28918120 - 28918025
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||   |   |||||||  |||||||||||||||||| ||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgt-cgtgtc---cacgacaccgacacttgtaattacactgaattatgtga 28918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 34910435 - 34910341
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtg 276  Q
    ||||||||||||||||||||| |||||| |||||||| |||||       ||||||||||||| ||||||  ||| |||||||||||||| |||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtca------tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtg 34910342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 10955074 - 10955017
Alignment:
Q  176 ctatgaagcacggacactcctcc---gattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtc 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 20503585 - 20503530
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||    
T  20503585 tctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtc 20503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 25074919 - 25074864
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  25074919 atatgctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 25074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 40052431 - 40052380
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 40993275 - 40993346
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||||||     ||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 14832205 - 14832123
Alignment:
Q  200 attaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||| ||||||||||||||||     ||| |||||||||||| ||||||||||||||||| | | ||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtga 14832123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 28812645 - 28812539
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||| |||| |||||||||| ||||||||||||||   |||||||||     |||||| |||||| ||||||||  ||||||||||| |||||| |||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaat 28812546  T
Q  271 tatgtga 277  Q
    |||||||    
T  28812545 tatgtga 28812539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 14829821 - 14829713
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcgga------cacgtgtccgacaccgacacgacagtgacacttgtaattacactaa 268  Q
    |||| |||||||||||| ||||| ||||||||||||||| |||||| |      | ||||||| ||||||||||||||  |||||||||||||||  | |    
T  14829821 tctacgaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatga 14829722  T
Q  269 attatgtga 277  Q
    |||||||||    
T  14829721 attatgtga 14829713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 15999951 - 16000004
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtc 16000004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 25775624 - 25775557
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggac---acgtgtccgacaccgacac 242  Q
    |||||||||| ||||||||| ||||||||||||||  |||||||||   |||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacgacgtgtccgacaccgacac 25775557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 1509681 - 1509637
Alignment:
Q  181 aagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 18427070 - 18427014
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  18427070 ttctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtc 18427014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 1509614 - 1509563
Alignment:
Q  226 gtgtccgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||| |||||||| ||||||  |||||||||||||||||||||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga 1509563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 15796223 - 15796325
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||| |||||| |  |||||||||||| || |||| ||||||||||     |||||||| ||||||||  |||| ||||||||||||| |||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  271 tat 273  Q
    |||    
T  15796323 tat 15796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 21211413 - 21211363
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||  ||||||||| ||||||| ||||||||||||||||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacg 21211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 35223057 - 35223003
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||| ||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtc 35223003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 49651716 - 49651821
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||||||||| ||| ||||||| ||||||| |||||||| |     ||||||||   |||||||||||  |||||||||||||||| | |||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaat 49651814  T
Q  271 tatgtga 277  Q
    |||||||    
T  49651815 tatgtga 49651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 55213092 - 55212987
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||| |||||||| ||| ||  ||||| ||||||| | |||||||||||||||     ||||||||||||| |||  ||||||||||||| ||||||||    
T  55213092 ctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaat 55212994  T
Q  271 tatgtga 277  Q
    |||||||    
T  55212993 tatgtga 55212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 4466540 - 4466589
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||||||  || || ||||||||||||||||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacac 4466589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 8789489 - 8789541
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    ||||||||||||||||||||| ||||||||||||| | ||||| |||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgt 8789541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 8842449 - 8842413
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtc 211  Q
    ||||||||||||||||||||||| |||||||||||||    
T  8842449 tctatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 9800171 - 9800119
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgt 227  Q
    ||||||||||||||| || |||||||||||||||||||  ||||| |||||||    
T  9800171 tctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgt 9800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 14747625 - 14747548
Alignment:
Q  238 gacacgacagtgacacttgtaattacactaaattatgtgannnnnnncaaattattagatgtgtcggtgtatcagtgt 315  Q
    |||||||||  ||| |||||||||||||||||||||||||       ||||||||||| |||||||| || |||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgt 14747548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 21861698 - 21861658
Alignment:
Q  172 tattctatgaagcacggacactcctccgattaggcgtgtcc 212  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  21861698 tattctatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 24204983 - 24205051
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgaca 246  Q
    ||||||||||||||||||||  |||||||||||||  |||||||||||| ||| |   |||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacacgaca 24205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 3163966 - 3164021
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||| |||||||||| |||||||||||  |||||||||||| | ||||||||||||    
T  3163966 atatactatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacacg 3164021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 14223787 - 14223841
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||||||||    
T  14223787 tctataaagcacagaaactcctcagattaggcgtgtccca-tgtcggacacgtgtc 14223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 14979268 - 14979225
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    |||||||||||||||||||||| | ||||||||||||| |||||    
T  14979268 ctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 16789142 - 16789040
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||||||||||||||  |||||| ||||||| |||| |||||     | |||||||||| |||||||||   |||||| |||||||||| ||    
T  16789142 tctatgaagcacggacactcctcaaattaggtgtgtccc-gtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaa 16789044  T
Q  270 ttat 273  Q
    ||||    
T  16789043 ttat 16789040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 2408590 - 2408640
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||| ||||||  ||||||||||||||| |||||| |||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacacg 2408640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 10268487 - 10268521
Alignment:
Q  243 gacagtgacacttgtaattacactaaattatgtga 277  Q
    |||| ||||||||||||||||||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtga 10268521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 11252096 - 11252042
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt 229  Q
    |||||||||||| |||||||||| |||||||||||| ||  || |||||||||||    
T  11252096 tctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgt 11252042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 33359876 - 33359826
Alignment:
Q  174 ttctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||| ||||||||||||||||||| ||||| ||||||||  |||||||||    
T  33359876 ttctacgaagcacggacactcctccaattagacgtgtcccgatgtcggaca 33359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 52369906 - 52369856
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||||||||||||| || |||| ||||||| |||| |||||||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacg 52369856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 15864950 - 15864898
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||| |  ||||||||||||||| ||||| ||||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtccc-gtgtcagacacgtgtc 15864898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 32804485 - 32804538
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||||||||| |||||||||| |  ||||| |||||| |||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtc 32804538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    ||||||||||||||||||||  |||||||| |||||  |||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 3058 - 2952
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtcc-----gacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    ||||| |||||||||||||||| |||||||||||| || |||||| |||||||||      || |||||||||||| ||| |||||||||||||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaat 2959  T
Q  271 tatgtga 277  Q
    |||||||    
T  2958 tatgtga 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 8563 - 8670
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||     ||||||||| ||||||||||||  |||| ||||||||| ||  ||    
T  8563 tctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaa 8662  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  8663 ttatgtga 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 24155 - 24052
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-------gtgtccgacaccgacacgacagtgacacttgtaattacactaa 268  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||       ||||||||||||||||||||| ||| || ||||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacactaa 24058  T
Q  269 attatg 274  Q
    ||||||    
T  24057 attatg 24052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 4814 - 4875
Alignment:
Q  169 taatattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  4814 taataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 4875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 8720 - 8666
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtc 8666  T

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Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 23641 - 23535
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac-----gtgtccgacaccgacacgacagtgacacttgtaattacactaaat 270  Q
    |||||||||||  ||||| ||  ||||| |||||||||||| ||||||||     |||||||||||||| |||||| |||||||| |||||||||| |||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaat 23542  T
Q  271 tatgtga 277  Q
    |||||||    
T  23541 tatgtga 23535  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 14649 - 14592
Alignment:
Q  173 attctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||    
T  14649 attctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtc 14592  T

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Target: scaffold0475 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 3432 - 3384
Alignment:
Q  171 atattctatgaagcacggacactcctccgattaggcgtgtcccagtgtc 219  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  3432 atatcctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

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Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 8918 - 8863
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||    
T  8918 tctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtc 8863  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 263303 - 263406
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtcc-----gacaccgacacgacagtgacacttgtaattacactaaatta 272  Q
    ||||| |||||||||||||| |||||||||||||   || ||| |||||||||      ||||||||||||||| |||||||| |||||||||| |||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  273 tgtg 276  Q
    ||||    
T  263403 tgtg 263406  T

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Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 403 - 473
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccgacaccgacac 242  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||     ||||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 20239 - 20196
Alignment:
Q  234 caccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtga 20196  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 44453 - 44560
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgt-----ccgacaccgacacgacagtgacacttgtaattacactaaa 269  Q
    |||||||||||| |||||| ||| |||||  | ||||||||||||||||||||||     || |||||||||||| |  ||||| | |||||||||| ||    
T  44453 tctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaa 44552  T
Q  270 ttatgtga 277  Q
    ||||||||    
T  44553 ttatgtga 44560  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 53303 - 53204
Alignment:
Q  183 gcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc-----cgacaccgacacgacagtgacacttgtaattacactaaattatgtga 277  Q
    ||||||||||| ||  |||||  |||||||| ||||||||||||||||     ||||||||||||| ||  ||||||| |||||||||| ||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 4976 - 5030
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    ||||||||||| |||||||||| |||||||| |||| || |||||||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtc 5030  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 92940 - 92833
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca-----cgtgtccga----caccgacacgacagtgacacttgtaattacacta 267  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||||     |||||||||    |||| |||| | | |||||||||||||||||||     
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  268 aattatgt 275  Q
    ||||||||    
T  92840 aattatgt 92833  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 46776 - 46741
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtc 211  Q
    |||||||||||||||||||||| |||||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtc 46741  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 51946 - 51892
Alignment:
Q  172 tattctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||| |||| |||||||    
T  51946 tattttatgaagcatggacattcctcggattaggcgtgtcccggtgttggacacg 51892  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 2978 - 3032
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||| |  |||||||||||  |||||||||||| |||||    
T  2978 ctatgaagcacggacactccccatattaggcgtgtttcagtgtcggacatgtgtc 3032  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 135263 - 135313
Alignment:
Q  176 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacg 226  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 17541 - 17590
Alignment:
Q  175 tctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 224  Q
    ||||||||||||||| ||||  | ||||||||||||||| ||||||||||    
T  17541 tctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggaca 17590  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 17756 - 17784
Alignment:
Q  249 gacacttgtaattacactaaattatgtga 277  Q
    |||||||||||||||||||||||||||||    
T  17756 gacacttgtaattacactaaattatgtga 17784  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 13523 - 13471
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||  ||||||| |||||| |||||| ||| ||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtc 13471  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 21804 - 21856
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtc 230  Q
    |||||||||||||||||||  ||||||| |||||| |||||| ||| ||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtc 21856  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 32822 - 32774
Alignment:
Q  177 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacac 225  Q
    |||||||||| |||||||||| ||||| | ||||||| |||||||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacac 32774  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 225199 - 225267
Alignment:
Q  178 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacacgtgtccgacaccgacacgaca 246  Q
    ||||||||||||||||||||  |||||||||||||  |||||| ||||| ||| |   |||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacacgaca 225267  T

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