View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1202_low_48 (Length: 314)
Name: NF1202_low_48
Description: NF1202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1202_low_48 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 91 - 211
Target Start/End: Complemental strand, 10252276 - 10252156
Alignment:
| Q |
91 |
aacctgtgatctatgctactaagttatattgcctcttaaactaagtgctctctccattacgttttaccttagaatcaaatcatattttcagtagtccata |
190 |
Q |
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| T |
10252276 |
aacctttgatctatgctactaagttatattgcctcttaaactaagtgctctctccattacgttttaccttagaatcaaatcatattttcagtagtccata |
10252177 |
T |
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| Q |
191 |
tcatgaatagcatagaggggt |
211 |
Q |
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||||||||||||||||||||| |
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| T |
10252176 |
tcatgaatagcatagaggggt |
10252156 |
T |
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