View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12032_high_15 (Length: 261)
Name: NF12032_high_15
Description: NF12032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12032_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 31850835 - 31850604
Alignment:
| Q |
11 |
cagagacttcaaagttgaaaccatgtggagcactataatgaacaggaaaagtgttggcaaaaatttgagctgaagaaccaaatgttttggaggcacgcca |
110 |
Q |
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| T |
31850835 |
cagagacttcaaagttgaaaccatgtggagcactataatgaacaggaaaagtgttggcaaaaatttgagctgaagaaccaaatgttttggagccacgcca |
31850736 |
T |
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| Q |
111 |
aataacttcaagtgatttatcactttttcgcttagctctgtcttgataatcaattctagcaaagtgtacagaatcaaatccaagctgcaaaggtaaataa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31850735 |
aataacttcaagtgatttatcactttttcgcttagctctgtcttgataatcaattctagcaaagtgtacagaatcaaatccaagctgcaaaggtaaataa |
31850636 |
T |
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| Q |
211 |
aatgagagtattcaattttactatgttttact |
242 |
Q |
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|||||| ||||||||||||||||||||||||| |
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| T |
31850635 |
aatgagtgtattcaattttactatgttttact |
31850604 |
T |
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